BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047648
         (537 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/529 (62%), Positives = 404/529 (76%), Gaps = 32/529 (6%)

Query: 32  VILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVK 91
           ++ QL NS ADP LILRYF WS KE + SHSL LT R+L+SL   KKY KIRSFL  FVK
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVK 60

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
             K  SVS IFHA+S   DS C NSI+ DML+LA+V+N+K   GFEAFKRAGDYG K S+
Sbjct: 61  YEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSL 120

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           +SCN LL  LVKE +  D+E+VY+EM +R+IELN+ SFN V+NGLCK GKLN+A D++ED
Sbjct: 121 ISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIED 180

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  GVSP V+TYN LIDGYCK G IGKMYKADA+ K+MV  GI PNEVT+N LIDGFCK
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           DEN+S AM+VF EM   G+   VVTYN LINGLC DGK+DEAVALRD+M++S L+PNVVT
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LINGFCK K V +A  LF+D+ +QG+ P+ +TY TLIDAYCK+GRMEDAFA+ N M+
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           DRG+ P+VSTYNCLIAGL R+G+V+  R++MNE+V+  + A +VTYNIL+ +LCK G+S+
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESR 420

Query: 452 KAVSLLDEMF--------------------------------KMEKEKKWPNIVTYNVLI 479
           KAV LLDEMF                                +ME++ K  N+VT+NVLI
Sbjct: 421 KAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLI 480

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           KGFC KG+LEDANGLLNE+LE+GL+PN+TTY+I++EEMMEKGF+PDIEG
Sbjct: 481 KGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/581 (58%), Positives = 415/581 (71%), Gaps = 47/581 (8%)

Query: 1   PFCSANSTIED----------ITELIRNHHWSKLKN----TDPNTVILQLFNS-DADPVL 45
           PFC+ N T             I++LI    WS LK+      P   + QL  S D DP+L
Sbjct: 30  PFCTYNPTCTAPISNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLL 89

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           +LRYF WS +EL  ++S+ L  RLL+ L  AK YPKIRS L  FVK     S+S IFH+L
Sbjct: 90  VLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSL 149

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S CS   C NSII DML+LAYV+N K  LG EAFKRAGDY  K SVLSCN LL ALVKE 
Sbjct: 150 SVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKEN 209

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +F  VE+VYKEM RR+I  NL +FN V+NGLCK GKLNKA D+++DMK  G  P VVTYN
Sbjct: 210 EFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYN 269

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LIDGYCK G +GKMYKADA+ K+MVEN + PN VTFN LIDGFCKDEN+SAA+KVFEEM
Sbjct: 270 TLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM 329

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            S G+   VVTYNSL+NGLC +GKL+EA  L DEM++S LKPNV+T NALING+CKKKL+
Sbjct: 330 QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLL 389

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           E+AR LFD+I +QGL+P+VIT+NTL+  YCK G+ME+AF ++  ML++G LP+ STYNCL
Sbjct: 390 EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF---- 461
           I G  REG +E V+N++NE+   G++A  VTYNIL+ A C+  + KKA  L+DEM     
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 462 ----------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
                                       +MEKE +W N+VTYNVLI+G+C+KGKLEDANG
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           LLNE+LEKGLIPN+TTY+I++EEMMEKGF+PDIEGH+Y+ S
Sbjct: 570 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHAS 610


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/551 (60%), Positives = 411/551 (74%), Gaps = 18/551 (3%)

Query: 1   PFCSANST----------IEDITELIRNHHWSKLKN----TDPNTVILQLFNSDADPVLI 46
           PF S NST             I++LI   HWSKLK     T+P++++  LFNS+A P LI
Sbjct: 31  PFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLI 90

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           L YF W+ KE  A H++    RLLH L  AK Y KIR+ L  F KN  +++ STIFH+LS
Sbjct: 91  LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN-STIFHSLS 149

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
                 C NSII+DML+ AYVKN +  L  E F RAGDYG + S LSCN +L +LVKEG+
Sbjct: 150 VLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGR 209

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
              VE VYKEM RRRI +N+ +F+ V+NGLCK GK  KA D++EDMK+ G SP V+TYN 
Sbjct: 210 IGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT 269

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +IDGYCK G   KM+KADA+ K+MV   I PNE+TFN LIDGFC+DEN++AA KVFEEM 
Sbjct: 270 IIDGYCKAG---KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   VVTYNSLINGLC +GKLDEA+ L+D+M   GLKPNVVT NALINGFCKKK+++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +AR + DDI ++GL+P+VIT+NTLIDAY K GRM+DAF +R+ MLD GV P+VSTYNCLI
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  REGNV+  R +  E+  NG++A LVTYNILV ALCK G+++KAV LLDEM  MEK+
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            +  NIVTYNVLIKGFC KGKLE+AN LLNE+LEKGLIPN+TTY I+R+EMMEKGFIPDI
Sbjct: 507 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDI 566

Query: 527 EGHMYNISGTS 537
           +GH+YN+S +S
Sbjct: 567 DGHLYNVSISS 577


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/566 (57%), Positives = 411/566 (72%), Gaps = 37/566 (6%)

Query: 8   TIEDITELIRNHHWSKLKN----TDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSL 63
           +I  I+EL+   HWS+LK     T P T + QL N+  D  L+LR+F WS KE R S+ L
Sbjct: 19  SIPTISELLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGL 78

Query: 64  LLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
             T ++LH L  +K+Y K+RSFL  FVKN K T VS++FH+L          ++IIDML+
Sbjct: 79  EPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHT-VSSVFHSLLLDGGRPGATALIIDMLV 137

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           LAYVKN++ H  +EAF RA DYG K S+ SCN LL ALVKE K  DVEYVYKEM +RRI 
Sbjct: 138 LAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIH 197

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            NL++FN  +NGLC+AGKLNKA D +EDMK+ G+SP VVTYN L+DGYCK+G  GKMYKA
Sbjct: 198 TNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA 257

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           +A  K+M+ N I PNEVTFNTLIDGFCKDEN++AA K FEEM   G+   +VTYNSLING
Sbjct: 258 EAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC +GKL+EA+ L D+M+  GLKPN+VT NALINGFCKKK++++A  +FDD+S+Q L P+
Sbjct: 318 LCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN 377

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           VIT+NT+IDAYCKEG ME+ F++ +SMLD G+LP+VSTYNCLIAGL R+ +++  + ++N
Sbjct: 378 VITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLN 437

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF---------------------- 461
           E+ N G++  +VTYNIL+  LCK+ KS+ A  LL+EMF                      
Sbjct: 438 EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 497

Query: 462 ----------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                     +MEKE+K PN+VTYNVLIKG+C+  KLE ANGLLNE+LEKGL PN+TTY 
Sbjct: 498 KLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557

Query: 512 IVREEMMEKGFIPDIEGHMYNISGTS 537
           IVR EM+EKGF PDIEGH+YNIS  S
Sbjct: 558 IVRLEMLEKGFSPDIEGHLYNISSMS 583


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/583 (57%), Positives = 413/583 (70%), Gaps = 50/583 (8%)

Query: 1   PFCSANST----------IEDITELIRNHHWSKLKN----TDPNTVILQLFNSDADPVLI 46
           PF S NST             I++LI   HWSKLK     T+P++++  LFNS+A P LI
Sbjct: 31  PFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLI 90

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           L YF W+ KE  A H++    RLLH L  AK Y KIR+ L  F KN  +++ STIFH+LS
Sbjct: 91  LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN-STIFHSLS 149

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
                 C NSII+DML+ AYVKN +  L  E F RAGDYG + S LSCN +L +LVKEG+
Sbjct: 150 VLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGR 209

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
              VE VYKEM RRRI +N+ +F+ V+NGLCK GK  KA D++EDMK+ G SP V+TYN 
Sbjct: 210 IGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT 269

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +IDGYCK G   KM+KADA+ K+MV   I PNE+TFN LIDGFC+DEN++AA KVFEEM 
Sbjct: 270 IIDGYCKAG---KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   VVTYNSLINGLC +GKLDEA+ L+D+M   GLKPNVVT NALINGFCKKK+++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +AR + DDI ++GL+P+VIT+NTLIDAY K GRM+DAF +R+ MLD GV P+VSTYNCLI
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---- 462
            G  REGNV+  R +  E+  NG++A LVTYNILV ALCK G+++KAV LLDEMF+    
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506

Query: 463 ----------------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
                                       MEK+ +  NIVTYNVLIKGFC KGKLE+AN L
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           LNE+LEKGLIPN+TTY I+R+EMMEKGFIPDI+GH+YN+S +S
Sbjct: 567 LNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVSISS 609


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/566 (57%), Positives = 403/566 (71%), Gaps = 37/566 (6%)

Query: 8   TIEDITELIRNHHWSKLK----NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSL 63
           +I  I+EL+ N HWS+LK     T P   + QLFN+  D  L+LR+F WS KE R S+ L
Sbjct: 19  SISTISELLSNQHWSELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGL 78

Query: 64  LLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
             TG++LH L  +KKY K+RSFL   VKN K T VS++FH+L    D  C N++I DML+
Sbjct: 79  ETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHT-VSSVFHSLLLGGDRPCANALITDMLV 137

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           LAYV N++ H   E F+R  DYG K S+ SCN LL ALVK  +  +++YVYKEM +RRI+
Sbjct: 138 LAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQ 197

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            NL +FN  +NGLCKAGKLNKA D++ED+K+ G SP +VTYN LIDG+CKKG  GKMY+A
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           DA+ K+M+ N I PNE+TFNTLIDGFCKDEN+ AA   FEEM   G+   +VTYNSLING
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           L  +GKLDEA+AL D+M+  GLKPN+VT NALINGFCKKK++++AR LFDDI+EQ L P+
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            IT+NT+IDA+CK G ME+ FA+ NSMLD G+ P+VSTYNCLIAGL R  NV   + ++N
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN 437

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF---------------------- 461
           E+ N  ++A +VTYNIL+G  CKDG+  KA  LL EM                       
Sbjct: 438 EMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG 497

Query: 462 ----------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                     +MEKE K  N+VTYNVLIKGFC+ GKLEDAN LLNE+LEKGL PN+TTY 
Sbjct: 498 NLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557

Query: 512 IVREEMMEKGFIPDIEGHMYNISGTS 537
           +VR EM+EKGFIPDIEGH+YNIS  S
Sbjct: 558 VVRLEMLEKGFIPDIEGHLYNISSMS 583


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 301/584 (51%), Positives = 398/584 (68%), Gaps = 50/584 (8%)

Query: 2   FCSANSTIED-----------ITELIRNHHWSKL----KNTDPNTVILQLFNSDADPVLI 46
            CS++STI             I +LI   HWSKL     + +PN +  QL +S+ DP L 
Sbjct: 25  LCSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLC 84

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           LRY+ W  K    S SL LT +LLHSL  AK+Y KIRSFL  FV+NG    V +IFHA+S
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            C D++C NSII DML+LAY  N +  LGFEAFKR+G YG K S LSC  L+ AL+KE +
Sbjct: 145 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             DVEYVYKEM RR+I+ N+ +FN V+N LCK GK+NKA D+MEDMK  G SP VV+YN 
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LIDGYCK GG GKMYKADAV K+MVEN + PN  TFN LIDGF KD+N+  +MKVF+EM 
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   V++YNSLINGLC  GK+ EA+++RD+M+++G++PN++T NALINGFCK  +++
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F  +  QG  P+   YN LIDAYCK G+++D FA++  M   G++PDV TYNCLI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---- 462
           AGL R GN+E  + + ++L + G+   LVT++IL+   C+ G+S+KA  LL EM K    
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502

Query: 463 ----------------------------MEKEKKWP-NIVTYNVLIKGFCQKGKLEDANG 493
                                       MEKE++   N+ +YNVL++G+ QKGKLEDAN 
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           LLNE+LEKGL+PN+ TY+IV+EEM+++GF+PDIEGH++N+S  S
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 295/572 (51%), Positives = 394/572 (68%), Gaps = 39/572 (6%)

Query: 3   CSANSTIEDITELIRNHHWSKL----KNTDPNTVILQLFNSDADPVLILRYFCWSTKELR 58
           C     +  I +LI   HWSKL    K+ +PN +  QL +S+ +P L LRY+ W  K   
Sbjct: 37  CPPRFDVAVIADLIEKQHWSKLGFHVKDINPNELFRQLISSELNPDLCLRYYTWLVKNRD 96

Query: 59  ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII 118
            S SL LT +LLHSL  AK+Y KIRSFL  FV+NG    V +IFHA+S C D++C NSII
Sbjct: 97  ISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMC-DNVCVNSII 155

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            DML+LAY  N +  LGFEAFKR+G YG K S +SC  L+ AL+K+ +  DVEY+YKEM 
Sbjct: 156 ADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMI 215

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           RR+I+ N+ +FN V+N LCK GK+NKA D+MEDMK  G SP VV+YN LIDGYCK GG G
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNG 275

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           KMYKADAV K+MVEN + PN  TFN LIDGF KD+N+  ++KVF+EM    +   V+TYN
Sbjct: 276 KMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYN 335

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           SLINGLC  GK++EA+ +RD+M+++G++PN++T ++LINGFCK  ++++A  +FD +  Q
Sbjct: 336 SLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQ 395

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+   YN LIDAYCK G+++D FA++  M   G++PDV TYNCLIAGL R GN+E  
Sbjct: 396 GTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---------------- 462
           + + ++L N G+   LVT++IL+   C  G+S+KA  LL EM K                
Sbjct: 456 KKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514

Query: 463 ----------------MEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                           MEKE++   N+ +YNVL++G+ QKGKLEDAN LLNE+LEKGL+P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           N+ TY+IV+EEM++KGF+PDIEGH++N+S  S
Sbjct: 575 NRITYEIVKEEMVDKGFVPDIEGHLFNVSTKS 606


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 284/465 (61%), Positives = 347/465 (74%), Gaps = 32/465 (6%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS   DS C NSII+D+L+ AY KN++  LGFEAFKRA DYGLK SV SCN L+  LVK 
Sbjct: 82  LSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKV 141

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+  D+E+VYKEM RRRIE  L SFN V+NGLCK GKLNKA DI+EDMK  GVS  V+TY
Sbjct: 142 GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITY 201

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LIDGYCK G IGKMYKADA+ K+M  +GI PNEVTFN LIDGFCKD+N+SAAMKVF E
Sbjct: 202 NTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAE 261

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+   VVTYNSLINGLC +GK++EA ALRD+M+ S LKPN++T NAL+NGFCK K+
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKM 321

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V++A  LFDD+ +QG++P+V TYN LIDAYCK+  MEDAFA+   ML +GV PDVSTYNC
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-- 462
           LIAGL R+G++E  RN+++E+    ++A L+TYNIL+ +LC  G+ KKA+ LLDEM +  
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441

Query: 463 ------------------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
                                         MEK  +  N+ TYNVLIKGFC+K KLEDAN
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           GLLNE+LEKGLIPN+ TY+IV EEMMEKGF+PDIEGH+Y ++ +S
Sbjct: 502 GLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAVSS 546


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 304/484 (62%), Gaps = 40/484 (8%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           +P +RS LH      +  S ++I  AL   S  L     I D+L+LA     +P   +EA
Sbjct: 82  HPLLRSELHALAA-ARLHSPASIVRALPASSSPL-----IADLLVLALASASQPLASYEA 135

Query: 139 FKRAGDYGLK--SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           F  AGD   +   S  S N+LL ALV   + +  E  +K   RRR+  +L +FN V++GL
Sbjct: 136 FLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGL 195

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+L KA D+ +D+++ G++P VVTYN +IDGYCK+G  G+MY  DA+ K+MVE GI 
Sbjct: 196 CKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGIS 255

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PNEVTFN L++G+CKD N +AA++VFEEM   GIAA VVTY++L+ GLC +GK++E V L
Sbjct: 256 PNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKL 315

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM   GL PN+ T N+++NGFCKK ++  A    D + ++ + P+V+TY  L+D Y +
Sbjct: 316 VDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRR 375

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             +M+DA A++ +M  +GV P+   YNCLIAG +R G+   V  +++E+   G+RA +VT
Sbjct: 376 LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVT 435

Query: 437 YNILVGALCKDGKSKKAVSLLDEMF--------------------------------KME 464
           YN+L+GALC  G+ +KAV LLDEM                                 +ME
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           K KK  N+VTYNV IK  C+ GK+E+ N LLNE+LEKGL+PN  TY  ++E MMEKG+ P
Sbjct: 496 KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTP 555

Query: 525 DIEG 528
           D+ G
Sbjct: 556 DVRG 559


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/512 (43%), Positives = 314/512 (61%), Gaps = 36/512 (7%)

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
           WS    RA   L L G LL  L     YP +RS LH+     +  S ++I  AL + S S
Sbjct: 55  WSRAHFRAPLPLRLHGLLLARLASKGLYPLLRSELHVLAA-ARLHSPASILRALPSPSAS 113

Query: 112 LCRNS-IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK--SSVLSCNQLLRALVKEGKFE 168
              ++ +I DML+LA  +  +P   ++AF  AG+   +   S  S N LL  LV   + +
Sbjct: 114 ASASTPLIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVD 173

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
             E  ++   RRR+  ++ +FN V++GLC+ G+L KA D+ +D+K+ G++P V TYN LI
Sbjct: 174 LAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLI 233

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCKKGG G MY  D + K+MVE GI P  VTF  LI+G+CK+ N +AA++VFEEM   
Sbjct: 234 DGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ 293

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GIAA VVTYNSLI+GLC +GK++E V L +EM   GL PN +T   ++ GFCKK ++  A
Sbjct: 294 GIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
               D ++E+ + P V+ YN LID Y + G+MEDA A++ +M  +G+ P+V+TYNCLI G
Sbjct: 354 NDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITG 413

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------- 460
            SR G+      +++E+   G+ A +VTYN+L+GALC  G+ +KAV LLDEM        
Sbjct: 414 FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473

Query: 461 ------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
                                    +MEK +K  N+VTYNV IK FCQ GK+++AN LLN
Sbjct: 474 HLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLN 533

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           E+L+K L+PN  TY+ ++E MMEKG+ PDI G
Sbjct: 534 EMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/512 (43%), Positives = 314/512 (61%), Gaps = 36/512 (7%)

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
           WS    RA   L L G LL  L     YP +RS LH+     +  S ++I  AL + S S
Sbjct: 55  WSRAHFRAPLPLRLHGLLLARLASKGLYPLLRSELHVLAA-ARLHSPASILRALPSPSAS 113

Query: 112 LCRNS-IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK--SSVLSCNQLLRALVKEGKFE 168
              ++ +I DML+LA  +  +P   ++AF  AG+   +   S  S N LL  LV   + +
Sbjct: 114 ASASTPLIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVD 173

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
             E  ++   RRR+  ++ +FN V++GLC+ G+L KA D+ +D+K+ G++P V TYN LI
Sbjct: 174 LAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLI 233

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCKKGG G MY  D + K+MVE GI P  VTF  LI+G+CK+ N +AA++VFEEM   
Sbjct: 234 DGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ 293

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GIAA VVTYNSLI+GLC +GK++E V L +EM   GL PN +T   ++ GFCKK ++  A
Sbjct: 294 GIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
               D ++E+ + P V+ YN LID Y + G+MEDA A++ +M  +G+ P+V+TYNCLI G
Sbjct: 354 NDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITG 413

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------- 460
            SR G+      +++E+   G+ A +VTYN+L+GALC  G+ +KAV LLDEM        
Sbjct: 414 FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473

Query: 461 ------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
                                    +MEK +K  N+VTYNV IK FCQ GK+++AN LLN
Sbjct: 474 HLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLN 533

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           E+L+K L+PN  TY+ ++E MMEKG+ PDI G
Sbjct: 534 EMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/512 (43%), Positives = 313/512 (61%), Gaps = 36/512 (7%)

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
           WS    RA   L L G LL  L     YP +RS LH+     +  S ++I  AL + S S
Sbjct: 55  WSRAHFRAPLPLRLHGLLLARLASKGLYPLLRSELHVLAA-ARLHSPASILRALPSPSAS 113

Query: 112 LCRNS-IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK--SSVLSCNQLLRALVKEGKFE 168
              ++ +I DML+LA  +  +P   ++AF  AG+   +   S  S N LL  LV   + +
Sbjct: 114 ASASTPLIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVD 173

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
             E  ++   RRR+  ++ +FN V++GLC+ G+L KA D+ +D+K+ G++P V TYN LI
Sbjct: 174 LAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLI 233

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCKKGG G MY  D + K+MVE GI P  VTF  LI+G+CK+ N +AA++VFEEM   
Sbjct: 234 DGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ 293

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GIAA VVTYNSLI+GLC +GK++E V L +EM   GL PN +T   ++ GFCKK ++  A
Sbjct: 294 GIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
               D ++E+ + P V+ Y  LID Y + G+MEDA A++ +M  +G+ P+V+TYNCLI G
Sbjct: 354 NDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITG 413

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------- 460
            SR G+      +++E+   G+ A +VTYN+L+GALC  G+ +KAV LLDEM        
Sbjct: 414 FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473

Query: 461 ------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
                                    +MEK +K  N+VTYNV IK FCQ GK+++AN LLN
Sbjct: 474 HLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLN 533

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           E+L+K L+PN  TY+ ++E MMEKG+ PDI G
Sbjct: 534 EMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/548 (41%), Positives = 326/548 (59%), Gaps = 61/548 (11%)

Query: 33  ILQLFNSDADPVLILRYFC---WSTKELRASH---------SLLLTGRLLHSLVVAKKYP 80
           +L L    + P  + R      WS    RA           + L +G  LHSL       
Sbjct: 35  VLHLLLRTSPPPPLPRLVALARWSRAHFRAPLPLRLHTLLLARLASGGGLHSL------- 87

Query: 81  KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
            +RS LH     G+  S ++I  AL   S  L     + DML+LA  +  +P   + AF 
Sbjct: 88  -LRSELHALAA-GRLHSPASILRALPASSRPL-----VADMLVLALARASQPLAAYGAFL 140

Query: 141 RAG-DYG-LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            AG DY   + S  S N LL ALV+  + +  E  ++   RRR+  +  +FN V++GLCK
Sbjct: 141 LAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCK 200

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+L KA D+ +DM+  G+ P VVTYN LIDGY K G  GKMY  D + K+M + GI PN
Sbjct: 201 TGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPN 260

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VTFN LI+G+CK+ NI+AA+KVFEEM  HGI A +VTY SL++GLC +GK+++++ L +
Sbjct: 261 VVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVE 320

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   GL   + T N+++NGFCKK ++ +A    D ++++G+ P+V+TYNTLID Y + G
Sbjct: 321 EMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLG 379

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +M++A A + +M  +G+ PDV TYNCLI G +   +   V  +++E+   G++A LVTYN
Sbjct: 380 KMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYN 439

Query: 439 ILVGALCKDGKSKKAVSLLDEM--------------------------------FKMEKE 466
           +L+GALC  G+ +KAV LLDEM                                 +MEK 
Sbjct: 440 VLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKC 499

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           KK  N+VT NV +K FC+ GK+++AN +LNE+LEKGL+PN+ TY+I+   M+EKG++PDI
Sbjct: 500 KKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559

Query: 527 EGHMYNIS 534
            G+  ++S
Sbjct: 560 RGYAADVS 567



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 172/314 (54%), Gaps = 4/314 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  ++L+  Y K        + F+    +G+ +++++   L+  L +EGK ED   + 
Sbjct: 260 NVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLV 319

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM+   +   L + N VLNG CK G + +A   ++ M   G+ P VVTYN LIDGY + 
Sbjct: 320 EEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQR- 377

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +GKM +A A    M   GI P+  T+N LI GF    +  +   + +EM   G+ A +
Sbjct: 378 --LGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADL 435

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN LI  LC  G++ +AV L DEM+  GL+P   T NA+INGFC+K   + A  +   
Sbjct: 436 VTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIR 495

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + +     +V+T N  +  +CK G+M++A  + N ML++G++P+  TY  + +G+  +G 
Sbjct: 496 MEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGY 555

Query: 415 VEGVRNIMNELVNN 428
           V  +R    ++  N
Sbjct: 556 VPDIRGYAADVSKN 569


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/499 (42%), Positives = 318/499 (63%), Gaps = 48/499 (9%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           LHSL        +RS LH+    G+  S ++I  AL   S  L     + DML+LA  + 
Sbjct: 84  LHSL--------LRSELHVLAA-GRLHSPASILRALPASSGPL-----VADMLVLALARA 129

Query: 130 MKPHLGFEAFKRAGD--YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            +P   +EAF  AG      + S  S N LL ALV+  + +  +  ++   RRR+  +L 
Sbjct: 130 SQPLAAYEAFLLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLF 189

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +FN V++G CK G+L KA D+ +++ + GV+P V TYN LIDGYCK+G +GKMY  DA+ 
Sbjct: 190 TFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALL 249

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K+M++ GI P+ VTFN LI+G+CK+ NI+AA+KVF+EM   GI A VVTYNSL++GLC +
Sbjct: 250 KEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCRE 309

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK+++++ L +EM   GL   + T N+++NGFCKK ++ +A    D I+++G+ P+VITY
Sbjct: 310 GKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITY 369

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NTL+D Y + G+M++A A +++M  +G+ P+V TYNCLI G +   +   V  +++E+  
Sbjct: 370 NTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKE 429

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------------------------- 460
            G++A +VTYN+L+GALC  G+ +KAV LLDEM                           
Sbjct: 430 KGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQG 489

Query: 461 -----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
                 +MEK KK  N+VTYNV +K FC+ GK+++AN +LNE+LEKGL+PN+ TY+I+  
Sbjct: 490 AHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINS 549

Query: 516 EMMEKGFIPDIEGHMYNIS 534
            M+EKG++PDI G+  ++S
Sbjct: 550 GMIEKGYVPDISGYAADVS 568



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 171/312 (54%), Gaps = 3/312 (0%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  ++L+  Y K        + F+     G+ ++V++ N L+  L +EGK ED   + +E
Sbjct: 262 VTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEE 321

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M+   +   L + N VLNG CK G + +A   ++ +   G+ P V+TYN L+DGY +   
Sbjct: 322 MEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRR--- 378

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +GKM +A A    M   GI PN  T+N LI GF    +  +   + +EM   G+ A VVT
Sbjct: 379 LGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVT 438

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI  LC  G++ +AV L DEM+  GL+P  V  N +INGFC+K   + A  +   + 
Sbjct: 439 YNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRME 498

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++    +V+TYN  +  +CK G+M++A  + N ML++G++P+  TY  + +G+  +G V 
Sbjct: 499 KRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVP 558

Query: 417 GVRNIMNELVNN 428
            +     ++  N
Sbjct: 559 DISGYAADVSKN 570


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  369 bits (947), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 216/496 (43%), Positives = 290/496 (58%), Gaps = 86/496 (17%)

Query: 1   PFCSANST---IEDITELIRNHHWSKLK----NTDPNTVILQLFNSDADPVLILRYFCWS 53
           PF   NS+   I D+ +LI   +WS+LK    +T+P  ++ QL  S AD  L LRYF WS
Sbjct: 26  PFSRFNSSCVNIPDVVDLIAKQYWSELKTHLKSTNPIALLHQLLTSGADSDLTLRYFTWS 85

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
            KEL+ SHSL LT R+LHSL  AKKY KIRSFL   V+N K   VS I            
Sbjct: 86  QKELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFI------------ 133

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
                                 F A   +GD    +S++                D+  V
Sbjct: 134 ----------------------FHAISVSGDSFCANSIIV---------------DI-LV 155

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + + K  +  L  ++F              +ASD        G+   V + N L+     
Sbjct: 156 WADAKNLKTRLGFEAFK-------------RASD-------YGLKLSVTSCNPLM----- 190

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             G+ KMYKADA+ K+M  +GI PNEVTFN LIDGFC D+N+S AMKVF EM   G+   
Sbjct: 191 -SGLVKMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPN 249

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTYNSLINGLC +GK++EA  LRD+M+ S L+PN++T NAL+NGFCK K+V++A  LF+
Sbjct: 250 VVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFE 309

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           D+ +Q ++P+V TYN LIDAYCK+  MEDAFA+   ML +GV PDVSTYNCLI GL R+G
Sbjct: 310 DMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKG 369

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           ++EG RN ++E+    ++A L+TYNIL+ +LC  G+ KK + LLDEM K   +   P+ +
Sbjct: 370 DLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLK---PSQL 426

Query: 474 TYNVLIKGFCQKGKLE 489
           TYN +I G+ ++G L 
Sbjct: 427 TYNTMIDGYSKEGNLR 442



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 8/285 (2%)

Query: 239 KMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           K Y    +F  +  +G     N +  + L+    K+       + F+    +G+   V +
Sbjct: 126 KNYPVSFIFHAISVSGDSFCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTS 185

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            N L++GL    K+ +A A+  EM A G+ PN VT N LI+GFC  K V  A  +F +++
Sbjct: 186 CNPLMSGLV---KMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMN 242

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            QG+ P+V+TYN+LI+  C  G++ +A  +R+ M++  + P++ T+N L+ G  +   V+
Sbjct: 243 RQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVK 302

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +  ++    +   + TYNIL+ A CKD   + A +L   M     +  +P++ TYN
Sbjct: 303 QAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLG---KGVYPDVSTYN 359

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            LI G C+KG LE A   ++E+  K L  +  TY I+ + +  KG
Sbjct: 360 CLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKG 404



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 9/211 (4%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLK +V + N L++G  K   + KA  +  ++   G+ P+ +T+N LID +C +  +  A
Sbjct: 178 GLKLSVTSCNPLMSGLVK---MYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVA 234

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  +GV P+V TYN LI GL   G V     + +++VN+ +   ++T+N L+  
Sbjct: 235 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNG 294

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK+   K+A  L ++M    K++  PN+ TYN+LI  +C+   +EDA  L   +L KG+
Sbjct: 295 FCKNKMVKQAGELFEDM---PKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGV 351

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
            P+ +TY  +   +  KG   D+EG    +S
Sbjct: 352 YPDVSTYNCLIVGLCRKG---DLEGARNRVS 379


>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
 gi|194696880|gb|ACF82524.1| unknown [Zea mays]
 gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 421

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/418 (39%), Positives = 259/418 (61%), Gaps = 7/418 (1%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGD--YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ML+LA  +  +P   +EAF  AG      + S  S N LL ALV+  + +  +  ++   
Sbjct: 1   MLVLALARASQPLAAYEAFLLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAAL 60

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           RRR+  +L +FN V++G CK G+L KA D+ +++ + GV+P V TYN LIDGYCK+G +G
Sbjct: 61  RRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVG 120

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGF--CKDENISAAMKVFEEMGSHGIAAGVVT 296
           KMY  DA+ K+M++ GI P+ VTFN LI+G+  C++  +  ++K+ EEM   G+A  + T
Sbjct: 121 KMYHVDALLKEMIQAGISPDVVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILST 180

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            NS++NG C  G + EA    D +   G+KPNV+T N L++G+ +   +++A    D ++
Sbjct: 181 MNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMA 240

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +G+SP+V TYN LI  +           + + M ++GV  DV TYN LI  L  +G V 
Sbjct: 241 GKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVR 300

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +++E+V  G+    V YN ++   C+ G ++ A  +     +MEK KK  N+VTYN
Sbjct: 301 KAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEI---RLRMEKRKKRANVVTYN 357

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           V +K FC+ GK+++AN +LNE+LEKGL+PN+ TY+I+   M+EKG++PDI G+  ++S
Sbjct: 358 VFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVS 415



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 159/285 (55%), Gaps = 5/285 (1%)

Query: 146 GLKSSVLSCNQLLRA--LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           G+   V++ N L+    L +EGK ED   + +EM+   +   L + N VLNG CK G + 
Sbjct: 136 GISPDVVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMV 195

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A   ++ +   G+ P V+TYN L+DGY +   +GKM +A A    M   GI PN  T+N
Sbjct: 196 EAEGWVDGIAQRGMKPNVITYNTLVDGYRR---LGKMKEAAAAKDAMAGKGISPNVKTYN 252

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI GF    +  +   + +EM   G+ A VVTYN LI  LC  G++ +AV L DEM+  
Sbjct: 253 CLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEV 312

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P  V  N +INGFC+K   + A  +   + ++    +V+TYN  +  +CK G+M++A
Sbjct: 313 GLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEA 372

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
             + N ML++G++P+  TY  + +G+  +G V  +     ++  N
Sbjct: 373 NVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVSKN 417


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  287 bits (735), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 277/534 (51%), Gaps = 36/534 (6%)

Query: 17  RNHHWSKLKNTD----PNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           R+  W  +K  +    P+ +   L N    P ++L +      +L  + +L L      +
Sbjct: 50  RSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCL------A 103

Query: 73  LVVAKKYPKIRSFLHMFVK---NGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVK 128
           +V+  + P  +  LH+  +    G   S+  IF  L+   D L  ++SI+ D L+ +   
Sbjct: 104 IVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCD 163

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             +    FE F    + G+  ++ +CN LL   +K  + E    +Y EM R RI+ ++ +
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++N LCK GKL KA D +  M++ GV P +VTYN ++ GYC     G++  ADA+  
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS---GRVEAADAILT 280

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M    I P+  T+ +LI G CK   +  A K+FEEM   G+    V YN+LI+G C  G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LD A A +DEM+  G+ P + T N+LI+    ++  ++A  +  +I E+G+SP  ITYN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+ YC+    + AF + + ML  G+ P   TY  L+  LS++  ++   ++  ++ + 
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   ++ +N L+   C +   K A  LL +M +M   K  P+ VT+N +++G C++GK+
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRM---KVPPDEVTFNTIMQGHCREGKV 517

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           E+A  L +E+  +G+ P+  ++                  VR EM++ GF P +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 74/382 (19%)

Query: 139 FKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
            K+A D+       G+K ++++ N ++      G+ E  + +   MKR++IE +  ++  
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYK------- 242
           +++G+CK G+L +AS I E+M   G+ P  V YN LIDG+C KG +     YK       
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 243 -----------------------ADAVFKDMVENGILPNEVTFNTLIDGFCK-------- 271
                                  A+ + K++ E GI P+ +T+N LI+G+C+        
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 272 ---DENISAAMK------------------------VFEEMGSHGIAAGVVTYNSLINGL 304
              DE +++ +K                        +F+++ S G+   V+ +N+LI+G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGH 476

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +  +  A  L  +M    + P+ VT N ++ G C++  VE+AR LFD++  +G+ P  
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I++NTLI  Y + G ++DAF +RN MLD G  P V TYN L+ GL +    +    ++ E
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 425 LVNNGMRAGLVTYNILVGALCK 446
           +V+ GM     TY  L+  + K
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAK 618


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 276/534 (51%), Gaps = 36/534 (6%)

Query: 17  RNHHWSKLKNTD----PNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           R+  W  +K  +    P+ +   L N    P ++L +      +L  + +L L      +
Sbjct: 50  RSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCL------A 103

Query: 73  LVVAKKYPKIRSFLHMFVK---NGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVK 128
           +V+  + P  +  LH+  +    G   S+  IF  L+   D L  ++SI+ D L+ +   
Sbjct: 104 IVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCD 163

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             +    FE F    + G+  ++ +CN LL   +K  + E    +Y EM R RI+ ++ +
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++N LCK GKL KA D +  M++ GV P +VTYN ++ GYC  G   ++  ADA+  
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG---RVEAADAILT 280

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M    I P+  T+ +LI G CK   +  A K+FEEM   G+    V YN+LI+G C  G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LD A A +DEM+  G+ P + T N+LI+    ++  ++A  +  +I E+G+SP  ITYN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+ YC+    + AF + + ML  G+ P   TY  L+  LS++  ++   ++  ++ + 
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    + +N L+   C +   K A  LL +M +M   K  P+ VT+N +++G C++GK+
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRM---KVPPDEVTFNTIMQGHCREGKV 517

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           E+A  L +E+  +G+ P+  ++                  VR EM++ GF P +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 202/385 (52%), Gaps = 42/385 (10%)

Query: 139 FKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
            K+A D+       G+K ++++ N ++      G+ E  + +   MKR++IE +  ++  
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYK------- 242
           +++G+CK G+L +AS I E+M   G+ P  V YN LIDG+C KG +     YK       
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 243 -----------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
                                  A+ + K++ E GI P+ +T+N LI+G+C+  N   A 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            + +EM + GI     TY SL++ L    ++ EA  L  ++ + G+ P+ +  NALI+G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C    V+ A  L  D+    + P  +T+NT++  +C+EG++E+A  + + M  RG+ PD 
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            ++N LI+G SR G+++    + NE+++ G    ++TYN LV  LCK+ +   A  LL E
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQ 484
           M     +   P+  TY  LI+G  +
Sbjct: 597 MV---SKGMTPDDTTYFTLIEGIAK 618



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 59  ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII 118
           A  + LL   +L S +   K     S LH+  K  +      +F  ++  S+ +  ++I+
Sbjct: 412 AKKAFLLHDEMLASGIKPTK-KTYTSLLHVLSKKNRMKEADDLFKKIT--SEGVLPDAIM 468

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            + L+  +  N      FE  K      +    ++ N +++   +EGK E+   ++ EMK
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK--KGG 236
           RR I+ +  SFN +++G  + G +  A  +  +M   G +P V+TYN L+ G CK  +G 
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK----DEN 274
           +     A+ + K+MV  G+ P++ T+ TLI+G  K    DEN
Sbjct: 589 L-----AEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDEN 625


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 164/527 (31%), Positives = 265/527 (50%), Gaps = 29/527 (5%)

Query: 19  HHWSKLKNT-DPNTVILQLFNSDADPVLILRYFCWSTKE-LRASHSLLLTGRLLHSLVVA 76
           HH   L +   P +    L  S  D  L L++  W+       SH   L+   LH L   
Sbjct: 46  HHLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSHCKCLS---LHILTRF 102

Query: 77  KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           K Y   ++       +    S S+IF  L         +S + D+++ +Y          
Sbjct: 103 KLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAV 162

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVK-EGKFE-DVEYVYKEMKRRRIELNLDSFNFVLN 194
                A   G    VLS N +L A+V+  G  +   E VY+EM R R+  N+ ++N ++ 
Sbjct: 163 NTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIR 222

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G+L K      +M+  G  P VVTYN LID YCK   +G++ +A  + K M   G
Sbjct: 223 GFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK---MGRIDEAFGLLKSMSSKG 279

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN +++N +I+G C++ ++  A ++ EEMG  G     VTYN+L+NG C +G   +A+
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM+ +G+ P+VVT  ALIN  CK + + +A   FD +  +GL P+  TY TLID +
Sbjct: 340 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 399

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            ++G + +A+ + N M + G  P V TYN  I G      +E    ++ E+V  G+   +
Sbjct: 400 SRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV 459

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y+ ++   C+ G+  +A  +  EM    ++   P+ VTY+ LI+G C+  +L +A  L
Sbjct: 460 VSYSTIISGFCRKGELDRAFQMKQEMV---EKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516

Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
             E+L+ GL P++ TY                  + +EM+ KGF+PD
Sbjct: 517 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 563



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 222/381 (58%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G   F      G   +V++ N L+ A  K G+ ++   + K M  + ++ NL S+N ++N
Sbjct: 233 GLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIIN 292

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC+ G + +A +I+E+M   G +P  VTYN L++GYCK+G     ++A  +  +MV NG
Sbjct: 293 GLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF---HQALVIHAEMVRNG 349

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+  LI+  CK  N++ AM+ F++M   G+     TY +LI+G    G L+EA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + +EM  SG  P+VVT NA I+G C  + +E+A  +  ++ E+GL+P V++Y+T+I  +
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C++G ++ AF M+  M+++GV PD  TY+ LI GL     +    ++  E+++ G+    
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L+ A C +G   KA+ L DEM     +   P+ VTY+VLI G  ++ +  +A  L
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMI---HKGFLPDAVTYSVLINGLNKQARTREAKRL 586

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           L +L+ +  +P+  TY  + E
Sbjct: 587 LFKLIYEESVPSDVTYDTLIE 607



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 234/441 (53%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+ AY K  +    F   K     G++ +++S N ++  L +EG  ++   + 
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  +    +  ++N +LNG CK G  ++A  I  +M   GVSP VVTY  LI+  CK 
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + +   A   F  M   G+ PNE T+ TLIDGF +   ++ A ++  EM   G +  V
Sbjct: 368 RNLNR---AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+ I+G CV  +++EA+ +  EM+  GL P+VV+ + +I+GFC+K  +++A  +  +
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G+SP  +TY++LI   C+  R+ +A  +   MLD G+ PD  TY  LI     EG+
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    ++ +E+++ G     VTY++L+  L K  ++++A  LL   FK+  E+  P+ VT
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL---FKLIYEESVPSDVT 601

Query: 475 YNV---------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           Y+                LIKGFC KG + +A+ +   ++E+   P +  Y ++      
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 661

Query: 514 ----------REEMMEKGFIP 524
                      +EM+  GF+P
Sbjct: 662 GGNLPKAFNLYKEMIHSGFVP 682



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 207/394 (52%), Gaps = 25/394 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +    GL+ +  +   L+    ++G   +   +  EM       ++ ++N  ++
Sbjct: 373 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 432

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C   ++ +A  ++++M   G++P VV+Y+ +I G+C+KG + + ++     ++MVE G
Sbjct: 433 GHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK---QEMVEKG 489

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+++LI G C+   ++ A  + +EM   G+     TY +LIN  CV+G L++A+
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGLSPSVITYNTLID- 372
            L DEM+  G  P+ VT + LING  K+    +A R+LF  I E+ + PS +TY+TLI+ 
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIEN 608

Query: 373 --------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
                          +C +G M +A  +  SM++R   P  + YN +I G  R GN+   
Sbjct: 609 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 668

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N+  E++++G     VT   L+ AL K+G +++   ++ +     +  +        VL
Sbjct: 669 FNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL---RSCRLNEAELAKVL 725

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPN--QTTY 510
           ++   ++G +E    +L ++ + GL+PN  +T Y
Sbjct: 726 VEINHKEGNMEAVLNVLTDMAKDGLLPNSGKTAY 759


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 141/407 (34%), Positives = 240/407 (58%), Gaps = 22/407 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +E FK   D+G+   V S   L+    + G+ E+   +YKEM+ R I+ +L SF+ ++ 
Sbjct: 245 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 304

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              + GK++ A   + +M+  G+ P  V Y ++I G+C+ G    M  A  V  +MV  G
Sbjct: 305 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG---LMSDALRVRDEMVGCG 361

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP+ VT+NTL++G CK+  +  A  +  EM   G+   + T+ +LI+G C++GKLD+A+
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L D M+   L+P++VT N LI+G C++  ++KA  L+DD+  + + P+ +TY+ LID++
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C++G++EDAF   + M+++G+LP++ TYN +I G  R GNV   +  + +++ N +   L
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TYN L+    K+ K   A  LL+    MEKEK  P++VTYN+LI GF   G +++A  +
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLN---MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 598

Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
             ++  KG+ P++ TY                  + +EM+++GF PD
Sbjct: 599 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 217/379 (57%), Gaps = 6/379 (1%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           PHL  +A++       + +  + N ++    K  +F+ V+ V  EM++R +  ++ + N 
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 196

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++   +AG    A  +++ M S G+ P +VTYN ++ G C+ G   K ++   VFK+M 
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE---VFKEMD 253

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G+ P+  +F  LI GFC+   I  A+K+++EM   GI   +V+++ LI      GK+D
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+A   EM   GL P+ V    +I GFC+  L+  A  + D++   G  P V+TYNTL+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  CKE R+ DA  + N M +RGV PD+ T+  LI G   EG ++    + + ++N  +R
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTYN L+  +C+ G   KA  L D+M   E    +PN VTY++LI   C+KG++EDA
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE---IFPNHVTYSILIDSHCEKGQVEDA 490

Query: 492 NGLLNELLEKGLIPNQTTY 510
            G L+E++ KG++PN  TY
Sbjct: 491 FGFLDEMINKGILPNIMTY 509



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    ++ LI  Y +  +  +AF     +LD  V    +  N L+A LSR G      +
Sbjct: 83  TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
               + ++       T NI+V   CK  +  K  +++ E   MEK   +P++VT+NV++ 
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISE---MEKRCVFPDVVTHNVMVD 199

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              + G  E A  L++ ++ KGL P   TY  V + +   G
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSG 240


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 255/509 (50%), Gaps = 73/509 (14%)

Query: 72  SLVVAKKYPKIRSFLHMFVKN--GKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVK 128
           ++ V  + P  +S LH+  +    +   V  +FH L+   D L  ++SI+ DML+ A  +
Sbjct: 119 AVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCE 178

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             +    FE F    + G+   + + N +L   +K  + E V  +Y EM R +I+  + +
Sbjct: 179 LKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYT 238

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------- 237
           FN ++N LCK GKL KA D +  M++LGV P VVTYN +I GYC +G +           
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFC------ 270
                                GK+ +A  + + M E G+LP  VT+NTLIDG+C      
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358

Query: 271 -----KDENISAAM------------------------KVFEEMGSHGIAAGVVTYNSLI 301
                +DE +  A+                         + ++MG  GI    +TYN LI
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NG C  G   +A  L DEM++ G++P +VT  +LI    K+  ++ A  LF+ I  +G S
Sbjct: 419 NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P +I +N LID +C  G ++ AFA+   M  R ++PD  TYN L+ G  REG VE  R +
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+   G+R   ++YN L+    K G    A ++ DEM  +      P ++TYN LI+G
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFN---PTLLTYNALIQG 595

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C+  + + A  LL E++ KG+ P+ +TY
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTY 624



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 213/393 (54%), Gaps = 45/393 (11%)

Query: 139 FKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
            K+A D+       G+K +V++ N ++      G+ E    V   MK R +E +  ++  
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------- 237
           +++G+CK GKL +AS I+E MK +G+ P  VTYN LIDGYC KG +              
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 238 ------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
                             GKM +AD + KDM ++GI+P+ +T+N LI+G+C+  N   A 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            + +EM S GI   +VTY SLI  L    ++  A  L ++++  G  P+++  NALI+G 
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C    +++A  L  ++ ++ + P  +TYNTL+   C+EG++E+A  +   M  RG+ PD 
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            +YN LI+G S+ G++     I +E+++ G    L+TYN L+  LCK+ +   A  LL E
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           M     +   P+  TY  LI+G    GK++D++
Sbjct: 612 MV---SKGITPDDSTYFSLIEGI---GKVDDSS 638



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 9/197 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +++  K  +  +   +F  +    +    + I+ + L+  +  N      F   K   
Sbjct: 451 SLIYVLSKRNRMKAADDLFEKI--IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              +    ++ N L++   +EGK E+   + KEMKRR I  +  S+N +++G  K G +N
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIN 568

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCK--KGGIGKMYKADAVFKDMVENGILPNEVT 261
            A  I ++M S+G +P ++TYN LI G CK  +G +     A+ + K+MV  GI P++ T
Sbjct: 569 DAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL-----AEELLKEMVSKGITPDDST 623

Query: 262 FNTLIDGFCKDENISAA 278
           + +LI+G  K ++ S A
Sbjct: 624 YFSLIEGIGKVDDSSEA 640


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/497 (32%), Positives = 251/497 (50%), Gaps = 74/497 (14%)

Query: 100 TIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
           TIF  L+   D +  + ++I D+L+ AY +  KP+   E F    + G   ++ +CNQ+L
Sbjct: 129 TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQML 188

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
              +K  + +    +Y EM R  I  +L +FN ++N LCK GKL KA + +  M++LGV 
Sbjct: 189 SLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVK 248

Query: 219 PKVVTYNILIDGYCKKGGI--------------------------------GKMYKADAV 246
           P VVTYN +I G+C +G                                  G++ +A  +
Sbjct: 249 PNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGL 308

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              M+E G++PN VT+N LIDG+C   ++  A    +EM S GI A +VTYN  I+ L +
Sbjct: 309 ICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM 368

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFC-------------------------- 340
           +G++ +A  +  EM   G+ P+ VT N LING+C                          
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVT 428

Query: 341 ---------KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
                    K+  +++A  LF  I ++GL P +I +N LID +C  G ++ AF +   M 
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +  VLPD  TYN L+ G  REG VE  R +++E+   G++   ++YN L+    K G  K
Sbjct: 489 NMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMK 548

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A  + DEM     +   P I+TYN LI+G C+  + E A  LL E++ KG+ P+ +TY 
Sbjct: 549 DAFRVRDEMMTTGFD---PTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYL 605

Query: 512 IVREEMMEKGFIPDIEG 528
            + E M     + D+EG
Sbjct: 606 SIIEAMET---VDDLEG 619



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 19/261 (7%)

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A   + ++ L+   C   K +EA+     +   G  PN+ T N +++ F K    + A V
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L+ ++    +  S+ T+N +I+  CKEG+++ A      M   GV P+V TYN +I G  
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G  +  R I   + + G+     TYN  +  LCK+G+ ++A  L+    KM +    P
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI---CKMLEGGLVP 319

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           N VTYN LI G+C KG L+ A    +E++ KG++ +  TY +                + 
Sbjct: 320 NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMI 379

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
           +EM EKG +PD   H   I+G
Sbjct: 380 KEMREKGMMPDAVTHNILING 400


>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
          Length = 404

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/264 (48%), Positives = 183/264 (69%), Gaps = 2/264 (0%)

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G+L KA D+ +D+K+ G++P V TYN LIDGYCKKGG G MY  D + K+MVE GI P  
Sbjct: 140 GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA 199

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VTF  LI+G+CK+ N +AA++VFEEM   GIAA VVTYNSLI+GLC +GK++E V L +E
Sbjct: 200 VTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEE 259

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   GL PN +T   ++ GFCKK ++  A    D ++E+ + P V+ YN LID Y + G+
Sbjct: 260 MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGK 319

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           MEDA A++ +M  +G+ P+V+TYNCLI G SR G+      +++E+   G+ A +VTYN+
Sbjct: 320 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 379

Query: 440 LVGALCKDGKSKKAVSLLDEMFKM 463
           L+GALC  G  +++++ + + F +
Sbjct: 380 LIGALCCKG--EESMTFIKQAFAI 401



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 138/247 (55%), Gaps = 6/247 (2%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDG---KLDEAVALRDEMMASGLKPNVVTSNA 334
           A  V +++ + G+A  V TYNSLI+G C  G    +     L  EM+ +G+ P  VT   
Sbjct: 145 AGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGV 204

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LING+CK      A  +F+++ +QG++ SV+TYN+LI   C EG++E+   +   M D G
Sbjct: 205 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 264

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + P+  T+ C++ G  ++G +    + ++ +    +   +V YNIL+    + GK + A+
Sbjct: 265 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 324

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           ++ +    M K+   PN+ TYN LI GF + G    A+GLL+E+ EKG+  +  TY ++ 
Sbjct: 325 AVKE---AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 381

Query: 515 EEMMEKG 521
             +  KG
Sbjct: 382 GALCCKG 388



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 22/212 (10%)

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF---AMRNSMLDRGVLPDVST 401
           + KA  +  DI   GL+PSV TYN+LID YCK+G   + +    +   M++ G+ P   T
Sbjct: 142 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 201

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  LI G  +  N      +  E+   G+ A +VTYN L+  LC +GK ++ V L++EM 
Sbjct: 202 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM- 260

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
             E     PN +T+  ++KGFC+KG + DAN  ++ + E+ + P+   Y I         
Sbjct: 261 --EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLG 318

Query: 513 -------VREEMMEKGFIPDIEGHMYNISGTS 537
                  V+E M +KG  P++  +   I+G S
Sbjct: 319 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 350



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 6/151 (3%)

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG---NVEGVRNIMNELVNNGMRAGL 434
           G++  A  +   +   G+ P V+TYN LI G  ++G   N+  V  ++ E+V  G+    
Sbjct: 140 GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA 199

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VT+ +L+   CK+  +  AV + +EM   +++    ++VTYN LI G C +GK+E+   L
Sbjct: 200 VTFGVLINGYCKNSNTAAAVRVFEEM---KQQGIAASVVTYNSLISGLCSEGKVEEGVKL 256

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + E+ + GL PN+ T+  V +   +KG + D
Sbjct: 257 MEEMEDLGLSPNEITFGCVLKGFCKKGMMAD 287


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 168/518 (32%), Positives = 265/518 (51%), Gaps = 43/518 (8%)

Query: 30   NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
            + +I  L     D  L+L +F W+    R   +L     ++H  V +K     +S +  F
Sbjct: 511  DHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 568

Query: 90   VKNGKFT---SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK-NMKPHLGFEAFKRAGDY 145
             +  K     S    F  L         +  + D+     V+  M P    + F++  +Y
Sbjct: 569  WERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPE-ARKVFEKMLNY 627

Query: 146  GLKSSVLSCNQLLRALVKE-GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL  SV SCN  L  L K+  K      V++E     +  N+ S+N V++ +C+ G++N+
Sbjct: 628  GLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINE 687

Query: 205  ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------------- 242
            A  ++  M+  G +P V++Y+ +I+GYC+ G + K++K                      
Sbjct: 688  AHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIG 747

Query: 243  ----------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
                      A+  F +M+  GILP+ + + TL+DGFCK  +I AA K F EM S  I  
Sbjct: 748  LLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITP 807

Query: 293  GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             V+TY ++I+G C  G + EA  L  EM+  GL+P+++T   L+NG+CK   ++ A  + 
Sbjct: 808  DVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVH 867

Query: 353  DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            + + + G SP+V+TY TLID  CKEG ++ A  + + M   G+ P++ TYN ++ GL + 
Sbjct: 868  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 413  GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
            GN+E    ++ E    G+ A  VTY  L+ A CK G+  KA  +L EM     +   P I
Sbjct: 928  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ---PTI 984

Query: 473  VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            VT+NVL+ GFC  G LED   LLN +L KG+ PN TT+
Sbjct: 985  VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 196/368 (53%), Gaps = 6/368 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GLK +  +   ++  L +  K  + E  + EM  + I  +   +  +++G CK G +  A
Sbjct: 734  GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            S    +M S  ++P V+TY  +I G+C+   IG M +A  +F +M+  G+ P+ +TF  L
Sbjct: 794  SKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEMLCRGLEPDIITFTEL 850

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            ++G+CK  +I  A +V   M   G +  VVTY +LI+GLC +G LD A  L  EM   GL
Sbjct: 851  MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            +PN+ T N+++NG CK   +E+A  L  +    GL+   +TY TL+DAYCK G M+ A  
Sbjct: 911  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +   ML +G+ P + T+N L+ G    G +E    ++N ++  G+     T+N LV   C
Sbjct: 971  ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030

Query: 446  KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                 K A ++  +M     E   P+  TY  L+KG C    +++A  L  E+  KG   
Sbjct: 1031 IRNNLKAATAIYKDMCSRGVE---PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087

Query: 506  NQTTYQIV 513
            + +TY ++
Sbjct: 1088 SVSTYSVL 1095



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 206/390 (52%), Gaps = 9/390 (2%)

Query: 137  EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            EAF      G+    +    L+    K G        + EM  R I  ++ ++  +++G 
Sbjct: 760  EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819

Query: 197  CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            C+ G + +A  +  +M   G+ P ++T+  L++GYCK G I   ++   V   M++ G  
Sbjct: 820  CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFR---VHNHMIQAGCS 876

Query: 257  PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            PN VT+ TLIDG CK+ ++ +A ++  EM   G+   + TYNS++NGLC  G ++EAV L
Sbjct: 877  PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 936

Query: 317  RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              E  A+GL  + VT   L++ +CK   ++KA+ +  ++  +GL P+++T+N L++ +C 
Sbjct: 937  VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCL 996

Query: 377  EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             G +ED   + N ML +G+ P+ +T+NCL+       N++    I  ++ + G+     T
Sbjct: 997  HGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056

Query: 437  YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  LV   C     K+A  L  EM    K K +  ++ TY+VLIKGF ++ K  +A  + 
Sbjct: 1057 YENLVKGHCNARNMKEAWFLFQEM----KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF 1112

Query: 496  NELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +++   GL  ++  +    +    KG  PD
Sbjct: 1113 DQMRRDGLAADKEIFDFFSDTKY-KGKRPD 1141



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 200/400 (50%), Gaps = 25/400 (6%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK-AGKL 202
           D+G    V   +   + LV+ G   +   V+++M    + L++DS N  L  L K   K 
Sbjct: 593 DWGSDPRVF--DVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT 650

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  +  +   +GV   V +YNI+I   C+   +G++ +A  +   M   G  P+ +++
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQ---LGRINEAHHLLLLMELKGYTPDVISY 707

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           +T+I+G+C+   +    K+ E+M   G+     TY S+I  LC   KL EA     EM+ 
Sbjct: 708 STVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIG 767

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P+ +    L++GFCK+  +  A   F ++  + ++P V+TY  +I  +C+ G M +
Sbjct: 768 QGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 827

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + + ML RG+ PD+ T+  L+ G  + G+++    + N ++  G    +VTY  L+ 
Sbjct: 828 AGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLID 887

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK+G    A  LL EM+K+  +   PNI TYN ++ G C+ G +E+A  L+ E    G
Sbjct: 888 GLCKEGDLDSANELLHEMWKIGLQ---PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944

Query: 503 LIPNQTTY----------------QIVREEMMEKGFIPDI 526
           L  +  TY                Q +  EM+ KG  P I
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTI 984



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 178/346 (51%), Gaps = 3/346 (0%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            ++I+   L+  + K        + F       +   VL+   ++    + G   +   ++
Sbjct: 773  DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             EM  R +E ++ +F  ++NG CKAG +  A  +   M   G SP VVTY  LIDG CK+
Sbjct: 833  HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
            G +     A+ +  +M + G+ PN  T+N++++G CK  NI  A+K+  E  + G+ A  
Sbjct: 893  GDLDS---ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949

Query: 295  VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            VTY +L++  C  G++D+A  +  EM+  GL+P +VT N L+NGFC   ++E    L + 
Sbjct: 950  VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            +  +G++P+  T+N L+  YC    ++ A A+   M  RGV PD  TY  L+ G     N
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069

Query: 415  VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            ++    +  E+   G    + TY++L+    K  K  +A  + D+M
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 164/317 (51%), Gaps = 3/317 (0%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GL+  +++  +L+    K G  +D   V+  M +     N+ ++  +++GLCK G L+ A
Sbjct: 839  GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++ +M  +G+ P + TYN +++G CK G I +  K    F+     G+  + VT+ TL
Sbjct: 899  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE---AAGLNADTVTYTTL 955

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +D +CK   +  A ++  EM   G+   +VT+N L+NG C+ G L++   L + M+A G+
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             PN  T N L+  +C +  ++ A  ++ D+  +G+ P   TY  L+  +C    M++A+ 
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +   M  +G    VSTY+ LI G  +       R I +++  +G+ A    ++       
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKY 1135

Query: 446  KDGKSKKAVSLLDEMFK 462
            K  +    V  +DE+ +
Sbjct: 1136 KGKRPDTIVDPIDEIIE 1152


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/376 (35%), Positives = 229/376 (60%), Gaps = 6/376 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +E FK   D+G+   V S   L+    + G+ E+   +YKEM+ R I+ +L SF+ ++ 
Sbjct: 184 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 243

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              + GK++ A   + +M+  G+ P  V Y ++I G+C+ G    M  A  V  +MV  G
Sbjct: 244 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG---LMSDALRVRDEMVGCG 300

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP+ VT+NTL++G CK+  +  A  +  EM   G+   + T+ +LI+G C++GKLD+A+
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L D M+   L+P++VT N LI+G C++  ++KA  L+DD+  + + P+ +TY+ LID++
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C++G++EDAF   + M+++G+LP++ TYN +I G  R GNV   +  + +++ N +   L
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 480

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TYN L+    K+ K   A  LL+    MEKEK  P++VTYN+LI GF   G +++A  +
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLN---MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 537

Query: 495 LNELLEKGLIPNQTTY 510
             ++  KG+ P++ TY
Sbjct: 538 FEKMCAKGIEPDRYTY 553



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 217/379 (57%), Gaps = 6/379 (1%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           PHL  +A++       + +  + N ++    K  +F+ V+ V  EM++R +  ++ + N 
Sbjct: 76  PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 135

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++   +AG    A  +++ M S G+ P +VTYN ++ G C+ G   K ++   VFK+M 
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE---VFKEMD 192

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G+ P+  +F  LI GFC+   I  A+K+++EM   GI   +V+++ LI      GK+D
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+A   EM   GL P+ V    +I GFC+  L+  A  + D++   G  P V+TYNTL+
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  CKE R+ DA  + N M +RGV PD+ T+  LI G   EG ++    + + ++N  +R
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTYN L+  +C+ G   KA  L D+M   E    +PN VTY++LI   C+KG++EDA
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE---IFPNHVTYSILIDSHCEKGQVEDA 429

Query: 492 NGLLNELLEKGLIPNQTTY 510
            G L+E++ KG++PN  TY
Sbjct: 430 FGFLDEMINKGILPNIMTY 448



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 226/406 (55%), Gaps = 22/406 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK  +++ N +L+ L + G ++    V+KEM    +  ++ SF  ++ G C+ G++ +A
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I ++M+  G+ P +V+++ LI  + ++G   KM  A A  ++M   G++P+ V +  +
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRG---KMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFC+   +S A++V +EM   G    VVTYN+L+NGLC + +L +A  L +EM   G+
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T   LI+G+C +  ++KA  LFD +  Q L P ++TYNTLID  C++G ++ A  
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  R + P+  TY+ LI     +G VE     ++E++N G+   ++TYN ++   C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G   K    L    KM   K  P+++TYN LI G+ ++ K+ DA  LLN + ++ + P
Sbjct: 457 RSGNVSKGQKFLQ---KMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513

Query: 506 NQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           +  TY +                + E+M  KG  PD   +M  I+G
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 559



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 196/393 (49%), Gaps = 10/393 (2%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLG 135
           P +RSF  +    G F  V  I  AL    +   R    + +    L+  + +  K    
Sbjct: 198 PDVRSFTILI---GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 254

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
               +    +GL    +    ++    + G   D   V  EM       ++ ++N +LNG
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCK  +L  A  ++ +M+  GV P + T+  LI GYC +G   K+ KA  +F  M+   +
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG---KLDKALQLFDTMLNQRL 371

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VT+NTLIDG C+  ++  A  ++++M S  I    VTY+ LI+  C  G++++A  
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             DEM+  G+ PN++T N++I G+C+   V K +     +    +SP +ITYNTLI  Y 
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           KE +M DAF + N M    V PDV TYN LI G S  GNV+    I  ++   G+     
Sbjct: 492 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 551

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           TY  ++      G SK+A  L DEM +  KEK+
Sbjct: 552 TYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKR 584



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    ++ LI  Y +  +  +AF     +LD  V    +  N L+A LSR G      +
Sbjct: 22  TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
               + ++       T NI+V   CK  +  K  +++ E   MEK   +P++VT+NV++ 
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISE---MEKRCVFPDVVTHNVMVD 138

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              + G  E A  L++ ++ KGL P   TY  V + +   G
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSG 179


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/535 (31%), Positives = 266/535 (49%), Gaps = 60/535 (11%)

Query: 29  PNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGR----LLHSLVVAKKYPKIRS 84
           P      L NS +D   +L +  W+  + +A H+   T       LH LV  K Y    S
Sbjct: 39  PQAASYVLLNSQSDQRTLLNFLTWAQAQAQA-HNFFFTPHCKCLALHILVRFKLYRTAHS 97

Query: 85  FLHMFVKNGKFTSVSTIFHALST----CSDSLCRNSIIIDMLMLAYVKNMKPHLGF---- 136
                       + +++F  L      CS     +S + D++    VK++   LGF    
Sbjct: 98  LAADLAATLPDPTGASLFRHLHDTFHLCSSPFS-SSAVFDLV----VKSLS-RLGFVPKA 151

Query: 137 -EAFKRAGDYGLKSSVLSCNQLLRALVKEGK-----FEDVEYVYKEMKRRRIELNLDSFN 190
                 A  +G   +VLS N +L AL++        ++D E V+++M R  +  N+ ++N
Sbjct: 152 LTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYN 211

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK---------------G 235
            ++ G+   G L K    M  M+  G+SP VVTYN LID  CKK               G
Sbjct: 212 VIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG 271

Query: 236 GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           G+                 G+M +   + ++M   G++P+EVT+NTL++GFCK+ N+   
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           + +  EM   G++  VVTY +LIN +C  G L  AV + D+M   GL+PN  T   LI+G
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           FC+K L+ +A  +  ++   G SPSV+TYN L+  YC  GR+++A  +   M++RG+ PD
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V +Y+ +IAG  RE  +     +  E+V  G+    VTY+ L+  LC   K  +A  L  
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFR 511

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           EM    +    P+ VTY  LI  +C  G+L  A  L +E++++G +P+  TY ++
Sbjct: 512 EMM---RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 226/427 (52%), Gaps = 52/427 (12%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           LGF   ++    G+  +V++ N L+ A  K+ K ++   + + M    +  NL S+N V+
Sbjct: 227 LGF--MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------- 237
           NGLC  G++++  +++E+M+  G+ P  VTYN L++G+CK+G +                
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344

Query: 238 ----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                           G + +A  +F  M   G+ PNE T+ TLIDGFC+   ++ A KV
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
             EM   G +  VVTYN+L++G C  G++ EAV +   M+  GL P+VV+ + +I GFC+
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           ++ + KA  + +++ E+G+ P  +TY++LI   C + ++ +AF +   M+ RG+ PD  T
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVT 524

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI     +G +     + +E+V  G     VTY++L+  L K  ++K A  LL ++F
Sbjct: 525 YTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLF 584

Query: 462 KMEKEKKWPNIVTYNVLI---------------KGFCQKGKLEDANGLLNELLEKGLIPN 506
               E+  P+ VTYN LI               KGFC KG + +A+ +   +L++   PN
Sbjct: 585 ---YEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641

Query: 507 QTTYQIV 513
              Y ++
Sbjct: 642 AAIYNLM 648



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 193/365 (52%), Gaps = 21/365 (5%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--V 246
           F+ V+  L + G + KA  ++      G +P V++YN ++D   ++         DA  V
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+DMV NG+ PN  T+N +I G     ++   +    +M   GI+  VVTYN+LI+  C 
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             K+ EA+AL   M   G+  N+++ N++ING C K  + +   L +++  +GL P  +T
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTL++ +CKEG +     + + M+ +G+ P+V TY  LI  + + GN+     I +++ 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+R    TY  L+   C+ G   +A  +L EM         P++VTYN L+ G+C  G
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI---VSGFSPSVVTYNALVHGYCFLG 431

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHM 530
           ++++A G+L  ++E+GL P+  +Y  V                +EEM+EKG +PD   + 
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 531 YNISG 535
             I G
Sbjct: 492 SLIQG 496



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 213/445 (47%), Gaps = 56/445 (12%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  + +  + L+  + K    H G          GL  +V++   L+  + K G      
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ +M+ R +  N  ++  +++G C+ G +N+A  ++ +M   G SP VVTYN L+ GY
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C    +G++ +A  + + MVE G+ P+ V+++T+I GFC++  +  A ++ EEM   G+ 
Sbjct: 428 C---FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY+SLI GLC+  KL EA  L  EMM  GL P+ VT  +LIN +C    + KA  L
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 352 FDDISEQGLSP--------------------------------SV---ITYNTLID---- 372
            D++ ++G  P                                SV   +TYNTLI+    
Sbjct: 545 HDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSN 604

Query: 373 -----------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
                       +C +G M +A  +  +ML R   P+ + YN +I G SR GNV    N+
Sbjct: 605 NEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             EL ++      V    LV AL ++G + +   LL  +    +  +  +     VL++ 
Sbjct: 665 YMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL---RSCRLNDAKVAKVLVEV 721

Query: 482 FCQKGKLEDANGLLNELLEKGLIPN 506
             ++G ++    +L E+ + GL+P+
Sbjct: 722 NFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 267/520 (51%), Gaps = 16/520 (3%)

Query: 8   TIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTG 67
           ++++I    + HH+  L N +P  +          P  +L +F + +     SH++    
Sbjct: 64  SLKNILPSFKAHHFISLVNQNPYFL---------PPKSLLSFFDFLSSYPTFSHTVQSYC 114

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
            ++H L+  +   +  S LH  V      S S++F ++     +L  +S + D LM  Y 
Sbjct: 115 SMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTL-SSSFVFDALMSVYT 173

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           +        + F+    + LK     C  LL  ++K          Y E+       N+ 
Sbjct: 174 EFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVY 233

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +FN ++N LCK GK+  A  I ++++  G+ P  V++N LI+GYCK G + + ++   V 
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMV- 292

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M E  + P+  T++ LIDG CK+  +  A  +F+EM   G+    VT+ +LING C +
Sbjct: 293 --MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKN 350

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++D A+ +  +M   GLK ++V  N LI+G CK     +AR    +++++GL P   TY
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TL+D  CKEG +E A  MR  M+  G+  D   +  +I+GL R+G +      + E++ 
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLR 470

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++    TY +++   CK G  K    LL EM   + +   P ++TYNVL+ G C++G+
Sbjct: 471 AGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM---QSDGHIPGVITYNVLMNGLCKQGQ 527

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++A+ LLN +L  G++P+  TY I+ +   + G + D +
Sbjct: 528 VKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ 567



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 203/376 (53%), Gaps = 11/376 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + +F   ++   K GK      IF  +      L   ++  + L+  Y K+     GF
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIR--KTGLQPTAVSFNTLINGYCKSGNLEEGF 287

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                  ++ +   V + + L+  L KE + ED  +++KEM  R +  N  +F  ++NG 
Sbjct: 288 RLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQ 347

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+++ A +I + M + G+   +V YN LIDG CK    G   +A     +M + G++
Sbjct: 348 CKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKG---GYFREARKFVGEMTKRGLI 404

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P++ T+ TL+DG CK+ ++  A+++ +EM   GI    V + ++I+GLC DGK+ +A   
Sbjct: 405 PDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERT 464

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+ +GLKP+  T   +++GFCKK  V+    L  ++   G  P VITYN L++  CK
Sbjct: 465 LREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCK 524

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G++++A  + N+ML+ GV+PD  TYN L+ G  + G +   +N+  E+   G+ +   +
Sbjct: 525 QGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYAS 581

Query: 437 YNILVGALCKDGKSKK 452
           Y  L+  L K  K ++
Sbjct: 582 YRSLLHELSKASKDRQ 597


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 41/517 (7%)

Query: 30   NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
            + +I  L     D  L+L +F W+    R   +L     ++H  V +K     +S +  F
Sbjct: 531  DHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 588

Query: 90   VKNGKFT---SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
             +  K     S    F  L         +  + D+     V           F++  +YG
Sbjct: 589  WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 648

Query: 147  LKSSVLSCNQLLRALVKEG-KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            L  SV SCN  L  L K+  K      V++E     +  N+ S+N V++ +C+ G++ +A
Sbjct: 649  LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 708

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----------------------- 242
              ++  M+  G +P V++Y+ +++GYC+ G + K++K                       
Sbjct: 709  HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 768

Query: 243  ---------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                     A+  F +M+  GILP+ V + TLIDGFCK  +I AA K F EM S  I   
Sbjct: 769  LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 828

Query: 294  VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            V+TY ++I+G C  G + EA  L  EM   GL+P+ VT   LING+CK   ++ A  + +
Sbjct: 829  VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888

Query: 354  DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
             + + G SP+V+TY TLID  CKEG ++ A  + + M   G+ P++ TYN ++ GL + G
Sbjct: 889  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 414  NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            N+E    ++ E    G+ A  VTY  L+ A CK G+  KA  +L EM     +   P IV
Sbjct: 949  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ---PTIV 1005

Query: 474  TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            T+NVL+ GFC  G LED   LLN +L KG+ PN TT+
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 202/387 (52%), Gaps = 14/387 (3%)

Query: 137  EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            E  KR G   LK +      ++  L +  K  + E  + EM R+ I  +   +  +++G 
Sbjct: 748  EVMKRKG---LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 804

Query: 197  CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            CK G +  AS    +M S  ++P V+TY  +I G+C+   IG M +A  +F +M   G+ 
Sbjct: 805  CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEMFCKGLE 861

Query: 257  PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            P+ VTF  LI+G+CK  ++  A +V   M   G +  VVTY +LI+GLC +G LD A  L
Sbjct: 862  PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921

Query: 317  RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              EM   GL+PN+ T N+++NG CK   +E+A  L  +    GL+   +TY TL+DAYCK
Sbjct: 922  LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981

Query: 377  EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             G M+ A  +   ML +G+ P + T+N L+ G    G +E    ++N ++  G+     T
Sbjct: 982  SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041

Query: 437  YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
            +N LV   C     K A ++  +M         P+  TY  L+KG C+   +++A  L  
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMC---SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098

Query: 497  ELLEKGLIPNQTTYQIVREEMMEKGFI 523
            E+  KG   + +TY +     + KGF+
Sbjct: 1099 EMKGKGFSVSVSTYSV-----LIKGFL 1120



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 206/390 (52%), Gaps = 9/390 (2%)

Query: 137  EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            EAF      G+    +    L+    K G        + EM  R I  ++ ++  +++G 
Sbjct: 780  EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839

Query: 197  CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            C+ G + +A  +  +M   G+ P  VT+  LI+GYCK G +   ++   V   M++ G  
Sbjct: 840  CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR---VHNHMIQAGCS 896

Query: 257  PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            PN VT+ TLIDG CK+ ++ +A ++  EM   G+   + TYNS++NGLC  G ++EAV L
Sbjct: 897  PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956

Query: 317  RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              E  A+GL  + VT   L++ +CK   ++KA+ +  ++  +GL P+++T+N L++ +C 
Sbjct: 957  VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016

Query: 377  EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             G +ED   + N ML +G+ P+ +T+N L+       N++    I  ++ + G+     T
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 1076

Query: 437  YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  LV   CK    K+A  L  EM    K K +  ++ TY+VLIKGF ++ K  +A  + 
Sbjct: 1077 YENLVKGHCKARNMKEAWFLFQEM----KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 1132

Query: 496  NELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +++  +GL  ++  +    +    KG  PD
Sbjct: 1133 DQMRREGLAADKEIFDFFSDTKY-KGKRPD 1161



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 11/377 (2%)

Query: 89   FVKNGKFTSVSTIF---HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
            F K G   + S  F   H+     D L   +II     +  +      L  E F +    
Sbjct: 804  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCK---- 858

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GL+   ++  +L+    K G  +D   V+  M +     N+ ++  +++GLCK G L+ A
Sbjct: 859  GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++ +M  +G+ P + TYN +++G CK G I +  K    F+     G+  + VT+ TL
Sbjct: 919  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE---AAGLNADTVTYTTL 975

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +D +CK   +  A ++ +EM   G+   +VT+N L+NG C+ G L++   L + M+A G+
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             PN  T N+L+  +C +  ++ A  ++ D+  +G+ P   TY  L+  +CK   M++A+ 
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +   M  +G    VSTY+ LI G  +       R + +++   G+ A    ++       
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 1155

Query: 446  KDGKSKKAVSLLDEMFK 462
            K  +    V  +DE+ +
Sbjct: 1156 KGKRPDTIVDPIDEIIE 1172



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 162/335 (48%), Gaps = 5/335 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+     L   G L +A  + E M + G+   V + N+ +    K     K   A  VF+
Sbjct: 621 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD--CYKTATAIIVFR 678

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +  E G+  N  ++N +I   C+   I  A  +   M   G    V++Y++++NG C  G
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LD+   L + M   GLKPN     ++I   C+   + +A   F ++  QG+ P  + Y 
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID +CK G +  A      M  R + PDV TY  +I+G  + G++     + +E+   
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    VT+  L+   CK G  K A  + + M +       PN+VTY  LI G C++G L
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDL 915

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           + AN LL+E+ + GL PN  TY  +   + + G I
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 950



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 5/359 (1%)

Query: 70   LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
            +HS  +        + +  F + G       +FH +      L  +S+    L+  Y K 
Sbjct: 820  MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM--FCKGLEPDSVTFTELINGYCKA 877

Query: 130  MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                  F         G   +V++   L+  L KEG  +    +  EM +  ++ N+ ++
Sbjct: 878  GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937

Query: 190  NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
            N ++NGLCK+G + +A  ++ + ++ G++   VTY  L+D YCK    G+M KA  + K+
Sbjct: 938  NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS---GEMDKAQEILKE 994

Query: 250  MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
            M+  G+ P  VTFN L++GFC    +    K+   M + GIA    T+NSL+   C+   
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054

Query: 310  LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            L  A A+  +M + G+ P+  T   L+ G CK + +++A  LF ++  +G S SV TY+ 
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114

Query: 370  LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI  + K  +  +A  + + M   G+  D   ++       +    + + + ++E++ N
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 175/526 (33%), Positives = 266/526 (50%), Gaps = 59/526 (11%)

Query: 43  PVLILRYFCWSTKELRA-SHSLLLTGRLLHSLVVA-KKYPKIRSFLHMFVKNGKFTSVST 100
           P +++ +F W+   L    H+ L +   L   + + +K+   +S L  F+   +   +  
Sbjct: 66  PNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHL 125

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
               L++ S +L      +D  + AYV++ +PH  F+ FK+     L+ ++L+CN LL +
Sbjct: 126 SILRLTSPSKAL------LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179

Query: 161 LVKEGKFEDVEY---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LV+      V +    + +  +  I  N+++FN V+ G C   K   A + +  M     
Sbjct: 180 LVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNC 239

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP  VTYN ++D  CKKG +G    A  +  DM   G+LPN  T+N L+ G+CK   +  
Sbjct: 240 SPDNVTYNTILDALCKKGRLGD---ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  V E M  + +   V TYN LINGLC +G+++EA  LRDEM    L P+VV+ N LIN
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  +   + +A  L +++SE+G+ P+ +T+N ++  YCKEG+M+DA      M + G  P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC------------ 445
           D  TYN LI G  + GN+      M+E+    M+   VT N ++  LC            
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 446 -----------------------KDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKG 481
                                  KDG   +A+ L DEM    KEK+  P+ VTYN +I G
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM----KEKEIIPSTVTYNCIIGG 532

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
            CQ GK E A   LNELLE GL+P++TTY  +     RE  +EK F
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 216/384 (56%), Gaps = 6/384 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V + N L+  L  EG+ E+   +  EM+  ++  ++ S+N ++NG  +  K+++A 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++E+M   GV P  VT+NI++  YCK+G   KM  A      M E+G  P+ VT+NTLI
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEG---KMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+CK  N+  A +  +EMG   +    VT N+++  LC + KL+EA  L       G  
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + V+   LI G+ K   V++A  L+D++ E+ + PS +TYN +I   C+ G+ E A + 
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N +L+ G+LPD +TYN ++ G  REG+VE      N++V N  +  + T NIL+  LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G  +KA+ L +       + K  + VTYN LI   C++G+L+DA  LL+E+ EK L P+
Sbjct: 606 EGMLEKALKLFNTWV---SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 507 QTTYQIVREEMMEKGFIPDIEGHM 530
             TY  +   + + G I + E  M
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFM 686



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 211/429 (49%), Gaps = 55/429 (12%)

Query: 137 EAFK---RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EAFK      +  L   V+S N L+   ++  K  +   + +EM  + ++ N  + N ++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY-----------K 242
              CK GK++ AS+ +  M+  G SP  VTYN LI+GYCK G +G+ +           K
Sbjct: 391 KWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450

Query: 243 ADAVFKDMV---------------------ENGILPNEVTFNTLIDGFCKDENISAAMKV 281
            D+V  + +                     + G   +EV++ TLI G+ KD N+  A+K+
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           ++EM    I    VTYN +I GLC  GK ++A++  +E++ SGL P+  T N +++G+C+
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           +  VEKA    + + E    P V T N L+   C EG +E A  + N+ + +G   D  T
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN LI  L +EG ++   N+++E+    +     TYN ++ AL   G+ ++A   + +M 
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690

Query: 462 K--------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           +                       E+   + V Y+  IK  C +GK +DA  +  E  +K
Sbjct: 691 EKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQK 750

Query: 502 GLIPNQTTY 510
           G+  +++TY
Sbjct: 751 GITVDKSTY 759



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 26/318 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S+ ++ ++    +  K    ++    A   G     +S   L+    K+G  +    ++
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EMK + I  +  ++N ++ GLC+ GK  +A   + ++   G+ P   TYN ++ GYC++
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCRE 571

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + K ++       MVEN   P+  T N L+ G C +  +  A+K+F    S G A   
Sbjct: 572 GDVEKAFQ---FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDT 628

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LI  LC +G+LD+A  L  EM    L P+  T NA+I        + +A      
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688

Query: 355 ISEQGLSP-----------------------SVITYNTLIDAYCKEGRMEDAFAMRNSML 391
           + E+G  P                       S + Y+  I   C EG+ +DA  +     
Sbjct: 689 MLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 392 DRGVLPDVSTYNCLIAGL 409
            +G+  D STY  L+ GL
Sbjct: 749 QKGITVDKSTYINLMDGL 766



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 22/194 (11%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV-- 418
           SPS    +T I AY + G+   AF +   M    + P++ T N L+  L R  +   V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 419 -RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            R   N+ +  G+   + T+NI++   C + K K AV  L+ M K       P+ VTYN 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCS---PDNVTYNT 248

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           ++   C+KG+L DA  LL ++  +GL+PN+ TY I                V E M +  
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 522 FIPDIEGHMYNISG 535
            +PD+  +   I+G
Sbjct: 309 LLPDVWTYNMLING 322



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 22/228 (9%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+    +  I  + +      A  +F  +    L P+++T NTL+++  +          
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 387 R---NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           R   N  +  G++P+V+T+N +I G   E   +     +N +         VTYN ++ A
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G+   A  LL     M+     PN  TYN+L+ G+C+ G L++A  ++  + +  L
Sbjct: 253 LCKKGRLGDARDLL---MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           +P+  TY +                +R+EM     +PD+  +   I+G
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+   +  +   K  V +CN LLR L  EG  E    ++     +   ++  ++N ++ 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G+L+ A +++ +M+   + P   TYN +I      G   ++ +A+     M+E G
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG---RIREAEEFMSKMLEKG 693

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP +V              +     V     S    +  V Y+  I  LC +GK  +A+
Sbjct: 694 XLPXQVL------------QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKK 343
            +  E    G+  +  T   L++G  K++
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRR 770


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 41/517 (7%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
           + +I  L     D  L+L +F W+    R   +L     ++H  V +K     +S +  F
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 145

Query: 90  VKNGKFT---SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
            +  K     S    F  L         +  + D+     V           F++  +YG
Sbjct: 146 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 205

Query: 147 LKSSVLSCNQLLRALVKEG-KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           L  SV SCN  L  L K+  K      V++E     +  N+ S+N V++ +C+ G++ +A
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 265

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----------------------- 242
             ++  M+  G +P V++Y+ +++GYC+ G + K++K                       
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325

Query: 243 ---------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                    A+  F +M+  GILP+ V + TLIDGFCK  +I AA K F EM S  I   
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V+TY ++I+G C  G + EA  L  EM   GL+P+ VT   LING+CK   ++ A  + +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + G SP+V+TY TLID  CKEG ++ A  + + M   G+ P++ TYN ++ GL + G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           N+E    ++ E    G+ A  VTY  L+ A CK G+  KA  +L EM     +   P IV
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ---PTIV 562

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           T+NVL+ GFC  G LED   LLN +L KG+ PN TT+
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 199/378 (52%), Gaps = 11/378 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +      ++  L +  K  + E  + EM R+ I  +   +  +++G CK G +  A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S    +M S  ++P V+TY  +I G+C+   IG M +A  +F +M   G+ P+ VTF  L
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+CK  ++  A +V   M   G +  VVTY +LI+GLC +G LD A  L  EM   GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN+ T N+++NG CK   +E+A  L  +    GL+   +TY TL+DAYCK G M+ A  
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML +G+ P + T+N L+ G    G +E    ++N ++  G+     T+N LV   C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                K A ++  +M         P+  TY  L+KG C+   +++A  L  E+  KG   
Sbjct: 608 IRNNLKAATAIYKDMC---SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664

Query: 506 NQTTYQIVREEMMEKGFI 523
           + +TY +     + KGF+
Sbjct: 665 SVSTYSV-----LIKGFL 677



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 206/390 (52%), Gaps = 9/390 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           EAF      G+    +    L+    K G        + EM  R I  ++ ++  +++G 
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ G + +A  +  +M   G+ P  VT+  LI+GYCK G +   ++   V   M++ G  
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR---VHNHMIQAGCS 453

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+ TLIDG CK+ ++ +A ++  EM   G+   + TYNS++NGLC  G ++EAV L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             E  A+GL  + VT   L++ +CK   ++KA+ +  ++  +GL P+++T+N L++ +C 
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +ED   + N ML +G+ P+ +T+N L+       N++    I  ++ + G+     T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLL 495
           Y  LV   CK    K+A  L  EM    K K +  ++ TY+VLIKGF ++ K  +A  + 
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEM----KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +++  +GL  ++  +    +    KG  PD
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKY-KGKRPD 718



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 183/375 (48%), Gaps = 11/375 (2%)

Query: 89  FVKNGKFTSVSTIF---HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           F K G   + S  F   H+     D L   +II     +  +      L  E F +    
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCK---- 415

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+   ++  +L+    K G  +D   V+  M +     N+ ++  +++GLCK G L+ A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           ++++ +M  +G+ P + TYN +++G CK G I +  K    F+     G+  + VT+ TL
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE---AAGLNADTVTYTTL 532

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D +CK   +  A ++ +EM   G+   +VT+N L+NG C+ G L++   L + M+A G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N+L+  +C +  ++ A  ++ D+  +G+ P   TY  L+  +CK   M++A+ 
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G    VSTY+ LI G  +       R + +++   G+ A    ++       
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712

Query: 446 KDGKSKKAVSLLDEM 460
           K  +    V  +DE+
Sbjct: 713 KGKRPDTIVDPIDEI 727



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 5/337 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+     L   G L +A  + E M + G+   V + N+ +    K     K   A  VF+
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD--CYKTATAIIVFR 235

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +  E G+  N  ++N +I   C+   I  A  +   M   G    V++Y++++NG C  G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LD+   L + M   GLKPN     ++I   C+   + +A   F ++  QG+ P  + Y 
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID +CK G +  A      M  R + PDV TY  +I+G  + G++     + +E+   
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    VT+  L+   CK G  K A  + + M +       PN+VTY  LI G C++G L
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDL 472

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + AN LL+E+ + GL PN  TY  +   + + G I +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 5/359 (1%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           +HS  +        + +  F + G       +FH +      L  +S+    L+  Y K 
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--CKGLEPDSVTFTELINGYCKA 434

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                 F         G   +V++   L+  L KEG  +    +  EM +  ++ N+ ++
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N ++NGLCK+G + +A  ++ + ++ G++   VTY  L+D YCK    G+M KA  + K+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS---GEMDKAQEILKE 551

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+  G+ P  VTFN L++GFC    +    K+   M + GIA    T+NSL+   C+   
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L  A A+  +M + G+ P+  T   L+ G CK + +++A  LF ++  +G S SV TY+ 
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           LI  + K  +  +A  + + M   G+  D   ++       +    + + + ++E++ N
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 175/526 (33%), Positives = 266/526 (50%), Gaps = 59/526 (11%)

Query: 43  PVLILRYFCWSTKELRA-SHSLLLTGRLLHSLVVA-KKYPKIRSFLHMFVKNGKFTSVST 100
           P +++ +F W+   L    H+ L +   L   + + +K+   +S L  F+   +   +  
Sbjct: 66  PNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHL 125

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
               L++ S +L      +D  + AYV++ +PH  F+ FK+     L+ ++L+CN LL +
Sbjct: 126 SILRLTSPSKAL------LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179

Query: 161 LVKEGKFEDVEY---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LV+      V +    + +  +  I  N+++FN V+ G C   K   A + +  M     
Sbjct: 180 LVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNC 239

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP  VTYN ++D  CKKG +G    A  +  DM   G+LPN  T+N L+ G+CK   +  
Sbjct: 240 SPDNVTYNTILDTLCKKGRLGD---ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  V E M  + +   V TYN LINGLC +G+++EA  LRDEM    L P+VV+ N LIN
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  +   + +A  L +++SE+G+ P+ +T+N ++  YCKEG+M+DA      M + G  P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC------------ 445
           D  TYN LI G  + GN+      M+E+    M+   VT N ++  LC            
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 446 -----------------------KDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKG 481
                                  KDG   +A+ L DEM    KEK+  P+ VTYN +I G
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM----KEKEIIPSTVTYNCIIGG 532

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
            CQ GK E A   LNELLE GL+P++TTY  +     RE  +EK F
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 216/384 (56%), Gaps = 6/384 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V + N L+  L  EG+ E+   +  EM+  ++  ++ S+N ++NG  +  K+++A 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++E+M   GV P  VT+NI++  YCK+G   KM  A      M E+G  P+ VT+NTLI
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEG---KMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+CK  N+  A +  +EMG   +    VT N+++  LC + KL+EA  L       G  
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + V+   LI G+ K   V++A  L+D++ E+ + PS +TYN +I   C+ G+ E A + 
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N +L+ G+LPD +TYN ++ G  REG+VE      N++V N  +  + T NIL+  LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G  +KA+ L +       + K  + VTYN LI   C++G+L+DA  LL+E+ EK L P+
Sbjct: 606 EGVLEKALKLFNTWV---SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 507 QTTYQIVREEMMEKGFIPDIEGHM 530
             TY  +   + + G I + E  M
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFM 686



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 214/429 (49%), Gaps = 55/429 (12%)

Query: 137 EAFK---RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EAFK      +  L   V+S N L+   ++  K  +   + +EM  + ++ N  + N ++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY-----------K 242
              CK GK++ AS+ +  M+  G SP  VTYN LI+GYCK G +G+ +           K
Sbjct: 391 KWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450

Query: 243 ADAVFKDMV---------------------ENGILPNEVTFNTLIDGFCKDENISAAMKV 281
            D+V  + +                     + G   +EV++ TLI G+ KD N+  A+K+
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL 510

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           ++EM    I    VTYN +I GLC  GK ++A++  +E++ SGL P+  T N +++G+C+
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           +  VEKA    + + E    P V T N L+   C EG +E A  + N+ + +G   D  T
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL---- 457
           YN LI  L +EG ++   N+++E+    +     TYN ++ AL   G+ ++A   +    
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690

Query: 458 ------DEMFKMEKEKK----------WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
                 D++ +++K +             + V Y+  IK  C +GK +DA  +  E  +K
Sbjct: 691 EKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQK 750

Query: 502 GLIPNQTTY 510
           G+  +++TY
Sbjct: 751 GITVDKSTY 759



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 26/318 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S+ ++ ++    +  K    ++    A   G     +S   L+    K+G  +    ++
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EMK + I  +  ++N ++ GLC+ GK  +A   + ++   G+ P   TYN ++ GYC++
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCRE 571

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + K ++       MVEN   P+  T N L+ G C +  +  A+K+F    S G A   
Sbjct: 572 GDVEKAFQ---FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDT 628

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LI  LC +G+LD+A  L  EM    L P+  T NA+I        + +A      
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688

Query: 355 ISEQGLSPS-----------------------VITYNTLIDAYCKEGRMEDAFAMRNSML 391
           + E+G  P                         + Y+  I   C EG+ +DA  +     
Sbjct: 689 MLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 392 DRGVLPDVSTYNCLIAGL 409
            +G+  D STY  L+ GL
Sbjct: 749 QKGITVDKSTYINLMDGL 766



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 22/194 (11%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV-- 418
           SPS    +T I AY + G+   AF +   M    + P++ T N L+  L R  +   V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 419 -RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            R   N+ +  G+   + T+NI++   C + K K AV  L+ M K       P+ VTYN 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCS---PDNVTYNT 248

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           ++   C+KG+L DA  LL ++  +GL+PN+ TY I                V E M +  
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 522 FIPDIEGHMYNISG 535
            +PD+  +   I+G
Sbjct: 309 LLPDVWTYNMLING 322



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 22/228 (9%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+    +  I  + +      A  +F  +    L P+++T NTL+++  +          
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 387 R---NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           R   N  +  G++P+V+T+N +I G   E   +     +N +         VTYN ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G+   A  LL     M+     PN  TYN+L+ G+C+ G L++A  ++  + +  L
Sbjct: 253 LCKKGRLGDARDLL---MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           +P+  TY +                +R+EM     +PD+  +   I+G
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+   +  +   K  V +CN LLR L  EG  E    ++     +   ++  ++N ++ 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G+L+ A +++ +M+   + P   TYN +I      G   ++ +A+     M+E G
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG---RIREAEEFMSKMLEKG 693

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP++V              +     V     S    +  V Y+  I  LC +GK  +A+
Sbjct: 694 NLPDQVL------------QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKK 343
            +  E    G+  +  T   L++G  K++
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRR 770


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 269/519 (51%), Gaps = 16/519 (3%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRAS 60
           P    +S+++ I   +  +H   L N +P+++          P  +L +F W + +    
Sbjct: 50  PTKPLHSSLKRILPSLTPNHLIDLINLNPHSL---------SPPSLLSFFKWLSTQHHFR 100

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
            S+     + H L   K   + +S L   V      S S++F ++     +  +++++  
Sbjct: 101 LSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTH-QSNLVFS 159

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +LM AY  +       + F+    + L+    SC  L   L+K          Y+E+   
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               ++  FN +++ LCK  K+N+A  +  ++   G+ P VV++N LI+GYCK G + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++     + M+EN + P+  T++ LI+G CK+  +  A K+F EM   G+    VT+ +L
Sbjct: 280 FRLK---RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ING CV G+ D  + +  +M+  G+KP+V+T N LING CK   + +A+ L  +++++GL
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY  LID  CKEG +E A  +R  M+  G+  D   +  LI+G  REG V     
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            + E++  G++    TY +++   CK G  K    LL EM   + +   P +VTYNVL+ 
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM---QCDGHVPGVVTYNVLLN 513

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           G C++G++++AN LL+ +L  G++P+  TY I+ E  ++
Sbjct: 514 GLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQ 552



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 153/280 (54%), Gaps = 4/280 (1%)

Query: 243 ADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           A +VF  ++E  G   + + F+ L++ +      S A++ F  +  H +     +   L 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + L        A A  +E++  G  P+V   N L++  CK+  + +A++LF +I ++GL 
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLR 257

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+++NTLI+ YCK G ++  F ++  M++  V PDV TY+ LI GL +EG ++    +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             E+ + G+    VT+  L+   C  G++   + +  +M +   +   P+++TYN LI G
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK---PDVITYNTLING 374

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+ G L +A  L+ E+ ++GL P++ TY ++ +   ++G
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 181/359 (50%), Gaps = 32/359 (8%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGI 255
           + GK + +S     +++ G     + +++L++ Y   G     Y +DA+  F+ + ++ +
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSG-----YFSDAIQCFRLVRKHNL 186

Query: 256 LPNEVTFNT---LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
              ++ F++   L D   K    S A   +EE+   G    V  +N L++ LC + K++E
Sbjct: 187 ---QIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  E+   GL+P VV+ N LING+CK   +++   L   + E  + P V TY+ LI+
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CKEG+++DA  +   M DRG++P+  T+  LI G    G  +    I  +++  G++ 
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TYN L+  LCK G  ++A  L+ EM    +    P+  TY +LI G C++G LE A 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEM---TQRGLKPDKFTYTMLIDGCCKEGDLESAL 420

Query: 493 GLLNELLEKGLIPNQTTY-----------QIVR-----EEMMEKGFIPDIEGHMYNISG 535
            +  E++++G+  +   +           Q++       EM+E G  PD   +   I G
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 74/292 (25%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
            H     + +Y ++ + LC    L EA                    +L+     +K   
Sbjct: 96  QHHFRLSIHSYCTMTHFLCTHKMLSEA-------------------QSLLQFVVSRKGKN 136

Query: 347 KARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            A  +F  + E +G   S + ++ L++AY   G   DA      +    +     +   L
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYL 196

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
              L +            E+++ G    +  +N+L+  LCK+ K  +A  L  E+    K
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI---GK 253

Query: 466 EKKWPNIVTYNVLIKGF-----------------------------------CQKGKLED 490
               P +V++N LI G+                                   C++G+L+D
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 491 ANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           AN L  E+ ++GL+PN  T+                  + ++M+ KG  PD+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 269/521 (51%), Gaps = 16/521 (3%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRAS 60
           P    +S+++ I   +  +H   L N +P+++          P  +L +F W + +    
Sbjct: 50  PTKPLHSSLKRILPSLTPNHLIDLINLNPHSL---------SPPSLLSFFKWLSTQHHFR 100

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
            S+     + H L   K   + +S L   V      S S++F ++     +  +++++  
Sbjct: 101 LSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTH-QSNLVFS 159

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +LM AY  +       + F+    + L+    SC  L   L+K          Y+E+   
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               ++  FN +++ LCK  K+N+A  +  ++   G+ P VV++N LI+GYCK G + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++     + M+EN + P+  T++ LI+G CK+  +  A K+F EM   G+    VT+ +L
Sbjct: 280 FRLK---RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ING CV G+ D  + +  +M+  G+KP+V+T N LING CK   + +A+ L  +++++GL
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY  LID  CKEG +E A  +R  M+  G+  D   +  LI+G  REG V     
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            + E++  G++    TY +++   CK G  K    LL EM   + +   P +VTYNVL+ 
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM---QCDGHVPGVVTYNVLLN 513

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C++G++++AN LL+ +L  G++P+  TY I+ E   + G
Sbjct: 514 GLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 266/554 (48%), Gaps = 54/554 (9%)

Query: 17  RNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVA 76
           R   W   + T    V+ ++     DP   + +F W+  +    HS       L +L+  
Sbjct: 83  RLEQW---RGTLQPAVVSRVLQRLKDPQTAIVFFVWA-GDRGFKHSTFTRNCFLQTLLEN 138

Query: 77  KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLAYVKNMKPH 133
               +I +     +  G +   S  +H +     SLC+ + I     ML  A V+  KP 
Sbjct: 139 GSSDRIPAMFERMLDAG-YAPDSYTYHLVIK---SLCQMNQIDKAFTMLDKAKVRGFKPE 194

Query: 134 LGF-----EAFKRAGDYGLKSSV-----------LSCNQLLRALVKEGKFEDVEYVYKEM 177
           +        AF + G   LK ++           ++ N ++    ++   +      KEM
Sbjct: 195 VSVYTILTRAFCKTGR--LKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEM 252

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             R++  ++ ++N +++GLCKA K +KAS+++ +M   GV+P  VT+N ++DG CK G  
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG-- 310

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            K  +A ++   M E    P+  T+NTLI G CK +N+  A  + +E  S G    VVTY
Sbjct: 311 -KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTY 369

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           + L +GLC  G++DEA  L  EM   G  PN+VT N LI+G CK    EKA  L + +  
Sbjct: 370 SILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS 429

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G  P V+TY  ++D  CKEGR++ A  M   ML RG  P V TY  L+ GL R G V+ 
Sbjct: 430 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 489

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             +I  E+V+    A  + Y  LV   CK  ++K+A  ++D +      +  P I  YN 
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI------RGTPYIDVYNA 543

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKG 521
           L+ G+C++G+L++   +  ++  +G +PN  TY IV                 E M   G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603

Query: 522 FIPDIEGHMYNISG 535
            +PD+  +   I G
Sbjct: 604 CVPDVVSYNIIIDG 617



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 221/426 (51%), Gaps = 42/426 (9%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I+ID L     K  K     E      D G+    ++ N ++  L K GKFE    +   
Sbjct: 266 ILIDGL----CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R    +  ++N +++GLCK   +++A D++++  S G  P VVTY+IL DG CK+G 
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR 381

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I + ++   + K+M   G  PN VT+NTLIDG CK      A ++ E + S G    VVT
Sbjct: 382 IDEAFE---LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  +++GLC +G+LD+A+ + + M+  G  P+V+T  AL+ G C+   V++A  +F ++ 
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498

Query: 357 EQGLS--------------------------------PSVITYNTLIDAYCKEGRMEDAF 384
            +  +                                P +  YN L+D YCKEGR+++  
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 558

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  RG +P++ TYN ++ GL + G V+     +  + + G    +V+YNI++  L
Sbjct: 559 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K  K K+A  +LD+M +       P+ VTYN L+  FC++ + +DA G+L  +++ G+ 
Sbjct: 619 FKASKPKEARQVLDQMIQAGIP---PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 675

Query: 505 PNQTTY 510
           P+  TY
Sbjct: 676 PDNVTY 681



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 246/478 (51%), Gaps = 26/478 (5%)

Query: 50  FCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALS 106
            C ++K  +AS        +LH +V     P   +F   +    K GKF    ++   ++
Sbjct: 271 LCKASKTDKASE-------MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323

Query: 107 --TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
              C  S C  + +I  L     K        +        G    V++ + L   L K 
Sbjct: 324 ERNCRPSCCTYNTLISGL----CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ ++   + KEM  +    NL ++N +++GLCKA K  KA +++E + S G  P VVTY
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            I++DG CK+G + K  K   + + M++ G  P+ +T+  L++G C+   +  A  +F+E
Sbjct: 440 TIIVDGLCKEGRLDKALK---MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S    A  + Y SL+NG C   +  EA  + D +  +   P +   NAL++G+CK+  
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGR 553

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++   +F+D++ +G  P++ TYN ++D  CK G++++AF    SM   G +PDV +YN 
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I GL +    +  R ++++++  G+    VTYN L+   CK+ +   AV +L  M K  
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ-TTYQIVREEMMEKG 521
            +   P+ VTYN LI G  Q  +L DA  L++E+L  G + +  TTY  + + + ++G
Sbjct: 674 VD---PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 205/361 (56%), Gaps = 11/361 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    KEG+ +++  V+++M  R    N+ ++N V++GLCK GK+++A   +E M S
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P VV+YNI+IDG  K     K  +A  V   M++ GI P+ VT+NTL+  FCK+E 
Sbjct: 602 AGCVPDVVSYNIIIDGLFKAS---KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS-N 333
              A+ + + M   G+    VTYN+LI+GL    +L +A  L  EM+ +G   +  T+ N
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I+  CK+  +++A +L D ++  G+  + +TYN  ID  CKEGR+++A ++ + M   
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--- 775

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILVGALCKDGKSKK 452
             L D  +Y  +I GL +   ++    +  E+V   G+     T+N+L+ A  K  +  +
Sbjct: 776 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A++LL  M +       P+++TYN++I   C+  K++ A  L +E+  +G++ +  +Y +
Sbjct: 836 ALTLLGLMVQ---RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892

Query: 513 V 513
           +
Sbjct: 893 L 893



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 42/203 (20%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           F+    K G+    S++   + T  D +   ++II +               E   RA  
Sbjct: 755 FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKA------------EQLDRA-- 800

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
                     ++L R +V                 + + +   +FN +++   K  +L++
Sbjct: 801 ----------SKLAREMVAV---------------KGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++  M   G SP V+TYN++I   CK   + K+ KA  +F +M   GI+ + V++  
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCK---LDKVDKAWELFDEMAVRGIVASSVSYTV 892

Query: 265 LIDGFCKDENISAAMKVFEEMGS 287
           LI G C       A++V EEM S
Sbjct: 893 LIYGLCGQGRGKEALQVLEEMAS 915


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 266/534 (49%), Gaps = 76/534 (14%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           HSL     ++H LV +++ P  ++ +   V+    + V  I  +L     +   N ++ D
Sbjct: 234 HSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVE-IVESLVLTYGNCGSNPLVFD 292

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  YV+  K   G EAF+     GL  S+ +CN LL  LVK G  +    +Y+E+ R 
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
            +++N+ + N ++N LCK  K+      + DM+  GV P VVTYN LI+ YC++G +   
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412

Query: 238 -----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                                        GK  +A  V  +M++ G+ P+  T+N L+  
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNS----------------------------- 299
            C+++N+  A ++F+EM S G+   +V++++                             
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532

Query: 300 ------LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
                 LI G C +G + EA+ +RDEM+  G   +VVT N ++NG CK+K++ +A  LF 
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFT 592

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +++E+G+ P   T+ TLI+ Y K+G M  A  +   M+ R + PDV TYN LI G  +  
Sbjct: 593 EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 652

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +E V  + N++++  +    ++Y IL+   C  G   +A  L DEM +   E     I+
Sbjct: 653 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE---ATII 709

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKGF 522
           T N ++KG+C+ G    A+  L+ +L KG++P+  TY       ++EE M++ F
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 257/508 (50%), Gaps = 75/508 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++++L   +K    +SFL    + G F  V T     +T  ++ CR  ++ +        
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVT----YNTLINAYCRQGLLEE-------- 411

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF--------------------- 167
                  FE        GLK  V + N ++  L K GK+                     
Sbjct: 412 ------AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 465

Query: 168 --------------EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
                          D E ++ EM  + +  +L SF+ ++  L K G L++A     DMK
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 525

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           + G++P  V Y ILI G+C+ G    M +A  V  +M+E G   + VT+NT+++G CK++
Sbjct: 526 NAGLAPDNVIYTILIGGFCRNG---VMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +S A ++F EM   G+     T+ +LING   DG +++AV L + M+   LKP+VVT N
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+GFCK   +EK   L++D+  + + P+ I+Y  LI+ YC  G + +AF + + M+++
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G    + T N ++ G  R GN       ++ ++  G+    +TYN L+    K+    +A
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
            +L++   KME     P+++TYNV++ GF ++G++++A  ++ +++E+G+ P+++TY   
Sbjct: 763 FALVN---KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819

Query: 513 ---------------VREEMMEKGFIPD 525
                          V +EM+++GF+PD
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 23/381 (6%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR----RIEL-------------NLDSF 189
            K S+ S + ++  LV+  +  D + V   M R+    R+E+             N   F
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + ++    +A KL +  +    +KS G+   +   N L+ G  K G +   ++   ++++
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE---IYQE 348

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +V +G+  N  T N +I+  CK++ I        +M   G+   VVTYN+LIN  C  G 
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+EA  L D M   GLKP V T NA+ING CK     +A+ + D++ + G+SP   TYN 
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+   C+   M DA  + + M  +GV+PD+ +++ LI  LS+ G ++       ++ N G
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    V Y IL+G  C++G   +A+ + DEM    ++    ++VTYN ++ G C++  L 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEML---EQGCXLDVVTYNTILNGLCKEKMLS 585

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A+ L  E+ E+G+ P+  T+
Sbjct: 586 EADELFTEMTERGVFPDFYTF 606



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +  + L+  + + + + +    F  +  +GL  S+   N+L+    K G ++ A+ + 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ++  GV  +V T N +I  L +   +E  ++ ++++   G+   +VTYN L+ A C+ 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G  ++A  L+D M     +   P + TYN +I G C+ GK   A G+L+E+L+ G+ P+ 
Sbjct: 407 GLLEEAFELMDSM---SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
            TY I                + +EM  +G +PD+
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDL 498



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           L + G+   +   N L+G L K G    A  +  E+ +   +    N+ T N++I   C+
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ---VNVYTLNIMINALCK 370

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             K+E+    L+++ EKG+ P+  TY  +      +G + +    M ++SG
Sbjct: 371 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 421


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 279/523 (53%), Gaps = 35/523 (6%)

Query: 8   TIEDITELIRNHHWSKLK---------NTDP-NTVILQLFNSDADPVLILRYFCWSTKEL 57
           ++ +IT L+ +H+W  L          NTD   +VILQ  N   DP  +L +F WS  ++
Sbjct: 26  SVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ--NQVGDPKRLLNFFYWSQHKM 83

Query: 58  ---RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG--KFTSVSTIFHALSTCSDSL 112
               A   L +   L  +L  +  Y      +   ++N       + +I     +C+ S 
Sbjct: 84  GTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGS- 142

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
             NS+I DMLM +Y K     +GF       F    ++  + S+LSCN LL  L+K  K 
Sbjct: 143 -PNSVIFDMLMDSYRK-----MGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E    V+  M   ++  ++ ++  +++  CK G +  A  ++ +M   G SP +VTYN++
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I G C+   +    +A  + + MV+ G++P+  T++ LI+GFC ++    A  +  EM  
Sbjct: 257 IGGLCRARLLD---EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+    +TYN+LI+G    G +++A  ++DEM+A G++ N++  N L+NG CK   +EK
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 373

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +  ++ E+G+ P   TY+ LI+ +C+   M  AF + + M  R + P V TY+ +I 
Sbjct: 374 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 433

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL R GN++G   I+ E+V NG++   V Y  L+ A  K+G+ +++  +L+   +M ++ 
Sbjct: 434 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE---RMREQG 490

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             P++  YN LI GFC+  ++E+A   L E+LE+ L PN  TY
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 223/414 (53%), Gaps = 28/414 (6%)

Query: 97  SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQ 156
           + S I + L  C +    N+I+ +M+M                      GLK + +    
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVM---------------------NGLKPNAVVYTT 465

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  KEG+ E+   + + M+ + I  ++  +N ++ G CKA ++ +A   + +M    
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P   TY   IDGY K G   +M  AD  F +M+  G+LPN   +  LI+G CK+ N++
Sbjct: 526 LRPNAHTYGAFIDGYSKAG---EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  VF  + S  +   V TY+ LI+GL  +GK+ EA  +  E+   GL PN  T N+LI
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK+  V+KA  L +++  +G++P ++TYN LID  CK G +E A  + + +  RG+ 
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TY  ++ G  +  N      ++ E++  G+      YN+++   CK+ K +KA+ L
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             EM     EK + + V++N LI+G+C+ GKL++AN LL E++EK  IPN  TY
Sbjct: 763 FQEML----EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 812



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 217/393 (55%), Gaps = 13/393 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GLK   ++ N L+   +++G  E    +  EM    IE NL  +N +LNG+CKAGK+ 
Sbjct: 313 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 372

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA +IM++M   GV P   TY++LI+G+C+   + + ++   +  +M +  + P  +T++
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE---LLDEMKKRKLAPTVLTYS 429

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+G C+  N+     +  EM  +G+    V Y +L+     +G+++E+  + + M   
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+V   N+LI GFCK K +E+AR    ++ E+ L P+  TY   ID Y K G ME A
Sbjct: 490 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
               N ML  GVLP+V  Y  LI G  +EGNV    ++   +++  +   + TY++L+  
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L ++GK  +A  +  E+   +++   PN  TYN LI G C++G ++ A+ LL E+  KG+
Sbjct: 610 LSRNGKMHEAFGIFSEL---QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 504 IPNQTTYQIVREEMMEKGFIP-------DIEGH 529
            P+  TY I+ + + + G I        DIEG 
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 699



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 36/439 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+++   LM A+ K  +        +R  + G+   V   N L+    K  + E+     
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 518

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  RR+  N  ++   ++G  KAG++  A     +M S GV P V  Y  LI+G+CK+
Sbjct: 519 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + + +   +VF+ ++   +L +  T++ LI G  ++  +  A  +F E+   G+    
Sbjct: 579 GNVTEAF---SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSLI+G C  G +D+A  L +EM   G+ P++VT N LI+G CK   +E+A+ LFDD
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I  +GL+P+ +TY  ++D YCK      AF +   ML RGV PD   YN ++    +E  
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 755

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------- 460
            E   ++  E++  G  A  V++N L+   CK GK ++A  LL+EM              
Sbjct: 756 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 814

Query: 461 ------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                              +M++    P   TY  L+ G+   G + + + L  E++ KG
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 503 LIPNQTTYQIVREEMMEKG 521
           + P++ TY ++ +    +G
Sbjct: 875 IEPDKMTYYVMIDAYCREG 893



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 223/421 (52%), Gaps = 11/421 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+  + K G+       F+ + +C   +  N  I   L+  + K       F  F+   
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCG--VLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 592

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              +   V + + L+  L + GK  +   ++ E++ + +  N  ++N +++G CK G ++
Sbjct: 593 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 652

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KAS ++E+M   G++P +VTYNILIDG CK G I    +A  +F D+   G+ PN VT+ 
Sbjct: 653 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI---ERAKNLFDDIEGRGLTPNCVTYA 709

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++DG+CK +N +AA ++ EEM   G+      YN ++N  C + K ++A+ L  EM+  
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 769

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G   + V+ N LI G+CK   +++A  L +++ E+   P+ +TY +LID  CK G M +A
Sbjct: 770 GF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 828

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M +R V+P   TY  L+ G    GN+  V  +  E+V  G+    +TY +++ A
Sbjct: 829 KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 888

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            C++G   +A  L DE+      K  P ++  Y+ LI+  C+K +  +   LLNE+ E G
Sbjct: 889 YCREGNVMEACKLKDEILV----KGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944

Query: 503 L 503
            
Sbjct: 945 F 945



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 51/367 (13%)

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           I++  +S   SP  V +++L+D Y K   +G + +A  VF         P+ ++ N+L+ 
Sbjct: 132 IVKCYRSCNGSPNSVIFDMLMDSYRK---MGFLVEAVNVFLGPKNFEFRPSLLSCNSLLG 188

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
              K   +    KVF+ M +H +   V TY ++I+  C  G + +A  +  EM   G  P
Sbjct: 189 DLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSP 248

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N+VT N +I G C+ +L+++A  L   + ++GL P + TY+ LI+ +C E R  +A  M 
Sbjct: 249 NLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLML 308

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+D G+ P+  TYN LI G  R+G++E    I +E+V  G+ A L+ +N L+  +CK 
Sbjct: 309 LEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 368

Query: 448 GKSKKAVSLLDEMF--------------------------------KMEKEKKWPNIVTY 475
           GK +KA+ ++ EM                                 +M+K K  P ++TY
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMME 519
           +V+I G C+ G L+  N +L E++  GL PN   Y                +++ E M E
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488

Query: 520 KGFIPDI 526
           +G +PD+
Sbjct: 489 QGILPDV 495



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 211/441 (47%), Gaps = 40/441 (9%)

Query: 91   KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
            K G  T   ++F  +   S  + ++     +L+    +N K H  F  F    + GL  +
Sbjct: 577  KEGNVTEAFSVFRFI--LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634

Query: 151  VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
              + N L+    K+G  +    + +EM  + I  ++ ++N +++GLCKAG++ +A ++ +
Sbjct: 635  AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 694

Query: 211  DMKSLGVSPKVVTYNILIDGYCKKG---------------GIG----------------- 238
            D++  G++P  VTY  ++DGYCK                 G+                  
Sbjct: 695  DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEE 754

Query: 239  KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            K  KA  +F++M+E G   + V+FNTLI+G+CK   +  A  + EEM         VTY 
Sbjct: 755  KFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYT 813

Query: 299  SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            SLI+  C  G + EA  L  EM    + P   T  +L++G+     + +   LF+++  +
Sbjct: 814  SLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAK 873

Query: 359  GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            G+ P  +TY  +IDAYC+EG + +A  +++ +L +G+   V+ Y+ LI  L ++     V
Sbjct: 874  GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV 933

Query: 419  RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNV 477
              ++NE+  +G R GL T +++       G   +A  +L  M K      W  N  +   
Sbjct: 934  LKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF----GWVSNTTSLGD 989

Query: 478  LIKGFCQKGKLEDANGLLNEL 498
            L+ G       ED++ LL ++
Sbjct: 990  LVDGNQNGANSEDSDNLLKQM 1010


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 266/534 (49%), Gaps = 76/534 (14%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           HSL     ++H LV +++ P  ++ +   V+    + V  I  +L     +   N ++ D
Sbjct: 130 HSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVE-IVESLVLTYGNCGSNPLVFD 188

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  YV+  K   G EAF+     GL  S+ +CN LL  LVK G  +    +Y+E+ R 
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
            +++N+ + N ++N LCK  K+      + DM+  GV P VVTYN LI+ YC++G +   
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308

Query: 238 -----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                                        GK  +A  V  +M++ G+ P+  T+N L+  
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNS----------------------------- 299
            C+++N+  A ++F+EM S G+   +V++++                             
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428

Query: 300 ------LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
                 LI G C +G + EA+ +RDEM+  G   +VVT N ++NG CK+K++ +A  LF 
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 488

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +++E+G+ P   T+ TLI+ Y K+G M  A  +   M+ R + PDV TYN LI G  +  
Sbjct: 489 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 548

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +E V  + N++++  +    ++Y IL+   C  G   +A  L DEM +   E     I+
Sbjct: 549 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE---ATII 605

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKGF 522
           T N ++KG+C+ G    A+  L+ +L KG++P+  TY       ++EE M++ F
Sbjct: 606 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 258/508 (50%), Gaps = 75/508 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++++L   +K    +SFL    + G F  V T     +T  ++ CR  ++ +        
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVT----YNTLINAYCRQGLLEE-------- 307

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF--------------------- 167
                  FE        GLK  V + N ++  L K GK+                     
Sbjct: 308 ------AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361

Query: 168 --------------EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
                          D E ++ EM  + +  +L SF+ ++  L K G L++A     DMK
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           + G++P  V Y ILI G+C+ G    M +A  V  +M+E G + + VT+NT+++G CK++
Sbjct: 422 NAGLAPDNVIYTILIGGFCRNG---VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +S A ++F EM   G+     T+ +LING   DG +++AV L + M+   LKP+VVT N
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+GFCK   +EK   L++D+  + + P+ I+Y  LI+ YC  G + +AF + + M+++
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G    + T N ++ G  R GN       ++ ++  G+    +TYN L+    K+    +A
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
            +L++   KME     P+++TYNV++ GF ++G++++A  ++ +++E+G+ P+++TY   
Sbjct: 659 FALVN---KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715

Query: 513 ---------------VREEMMEKGFIPD 525
                          V +EM+++GF+PD
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 23/381 (6%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR----RIEL-------------NLDSF 189
            K S+ S + ++  LV+  +  D + V   M R+    R+E+             N   F
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + ++    +A KL +  +    +KS G+   +   N L+ G  K G +   ++   ++++
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE---IYQE 244

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +V +G+  N  T N +I+  CK++ I        +M   G+   VVTYN+LIN  C  G 
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+EA  L D M   GLKP V T NA+ING CK     +A+ + D++ + G+SP   TYN 
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+   C+   M DA  + + M  +GV+PD+ +++ LI  LS+ G ++       ++ N G
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    V Y IL+G  C++G   +A+ + DEM    ++    ++VTYN ++ G C++  L 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEML---EQGCVLDVVTYNTILNGLCKEKMLS 481

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A+ L  E+ E+G+ P+  T+
Sbjct: 482 EADELFTEMTERGVFPDFYTF 502



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 19/215 (8%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +  + L+  + + + + +    F  +  +GL  S+   N+L+    K G ++ A+ + 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ++  GV  +V T N +I  L +   +E  ++ ++++   G+   +VTYN L+ A C+ 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G  ++A  L+D M     +   P + TYN +I G C+ GK   A G+L+E+L+ G+ P+ 
Sbjct: 303 GLLEEAFELMDSM---SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
            TY I                + +EM  +G +PD+
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDL 394



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           L + G+   +   N L+G L K G    A  +  E+ +   +    N+ T N++I   C+
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ---VNVYTLNIMINALCK 266

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             K+E+    L+++ EKG+ P+  TY  +      +G + +    M ++SG
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 317


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 238/465 (51%), Gaps = 31/465 (6%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           KE   + +++    ++H      K           V+NG   ++ T    LS     LCR
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS----GLCR 124

Query: 115 NSII---------------------IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           N ++                      D LM    K  K  +  + F+   +      V++
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            + L+  L K G+ ++   ++++M+    E ++ +F  +++GLCK  +L +A  ++E M+
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
               +P V+TY+ LIDG CK    G++  A  VFK M+  GI PN VT+N+LI GFC   
Sbjct: 245 DRNCTPNVITYSSLIDGLCK---TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            + +A+ + EEM + G    ++TYN+LI+GLC  G+  EA  L  +M A    P+V+T +
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI GFCK + ++ AR LFDD+ +Q + P V+T++TL++ YC  G ++DA  +   M+  
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
              PDV TY  L+ G  + G +   R ++  +   G +  +VTY  L+ A C+ GK   A
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             LL+EM         PN++TY  LI GFC  G LE+A  +L  L
Sbjct: 482 YKLLEEMV---GNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 219/399 (54%), Gaps = 6/399 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    ++  + +  K    ++ F++  + G   ++++ N LL  L + G  ++  
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EM+ R ++ +  S++ ++ GLCK GK++ A  + ED  +    P VV Y+ LI G 
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK    G++ +A  +F+ M EN   P+ VTF  L+DG CK + +  A +V E M      
Sbjct: 193 CK---TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY+SLI+GLC  G++ +A  +   M+  G++PNVVT N+LI+GFC    V+ A +L
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            ++++  G  P +ITYNTLID  CK GR  +A  +   M  +   PDV TY+CLI G  +
Sbjct: 310 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 369

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
              ++  R + ++++   +   +VT++ LV   C  G    A  LL+EM   +     P+
Sbjct: 370 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS---PD 426

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + TY  L+ GFC+ G++ +A  +L  + ++G  PN  TY
Sbjct: 427 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 231/417 (55%), Gaps = 45/417 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++   ++  L K  +  +    + +MK++    N  ++N ++NG CK  K+++A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++++MK  G++P VVTY+ +I G+C++  +   YK   +F+ MVENG +PN VT+NTL+ 
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYK---LFRQMVENGCMPNLVTYNTLLS 120

Query: 268 GFCK-----------DE------------------------NISAAMKVFEEMGSHGIAA 292
           G C+           DE                         I  A+KVFE+  +     
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VV Y++LI GLC  G+LDEA  L ++M  +  +P+VVT  AL++G CK   +++A+ + 
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + + ++  +P+VITY++LID  CK G++ DA  +   M+ RG+ P+V TYN LI G    
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW--P 470
             V+    +M E+   G    ++TYN L+  LCK G++ +A  L  +M     + K+  P
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-----KAKFCNP 355

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++TY+ LI GFC+  +++ A  L +++L++ ++P+  T+  + E     G + D E
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 225/452 (49%), Gaps = 43/452 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +    K G+      +F  +    +S   + +    LM    K  +     +  +   
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMR--ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D     +V++ + L+  L K G+  D + V+K M  R IE N+ ++N +++G C    ++
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +ME+M + G  P ++TYN LIDG CK    G+  +A+ +F DM      P+ +T++
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCK---TGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI GFCK E I  A  +F++M    +   VVT+++L+ G C  G +D+A  L +EM+AS
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
              P+V T  +L++GFCK   + +AR +   ++++G  P+V+TY  LIDA+C+ G+   A
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILVG 442
           + +   M+  GV P+V TY  LI G    G++E  R ++  L  +   +A +  Y +++ 
Sbjct: 482 YKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMD 541

Query: 443 ALCKDGKSK-----------------------------------KAVSLLDEMFKMEKEK 467
            LC+ G+                                     KA+ +L+EM    K +
Sbjct: 542 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 601

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
             PN   Y  +I+   ++G+ E+AN L +ELL
Sbjct: 602 --PNAEAYEAVIQELAREGRHEEANALADELL 631



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 34/207 (16%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+    K G+  +   V K M +R  + N+ ++  +++  C+AGK   A  ++E
Sbjct: 427 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLE 486

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------------- 237
           +M   GV P V+TY  LI G+C  G +                                 
Sbjct: 487 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRT 546

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVT 296
           G+M  A  + + + ++G  P    +  LI G C+ + +  AM+V EEM  S         
Sbjct: 547 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 606

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMAS 323
           Y ++I  L  +G+ +EA AL DE++ +
Sbjct: 607 YEAVIQELAREGRHEEANALADELLGN 633


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 239/465 (51%), Gaps = 31/465 (6%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           KE   + +++    ++H      K           V+NG   ++ T    LS     LCR
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS----GLCR 243

Query: 115 NSII---------------------IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           N ++                      D LM    K  K  +  + F+   +      V++
Sbjct: 244 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            + L+  L K G+ ++   ++++M+    E ++ +F  +++GLCK  +L +A  ++E M+
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
               +P V+TY+ LIDG CK    G++  A  VFK M+  GI PN VT+N+LI GFC   
Sbjct: 364 DRNCTPNVITYSSLIDGLCK---TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            + +A+ + EEM + G    ++TYN+LI+GLC  G+  EA  L  +M A    P+V+T +
Sbjct: 421 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 480

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI GFCK + ++ AR LFDD+ +Q + P V+T++TL++ YC  G ++DA  +   M+  
Sbjct: 481 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 540

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
              PDV TY  L+ G  + G +   R ++  +   G +  +VTY  L+ A C+ GK   A
Sbjct: 541 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 600

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             LL+EM     +   PN++TY  LI GFC  G LE+A  +L  L
Sbjct: 601 YRLLEEMVGNGVQ---PNVITYRSLIGGFCGTGDLEEARKILERL 642



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 280/542 (51%), Gaps = 67/542 (12%)

Query: 41  ADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST 100
           +DP   LR+F W++K+    H++    RL  +L+ A++   I    H+ +KNG    ++ 
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARR---IDETCHI-LKNGWPPGITP 57

Query: 101 IFHALSTCSDSLCRNSIIIDMLML------------AYVKNMKPHLGFEA--FKRAGDY- 145
                +     LC++  +     L            A + N   H   +A    +A DY 
Sbjct: 58  NVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF 117

Query: 146 ---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
                + +V++   ++  L K  +  +    + +MK++    N  ++N ++NG CK  K+
Sbjct: 118 RSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           ++A  ++++MK  G++P VVTY+ +I G+C++  +   YK   +F+ MVENG +PN VT+
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYK---LFRQMVENGCMPNLVTY 234

Query: 263 NTLIDGFCK-----------DE------------------------NISAAMKVFEEMGS 287
           NTL+ G C+           DE                         I  A+KVFE+  +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                 VV Y++LI GLC  G+LDEA  L ++M  +  +P+VVT  AL++G CK   +++
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ + + + ++  +P+VITY++LID  CK G++ DA  +   M+ RG+ P+V TYN LI 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G      V+    +M E+   G    ++TYN L+  LCK G++ +A  L  +M     + 
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-----KA 469

Query: 468 KW--PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           K+  P+++TY+ LI GFC+  +++ A  L +++L++ ++P+  T+  + E     G + D
Sbjct: 470 KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDD 529

Query: 526 IE 527
            E
Sbjct: 530 AE 531



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 222/410 (54%), Gaps = 6/410 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    ++  + +  K    ++ F++  + G   ++++ N LL  L + G  ++  
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EM+ R ++ +  S++ ++ GLCK GK++ A  + ED  +    P VV Y+ LI G 
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G   ++ +A  +F+ M EN   P+ VTF  L+DG CK + +  A +V E M      
Sbjct: 312 CKAG---RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY+SLI+GLC  G++ +A  +   M+  G++PNVVT N+LI+GFC    V+ A +L
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            ++++  G  P +ITYNTLID  CK GR  +A  +   M  +   PDV TY+CLI G  +
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
              ++  R + ++++   +   +VT++ LV   C  G    A  LL+EM   +     P+
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS---PD 545

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + TY  L+ GFC+ G++ +A  +L  + ++G  PN  TY  + +     G
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 199/372 (53%), Gaps = 5/372 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++  +   +  V++   L+  L K  + ++ + V + M+ R    N+ +++ +++GLCK
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 383

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++  A ++ + M   G+ P VVTYN LI G+C   G+     A  + ++M   G LP+
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS---ALLLMEEMTATGCLPD 440

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+NTLIDG CK      A ++F +M +      V+TY+ LI G C   ++D A  L D
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M+   + P+VVT + L+ G+C   LV+ A  L +++     SP V TY +L+D +CK G
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           RM +A  +   M  RG  P+V TY  LI    R G       ++ E+V NG++  ++TY 
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+G  C  G  ++A  +L+ + + E  K   ++  Y V++ G C+ G++  A  LL  +
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKA--DMFAYRVMMDGLCRTGRMSAALELLEAI 678

Query: 499 LEKGLIPNQTTY 510
            + G  P    Y
Sbjct: 679 KQSGTPPRHDIY 690



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 223/447 (49%), Gaps = 43/447 (9%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             K G+      +F  +    +S   + +    LM    K  +     +  +   D    
Sbjct: 311 LCKAGRLDEACKLFEKMR--ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V++ + L+  L K G+  D + V+K M  R IE N+ ++N +++G C    ++ A  +
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           ME+M + G  P ++TYN LIDG CK    G+  +A+ +F DM      P+ +T++ LI G
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCK---TGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           FCK E I  A  +F++M    +   VVT+++L+ G C  G +D+A  L +EM+AS   P+
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V T  +L++GFCK   + +AR +   ++++G  P+V+TY  LIDA+C+ G+   A+ +  
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILVGALCKD 447
            M+  GV P+V TY  LI G    G++E  R I+  L  +   +A +  Y +++  LC+ 
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRT 665

Query: 448 GKSK-----------------------------------KAVSLLDEMFKMEKEKKWPNI 472
           G+                                     KA+ +L+EM    K +  PN 
Sbjct: 666 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR--PNA 723

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELL 499
             Y  +I+   ++G+ E+AN L +ELL
Sbjct: 724 EAYEAVIQELAREGRHEEANALADELL 750



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 34/207 (16%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+    K G+  +   V K M +R  + N+ ++  +++  C+AGK   A  ++E
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------------- 237
           +M   GV P V+TY  LI G+C  G +                                 
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRT 665

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVT 296
           G+M  A  + + + ++G  P    +  LI G C+ + +  AM+V EEM  S         
Sbjct: 666 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 725

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMAS 323
           Y ++I  L  +G+ +EA AL DE++ +
Sbjct: 726 YEAVIQELAREGRHEEANALADELLGN 752


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/487 (32%), Positives = 238/487 (48%), Gaps = 71/487 (14%)

Query: 92  NGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           N    S+  +F+ L      L  +  ++ D+L+ A  +  +    FE F      G+   
Sbjct: 96  NSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPH 155

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +CN +L   +K  + E    +Y EM R RI+ ++ +FN ++N LCK GKL KA + + 
Sbjct: 156 VHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIG 215

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------------G 238
            M++LG+ P VVTYN +I GYC +G +                                G
Sbjct: 216 LMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEG 275

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ +A  + + M E G+ P  VT+NTLIDG+C   N+  A    ++M   G+   V TYN
Sbjct: 276 KLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYN 335

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LI+ L +D K+DEA  +  EM   GL P+ VT N LING+C+   V+KA  L D++  +
Sbjct: 336 MLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK 395

Query: 359 GLSPSVITY-----------------------------------NTLIDAYCKEGRMEDA 383
           G+ P+ +TY                                   N LID +C  G M+ A
Sbjct: 396 GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRA 455

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           FAM   M    V+PD  T+N L+ G  REG VE  R ++ E+ + G++   ++YN L+  
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
             K G  K A  + DEM  +      P ++TYN LI+G C+  + + A  LL E++ KG+
Sbjct: 516 YSKRGDMKDAFRVRDEMLSIGFN---PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572

Query: 504 IPNQTTY 510
            PN  TY
Sbjct: 573 TPNDNTY 579



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 201/368 (54%), Gaps = 35/368 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K +V++ N ++      G+ E    ++  MK R ++ +  ++   ++G+CK GKL +A
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG--------------------------- 238
           S ++E MK +G+ P  VTYN LIDGYC KG +                            
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340

Query: 239 -----KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                KM +AD + K+M E G++P+ VT+N LI+G+C+  N+  A  + +EM S GI   
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            VTY SLI  L   G++ +A  L ++++  G+ P+++  NALI+G C    +++A  +  
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ +  + P  +T+NTL+   C+EG++E A  +   M  RG+ PD  +YN LI+G S+ G
Sbjct: 461 EMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRG 520

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + +E+++ G    L+TYN L+  LCK+ +   A  LL EM     +   PN  
Sbjct: 521 DMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMI---SKGITPNDN 577

Query: 474 TYNVLIKG 481
           TY  LI+G
Sbjct: 578 TYLSLIEG 585



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 202/389 (51%), Gaps = 28/389 (7%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCN------------QLLRALVKEGKFEDVEYVYKEMKRR 180
           H+GF      GD  +KS  L+              QLL+  +  G +  +  V+ E+   
Sbjct: 60  HIGF------GDLDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYS-IREVFNELGVA 112

Query: 181 RIELNLDSF---NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           R  L + ++   + ++   C+  + + A +  + MK  GV P V   N ++  + K    
Sbjct: 113 RGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSN-- 170

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            +  KA  ++ +M    I  + VTFN +I+  CK+  +  A +    M + GI   VVTY
Sbjct: 171 -RTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTY 229

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N++I+G C  G+++ A  + D M   G+KP+  T  + I+G CK+  +E+A  + + + E
Sbjct: 230 NTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKE 289

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            GL P+ +TYNTLID YC +G +E AF  R+ M+  G++P VSTYN LI  L  +  ++ 
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I+ E+   G+    VTYNIL+   C+ G  KKA +L DEM     +   P  VTY  
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI---SKGIQPTRVTYTS 406

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           LI    ++G+++ A+ L  +++ KG+ P+
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPD 435



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 178/333 (53%), Gaps = 8/333 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           SF+    K GK    S +   +      L   ++  + L+  Y       + F+   +  
Sbjct: 266 SFISGMCKEGKLEEASGMLEKMKEIG--LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL  +V + N L+ AL  + K ++ + + KEM  + +  +  ++N ++NG C+ G + 
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVK 383

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  + ++M S G+ P  VTY  LI    K+G   +M +AD +F+ +V  GI P+ + FN
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG---RMKQADDLFEKIVRKGIFPDLIMFN 440

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDG C + N+  A  + +EM    +    VT+N+L+ G C +GK++ A  L +EM + 
Sbjct: 441 ALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+KP+ ++ N LI+G+ K+  ++ A  + D++   G +P+++TYN LI   CK    + A
Sbjct: 501 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHA 560

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             +   M+ +G+ P+ +TY  LI G+   GNVE
Sbjct: 561 EQLLKEMISKGITPNDNTYLSLIEGI---GNVE 590



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 139/268 (51%), Gaps = 28/268 (10%)

Query: 280 KVFEEMGSHGIAAGV------VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +VF E+G   +A GV      V Y+ LI   C   + D+A    D M   G+ P+V   N
Sbjct: 104 EVFNELG---VARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACN 160

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +++ F K    EKA VL+ ++    +  SV+T+N +I+  CKEG+++ A      M   
Sbjct: 161 DMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL 220

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P+V TYN +I G    G VEG R I + +   G++    TY   +  +CK+GK ++A
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
             +L+   KM++    P  VTYN LI G+C KG LE A    ++++ +GL+P  +TY + 
Sbjct: 281 SGMLE---KMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337

Query: 513 ---------------VREEMMEKGFIPD 525
                          + +EM EKG +PD
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPD 365



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 3/166 (1%)

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + + Y+ LI A C+  R +DAF   + M  +GV+P V   N +++   +    E    + 
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+    +++ +VT+NI++  LCK+GK KKA   +     ME     PN+VTYN +I G+
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIG---LMEALGIKPNVVTYNTIIHGY 236

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           C +G++E A  + + +  +G+ P+  TY      M ++G + +  G
Sbjct: 237 CSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 263/530 (49%), Gaps = 21/530 (3%)

Query: 4   SANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSL 63
           S N  ++ I   +   H SKL   +P  +          P  +L +F          H+L
Sbjct: 69  SENPRLKRILPSLTPRHVSKLITLNPLCL---------PPSSLLSFFNHLASRPPFRHTL 119

Query: 64  LLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHA----LSTCSDSLCRNSIII 119
                +LH L + +  P+  S +   V      S ST+F +    +           ++ 
Sbjct: 120 HSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVF 179

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK--EGKFEDVEYVYKEM 177
           D L+ AYV +       + F+          +  C  LLR +V+    + E    +Y E+
Sbjct: 180 DALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEV 239

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
                   +  FN +++G CKAG +  A  + +++   G+ P VV++N LI G CK G +
Sbjct: 240 LDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDV 299

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            + ++   V   M   G+ P+  TF+ LI+G CK+  +     +F+EM   G+    VT+
Sbjct: 300 EEGFRLKGV---MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +LI+G C  GK+D A+     M+A G++P++VT NALING CK   +++AR L ++++ 
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            GL P  IT+ TLID  CK+G ME A  ++  M++ G+  D   +  LI+GL REG V  
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              ++ ++++ G +    TY +++   CK G  K    LL EM   + +   P +VTYN 
Sbjct: 477 AGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM---QSDGHVPGVVTYNA 533

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           L+ G C++G++++A  LL+ +L  G+ PN  TY I+ +   + G   D++
Sbjct: 534 LMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVD 583



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 6/298 (2%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +C +      L+    K  +   G   F      GL  + ++   L+    K GK +
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
                ++ M  + +  +L ++N ++NGLCK G L +A  ++ +M + G+ P  +T+  LI
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DG CK    G M  A  + + MVE GI  ++V F  LI G C++  +  A ++  +M S 
Sbjct: 431 DGCCKD---GDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G      TY  +I+  C  G +     L  EM + G  P VVT NAL+NG CK+  ++ A
Sbjct: 488 GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA 547

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           ++L D +   G++P+ ITYN L+D + K G   D   + NS  ++G++ D ++Y  L+
Sbjct: 548 KMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV-DIFNS--EKGLVTDYASYTALV 602



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 10/297 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++   K G+    S +F  +  C   L  N +    L+    K  K  L  + F+   
Sbjct: 323 ALINGLCKEGRLDEGSLLFDEM--CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMML 380

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++  +++ N L+  L K G  ++   +  EM    ++ +  +F  +++G CK G + 
Sbjct: 381 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDME 440

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I   M   G+    V +  LI G C++   G+++ A  +  DM+  G  P++ T+ 
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCRE---GRVHDAGRMLTDMLSAGFKPDDPTYT 497

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FCK  ++    K+ +EM S G   GVVTYN+L+NGLC  G++  A  L D M+  
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDI-SEQGLSPSVITYNTLIDAYCKEGR 379
           G+ PN +T N L++G  K      + V  D   SE+GL     +Y  L++   K  +
Sbjct: 558 GVAPNDITYNILLDGHSK----HGSSVDVDIFNSEKGLVTDYASYTALVNESSKTSK 610


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/576 (30%), Positives = 286/576 (49%), Gaps = 62/576 (10%)

Query: 14  ELIRNHHWSKLKNTDPNTVILQLFNS----DADPVLILRYFCWSTKELRASHSLLLTGRL 69
           E I+   W  +K+  PN     L ++      +P+L+       +   R  H L L  R 
Sbjct: 44  EYIQTSQWHFIKHLAPNLTPSLLSSTLPTLHQNPILVETLL---SHLHRHPHCLDLNTRC 100

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVK 128
           + +L +  + P  +   H+       T+ + IF+ LS   + L  + +++ D+L+ AY +
Sbjct: 101 I-TLCILYRLPSPKPSFHILQPILHTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQ 159

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             KP    E      +  +     +CN LL  L+K  K +   +VY+EM +  I+ ++ +
Sbjct: 160 FRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVT 219

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---GIGKMYK--- 242
           FN ++N LC+ GK  KA D +  M+  GV P VVTYN +I+GYC +G      K++K   
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMK 279

Query: 243 --------------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                     A  V   ++E+G++PN VT+N LIDG C   ++ 
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLD 339

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A    +EM + GI A V TYN LI+ L ++ +++EA  +  EM   G++P+VVT N  I
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+C+    +KA  LFD++ E+ + P+V TY +LID + K  RM +A       +  G+L
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+  +N LI G    GN++    ++ E+ N  +    VT+N L+   C++ K ++A  L
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 457 LDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           LDEM    KE+   P+ ++YN LI G+ ++G ++DA  + +E+L  G  P   TY  + +
Sbjct: 520 LDEM----KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQ 575

Query: 516 ----------------EMMEKGFIPDIEGHMYNISG 535
                           EM  KG  PD   ++Y I  
Sbjct: 576 GYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 174/300 (58%), Gaps = 5/300 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYK-EMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           GL  + ++ N L+     +G   D  + Y+ EM  R I  ++ ++N +++ L    ++ +
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDL-DKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEE 375

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A D++++M+  GV P VVTYNI I+GYC+    G   KA ++F +MVE  I P   T+ +
Sbjct: 376 AEDMIKEMREKGVEPDVVTYNIQINGYCR---CGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID F K   +S A + F++    G+   ++ +N+LI+G CV+G +D A  L  EM  + 
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+ VT N L+ G+C+++ VE+A+ L D++ E+G+ P  I+YNTLI  Y K G M+DA 
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + ML  G  P + TYN LI G S+ G  +    ++ E+ + G+     TY  ++ A+
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 181/610 (29%), Positives = 294/610 (48%), Gaps = 92/610 (15%)

Query: 1   PFCSANSTIEDITELIRNHHWS---KLKNTDPNTVILQLFNSDADP-------------- 43
           PF   +     +T+    HH S   K +  +P   IL+ F S   P              
Sbjct: 48  PFPDYSPRKPSVTDTDFVHHISTTIKQRRAEPFRRILKPFESKFRPDHLIWVLMSIRDDY 107

Query: 44  VLILRYFCWS--------------------TKELRASHSLLL-----------------T 66
            L+L +F W+                    +K+LR +H L+                  T
Sbjct: 108 KLVLDFFDWARLRRDPSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFT 167

Query: 67  GRLLHSLVVAKKYPKIRS-FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM---- 121
            RL+++      +P +   F  + V+ G       +F       D L    +++ +    
Sbjct: 168 ERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLF-------DKLLNYGVLVSVDSCN 220

Query: 122 LMLAYVKNMKPHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           L LA + N    +   F  F+   + G+  + +S N +L  L + GK ++   +  +M+ 
Sbjct: 221 LFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEF 280

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R    ++ S++ +++G C+  +L K   +ME+++  G+ P   TYN +I   CK    G+
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCK---TGR 337

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + +A+ V + M    I P+ V + TLI GF K  N+S   K+F+EM    I    VTY S
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+GLC  GK+ EA  L  EM++ GLKP+ VT  ALI+G+CK   +++A  L + + E+G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L+P+V+TY  L+D  CK G ++ A  + + M ++G+ P+V TYN LI GL + GN+E   
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +M E+   G     +TY  ++ A CK G+  KA  LL  M     +   P IVT+NVL+
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ---PTIVTFNVLM 574

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------------MMEKGFI 523
            GFC  G LED   L+  +L+KG++PN TT+  + ++                M  +G +
Sbjct: 575 NGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVV 634

Query: 524 PDIEGHMYNI 533
           PD   + YNI
Sbjct: 635 PDT--NTYNI 642



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 126/354 (35%), Positives = 199/354 (56%), Gaps = 9/354 (2%)

Query: 170 VEY-VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           VEY ++ EMKR++I  +  ++  +++GLC+AGK+ +A  +  +M S G+ P  VTY  LI
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK G   +M +A ++   MVE G+ PN VT+  L+DG CK   +  A ++  EM   
Sbjct: 435 DGYCKAG---EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V TYN+LINGLC  G +++AV L +EM  +G  P+ +T   +++ +CK   + KA
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L   + ++GL P+++T+N L++ +C  G +ED   +   MLD+G++P+ +T+N L+  
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
                N+     I   +   G+     TYNIL+   CK    K+A  L  EM     EK 
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV----EKG 667

Query: 469 WP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +     +YN LIKGF ++ K E+A  L  E+   G I  +  Y I  +   E+G
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEG 721



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 215/405 (53%), Gaps = 26/405 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +  + N ++  L K G+  + E V + MK +RI  +   +  +++G  K+G ++  
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++MK   + P  VTY  +I G C+ G   K+ +A  +F +M+  G+ P+EVT+  L
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAG---KVVEARKLFSEMLSKGLKPDEVTYTAL 433

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK   +  A  +  +M   G+   VVTY +L++GLC  G++D A  L  EM   GL
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNV T NALING CK   +E+A  L +++   G  P  ITY T++DAYCK G M  A  
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHE 553

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLD+G+ P + T+N L+ G    G +E    ++  +++ G+     T+N L+   C
Sbjct: 554 LLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYC 613

Query: 446 KDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                +  +    E++K M  +   P+  TYN+LIKG C+   +++A  L  E++EKG  
Sbjct: 614 IRNNMRATI----EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
               +Y                + + EEM   GFI + E  +Y+I
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKE--IYDI 712



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 167/314 (53%), Gaps = 3/314 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++   L+    K G+ ++   ++ +M  + +  N+ ++  +++GLCK G+++ A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           ++++ +M   G+ P V TYN LI+G CK G I +  K   + ++M   G  P+ +T+ T+
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK---LMEEMDLAGFFPDTITYTTI 538

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D +CK   ++ A ++   M   G+   +VT+N L+NG C+ G L++   L   M+  G+
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N+L+  +C +  +     ++  +  QG+ P   TYN LI  +CK   M++A+ 
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWF 658

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+++G     ++YN LI G  +    E  R +  E+  +G  A    Y+I V    
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNY 718

Query: 446 KDGKSKKAVSLLDE 459
           ++G  +  + L DE
Sbjct: 719 EEGNWENTLELCDE 732


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 259/529 (48%), Gaps = 41/529 (7%)

Query: 19  HHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK 78
           HH S   N  P      L  S  +  LIL++  W+        +L      LH L   K 
Sbjct: 40  HHLSA--NFTPEAASNLLLKSQNNQELILKFLTWANPH--QFFTLRCKCITLHILTRFKL 95

Query: 79  YPKIRSFLH-MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFE 137
           Y   ++    +  K       S +F +L    D     S + D+++ +Y +         
Sbjct: 96  YKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALS 155

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
               +  +G    VLS N +L A ++  +     E V+KEM + ++  N+ ++N ++ G 
Sbjct: 156 IVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGF 215

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C AG L+ A    + M+  G  P VVTYN LIDGYCK   I                   
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNL 275

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+M +   V  +M + G   +EVT+NTLI G+CK+ N   A+ +  E
Sbjct: 276 ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  HG++  V+TY SLI+ +C  G ++ A    D+M   GL PN  T   L++GF +K  
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           + +A  +  ++ + G SPSV+TYN LI+ +C  G+M DA A+   M ++G+ PDV +Y+ 
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +++G  R  +V+    +  ++V  G++   +TY+ L+   C+  ++K+A  L DEM ++ 
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
                P+  TY  LI  +C +G L+ A  L NE++EKG++P+  TY ++
Sbjct: 516 LP---PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 233/414 (56%), Gaps = 21/414 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+  Y K  K   GFE  +     GL+ +++S N ++  L +EG+ +++ +V 
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM +R   L+  ++N ++ G CK G  ++A  +  +M   G+SP V+TY  LI   CK 
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G    M +A      M   G+ PNE T+ TL+DGF +   ++ A +V +EM  +G +  V
Sbjct: 359 GN---MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSV 415

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LING C+ GK+ +A+A+ ++M   GL P+VV+ + +++GFC+   V++A  +   
Sbjct: 416 VTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRK 475

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+ P  ITY++LI  +C++ R ++A  + + ML  G+ PD  TY  LI     EG+
Sbjct: 476 MVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    + NE+V  G+   +VTY++L+  L K  ++++A  LL ++F    E+  P+ VT
Sbjct: 536 LQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF---YEESVPSDVT 592

Query: 475 YNV---------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           Y+                LIKGFC KG + +A+ +   +LEK   P+ T Y ++
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVM 646



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 192/376 (51%), Gaps = 23/376 (6%)

Query: 168 EDVEYVYKEMKRRRIELNLDS--FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ED   V++ ++      N  S  F+ V+    +   ++KA  I+   ++ G  P V++YN
Sbjct: 114 EDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYN 173

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            ++D   +      +  A+ VFK+M+++ + PN  T+N LI GFC   N+  A++ F+ M
Sbjct: 174 AVLDATIRSKR--NISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRM 231

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VVTYN+LI+G C   K+D+   L   M   GL+PN+++ N +ING C++  +
Sbjct: 232 EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM 291

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++   +  +++++G S   +TYNTLI  YCKEG    A  M   ML  G+ P V TY  L
Sbjct: 292 KEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSL 351

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I  + + GN+      ++++   G+     TY  LV    + G   +A  +L EM     
Sbjct: 352 IHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI---D 408

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI------------- 512
               P++VTYN LI G C  GK+ DA  +L ++ EKGL P+  +Y               
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDE 468

Query: 513 ---VREEMMEKGFIPD 525
              V+ +M+ KG  PD
Sbjct: 469 ALRVKRKMVAKGIKPD 484



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 20/300 (6%)

Query: 253 NGILPNEVTFNTLIDGFCKDE-NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +G +P  +++N ++D   + + NIS A  VF+EM    ++  V TYN LI G C+ G LD
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLD 222

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+   D M   G  PNVVT N LI+G+CK + ++    L   ++ +GL P++I+YN +I
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVI 282

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  C+EGRM++   +   M  RG   D  TYN LI G  +EGN      +  E++ +G+ 
Sbjct: 283 NGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS 342

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             ++TY  L+ ++CK G   +A   LD+M         PN  TY  L+ GF QKG + +A
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQM---RVRGLCPNERTYTTLVDGFSQKGYMNEA 399

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             +L E+++ G  P+  TY                  V E+M EKG  PD+  +   +SG
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 173/364 (47%), Gaps = 24/364 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H   K G     +     +      LC N      L+  + +    +  +   K   
Sbjct: 350 SLIHSMCKAGNMNRATEFLDQMRV--RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   SV++ N L+      GK  D   V ++MK + +  ++ S++ VL+G C++  ++
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVD 467

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +   M + G+ P  +TY+ LI G+C++    +  +A  +F +M+  G+ P+E T+ 
Sbjct: 468 EALRVKRKMVAKGIKPDTITYSSLIQGFCEQ---RRTKEACDLFDEMLRVGLPPDEFTYT 524

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+ +C + ++  A+++  EM   G+   VVTY+ LINGL    +  EA  L  ++   
Sbjct: 525 ALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYE 584

Query: 324 GLKPNVVTSN---------------ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
              P+ VT +               +LI GFC K ++ +A  +F+ + E+   P    YN
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYN 644

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +I  +C+ G +  A+++   M+  G L    T   L+  L +EG V    N +N ++ N
Sbjct: 645 VMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKV----NELNSVIAN 700

Query: 429 GMRA 432
            +R+
Sbjct: 701 VLRS 704



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 4/161 (2%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI-AGLSREGNVEGVRNIMNEL 425
           ++ ++ +Y +   ++ A ++ +     G +P V +YN ++ A +  + N+    N+  E+
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           + + +   + TYNIL+   C  G    A+   D   +MEK+   PN+VTYN LI G+C+ 
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFD---RMEKKGCLPNVVTYNTLIDGYCKL 253

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            K++D   LL  +  KGL PN  +Y +V   +  +G + +I
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEI 294


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 237/405 (58%), Gaps = 22/405 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+     G+   V S N L+    + G+ E+    YKEM+ RR+  ++ SF+ ++   
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            + G+++ A++ + +M+  G+ P  V Y ++I G+C+ G    M +A  V  +MV  G L
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAG---LMLEALRVRDEMVAFGCL 366

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VT+NTL++G CK+  +S A ++  EM   G+   + T+ +LI+G C DG +++A+  
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D +    L+P++VT N LI+G C++  + KA  L+DD+  + + P+ +TY+ LID++C+
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCE 486

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G++++AFA  + M+++G++P++ TYN +I G  R GNV   +  + ++ ++ +   L+T
Sbjct: 487 KGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLIT 546

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+    K+GK  +A +LL     ME E   P+ VTYN++I GF   G +++A+ +  
Sbjct: 547 YNTLIHGYVKEGKMHEAFNLLK---IMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           ++  +G+ P++ TY                  + +EM++KG  PD
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 226/428 (52%), Gaps = 41/428 (9%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFK----------------------RAGDYGLKSS----V 151
           + D+L+  Y ++ KP   FEAF+                      RAG   L +     V
Sbjct: 91  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLV 150

Query: 152 LSCNQ---------LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           LS N          ++ +  K  +F +V+ V  EM++R +  ++ + N +++   +AG +
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDV 210

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  +++ M S G+ P +VTYN ++ G  + G   +  KA  VF+ M   G+ P+  +F
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG---RWDKAREVFRAMDACGVAPDVRSF 267

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI GFC+   +  A++ ++EM    +   VV+++ LI      G++D A     EM  
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL P+ V    +I GFC+  L+ +A  + D++   G  P V+TYNTL++  CKE R+ D
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N M +RGV PD+ T+  LI G  R+GN+E      + + +  +R  +VTYN L+ 
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            +C+ G   KA  L D+M   E    +PN VTY++LI   C+KG++++A   L+E++ KG
Sbjct: 448 GMCRQGDLGKANELWDDMHSRE---IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 503 LIPNQTTY 510
           ++PN  TY
Sbjct: 505 IVPNIMTY 512



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 127/241 (52%), Gaps = 3/241 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y ++       + F    D  L+  +++ N L+  + ++G       ++ +M  R 
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  N  +++ +++  C+ G+++ A   +++M + G+ P ++TYN +I GYC+ G +    
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVS--- 526

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           K       M  + ++P+ +T+NTLI G+ K+  +  A  + + M +  +    VTYN +I
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G  V G + EA  +  +M A G++P+  T  ++ING       +K+  L D++ ++GL+
Sbjct: 587 SGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646

Query: 362 P 362
           P
Sbjct: 647 P 647



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 19/247 (7%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           T N +++  C   +  E   +  EM    + P+VVT N +++   +   VE A  L D +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +G+ P ++TYN+++    + GR + A  +  +M   GV PDV ++N LI G  R G +
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E       E+    +   +V+++ L+G   + G+   A   L EM +       P+ V Y
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF---GLMPDGVIY 337

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMME 519
            ++I GFC+ G + +A  + +E++  G +P+  TY                  +  EM E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 520 KGFIPDI 526
           +G  PD+
Sbjct: 398 RGVPPDL 404



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    ++ LI  Y +  +  +AF     +LD  V    +  N L+A LSR G      +
Sbjct: 86  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTAD 145

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
               ++++       T NI+V + CK  +  +  +++ E   MEK   +P++VT+NV++ 
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISE---MEKRCVFPDVVTHNVMVD 202

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              + G +E A  L++ ++ KG+ P   TY  V + ++  G
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG 243



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D +  + I  + L+  YVK  K H  F   K   +  ++   ++ N ++      G  ++
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            ++VYK+M  R IE +  ++  ++NG   AG   K+  + ++M   G++P
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 160/452 (35%), Positives = 238/452 (52%), Gaps = 55/452 (12%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV---EYV 173
           +I+D  + AYV   +PH   + F R     LK ++L+CN L+ ALV+      V   + +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + ++ +  +++N ++FN ++ G C   KL++A  ++  MK     P  V+YN ++D  CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           KG   K+ +A  +  DM  NG+LPN  TFN L+ G+CK   +  A +V + M  + +   
Sbjct: 260 KG---KLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPD 316

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF--CKKKLVEKARVL 351
           V TYN LI GLC DGK+DEA  L+DEM    L P+VVT N LING   C   L  K   L
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL--KGFEL 374

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D +  +G+ P+ +TYN ++  Y KEG+M++A      M + G  PD  T+N LI G  +
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC-------------------------- 445
            G +     +M+E+   G++   VT N ++  LC                          
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 446 ---------KDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLL 495
                    KDGKS +A+ L DEM    KEK+  P+I+TYN +I G C  GK + +   L
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEM----KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 496 NELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           NELLE GL+P++TTY  +     RE  +EK F
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAF 582



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 208/383 (54%), Gaps = 6/383 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V + N L+  L K+GK ++   +  EM+  ++  ++ ++N ++NG        K  ++++
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELID 376

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M+  GV P  VTYN+++  Y K+G   KM  A    + M E+G  P+ VTFNTLI+G+C
Sbjct: 377 KMEGKGVKPNAVTYNVVVKWYVKEG---KMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +S A ++ +EM   G+    VT N++++ LC + KLD+A  L       G   + V
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 493

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +   LI G+ K     +A  L+D++ E+ + PS+ITYNT+I   C  G+ + +    N +
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L+ G++PD +TYN +I G  REG VE      N++V    +  L T NIL+  LC +G  
Sbjct: 554 LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGML 613

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            KA+ L +       + K  + VTYN +I G C++ + E+A  LL E+ EK L P+  TY
Sbjct: 614 DKALKLFNTWI---SKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
             +   + + G + + E  M  I
Sbjct: 671 NAILSALADAGRMKEAEEFMSRI 693



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 212/406 (52%), Gaps = 23/406 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GFE   +    G+K + ++ N +++  VKEGK ++     ++M+      +  +FN ++N
Sbjct: 371 GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLIN 430

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CKAG+L++A  +M++M   G+    VT N ++   C +  +   YK   +     + G
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK---LLSSASKRG 487

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              +EV++ TLI G+ KD     AMK+++EM    I   ++TYN++I GLC  GK D+++
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
              +E++ SGL P+  T N +I G+C++  VEKA    + + ++   P + T N L+   
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C EG ++ A  + N+ + +G   D  TYN +I+GL +E   E   +++ E+    +    
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667

Query: 435 VTYNILVGALCKDGKSKKAVSLL----------DEMFKMEKEK----------KWPNIVT 474
            TYN ++ AL   G+ K+A   +          D+   + K K            PN VT
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVT 727

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           ++  I   C +GK +DA  ++ E  +KG+  +++TY  + E ++++
Sbjct: 728 FSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/350 (20%), Positives = 130/350 (37%), Gaps = 92/350 (26%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ + K G+ +    +   +S     L  NS+ ++ ++       K    ++    A 
Sbjct: 427 TLINGYCKAGRLSEAFRMMDEMS--RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G     +S   L+    K+GK  +   ++ EMK + I  ++ ++N ++ GLC +GK +
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---------------------- 241
           ++ D + ++   G+ P   TYN +I GYC++G + K +                      
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 242 ----------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA------------- 278
                     KA  +F   +  G   + VT+NT+I G CK++    A             
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 279 ------------------MKVFEEMGSHGIAAG--------------------------- 293
                             MK  EE  S  +  G                           
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            VT++  IN LC  GK  +A+ +  E    G+  +  T  +L+ G  K++
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRR 774


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 224/374 (59%), Gaps = 15/374 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  ++++ N ++  L K         +++E+  R    ++ ++N +++ LCKAG L +A
Sbjct: 32  GVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTFN 263
             +  DM S G  P VVTY++LI+G CK   +G++ +A  + ++M      +LPN +T+N
Sbjct: 92  RRLHGDMSSRGCVPNVVTYSVLINGLCK---VGRIDEARELIQEMTRKSCDVLPNIITYN 148

Query: 264 TLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + +DG CK    + A ++   +  GS  ++   VT+++LI+GLC  G++DEA ++ D+M+
Sbjct: 149 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A G  PNV+T NAL+NG CK   +E+A  + + + ++G++P VITY+ L+DA+CK  R++
Sbjct: 209 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 268

Query: 382 DAFAMRNSMLDRG-----VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +A  + + M  RG     ++PD  T+N LIAG  + GN E    +  E+V   ++  ++T
Sbjct: 269 EALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 328

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +  L+  LCK G+ + A  +LD M  +      PN+VTYN L+ G C+ G++E+A   L 
Sbjct: 329 FGALIDGLCKAGQVEAARDILDLMGNLGVP---PNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 497 ELLEKGLIPNQTTY 510
           E++  G +P+  TY
Sbjct: 386 EMVSSGCVPDSITY 399



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/414 (34%), Positives = 228/414 (55%), Gaps = 27/414 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G E F+   + G    V++ N L+ +L K G  E+   ++ +M  R    N+ +++ ++N
Sbjct: 56  GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN 115

Query: 195 GLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           GLCK G++++A +++++M  KS  V P ++TYN  +DG CK+    +  +     +D   
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             + P+ VTF+TLIDG CK   I  A  VF++M + G    V+TYN+L+NGLC   K++ 
Sbjct: 176 R-VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV-----ITY 367
           A A+ + M+  G+ P+V+T + L++ FCK   V++A  L   ++ +G +P+V     +T+
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI   CK G  E A A+   M+ + + PDV T+  LI GL + G VE  R+I++ + N
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   +VTYN LV  LCK G+ ++A   L+EM         P+ +TY  L+   C+  +
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV---SSGCVPDSITYGSLVYALCRASR 411

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            +DA  L++EL   G  P+  TY I                V EEM+ KG  PD
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 213/385 (55%), Gaps = 13/385 (3%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF--VLNGLCKAGKLNKASDI 208
           +++ N  L  L K+    +   + + ++   + ++ D+  F  +++GLCK G++++A  +
Sbjct: 144 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            +DM + G  P V+TYN L++G CK     KM +A A+ + MV+ G+ P+ +T++ L+D 
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKAD---KMERAHAMIESMVDKGVTPDVITYSVLVDA 260

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGV-----VTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           FCK   +  A+++   M S G    V     VT+N LI G C  G  ++A AL +EM+A 
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L+P+V+T  ALI+G CK   VE AR + D +   G+ P+V+TYN L+   CK GR+E+A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 380

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M+  G +PD  TY  L+  L R    +    +++EL + G     VTYNILV  
Sbjct: 381 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 440

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L K GK+++A+++L+EM     +   P+  T+     G  + G L     LL  +L KG+
Sbjct: 441 LWKSGKTEQAITVLEEMV---GKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGM 497

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEG 528
           +P+ TT   + + +   G + D++ 
Sbjct: 498 LPDATTCSSILDWVCRSGKLDDVKA 522



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 190/363 (52%), Gaps = 11/363 (3%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R G   +    ++ + L+  L K G+ ++   V+ +M       N+ ++N ++NGLCKA 
Sbjct: 171 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-----I 255
           K+ +A  ++E M   GV+P V+TY++L+D +CK     ++ +A  +   M   G     +
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA---SRVDEALELLHGMASRGCTPNVL 287

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P++VTFN LI G CK  N   A  +FEEM +  +   V+T+ +LI+GLC  G+++ A  
Sbjct: 288 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 347

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + D M   G+ PNVVT NAL++G CK   +E+A    +++   G  P  ITY +L+ A C
Sbjct: 348 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +  R +DA  + + +   G  PD  TYN L+ GL + G  E    ++ E+V  G +    
Sbjct: 408 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 467

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T+      L + G     + LL  +     +   P+  T + ++   C+ GKL+D   ++
Sbjct: 468 TFAACFSGLHRSGNLAGTMELLRVVL---AKGMLPDATTCSSILDWVCRSGKLDDVKAMI 524

Query: 496 NEL 498
            E 
Sbjct: 525 KEF 527



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 186/332 (56%), Gaps = 32/332 (9%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFK-DMVENGILPNEVTFNTLIDGFCKDENISAAM 279
           V  YNI++   C+ G   +  +   +F+ +M  +G+ P  VT+NT+I+G CK  ++ A M
Sbjct: 1   VADYNIVLQSLCRAGDTARALE---IFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGM 57

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           ++FEE+   G    VVTYN+LI+ LC  G L+EA  L  +M + G  PNVVT + LING 
Sbjct: 58  ELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117

Query: 340 CKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG--V 395
           CK   +++AR L  +++ +     P++ITYN+ +D  CK+    +A  +  S+ D    V
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 177

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PD  T++ LI GL + G ++   ++ ++++  G    ++TYN LV  LCK  K ++A +
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-----LIPNQTTY 510
           +++ M     +   P+++TY+VL+  FC+  ++++A  LL+ +  +G     L+P++ T+
Sbjct: 238 MIESMV---DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294

Query: 511 QI----------------VREEMMEKGFIPDI 526
            I                + EEM+ K   PD+
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDV 326



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 190/377 (50%), Gaps = 40/377 (10%)

Query: 97  SVSTIFHALSTCS--DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
           + ST+   L  C   D  C  S+  DM+   YV N                     V++ 
Sbjct: 183 TFSTLIDGLCKCGQIDEAC--SVFDDMIAGGYVPN---------------------VITY 219

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K  K E    + + M  + +  ++ +++ +++  CKA ++++A +++  M S
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279

Query: 215 LGVSPKV-----VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            G +P V     VT+NILI G CK G      +A A+F++MV   + P+ +TF  LIDG 
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAG---NFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   + AA  + + MG+ G+   VVTYN+L++GLC  G+++EA    +EM++SG  P+ 
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T  +L+   C+    + A  L  ++   G  P  +TYN L+D   K G+ E A  +   
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G  PD  T+    +GL R GN+ G   ++  ++  GM     T + ++  +C+ GK
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGK 516

Query: 450 SKKAVSLLDEMFKMEKE 466
                  LD++  M KE
Sbjct: 517 -------LDDVKAMIKE 526



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 37/228 (16%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G F   S +F  +   + +L  + +    L+    K  +     +     G+ G+  +
Sbjct: 303 KAGNFEQASALFEEMV--AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+  L K G+ E+     +EM       +  ++  ++  LC+A + + A  ++ 
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGG-----------IGKMYKADA-------------- 245
           ++KS G  P  VTYNIL+DG  K G            +GK ++ D+              
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 246 -------VFKDMVENGILPNEVTFNTLIDGFCKD---ENISAAMKVFE 283
                  + + ++  G+LP+  T ++++D  C+    +++ A +K FE
Sbjct: 481 NLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 278/530 (52%), Gaps = 30/530 (5%)

Query: 2   FCSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASH 61
            C + S++ D+  ++++  +S+L   D    I+ L  +      +L Y       +R+  
Sbjct: 129 LCYSTSSVFDL--VVKS--YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR 184

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII 118
           ++     +   ++ ++  P + ++   +  F   G      T+F  + T       N + 
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET--KGCLPNVVT 242

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            + L+  Y K  K   GF+  +     GL+ +++S N ++  L +EG+ ++V +V  EM 
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           RR   L+  ++N ++ G CK G  ++A  +  +M   G++P V+TY  LI   CK G   
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN-- 360

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            M +A      M   G+ PNE T+ TL+DGF +   ++ A +V  EM  +G +  VVTYN
Sbjct: 361 -MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LING CV GK+++A+A+ ++M   GL P+VV+ + +++GFC+   V++A  +  ++ E+
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P  ITY++LI  +C++ R ++A  +   ML  G+ PD  TY  LI     EG++E  
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV- 477
             + NE+V  G+   +VTY++L+  L K  ++++A  LL ++F    E+  P+ VTY+  
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF---YEESVPSDVTYHTL 596

Query: 478 --------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
                         LIKGFC KG + +A+ +   +L K   P+ T Y I+
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 260/551 (47%), Gaps = 60/551 (10%)

Query: 19  HHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK 78
           HH S   N  P      L  S  D  LIL++  W+        +L      LH L   K 
Sbjct: 40  HHLSA--NFTPEAASNLLLKSQNDQALILKFLNWANP--HQFFTLRCKCITLHILTKFKL 95

Query: 79  YPKIRSFLH-MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFE 137
           Y   +     +  K       S +F +L    D     S + D+++ +Y +         
Sbjct: 96  YKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALS 155

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
               A  +G    VLS N +L A ++  +     E V+KEM   ++  N+ ++N ++ G 
Sbjct: 156 IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C AG ++ A  + + M++ G  P VVTYN LIDGYCK   I                   
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+M +   V  +M   G   +EVT+NTLI G+CK+ N   A+ +  E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  HG+   V+TY SLI+ +C  G ++ A+   D+M   GL PN  T   L++GF +K  
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           + +A  +  ++++ G SPSV+TYN LI+ +C  G+MEDA A+   M ++G+ PDV +Y+ 
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +++G  R  +V+    +  E+V  G++   +TY+ L+   C+  ++K+A  L +EM ++ 
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
                P+  TY  LI  +C +G LE A  L NE                   M+EKG +P
Sbjct: 516 LP---PDEFTYTALINAYCMEGDLEKALQLHNE-------------------MVEKGVLP 553

Query: 525 DIEGHMYNISG 535
           D+  +   I+G
Sbjct: 554 DVVTYSVLING 564



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 53/356 (14%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    ++G   +   V +EM       ++ ++N ++NG C  GK+  A  ++EDMK  G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP VV+Y+ ++ G+C+   + +  +   V ++MVE GI P+ +T+++LI GFC+     
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALR---VKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  ++EEM   G+     TY +LIN  C++G L++A+ L +EM+  G+ P+VVT + LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 337 NG--------------------------------------------------FCKKKLVE 346
           NG                                                  FC K ++ 
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F+ +  +   P    YN +I  +C+ G +  A+ +   M+  G L    T   L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L +EG V  + +++  ++ +   +      +LV    ++G     + +L EM K
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 167/368 (45%), Gaps = 53/368 (14%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC N      L+  + +    +  +   +   D G   SV++ N L+      GK ED  
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V ++MK + +  ++ S++ VL+G C++  +++A  +  +M   G+ P  +TY+ LI G+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C++    +  +A  ++++M+  G+ P+E T+  LI+ +C + ++  A+++  EM   G+ 
Sbjct: 496 CEQR---RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 292 AGVVTYNSLINGL----------------------------------------------- 304
             VVTY+ LINGL                                               
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612

Query: 305 ---CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
              C+ G + EA  + + M+    KP+    N +I+G C+   + KA  L+ ++ + G  
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              +T   L+ A  KEG++ +  ++   +L    L +      L+    REGN++ V ++
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDV 732

Query: 422 MNELVNNG 429
           + E+  +G
Sbjct: 733 LAEMAKDG 740


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 241/466 (51%), Gaps = 57/466 (12%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  ++  + ML+  + +  +  LGF    +    GL+ ++++ N L+  L K GKF    
Sbjct: 153 LSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAV 212

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAG------------------------------- 200
            ++ +M  R  + ++ ++  ++NGLCK G                               
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL 272

Query: 201 ----KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
               ++N+A DI   MK+ G+SP + TYN LI G C      +  +A A+  +M+   I+
Sbjct: 273 CKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN---FSRWREASAMLNEMMSLNIM 329

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VTF+ LI+ FCK+ N+  A  V + M   G+   VVTY+SL+NG  +  ++ EA  L
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKL 389

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D M+  G KP+V + N LING+CK K + +A+ LF+++  QGL+P +++YNTLID  C+
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR+ +A  +  +ML  G LPD+ TY+ L+ G  ++G +     +   + +  ++  +V 
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YNIL+ A+CK    K+A  L  E+F    +   PN+  Y  +I G C++G L++A     
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELF---VQGLQPNVQIYTTIINGLCKEGLLDEALEAFR 566

Query: 497 ELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
            + E G  PN+ +Y ++                  EM EKGF+ D+
Sbjct: 567 NMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 212/377 (56%), Gaps = 7/377 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++  N+LL A+VK   + D V  + K+M+   +  +  + + ++N   +  +++   
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++  +  LG+   +VT+N LI+G CK   +GK  +A  +F DMV  G  P+  T+ T+I
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCK---VGKFGQAVELFDDMVARGYQPDVHTYTTII 234

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G CK     AA  +F +MG  G    VVTY+++I+ LC D +++EA+ +   M A G+ 
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS 294

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN+ T N+LI G C      +A  + +++    + P+++T++ LI+ +CKEG + +A  +
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             +M + GV P+V TY+ L+ G S +  V   R + + ++  G +  + +YNIL+   CK
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCK 414

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             +  +A  L +EM     +   P+IV+YN LI G CQ G+L +A+ L   +L  G +P+
Sbjct: 415 AKRIGEAKQLFNEMI---HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD 471

Query: 507 QTTYQIVREEMMEKGFI 523
             TY I+ +   ++G++
Sbjct: 472 LCTYSILLDGFCKQGYL 488



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 48/404 (11%)

Query: 74  VVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYV 127
           +VA+ Y P + ++   ++   K G+  + + +F  +  + C   +   S IID L     
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL----C 273

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ + +   + F      G+  ++ + N L++ L    ++ +   +  EM    I  N+ 
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY----------------------- 224
           +F+ ++N  CK G + +A  +++ M  +GV P VVTY                       
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 225 ------------NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
                       NILI+GYCK   IG+   A  +F +M+  G+ P+ V++NTLIDG C+ 
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGE---AKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A  +F+ M ++G    + TY+ L++G C  G L +A  L   M ++ LKPN+V  
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LI+  CK + +++AR LF ++  QGL P+V  Y T+I+  CKEG +++A     +M +
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G  P+  +YN +I G  +  +      ++ E+   G  A + T
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 4/257 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVT 331
            NI  A+  F  M        ++ +N L++ +  +    D  ++L  +M  +GL P+  T
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LIN F + + V+    +   I + GL  +++T+NTLI+  CK G+   A  + + M+
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG  PDV TY  +I GL + G       +  ++   G +  +VTY+ ++ +LCKD +  
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A   LD    M+ +   PNI TYN LI+G C   +  +A+ +LNE++   ++PN  T+ 
Sbjct: 280 EA---LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336

Query: 512 IVREEMMEKGFIPDIEG 528
           ++     ++G + +  G
Sbjct: 337 LLINIFCKEGNVFEARG 353



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 32/219 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  V S N L+    K  +  + + ++ EM  + +  ++ S+N +++GLC+ G+L +A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----------------------- 242
            D+ ++M + G  P + TY+IL+DG+CK+G + K ++                       
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516

Query: 243 ---------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                    A  +F ++   G+ PN   + T+I+G CK+  +  A++ F  M   G    
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +YN +I G         AV L  EM   G   +V T+
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATT 615


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/390 (34%), Positives = 218/390 (55%), Gaps = 6/390 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++    G+  S ++   L+  L     F+D   ++ +M RR    +  ++N +++  CK
Sbjct: 33  FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCK 92

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L +A D+++ M   G  P VVTYN ++DG CK G   ++ +A  +F +M   G  PN
Sbjct: 93  RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG---RVEEALLLFNEMERLGCTPN 149

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             + NT+I G C+   I  A +VF EM +  I     +Y  LI+GL   GKL+EA  L  
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG+ P+ VT N +I+G C    +++A  LF  +  +G  PS  T+N LIDA+CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +M++AF +   M D G +PDV TY+ LI+GL     V+  R+++ ++V    +  +VT N
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK G+ K+A  +LD M       + P++VTYN L+ G C+ G+ E A  LL+++
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMV---SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           + +GL PN  TY  +   + +   +P+  G
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACG 416



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 234/456 (51%), Gaps = 13/456 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLA 125
           +LLHS V         S +H       F     +F  ++   C  S    ++IID    A
Sbjct: 35  KLLHSGVTPSTV-AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIID----A 89

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K        +  K+  + G    V++ N ++  L K G+ E+   ++ EM+R     N
Sbjct: 90  SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             S N ++ GLC+  K+++A  +  +M++  + P   +Y ILIDG  K G + + YK   
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYK--- 206

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F+ M+++GI P+ VT+N +I G C    +  A+++F+ M S G      T+N LI+  C
Sbjct: 207 LFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC 266

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             GK+DEA  L   M   G  P+VVT + LI+G C    V+ AR L +D+ ++   P+V+
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T NTLI   CK GR+++A  + ++M+  G  PDV TYN L+ G  R G  E  R +++++
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G+   +VTY  LV  LCK  +  +A  +  +M   +     PN+ TY  LI GFC  
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM---KSSGCAPNLFTYTALILGFCSA 443

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G+++    L  E++  G+ P+   Y  +  E+ + G
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 193/349 (55%), Gaps = 4/349 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K GK  +   +++ M    I  +  ++N V++G+C A  L++A ++ + M+S G
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P   T+NILID +CK+G   KM +A  + K M ++G +P+ VT++TLI G C    + 
Sbjct: 251 CRPSRFTFNILIDAHCKRG---KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  + E+M        VVT N+LI+GLC  G++ EA  + D M++SG  P+VVT N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G C+    E+AR L  D+  +GL+P+V+TY  L+   CK  R+ +A  +   M   G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TY  LI G    G V+G   +  E+V  G+    V Y  L   LCK G+S +A+ +
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           L E  +  + + W + V Y   + G    GK+E A G + +++  G +P
Sbjct: 488 LREGRESLRSEAWGDEV-YRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 212/439 (48%), Gaps = 15/439 (3%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             +  K      +FH +   +  +  +S    +L+    K  K +  ++ F+R  D G+ 
Sbjct: 160 LCQQSKIDQACQVFHEME--ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGIT 217

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            S ++ N ++  +      ++   ++K M+ +    +  +FN +++  CK GK+++A  +
Sbjct: 218 PSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRL 277

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           ++ M   G  P VVTY+ LI G C    I ++  A  + +DMV+    P  VT NTLI G
Sbjct: 278 LKRMTDDGHVPDVVTYSTLISGLCS---IARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK   I  A +V + M S G +  VVTYN+L++G C  G+ + A  L  +M+A GL PN
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VVT  AL++G CK   + +A  +F  +   G +P++ TY  LI  +C  G+++    +  
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA---GLVTYNILVGALC 445
            M+  G+ PD   Y  L A L + G       I+ E     +R+   G   Y   V  L 
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLL 513

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE--KGL 503
             GK + A+  + +M    +  + P       L+ G C+ G+  +A  +L E+++   G 
Sbjct: 514 DAGKMEMALGFVRDMV---RGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGG 570

Query: 504 IPNQTTYQIVREEMMEKGF 522
                  + V EEM+ KG+
Sbjct: 571 KARGKAAKFV-EEMVGKGY 588



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 168/303 (55%), Gaps = 8/303 (2%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    VSP   +Y ILIDG  K G   K+  A  +F+ ++ +G+ P+ V + +LI G C 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAG---KLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             +   A ++F +M   G     VTYN +I+  C  G L+EA  L  +M+  G  P+VVT
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +++G CK   VE+A +LF+++   G +P+  ++NT+I   C++ +++ A  + + M 
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R + PD  +Y  LI GL++ G +     +   ++++G+    VTYN+++  +C      
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 452 KAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A+    E+FK  + K   P+  T+N+LI   C++GK+++A  LL  + + G +P+  TY
Sbjct: 238 EAL----ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 511 QIV 513
             +
Sbjct: 294 STL 296


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/505 (33%), Positives = 251/505 (49%), Gaps = 43/505 (8%)

Query: 45   LILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
            L L++  W  K+  L   H   +     H LV A+ Y   +S L    + G      +IF
Sbjct: 843  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG--IGSKSIF 900

Query: 103  HALSTCSDSLCRNSI--IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
             AL   +  LC NSI  + D+L+  Y+K        E F+  G  G K SV +CN +L +
Sbjct: 901  GALMD-TYPLC-NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 958

Query: 161  LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
            +VK+ + E V  +++EM  + I  N+ +FN ++NGLC  G L KA ++++ M+  G  P 
Sbjct: 959  MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 1018

Query: 221  VVTYNILIDGYCKKG---------------GI-----------------GKMYKADAVFK 248
            +VTYN L++ YCKKG               GI                  +  KA  + K
Sbjct: 1019 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 1078

Query: 249  DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
             M +  I PNEVT+NTLI+GF K+  I  A +VF EM    ++   VTYN+LI G C  G
Sbjct: 1079 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 1138

Query: 309  KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
              +EA+ L D M A+GL+ N VT   L+NG CK +  E A+ L + +    +    I Y 
Sbjct: 1139 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 1198

Query: 369  TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
             LID  CK G +++A  +  +M   GV PDV TY+ LI G  R GN++  + I+  +  +
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 1258

Query: 429  GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            G+    + Y+ L+   C+ G   +A+ +      M       +  T NVL+   C+ GKL
Sbjct: 1259 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYA---VMNCNGHGADHFTCNVLVSSLCRDGKL 1315

Query: 489  EDANGLLNELLEKGLIPNQTTYQIV 513
             +A   L  +   GL+PN  TY  +
Sbjct: 1316 GEAEKFLCHMSRIGLVPNSITYDCI 1340



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 6/353 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            G+++ V + N  +  L    +      + K+M++  I  N  ++N ++NG  K GK+  A
Sbjct: 1049 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 1108

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + +  +M    +SP  VTYN LI G+C    +G   +A  +   M   G+  NEVT+ TL
Sbjct: 1109 AQVFNEMSKFDLSPNCVTYNALIGGHCH---VGDFEEALRLLDHMEAAGLRLNEVTYGTL 1165

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            ++G CK E    A ++ E M  + +  G + Y  LI+GLC +G LDEAV L   M   G+
Sbjct: 1166 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 1225

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             P+V+T ++LINGFC+   ++ A+ +   +   GL  + I Y+TLI  +C+ G + +A  
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +   M   G   D  T N L++ L R+G +      +  +   G+    +TY+ ++    
Sbjct: 1286 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 1345

Query: 446  KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
              G    A S  D+M K  +    P+  TY  L+KG C+ G L +A   LN L
Sbjct: 1346 SIGDPLNAFSFFDDMIKCGQH---PSFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 204/450 (45%), Gaps = 39/450 (8%)

Query: 112  LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
            L  N II   L+  + ++       + +      G  +   +CN L+ +L ++GK  + E
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 172  YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
                 M R  +  N  +++ ++NG    G    A    +DM   G  P   TY  L+ G 
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 232  CKKGGI--------------------------------GKMYKADAVFKDMVENGILPNE 259
            CK G +                                G +++A A+F  MV+N +LP+ 
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439

Query: 260  VTFNTLIDGFCKDENISAAMKVF-EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+++L+ G C+      A+ +F   MG   +    V Y  L++GL   G    A    +
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499

Query: 319  EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            EMM  G  P+ V  NA+I+   ++  + KA   F  +   G+ P++ TYN L+  + K+ 
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559

Query: 379  RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             +    ++ ++M+  G+ PD  T++ LI GLS+ G  +    ++ +++  G  A   T+N
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 1619

Query: 439  ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            IL+    + GK +KA  L++ M  +     +P+  TYN +  G  +K    ++  +L+E+
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTL---GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676

Query: 499  LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            LE G+IP    Y  +   M   G   DI+G
Sbjct: 1677 LENGVIPKHAQYITLINGMCRVG---DIQG 1703



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 157  LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
            L+  L K G  +   Y ++EM ++    +  +FN +++   + G++ KA+D    M+  G
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540

Query: 217  VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            V P + TYNIL+ G+ KK  + +     +++  M+  GI P+++TF++LI G  K     
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYL---SLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597

Query: 277  AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              +K+  +M   G  A   T+N LIN     GK+ +A  L + M   G+ P+  T N + 
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657

Query: 337  NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            NG  KK    ++ V+  ++ E G+ P    Y TLI+  C+ G ++ AF +++ M   G  
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717

Query: 397  PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
                  + ++ GL   G  E    +++ ++   +   + T+  L+   C+D K  +A+ L
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777

Query: 457  LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
                  ME      ++V YNVLI G C  G    A  L  E+  + L PN TTY ++
Sbjct: 1778 KG---VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1831



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 13/350 (3%)

Query: 187  DSFNFVLNGLCKAGKLNKA--SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            DS   +L  LC+ G  +K+    +M+        P V  +++LI  Y K+G I     A 
Sbjct: 880  DSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDY---AV 934

Query: 245  AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              F+ +   G  P+  T N ++    KD+       +F EM   GI   V T+N LINGL
Sbjct: 935  ETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL 994

Query: 305  CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            CV+G L +A  L  +M  +G  P +VT N L+N +CKK   + A  L D +  +G+   V
Sbjct: 995  CVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADV 1054

Query: 365  ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             TYN  ID  C   R   A+ +   M    + P+  TYN LI G  +EG +     + NE
Sbjct: 1055 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 1114

Query: 425  LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            +    +    VTYN L+G  C  G  ++A+ LLD    ME      N VTY  L+ G C+
Sbjct: 1115 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH---MEAAGLRLNEVTYGTLLNGLCK 1171

Query: 485  KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD---IEGHMY 531
              K E A  LL  +    ++     Y ++ + + + G + +   + G+MY
Sbjct: 1172 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 1221



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 3/243 (1%)

Query: 188  SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +FN ++N   ++GK+ KA D++  M +LGV P   TYN + +G  KK       ++  V 
Sbjct: 1617 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF---RESTVVL 1673

Query: 248  KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             +M+ENG++P    + TLI+G C+  +I  A K+ +EM + G  +  V  ++++ GL   
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733

Query: 308  GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            GK ++A+ + D M+   L P + T   L++ FC+   + +A  L   +   GL   V+ Y
Sbjct: 1734 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1793

Query: 368  NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            N LI   C  G    AF +   M  R + P+++TY  L+  +S   N+     ++ +L  
Sbjct: 1794 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853

Query: 428  NGM 430
             G+
Sbjct: 1854 RGL 1856



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 8/338 (2%)

Query: 107  TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            TC D++  N+II         + MK +  F   +    +G+  ++ + N LL    K+  
Sbjct: 1506 TCPDTVAFNAIIDSCSRRG--QMMKANDFFSTMRW---WGVCPNLATYNILLHGFSKKQA 1560

Query: 167  FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                  +Y  M R  I  +  +F+ ++ GL K+G  +    ++  M   G      T+NI
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 1620

Query: 227  LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            LI+ Y + G   KM KA  +   M   G+ P+  T+N + +G  K      +  V  EM 
Sbjct: 1621 LINKYSESG---KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 287  SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             +G+      Y +LING+C  G +  A  L+DEM A G   + V  +A++ G       E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 347  KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
             A ++ D +    L P++ T+ TL+  +C++ ++ +A  ++  M   G+  DV  YN LI
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797

Query: 407  AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             G+   G+      +  E+ +  +   + TY +LV A+
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 203/375 (54%), Gaps = 25/375 (6%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R++  ++ ++N +++GLCKA K +KAS+++ +M   GV+P  VT+N ++DG CK G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG- 59

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             K  +A ++   M E    P+  T+NTLI G CK +N+  A  + +E  S G    VVT
Sbjct: 60  --KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y+ L +GLC  G++DEA  L  EM  +G  PN+VT N LI+G CK    EKA  L + + 
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             G  P V+TY  ++D  CKEGR++ A  M   ML RG  P V TY  L+ GL R G V+
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              +I  E+V+    A  + Y  LV   CK  ++K+A  ++D +      +  P I  YN
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI------RGTPYIDVYN 291

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEK 520
            L+ G+C++G+L++   +  ++  +G +PN  TY IV                 E M   
Sbjct: 292 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 351

Query: 521 GFIPDIEGHMYNISG 535
           G +PD+  +   I G
Sbjct: 352 GCVPDVVSYNIIIDG 366



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 222/427 (51%), Gaps = 42/427 (9%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           +I+ID L     K  K     E      D G+    ++ N ++  L K GKFE    +  
Sbjct: 14  NILIDGL----CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 69

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            M  R    +  ++N +++GLCK   +++A  ++++  S G  P VVTY+IL DG CK+G
Sbjct: 70  VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRG 129

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            I + ++   + K+M  NG  PN VT+NTLIDG CK      A ++ E + S G    VV
Sbjct: 130 RIDEAFE---LVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY  +++GLC +G+LD+A+ + + M+  G  P+V+T  AL+ G C+   V++A  +F ++
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 356 SEQGL--------------------------------SPSVITYNTLIDAYCKEGRMEDA 383
             +                                  +P +  YN L+D YCKEGR+++ 
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  RG +P++ TYN ++ GL + G V+     +  + + G    +V+YNI++  
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L K  K K+A  +LD+M    +    P+ VTYN L+  FC++ + +DA G+L  +++ G+
Sbjct: 367 LFKASKPKEARQVLDQMI---QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423

Query: 504 IPNQTTY 510
            P+  TY
Sbjct: 424 DPDNVTY 430



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 254/486 (52%), Gaps = 28/486 (5%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTI 101
           +++   C ++K  +AS        +LH +V     P   +F   +    K GKF    ++
Sbjct: 15  ILIDGLCKASKTDKASE-------MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 102 FHALS--TCSDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
              ++   C  S C  N++I  +     V   K  +  + F  +G       V++ + L 
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLV--DEFVSSG---FVPDVVTYSILA 122

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
             L K G+ ++   + KEM       NL ++N +++GLCKA K  KA +++E + S G  
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P VVTY I++DG CK+G + K  K   + + M++ G  P+ +T+  L++G C+   +  A
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALK---MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
             +F+EM S    A  + Y SL+NG C   +  EA  + D +  +   P +   NAL++G
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDG 296

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           +CK+  +++   +F+D++ +G  P++ TYN ++D  CK G++++AF    SM   G +PD
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V +YN +I GL +    +  R ++++++  G+    VTYN L+   CK+ +   AV +L 
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ-TTYQIVREEM 517
            M K   +   P+ VTYN LI G  Q  +L DA  L++E+L  G + +  TTY  + + +
Sbjct: 417 NMIKAGVD---PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 473

Query: 518 MEKGFI 523
            ++G +
Sbjct: 474 CKEGCL 479



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 206/361 (57%), Gaps = 11/361 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    KEG+ +++  V+++M  R    N+ ++N V++GLCK GK+++A   +E M S
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P VV+YNI+IDG  K     K  +A  V   M++ GI P+ VT+NTL+  FCK+E 
Sbjct: 351 AGCVPDVVSYNIIIDGLFKAS---KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS-N 333
              A+ + + M   G+    VTYN+LI+GL    +L +A  L  EM+ +G   +  T+ N
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I+  CK+  +++A +L D ++  G+  + +TYN  ID  CKEGR+++A ++ + M   
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--- 524

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILVGALCKDGKSKK 452
             L D  +Y  +I GL +   ++    +  E+V   G+     T+N+L+ A  K  +  +
Sbjct: 525 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A++LL+ M +       P+++TYN++I   C+  K++ A  L +E+  +G++ +  +Y +
Sbjct: 585 ALTLLELMVQ---RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 641

Query: 513 V 513
           +
Sbjct: 642 L 642



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 42/236 (17%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           F+    K G+    S++   + T  D +   ++II +               E   RA  
Sbjct: 504 FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKA------------EQLDRA-- 549

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
                     ++L R +V                 + + +   +FN +++   K  +L++
Sbjct: 550 ----------SKLAREMV---------------AVKGLCITSHTFNLLIDAFTKTKRLDE 584

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++E M   G SP V+TYN++I   CK   + K+ KA  +F +M   GI+ + V++  
Sbjct: 585 ALTLLELMVQRGCSPSVITYNMVITCLCK---LDKVDKAWELFDEMAVRGIVASSVSYTV 641

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           LI G C       A++V EEM S       +    L   L   G+ +EA  L   M
Sbjct: 642 LIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 233/454 (51%), Gaps = 7/454 (1%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L   + + + +S +   V      S +++F A+   + + C N  + D LM+AY  +   
Sbjct: 111 LSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSN-FVFDALMIAYWDSGFV 169

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
               + F+   +   +     C  LL  ++       +   Y E+        +  +N +
Sbjct: 170 SDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNIL 229

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +N  CK G +  A  I  +++  G+ P  V++N LI+G CK   + + ++     K M E
Sbjct: 230 INKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK---KTMEE 286

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N I P+  T++ LI G CK+  +  A ++F+EM   G+    +T+ +LI+G C   ++D 
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+    +M+  G+KP++V  N L+NG CK   V KAR L D++   G+ P  ITY TLID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLID 406

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCKEG +E A  +R  M + GV+ D   +  LI+G  R+G V      + E+V  GM+ 
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY +++   CK G  K    LL EM ++   K  P ++TYNVL+ G C++G++++AN
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHK--PGVITYNVLMNGLCKQGQMKNAN 523

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            LL  +L  G+ P+  TY I+ E   + G   D+
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDL 557



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 201/376 (53%), Gaps = 11/376 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           PK++ +   ++ F K G       IF+ +      L   ++  + L+    K+     GF
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIR--KRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
              K   +  +   V + + L+  L KEG+ +  E ++ EM++R +  N  +F  +++G 
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C++ +++ A +    M ++GV P +V YN L++G CK   +G + KA  +  +M   G+ 
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK---VGDVNKARKLVDEMRMVGMK 395

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+++T+ TLIDG+CK+ ++ +AM++ + M   G+    V + +LI+G C DG++ +A   
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+ +G+KP+  T   +I+G+CKK  V+    L  ++   G  P VITYN L++  CK
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G+M++A  +  +ML+ GV PD  TYN L+ G  + G  E +  + NE    G+      
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAY 572

Query: 437 YNILVGALCKDGKSKK 452
           Y  LV    K  K ++
Sbjct: 573 YTSLVSEYNKSLKDRQ 588


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 220/378 (58%), Gaps = 10/378 (2%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFV 192
           EA    GD    G   + ++ N L+ A  + G+ +  E V   M+     + NL +FN +
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM 229

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NGLCKAG++  A  + ++M   G++P VV+YN L+ GYCK   +G ++++ AVF +M +
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK---VGCLHESLAVFSEMTQ 286

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++P+ VTF +LI   CK  N+  A+ +  +M   G+    VT+ +LI+G C  G LD+
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+   +EM   G++P+VV  NALING+CK   ++ AR L  ++  + + P V+TY+T+I 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G ++ AF +   ML +GVLPD  TY+ LI GL  E  +     +   ++  G++ 
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY  L+   CK+G  +KA+SL DEM    ++   P++VTY+VLI G  +  + ++A+
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMI---RKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 493 GLLNELLEKGLIPNQTTY 510
            LL +L  +  +P+   Y
Sbjct: 524 RLLFKLYHEDPVPDNIKY 541



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 222/428 (51%), Gaps = 37/428 (8%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            D L+ +Y    +P L   A   A   G   SV + N +L AL  +            M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
           R  +  N+ ++N ++  LC  G+L +A  ++ DM+  G +P  VTYN L+  +C+ G + 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 238 --------------------------------GKMYKADAVFKDMVENGILPNEVTFNTL 265
                                           G+M  A  VF +MV  G+ P+ V++NTL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+CK   +  ++ VF EM   G+   VVT+ SLI+  C  G L++AVAL  +M   GL
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N VT  ALI+GFCKK  ++ A +  +++ + G+ PSV+ YN LI+ YCK GRM+ A  
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + V PDV TY+ +I+G  + GN++    +  +++  G+    +TY+ L+  LC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++ +   A  L + M ++  +   P+  TY  LI G C++G +E A  L +E++ KG++P
Sbjct: 445 EEKRLNDACELFENMLQLGVQ---PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 506 NQTTYQIV 513
           +  TY ++
Sbjct: 502 DVVTYSVL 509



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 30/441 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++   K G+      +F  +    + L  + +  + L+  Y K    H     F    
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEM--VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL   V++   L+ A  K G  E    +  +M+ R + +N  +F  +++G CK G L+
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A   +E+M+  G+ P VV YN LI+GYCK   +G+M  A  + ++M    + P+ VT++
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCK---LGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I G+CK  N+ +A ++ ++M   G+    +TY+SLI GLC + +L++A  L + M+  
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P+  T   LI+G CK+  VEKA  L D++  +G+ P V+TY+ LI+   K  R ++A
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +     +PD   Y+ L+   S                    +A   +   L+  
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCS--------------------KAEFKSVVALLKG 562

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            C  G  K+A    D++++   ++ W  +   Y++LI G C+ G +  A     ++L  G
Sbjct: 563 FCMKGLMKEA----DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN T+   +   + E+G +
Sbjct: 619 FSPNSTSTISLVRGLFEEGMV 639



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 162/324 (50%), Gaps = 56/324 (17%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  P+   +N ++     D ++ +A +    M  HG+A  V TYN L+  LC  G+L+EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 314 VALRDEMMASGL------------------------------------KPNVVTSNALIN 337
           V +  +M  +G                                     KPN+VT N+++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK   +E AR +FD++  +GL+P V++YNTL+  YCK G + ++ A+ + M  RG++P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV T+  LI    + GN+E    ++ ++   G+R   VT+  L+   CK G    A+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---- 513
           +EM K   +   P++V YN LI G+C+ G+++ A  L+ E+  K + P+  TY  +    
Sbjct: 352 EEMRKCGIQ---PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 514 ------------REEMMEKGFIPD 525
                        ++M++KG +PD
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPD 432



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 53/318 (16%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ SV+  N L+    K G+ +    + +EM+ +R++ ++ +++ +++G CK G L+ A
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   GV P  +TY+ LI G C++    ++  A  +F++M++ G+ P+E T+ TL
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGLCEEK---RLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL--------------------- 304
           IDG CK+ N+  A+ + +EM   G+   VVTY+ LINGL                     
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 305 -----------------------------CVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
                                        C+ G + EA  +   M+    K +    + L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G C+   V KA      +   G SP+  +  +L+    +EG + +A      +L    
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 396 LPDVSTYNCLIAGLSREG 413
           L D      LI    +EG
Sbjct: 655 LADAEASKALIDLNRKEG 672



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 21/186 (11%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           ++ LI +Y    R   A A        G  P V  YN ++  LS + ++   R  ++ ++
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALS-DASLPSARRFLSSML 144

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G+   + TYNILV ALC  G+ ++AV ++ +   M      PN VTYN L+  FC+ G
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGD---MRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 487 KLEDANGLLNELLEKG-LIPNQTTY----------------QIVREEMMEKGFIPDIEGH 529
           +L+ A  +++ + E+G   PN  T+                + V +EM+ +G  PD+  +
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 530 MYNISG 535
              +SG
Sbjct: 262 NTLLSG 267



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 62/294 (21%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ + L+R L +E +  D   +++ M +  ++ +  ++  +++G CK G + KA
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGY---------------------------------- 231
             + ++M   GV P VVTY++LI+G                                   
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547

Query: 232 CKKGGI-------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           C K                G M +AD V++ M++     +   ++ LI G C+  N+  A
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +   ++M   G +    +  SL+ GL  +G + EA     +++      +   S ALI+ 
Sbjct: 608 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDL 667

Query: 339 FCKKKLVEKARVLFDDISEQG------LSPSVITYNTLIDAYCKEGRMEDAFAM 386
             K+ +        D    QG       SPSV  +N ++   C  G     F+M
Sbjct: 668 NRKEGM--------DYFQAQGEIWYSESSPSVEYWNYMM-TICHFGVWSTYFSM 712


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 275/546 (50%), Gaps = 43/546 (7%)

Query: 8   TIEDITELIRNHHWSKLKNTDPNTVIL----QLFNSDADPVLI------LRYFCWSTKEL 57
           T E I++ + +  W  ++   PN         L+N  + P L+      L   C  TK  
Sbjct: 48  TEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSY 107

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNS 116
               +++L  RL          PK+   L   V   +  +   +F  L+   D L  ++S
Sbjct: 108 --CLAVVLLARL--------PSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSS 157

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I+ D+L+    +  +    F+ F    + G+   + +CN +L   +K  + E    +Y E
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R RI   + +FN ++N LCK GKL KA + +  M+ LG  P VV+YN +I GY  +G 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I     A  +   M   GI P+  T+ +LI G CK+  +  A  +F++M   G+    VT
Sbjct: 278 IE---GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 334

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+LI+G C  G L+ A + RDEM+  G+ P+V T N L++    +  + +A  +  ++ 
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G+ P  ITYN LI+ Y + G  + AF + N ML +G+ P   TY  LI  LSR   ++
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++  ++++ G+   ++ +N +V   C +G  ++A  LL E   M+++   P+ VT+N
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE---MDRKSVPPDEVTFN 511

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEK 520
            L++G C++GK+E+A  LL+E+  +G+ P+  +Y                  VR+EM+  
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571

Query: 521 GFIPDI 526
           GF P +
Sbjct: 572 GFNPTL 577



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 196/368 (53%), Gaps = 35/368 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V+S N ++      G  E    +   M+ + IE +  ++  +++G+CK G+L +A
Sbjct: 257 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 316

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
           S + + M  +G+ P  VTYN LIDGYC KG +                            
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+M +AD + K+M + GI+P+ +T+N LI+G+ +  N   A  +  EM S GI   
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            VTY SLI  L    ++ EA  L ++++  G+ P+V+  NA+++G C    VE+A +L  
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++  + + P  +T+NTL+   C+EG++E+A  + + M  RG+ PD  +YN LI+G  R G
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + +E+++ G    L+TYN L+  LCK+ +   A  LL EM     +   P+  
Sbjct: 557 DIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV---NKGISPDDS 613

Query: 474 TYNVLIKG 481
           TY  LI+G
Sbjct: 614 TYLSLIEG 621



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 19/259 (7%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           + ++ L+   C   + DEA      M   G+ P + T N +++ F K   +E A VL+ +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +    +S +V T+N +++  CKEG+++ A      M   G  P+V +YN +I G S  GN
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +EG R I++ +   G+     TY  L+  +CK+G+ ++A  L D+M ++      PN VT
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI---GLVPNAVT 334

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMM 518
           YN LI G+C KG LE A    +E+++KG++P+ +TY ++                 +EM 
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394

Query: 519 EKGFIPDIEGHMYNISGTS 537
           +KG IPD   +   I+G S
Sbjct: 395 KKGIIPDAITYNILINGYS 413



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 7/154 (4%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I+ + ++  +  N      F   K      +    ++ N L++   +EGK E+   +  E
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK--K 234
           MKRR I+ +  S+N +++G  + G +  A  + ++M S+G +P ++TYN LI   CK  +
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           G +     A+ + K+MV  GI P++ T+ +LI+G
Sbjct: 593 GDL-----AEELLKEMVNKGISPDDSTYLSLIEG 621


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 168/505 (33%), Positives = 251/505 (49%), Gaps = 43/505 (8%)

Query: 45  LILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           L L++  W  K+  L   H   +     H LV A+ Y   +S L    + G      +IF
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG--IGSKSIF 149

Query: 103 HALSTCSDSLCRNSI--IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
            AL   +  LC NSI  + D+L+  Y+K        E F+  G  G K SV +CN +L +
Sbjct: 150 GALMD-TYPLC-NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           +VK+ + E V  +++EM  + I  N+ +FN ++NGLC  G L KA ++++ M+  G  P 
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 267

Query: 221 VVTYNILIDGYCKKG---------------GI-----------------GKMYKADAVFK 248
           +VTYN L++ YCKKG               GI                  +  KA  + K
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M +  I PNEVT+NTLI+GF K+  I  A +VF EM    ++   VTYN+LI G C  G
Sbjct: 328 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +EA+ L D M A+GL+ N VT   L+NG CK +  E A+ L + +    +    I Y 
Sbjct: 388 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 447

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LID  CK G +++A  +  +M   GV PDV TY+ LI G  R GN++  + I+  +  +
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 507

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    + Y+ L+   C+ G   +A+ +      M       +  T NVL+   C+ GKL
Sbjct: 508 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYA---VMNCNGHGADHFTCNVLVSSLCRDGKL 564

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV 513
            +A   L  +   GL+PN  TY  +
Sbjct: 565 GEAEKFLCHMSRIGLVPNSITYDCI 589



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 6/353 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+++ V + N  +  L    +      + K+M++  I  N  ++N ++NG  K GK+  A
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 357

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +  +M    +SP  VTYN LI G+C    +G   +A  +   M   G+  NEVT+ TL
Sbjct: 358 AQVFNEMSKFDLSPNCVTYNALIGGHCH---VGDFEEALRLLDHMEAAGLRLNEVTYGTL 414

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G CK E    A ++ E M  + +  G + Y  LI+GLC +G LDEAV L   M   G+
Sbjct: 415 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 474

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V+T ++LINGFC+   ++ A+ +   +   GL  + I Y+TLI  +C+ G + +A  
Sbjct: 475 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G   D  T N L++ L R+G +      +  +   G+    +TY+ ++    
Sbjct: 535 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 594

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             G    A S  D+M K  +    P+  TY  L+KG C+ G L +A   LN L
Sbjct: 595 SIGDPLNAFSFFDDMIKCGQH---PSFFTYGSLLKGLCKGGNLVEAKKFLNRL 644



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 213/478 (44%), Gaps = 41/478 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++ F + G   S   I   +      L  N II   L+  + ++       + +    
Sbjct: 483 SLINGFCRVGNIKSAKEIICRMY--RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMN 540

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G  +   +CN L+ +L ++GK  + E     M R  +  N  +++ ++NG    G   
Sbjct: 541 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 600

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------- 237
            A    +DM   G  P   TY  L+ G CK G +                          
Sbjct: 601 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 660

Query: 238 ------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF-EEMGSHGI 290
                 G +++A A+F  MV+N +LP+  T+++L+ G C+      A+ +F   MG   +
Sbjct: 661 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 720

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               V Y  L++GL   G    A    +EMM  G  P+ V  NA+I+   ++  + KA  
Sbjct: 721 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 780

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            F  +   G+ P++ TYN L+  + K+  +    ++ ++M+  G+ PD  T++ LI GLS
Sbjct: 781 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G  +    ++ +++  G  A   T+NIL+    + GK +KA  L++ M  +     +P
Sbjct: 841 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL---GVFP 897

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           +  TYN +  G  +K    ++  +L+E+LE G+IP    Y  +   M   G   DI+G
Sbjct: 898 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG---DIQG 952



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 157  LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
            L+  L K G  +   Y ++EM ++    +  +FN +++   + G++ KA+D    M+  G
Sbjct: 730  LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789

Query: 217  VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            V P + TYNIL+ G+ KK     + +  +++  M+  GI P+++TF++LI G  K     
Sbjct: 790  VCPNLATYNILLHGFSKKQA---LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846

Query: 277  AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              +K+  +M   G  A   T+N LIN     GK+ +A  L + M   G+ P+  T N + 
Sbjct: 847  LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906

Query: 337  NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            NG  KK    ++ V+  ++ E G+ P    Y TLI+  C+ G ++ AF +++ M   G  
Sbjct: 907  NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966

Query: 397  PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
                  + ++ GL   G  E    +++ ++   +   + T+  L+   C+D K  +A+ L
Sbjct: 967  SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026

Query: 457  LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
                  ME      ++V YNVLI G C  G    A  L  E+  + L PN TTY ++
Sbjct: 1027 KG---VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1080



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 13/350 (3%)

Query: 187 DSFNFVLNGLCKAGKLNKA--SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           DS   +L  LC+ G  +K+    +M+        P V  +++LI  Y K+G I     A 
Sbjct: 129 DSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDY---AV 183

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             F+ +   G  P+  T N ++    KD+       +F EM   GI   V T+N LINGL
Sbjct: 184 ETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL 243

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           CV+G L +A  L  +M  +G  P +VT N L+N +CKK   + A  L D +  +G+   V
Sbjct: 244 CVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADV 303

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYN  ID  C   R   A+ +   M    + P+  TYN LI G  +EG +     + NE
Sbjct: 304 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 363

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +    VTYN L+G  C  G  ++A+ LLD    ME      N VTY  L+ G C+
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH---MEAAGLRLNEVTYGTLLNGLCK 420

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD---IEGHMY 531
             K E A  LL  +    ++     Y ++ + + + G + +   + G+MY
Sbjct: 421 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 470



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 3/243 (1%)

Query: 188  SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +FN ++N   ++GK+ KA D++  M +LGV P   TYN + +G  KK       ++  V 
Sbjct: 866  TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF---RESTVVL 922

Query: 248  KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             +M+ENG++P    + TLI+G C+  +I  A K+ +EM + G  +  V  ++++ GL   
Sbjct: 923  HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982

Query: 308  GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            GK ++A+ + D M+   L P + T   L++ FC+   + +A  L   +   GL   V+ Y
Sbjct: 983  GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1042

Query: 368  NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            N LI   C  G    AF +   M  R + P+++TY  L+  +S   N+     ++ +L  
Sbjct: 1043 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102

Query: 428  NGM 430
             G+
Sbjct: 1103 RGL 1105



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 8/338 (2%)

Query: 107  TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            TC D++  N+II         + MK +  F   +    +G+  ++ + N LL    K+  
Sbjct: 755  TCPDTVAFNAIIDSCSRRG--QMMKANDFFSTMRW---WGVCPNLATYNILLHGFSKKQA 809

Query: 167  FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                  +Y  M R  I  +  +F+ ++ GL K+G  +    ++  M   G      T+NI
Sbjct: 810  LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 869

Query: 227  LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            LI+ Y + G   KM KA  +   M   G+ P+  T+N + +G  K      +  V  EM 
Sbjct: 870  LINKYSESG---KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 287  SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             +G+      Y +LING+C  G +  A  L+DEM A G   + V  +A++ G       E
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 347  KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
             A ++ D +    L P++ T+ TL+  +C++ ++ +A  ++  M   G+  DV  YN LI
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046

Query: 407  AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             G+   G+      +  E+ +  +   + TY +LV A+
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 275/546 (50%), Gaps = 43/546 (7%)

Query: 8   TIEDITELIRNHHWSKLKNTDPNTVIL----QLFNSDADPVLI------LRYFCWSTKEL 57
           T E I++ + +  W  ++   PN         L+N  + P L+      L   C  TK  
Sbjct: 70  TEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSY 129

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNS 116
               +++L  RL          PK+   L   V   +  +   +F  L+   D L  ++S
Sbjct: 130 --CLAVVLLARL--------PSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSS 179

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I+ D+L+    +  +    F+ F    + G+   + +CN +L   +K  + E    +Y E
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R RI   + +FN ++N LCK GKL KA + +  M+ LG  P VV+YN +I GY  +G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I     A  +   M   GI P+  T+ +LI G CK+  +  A  +F++M   G+    VT
Sbjct: 300 IE---GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 356

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+LI+G C  G L+ A + RDEM+  G+ P+V T N L++    +  + +A  +  ++ 
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G+ P  ITYN LI+ Y + G  + AF + N ML +G+ P   TY  LI  LSR   ++
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++  ++++ G+   ++ +N +V   C +G  ++A  LL E   M+++   P+ VT+N
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE---MDRKSVPPDEVTFN 533

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEK 520
            L++G C++GK+E+A  LL+E+  +G+ P+  +Y                  VR+EM+  
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593

Query: 521 GFIPDI 526
           GF P +
Sbjct: 594 GFNPTL 599



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 196/368 (53%), Gaps = 35/368 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V+S N ++      G  E    +   M+ + IE +  ++  +++G+CK G+L +A
Sbjct: 279 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 338

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
           S + + M  +G+ P  VTYN LIDGYC KG +                            
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+M +AD + K+M + GI+P+ +T+N LI+G+ +  N   A  +  EM S GI   
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            VTY SLI  L    ++ EA  L ++++  G+ P+V+  NA+++G C    VE+A +L  
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++  + + P  +T+NTL+   C+EG++E+A  + + M  RG+ PD  +YN LI+G  R G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + +E+++ G    L+TYN L+  LCK+ +   A  LL EM     +   P+  
Sbjct: 579 DIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV---NKGISPDDS 635

Query: 474 TYNVLIKG 481
           TY  LI+G
Sbjct: 636 TYLSLIEG 643



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 19/259 (7%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           + ++ L+   C   + DEA      M   G+ P + T N +++ F K   +E A VL+ +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +    +S +V T+N +++  CKEG+++ A      M   G  P+V +YN +I G S  GN
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +EG R I++ +   G+     TY  L+  +CK+G+ ++A  L D+M ++      PN VT
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI---GLVPNAVT 356

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMM 518
           YN LI G+C KG LE A    +E+++KG++P+ +TY ++                 +EM 
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416

Query: 519 EKGFIPDIEGHMYNISGTS 537
           +KG IPD   +   I+G S
Sbjct: 417 KKGIIPDAITYNILINGYS 435



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 7/154 (4%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I+ + ++  +  N      F   K      +    ++ N L++   +EGK E+   +  E
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK--K 234
           MKRR I+ +  S+N +++G  + G +  A  + ++M S+G +P ++TYN LI   CK  +
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           G +     A+ + K+MV  GI P++ T+ +LI+G
Sbjct: 615 GDL-----AEELLKEMVNKGISPDDSTYLSLIEG 643


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 220/378 (58%), Gaps = 10/378 (2%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFV 192
           EA    GD    G   + ++ N L+ A  + G+ +  E V   M+     + NL +FN +
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM 229

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NGLCKAG++  A  + ++M   G++P VV+YN L+ GYCK   +G ++++ AVF +M +
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK---VGCLHESLAVFSEMTQ 286

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++P+ VTF +LI   CK  N+  A+ +  +M   G+    VT+ +LI+G C  G LD+
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+   +EM   G++P+VV  NALING+CK   ++ AR L  ++  + + P V+TY+T+I 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G ++ AF +   ML +GVLPD  TY+ LI GL  E  +     +   ++  G++ 
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY  L+   CK+G  +KA+SL DEM    ++   P++VTY+VLI G  +  + ++A+
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMI---RKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 493 GLLNELLEKGLIPNQTTY 510
            LL +L  +  +P+   Y
Sbjct: 524 RLLFKLYHEDPVPDNIKY 541



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 222/428 (51%), Gaps = 37/428 (8%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            D L+ +Y    +P L   A   A   G   SV + N +L AL  +            M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
           R  +  N+ ++N ++  LC  G+L +A  ++ DM+  G +P  VTYN L+  +C+ G + 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 238 --------------------------------GKMYKADAVFKDMVENGILPNEVTFNTL 265
                                           G+M  A  VF +MV  G+ P+ V++NTL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+CK   +  ++ VF EM   G+   VVT+ SLI+  C  G L++AVAL  +M   GL
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N VT  ALI+GFCKK  ++ A +  +++ + G+ PSV+ YN LI+ YCK GRM+ A  
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + V PDV TY+ +I+G  + GN++    +  +++  G+    +TY+ L+  LC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++ +   A  L + M ++  +   P+  TY  LI G C++G +E A  L +E++ KG++P
Sbjct: 445 EEKRLNDACELFENMLQLGVQ---PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 506 NQTTYQIV 513
           +  TY ++
Sbjct: 502 DVVTYSVL 509



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 221/451 (49%), Gaps = 30/451 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++   K G+      +F  +    + L  + +  + L+  Y K    H     F    
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEM--VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL   V++   L+ A  K G  E    +  +M+ R + +N  +F  +++G CK G L+
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A   +E+M+  G+ P VV YN LI+GYCK   +G+M  A  + ++M    + P+ VT++
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCK---LGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I G+CK  N+ +A ++ ++M   G+    +TY+SLI GLC + +L++A  L + M+  
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P+  T   LI+G CK+  VEKA  L D++  +G+ P V+TY+ LI+   K  R ++A
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +     +PD   Y+ L+   S                    +A   +   L+  
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCS--------------------KAEFKSVVALLKG 562

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            C  G  K+A    D++++   ++ W  +   Y++LI G C+ G +  A     ++L  G
Sbjct: 563 FCMKGLMKEA----DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
             PN T+   +   + E+G + + +  + ++
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 162/324 (50%), Gaps = 56/324 (17%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  P+   +N ++     D ++ +A +    M  HG+A  V TYN L+  LC  G+L+EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 314 VALRDEMMASGL------------------------------------KPNVVTSNALIN 337
           V +  +M  +G                                     KPN+VT N+++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK   +E AR +FD++  +GL+P V++YNTL+  YCK G + ++ A+ + M  RG++P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV T+  LI    + GN+E    ++ ++   G+R   VT+  L+   CK G    A+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---- 513
           +EM K   +   P++V YN LI G+C+ G+++ A  L+ E+  K + P+  TY  +    
Sbjct: 352 EEMRKCGIQ---PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 514 ------------REEMMEKGFIPD 525
                        ++M++KG +PD
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPD 432



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 53/335 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ SV+  N L+    K G+ +    + +EM+ +R++ ++ +++ +++G CK G L+ A
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   GV P  +TY+ LI G C++    ++  A  +F++M++ G+ P+E T+ TL
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGLCEEK---RLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL--------------------- 304
           IDG CK+ N+  A+ + +EM   G+   VVTY+ LINGL                     
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 305 -----------------------------CVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
                                        C+ G + EA  +   M+    K +    + L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G C+   V KA      +   G SP+  +  +L+    +EG + +A      +L    
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           L D      LI    +EGNV+ + +++  +  +G+
Sbjct: 655 LADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 689



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 21/186 (11%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           ++ LI +Y    R   A A        G  P V  YN ++  LS + ++   R  ++ ++
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALS-DASLPSARRFLSSML 144

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G+   + TYNILV ALC  G+ ++AV ++ +   M      PN VTYN L+  FC+ G
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGD---MRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 487 KLEDANGLLNELLEKG-LIPNQTTY----------------QIVREEMMEKGFIPDIEGH 529
           +L+ A  +++ + E+G   PN  T+                + V +EM+ +G  PD+  +
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 530 MYNISG 535
              +SG
Sbjct: 262 NTLLSG 267



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 47/265 (17%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ + L+R L +E +  D   +++ M +  ++ +  ++  +++G CK G + KA
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             + ++M   GV P VVTY++LI+G  K                                
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547

Query: 238 -------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
                              G M +AD V++ M++     +   ++ LI G C+  N+  A
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +   ++M   G +    +  SL+ GL  +G + EA     +++      +   S ALI+ 
Sbjct: 608 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDL 667

Query: 339 FCKKKLVEKARVLFDDISEQGLSPS 363
             K+  V+    +   ++  GL PS
Sbjct: 668 NRKEGNVDALIDVLCGMARDGLLPS 692


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 217/377 (57%), Gaps = 6/377 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +V S N L+  L +    +    +  +M +  I     +FN ++NGLC  GK+ +
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++  +M   G  P V++YN +I+G CK G       A  VFK M +NG  P+ VT+NT
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSM---AVDVFKKMEQNGCKPDVVTYNT 233

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CKD  ++ AM+   EM   GI   V TYN +++G C+ G+L+EA  L  EM+   
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+ VT   L++G CK+ +V +AR++F+ ++E+G+ P++ TYN L+D YC +  M +A 
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M+ +G  P V +YN LI G  +   ++  ++++ E+ +  +    VTY+ L+  L
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G+ K+A+++  EM         PN+VTY++L+ GFC+ G L++A  LL  + EK L 
Sbjct: 414 CQFGRPKEALNIFKEMCSY---GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470

Query: 505 PNQTTYQIVREEMMEKG 521
           PN   + I+ E M   G
Sbjct: 471 PNIVHHTILIEGMFIAG 487



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 218/377 (57%), Gaps = 6/377 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  + N L+  L  EGK ++   ++ EM RR  E N+ S+N ++NGLCK G  + A
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMA 212

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+ + M+  G  P VVTYN +ID  CK   +     A     +M++ GI PN  T+N +
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND---AMEFLSEMLDRGIPPNVFTYNCM 269

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GFC    ++ A ++F+EM    +    VT   L++GLC +G + EA  + + M   G+
Sbjct: 270 VHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN+ T NAL++G+C ++L+ +A+ +F+ +  QG +P V +YN LI+ +CK  RM++A +
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKS 389

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + + PD  TY+ L+ GL + G  +   NI  E+ + G+   LVTY+IL+   C
Sbjct: 390 LLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G   +A+ LL  M   +++K  PNIV + +LI+G    GKLE A  L ++L   G+ P
Sbjct: 450 KHGHLDEALKLLKSM---QEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506

Query: 506 NQTTYQIVREEMMEKGF 522
              TY ++ + ++++G 
Sbjct: 507 TIRTYTVMIKGLLKEGL 523



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 215/380 (56%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  + FK+    G K  V++ N ++ +L K+    D      EM  R I  N+ ++N ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C  G+LN+A+ + ++M    V P  VT  IL+DG CK+G + +   A  VF+ M E 
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE---ARLVFETMTEK 327

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ PN  T+N L+DG+C    ++ A KVFE M   G A GV +YN LING C   ++DEA
Sbjct: 328 GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEA 387

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +L  EM    L P+ VT + L+ G C+    ++A  +F ++   GL P+++TY+ L+D 
Sbjct: 388 KSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDG 447

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CK G +++A  +  SM ++ + P++  +  LI G+   G +E  + + ++L  +G+R  
Sbjct: 448 FCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPT 507

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TY +++  L K+G S +A  L     KME +   PN  +YNV+I+GF Q      A  
Sbjct: 508 IRTYTVMIKGLLKEGLSDEAYDLFR---KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L++E++ K    N +T+Q++
Sbjct: 565 LIDEMVGKRFSANLSTFQML 584



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 158/291 (54%), Gaps = 3/291 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L KEG   +   V++ M  + +E N+ ++N +++G C    +N+A  + E M   G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P V +YNILI+G+CK     +M +A ++  +M    + P+ VT++TL+ G C+     
Sbjct: 364 CAPGVHSYNILINGFCKSR---RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPK 420

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+ +F+EM S+G+   +VTY+ L++G C  G LDEA+ L   M    L+PN+V    LI
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G      +E A+ LF  +   G+ P++ TY  +I    KEG  ++A+ +   M D G L
Sbjct: 481 EGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 540

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           P+  +YN +I G  +  +      +++E+V     A L T+ +L+    +D
Sbjct: 541 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQD 591



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 149/307 (48%), Gaps = 21/307 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A F  MV     P+   F   +  F K +  S  + +  +M   G+   V + N LIN
Sbjct: 72  ALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLIN 131

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC    +D AV++  +M   G+ P   T NALING C +  +++A  LF+++  +G  P
Sbjct: 132 CLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+YNT+I+  CK G    A  +   M   G  PDV TYN +I  L ++  V      +
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+++ G+   + TYN +V   C  G+  +A  L  EM   +     P+ VT  +L+ G 
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD---VMPDTVTLTILVDGL 308

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           C++G + +A  +   + EKG+ PN +TY                  V E M+ +G  P +
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 527 EGHMYNI 533
             H YNI
Sbjct: 369 --HSYNI 373



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +I  A+  F  M        V  +   +       +    V+L ++M   G+  NV + N
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LIN  C+   V+ A  +   + + G+ P+  T+N LI+  C EG++++A  + N M+ R
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+V +YN +I GL + GN     ++  ++  NG +  +VTYN ++ +LCKD     A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
           +  L EM         PN+ TYN ++ GFC  G+L +A  L  E++ + ++P+  T  I 
Sbjct: 248 MEFLSEML---DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 513 ---------------VREEMMEKGFIPDIEGH 529
                          V E M EKG  P+I  +
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTY 336


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 220/378 (58%), Gaps = 10/378 (2%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFV 192
           EA    GD    G   + ++ N L+ A  + G+ +  E V   M+     + NL +FN +
Sbjct: 28  EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM 87

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NGLCKAG++  A  + ++M   G++P VV+YN L+ GYCK   +G ++++ AVF +M +
Sbjct: 88  VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK---VGCLHESLAVFSEMTQ 144

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++P+ VTF +LI   CK  N+  A+ +  +M   G+    VT+ +LI+G C  G LD+
Sbjct: 145 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 204

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+   +EM   G++P+VV  NALING+CK   ++ AR L  ++  + + P V+TY+T+I 
Sbjct: 205 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 264

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G ++ AF +   ML +GVLPD  TY+ LI GL  E  +     +   ++  G++ 
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 324

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY  L+   CK+G  +KA+SL DEM    ++   P++VTY+VLI G  +  + ++A+
Sbjct: 325 DEFTYTTLIDGHCKEGNVEKALSLHDEMI---RKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 493 GLLNELLEKGLIPNQTTY 510
            LL +L  +  +P+   Y
Sbjct: 382 RLLFKLYHEDPVPDNIKY 399



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 217/370 (58%), Gaps = 7/370 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +V + N L+RAL   G+ E+   V  +M+      N  ++N ++   C+AG+L+ 
Sbjct: 4   HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63

Query: 205 ASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           A  ++  M+  G   P +VT+N +++G CK    G+M  A  VF +MV  G+ P+ V++N
Sbjct: 64  AERVVSLMREEGNAKPNLVTFNSMVNGLCKA---GRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+ G+CK   +  ++ VF EM   G+   VVT+ SLI+  C  G L++AVAL  +M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+ N VT  ALI+GFCKK  ++ A +  +++ + G+ PSV+ YN LI+ YCK GRM+ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  + V PDV TY+ +I+G  + GN++    +  +++  G+    +TY+ L+  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC++ +   A  L + M ++  +   P+  TY  LI G C++G +E A  L +E++ KG+
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQ---PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 504 IPNQTTYQIV 513
           +P+  TY ++
Sbjct: 358 LPDVVTYSVL 367



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 221/451 (49%), Gaps = 30/451 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++   K G+      +F  +    + L  + +  + L+  Y K    H     F    
Sbjct: 86  SMVNGLCKAGRMEGARKVFDEMV--REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL   V++   L+ A  K G  E    +  +M+ R + +N  +F  +++G CK G L+
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A   +E+M+  G+ P VV YN LI+GYCK   +G+M  A  + ++M    + P+ VT++
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCK---LGRMDLARELIREMEAKRVKPDVVTYS 260

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I G+CK  N+ +A ++ ++M   G+    +TY+SLI GLC + +L++A  L + M+  
Sbjct: 261 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 320

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P+  T   LI+G CK+  VEKA  L D++  +G+ P V+TY+ LI+   K  R ++A
Sbjct: 321 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 380

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +     +PD   Y+ L+   S                    +A   +   L+  
Sbjct: 381 HRLLFKLYHEDPVPDNIKYDALMLCCS--------------------KAEFKSVVALLKG 420

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            C  G  K+A    D++++   ++ W  +   Y++LI G C+ G +  A     ++L  G
Sbjct: 421 FCMKGLMKEA----DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
             PN T+   +   + E+G + + +  + ++
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 161/293 (54%), Gaps = 20/293 (6%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV +G+ PN  T+N L+   C    +  A+ V  +M   G A   VTYN+L+   C  G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 310 LDEAVALRDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           LD A  +   M   G  KPN+VT N+++NG CK   +E AR +FD++  +GL+P V++YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+  YCK G + ++ A+ + M  RG++PDV T+  LI    + GN+E    ++ ++   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+R   VT+  L+   CK G    A+  ++EM K   +   P++V YN LI G+C+ G++
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ---PSVVCYNALINGYCKLGRM 237

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           + A  L+ E+  K + P+  TY  +                 ++M++KG +PD
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 290



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 53/335 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ SV+  N L+    K G+ +    + +EM+ +R++ ++ +++ +++G CK G L+ A
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 275

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   GV P  +TY+ LI G C++    ++  A  +F++M++ G+ P+E T+ TL
Sbjct: 276 FQLNQKMLKKGVLPDAITYSSLIRGLCEEK---RLNDACELFENMLQLGVQPDEFTYTTL 332

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL--------------------- 304
           IDG CK+ N+  A+ + +EM   G+   VVTY+ LINGL                     
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392

Query: 305 -----------------------------CVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
                                        C+ G + EA  +   M+    K +    + L
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G C+   V KA      +   G SP+  +  +L+    +EG + +A      +L    
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 512

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           L D      LI    +EGNV+ + +++  +  +G+
Sbjct: 513 LADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 547



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 47/265 (17%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ + L+R L +E +  D   +++ M +  ++ +  ++  +++G CK G + KA
Sbjct: 286 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 345

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGY---------------------------------- 231
             + ++M   GV P VVTY++LI+G                                   
Sbjct: 346 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 405

Query: 232 CKKGGI-------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           C K                G M +AD V++ M++     +   ++ LI G C+  N+  A
Sbjct: 406 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 465

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +   ++M   G +    +  SL+ GL  +G + EA     +++      +   S ALI+ 
Sbjct: 466 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDL 525

Query: 339 FCKKKLVEKARVLFDDISEQGLSPS 363
             K+  V+    +   ++  GL PS
Sbjct: 526 NRKEGNVDALIDVLCGMARDGLLPS 550


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/416 (33%), Positives = 234/416 (56%), Gaps = 24/416 (5%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  + F    + G+  +  S N +  +L + G+  +   +  +M+ R    ++ S++ V+
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NG C+ G+L +   ++E+M+  G+ P   TYN +I   CK G   K+ +A+ V ++M+  
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG---KVAEAERVLREMISE 352

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+ V + TLIDGFCK  N+S+A ++F+EM    I+   +TY ++I GLC  G++ EA
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  EM+   L+P+ VT  ALI+G+CK+  +++A  L + + + GL+P+++TY  L D 
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G ++ A  + + M  +G+  ++ TYN L+ GL + GN++    +M ++   G    
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            VTY  L+ A CK  +  +A  LL +M   E +   P +VT+NVL+ GFC  G LED   
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ---PTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 494 LLNELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNI 533
           LL  +LEKG++PN TTY  + ++                M  KG +PD  G+ YNI
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD--GNTYNI 643



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 235/476 (49%), Gaps = 26/476 (5%)

Query: 51  CWSTKELRA-SHSLLLTGRLL--HSLVVAKKY----PKIRSF---LHMFVKNGKFTSVST 100
           CW+T      +HSL   GR++  H L++  +     P + S+   ++ + + G+   V  
Sbjct: 250 CWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLK 309

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +   +      L  N    + ++L   K  K        +     G+    +    L+  
Sbjct: 310 LIEEMQI--KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 367

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
             K G       ++ EM++R+I  +  ++  V+ GLC+ G++ +A  +  +M    + P 
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
            VTY  LIDGYCK+G   KM +A ++   M++ G+ PN VT+  L DG CK   +  A +
Sbjct: 428 EVTYTALIDGYCKEG---KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +  EM   G+   + TYNSL+NGLC  G +D+AV L  +M  +G  P+ VT   L++ +C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K + + +A  L   + ++ L P+V+T+N L++ +C  G +ED   +   ML++G++P+ +
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN LI       N+     I   +   G+     TYNIL+   CK    K+A  L  +M
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 461 ----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
               F +        + +YN LIKGF ++ K  +A  L  ++  +GL+ ++  Y I
Sbjct: 665 VGKGFNL-------TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 162/313 (51%), Gaps = 3/313 (0%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+   ++   L+    KEGK ++   ++ +M +  +  N+ ++  + +GLCK G+++ A+
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +++ +M   G+   + TYN L++G CK G I +  K   + KDM   G  P+ VT+ TL+
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK---LMKDMEVAGFHPDAVTYTTLM 540

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D +CK   +  A ++  +M    +   VVT+N L+NG C+ G L++   L   M+  G+ 
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN  T N+LI  +C +  +     ++  +  +G+ P   TYN LI  +CK   M++A+ +
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 660

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+ +G    VS+YN LI G  +       R +  ++   G+ A    YNI       
Sbjct: 661 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYD 720

Query: 447 DGKSKKAVSLLDE 459
           +GK +  + L DE
Sbjct: 721 EGKMELTLELCDE 733



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 167/348 (47%), Gaps = 5/348 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           + G+      +FH +  C   L  + +    L+  Y K  K    F    +    GL  +
Sbjct: 405 QTGRVMEADKLFHEM-VCK-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++   L   L K G+ +    +  EM R+ +ELN+ ++N ++NGLCKAG +++A  +M+
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 522

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           DM+  G  P  VTY  L+D YCK     +M +A  + + M++  + P  VTFN L++GFC
Sbjct: 523 DMEVAGFHPDAVTYTTLMDAYCKSR---EMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +    K+ + M   GI     TYNSLI   C+   +     +   M A G+ P+  
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI G CK + +++A  L  D+  +G + +V +YN LI  + K  +  +A  +   M
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 699

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
              G++ D   YN        EG +E    + +E +   +   + T N
Sbjct: 700 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 157/301 (52%), Gaps = 13/301 (4%)

Query: 213 KSLGVSPKV--VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           K  G  P+V  + + +L++        G + +A  +F  M+  G+L +  + N  I    
Sbjct: 176 KDWGSDPRVFDIFFQVLVEA-------GMLDEARKLFDKMLNYGLLISVDSCNLFISHLS 228

Query: 271 KD-ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           +D + I  A+KVF E    G+     +YN + + LC  G++ EA  L  +M   G  P+V
Sbjct: 229 EDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           ++ + +ING+C+   +++   L +++  +GL P+  TYN +I   CK G++ +A  +   
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+  G+ PD   Y  LI G  + GNV     + +E+    +    +TY  ++  LC+ G+
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  L  EM     E   P+ VTY  LI G+C++GK+++A  L N++L+ GL PN  T
Sbjct: 409 VMEADKLFHEMVCKRLE---PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465

Query: 510 Y 510
           Y
Sbjct: 466 Y 466


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 251/509 (49%), Gaps = 77/509 (15%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           L M  ++G   S   I  +L + S +   ++++ D+L+ +YV+  K + G + FK     
Sbjct: 87  LRMIRRSG--VSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRK 144

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S+ +CN LL  LVK G  +    VY E+ R  IELN+ + N ++N LCK  K++  
Sbjct: 145 GFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDV 204

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY------------------------ 241
              + DM+  G+   +VTYN LI+ YC++G +G+ +                        
Sbjct: 205 KPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVING 264

Query: 242 --------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                   +A  VF +M+  G+ P+  T+NTL+   C++ N   A  +F +M   G++  
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324

Query: 294 VVTYNSLI-----------------------------------NGLCVDGKLDEAVALRD 318
           +++++SLI                                   NG C +G + EA+ +RD
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRD 384

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M+  G   +VV  N ++NG CKKKL+  A  LFD++ E+G+ P   T+ TLI  +CKEG
Sbjct: 385 KMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEG 444

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M  A ++   M  + + PD+ TYN LI G  +   +E    + NE+++  +    ++Y 
Sbjct: 445 NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ILV   C  G   +A  L DEM +   +   P +VT N +IKG+C+ G L  A+  L ++
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIK---PTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 499 LEKGLIPNQTTYQ-----IVREEMMEKGF 522
           + +G+ P+  TY       V+ E M+K F
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAF 590



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 253/529 (47%), Gaps = 126/529 (23%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS++  ++ + +V      L +E +      G++ +V + N ++ AL K+ K +DV+   
Sbjct: 154 NSLLGGLVKMGWVD-----LAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFL 208

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M+++ I  ++ ++N ++N  C+ G L +A ++M  M   G+ P + TYN +I+G CKK
Sbjct: 209 IDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKK 268

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +  +A  VF +M+  G+ P+  T+NTL+   C++ N   A  +F +M   G++  +
Sbjct: 269 G---RYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDL 325

Query: 295 VTYNSLI-----------------------------------NGLCVDGKLDEAVALRDE 319
           ++++SLI                                   NG C +G + EA+ +RD+
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G   +VV  N ++NG CKKKL+  A  LFD++ E+G+ P   T+ TLI  +CKEG 
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN----------- 428
           M  A ++   M  + + PD+ TYN LI G  +   +E    + NE+++            
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505

Query: 429 ------------------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF--- 461
                                   G++  LVT N ++   C+ G   KA   L +M    
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565

Query: 462 -----------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
                                        KME +   P++VTYNV++ GFC++G++++A 
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625

Query: 493 GLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
            +L +++E+G+ P+++TY  +                 +EM+++GF+PD
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 224/416 (53%), Gaps = 8/416 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G++     +F+ +   S  L  ++   + L++   +N       + F      G+   
Sbjct: 267 KKGRYVRAKGVFNEM--LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++S + L+    + G  +     +++MK   +  +   +  ++NG C+ G +++A +I +
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRD 384

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G +  VV YN +++G CKK  +     A+A+F +MVE G++P+  TF TLI G C
Sbjct: 385 KMLEQGCALDVVAYNTILNGLCKKKLLAD---ANALFDEMVERGVVPDFCTFTTLIHGHC 441

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+ N+  A+ +F  M    I   +VTYN LI+G C   ++++A  L +EM++  + PN +
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +   L+NG+C    V +A  L+D++  +G+ P+++T NT+I  YC+ G +  A      M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +  GV PD  TYN LI G  +   ++    ++N++   G++  +VTYN+++   C+ G+ 
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           ++A  +L +M +   +   P+  TY  LI G+  +  L++A    +E+L++G +P+
Sbjct: 622 QEAELILRKMIERGID---PDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 55/327 (16%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + + F+ LI  + +   ++     F+ +   G    +   NSL+ GL   G +D A  + 
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           +E+  SG++ NV T N ++N  CK   ++  +    D+ ++G+   ++TYNTLI+AYC+E
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G + +AF + NSM  +G+ P + TYN +I GL ++G     + + NE+++ G+     TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK--------------------------------MEK 465
           N L+   C++    +A  +  +M                                  M+ 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------- 514
               P+ V Y +LI G+C+ G + +A  + +++LE+G   +   Y  +            
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 515 -----EEMMEKGFIPD-------IEGH 529
                +EM+E+G +PD       I GH
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHGH 440


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 213/368 (57%), Gaps = 6/368 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V S N L+R     G  E     ++EM+R R   N+ ++N V+   CK  ++++A
Sbjct: 198 GVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEA 257

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M   G+ P ++TYN++I+G C+   +G++ +   V  +M   G  P+ VT+NTL
Sbjct: 258 FKLLRSMGLEGLEPNLLTYNMVINGLCR---VGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G+CK  N   A+ +  EM  +G+   VVTY SLIN +C  G L+ A+   D+M   GL
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN VT  +LINGF +K  +++A  ++D++   G  P+++TYN L++ +C  GRME+A  
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G+ PDV +Y+ +IAG  R   ++    +  E+V  G+    +TY+ L+  LC
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +  +  +A  L  EM     +   P+  TY  LI G+C++G L +A  L +E+++KG +P
Sbjct: 495 EQRRLNEACDLFQEML---NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551

Query: 506 NQTTYQIV 513
           +  TY ++
Sbjct: 552 DTVTYNVL 559



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/366 (35%), Positives = 213/366 (58%), Gaps = 6/366 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N ++ A  K  + ++   + + M    +E NL ++N V+NGLC+ G++ + S ++
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            +M   G +P  VTYN L++GYCK   +G  ++A  +  +M+ NG+ P+ VT+ +LI+  
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCK---VGNFHQALVLHSEMLRNGLPPDVVTYTSLINTM 353

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  N++ AM+ F++M   G+    VTY SLING    G +DEA  + DEM+ SG  P +
Sbjct: 354 CKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI 413

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT NAL+NG C    +E+A  L   +  +GLSP V++Y+T+I  +C+   ++ AF M   
Sbjct: 414 VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++GV PD  TY+ LI GL  +  +    ++  E++N  +     TY  L+   CK+G 
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A++L DEM    K+   P+ VTYNVLI G  ++ +  +A  LL +L     IPN  T
Sbjct: 534 LNEALNLHDEMI---KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590

Query: 510 YQIVRE 515
           Y  + E
Sbjct: 591 YDTLIE 596



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 240/441 (54%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + ++ AY K  +    F+  +  G  GL+ ++L+ N ++  L + G+ E+   V 
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R+    +  ++N ++NG CK G  ++A  +  +M   G+ P VVTY  LI+  CK 
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKA 356

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A   F  M   G+ PN VT+ +LI+GF +   +  A ++++EM   G    +
Sbjct: 357 GNLN---RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI 413

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+L+NG CV G+++EA+ L   M   GL P+VV+ + +I GFC+ + +++A  +  +
Sbjct: 414 VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G+SP  ITY++LI   C++ R+ +A  +   ML++ +LPD  TY  LI G  +EG+
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    N+ +E++  G     VTYN+L+  L K  ++++A  LL ++F    ++  PN +T
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF---YDESIPNGIT 590

Query: 475 YNV---------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           Y+                LIKGFC KG + +A+ +   ++++   PN+  Y ++      
Sbjct: 591 YDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCR 650

Query: 514 ----------REEMMEKGFIP 524
                      +EM++ GFIP
Sbjct: 651 DGNVHKAHKLYKEMVDFGFIP 671



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 199/387 (51%), Gaps = 52/387 (13%)

Query: 188 SFNFVLNGLCKAGK-LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           S+N +L+ + +  K +  A  +  +M + GVS  V +YNILI G+C  G +    +    
Sbjct: 169 SYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR---F 225

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F++M  N  LPN VT+NT+I  +CK + I  A K+   MG  G+   ++TYN +INGLC 
Sbjct: 226 FEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCR 285

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G+++E   +  EM   G  P+ VT N L+NG+CK     +A VL  ++   GL P V+T
Sbjct: 286 VGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVT 345

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y +LI+  CK G +  A    + M  RG+ P+  TY  LI G S++G ++    I +E++
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSL----------------------------LD 458
            +G    +VTYN L+   C  G+ ++A+ L                            LD
Sbjct: 406 RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELD 465

Query: 459 EMFKMEKEK----KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
             F+M  E       P+ +TY+ LI+G C++ +L +A  L  E+L K L+P++ TY    
Sbjct: 466 RAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLI 525

Query: 513 --------------VREEMMEKGFIPD 525
                         + +EM++KGF+PD
Sbjct: 526 NGYCKEGDLNEALNLHDEMIKKGFLPD 552



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 253 NGILPNEVTFNTLIDGF--CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           NG +P  +++N ++D    C+   I A  KV+ EM + G++  V +YN LI G C  G L
Sbjct: 161 NGFMPGVLSYNAILDSIVRCRKPVIFAE-KVYREMIASGVSLNVFSYNILIRGFCAAGNL 219

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           +  +   +EM  +   PNVVT N +I  +CK K +++A  L   +  +GL P+++TYN +
Sbjct: 220 EMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMV 279

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+  C+ GR+E+   +   M  +G  PD  TYN L+ G  + GN      + +E++ NG+
Sbjct: 280 INGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGL 339

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTY  L+  +CK G   +A+   D+M         PN VTY  LI GF QKG +++
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQM---HVRGLRPNGVTYTSLINGFSQKGFMDE 396

Query: 491 ANGLLNELLEKGLIPNQTTYQIV--------REE--------MMEKGFIPDIEGHMYNIS 534
           A  + +E++  G  P   TY  +        R E        M  KG  PD+  +   I+
Sbjct: 397 AYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIA 456

Query: 535 G 535
           G
Sbjct: 457 G 457



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 58/416 (13%)

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQ 156
           FH        + RN +  D++    + N     G      E F +    GL+ + ++   
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    ++G  ++   ++ EM R      + ++N +LNG C +G++ +A  ++  M+  G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP VV+Y+ +I G+C+   + + ++ +A   +MVE G+ P+ +T+++LI G C+   ++
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNA---EMVEKGVSPDAITYSSLIQGLCEQRRLN 500

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F+EM +  +     TY SLING C +G L+EA+ L DEM+  G  P+ VT N LI
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 337 NG--------------------------------------------------FCKKKLVE 346
           NG                                                  FC K L+ 
Sbjct: 561 NGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F+ + ++   P+   YN +I  +C++G +  A  +   M+D G +P   T   L+
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALV 680

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L  EG  E +  ++ +++ +   +       LV    K+G      +LL EM K
Sbjct: 681 KALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAK 736



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 4/250 (1%)

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-LDEAVALRDEMMASGLKPNVVTSN 333
           I  A+ + +    +G   GV++YN++++ +    K +  A  +  EM+ASG+  NV + N
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYN 207

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI GFC    +E     F+++      P+V+TYNT+I AYCK  R+++AF +  SM   
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P++ TYN +I GL R G +E    ++ E+   G     VTYN LV   CK G   +A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + L  EM +       P++VTY  LI   C+ G L  A    +++  +GL PN  TY  +
Sbjct: 328 LVLHSEMLR---NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSL 384

Query: 514 REEMMEKGFI 523
                +KGF+
Sbjct: 385 INGFSQKGFM 394



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 51/267 (19%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ + L++ L ++ +  +   +++EM  + +  +  ++  ++NG CK G LN+A
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------GI-------- 237
            ++ ++M   G  P  VTYN+LI+G  K+                     GI        
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597

Query: 238 -------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
                              G M +AD VF+ M++    PNE  +N +I G C+D N+  A
Sbjct: 598 CSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL--RDEMMASGLKPNVVTSNALI 336
            K+++EM   G     VT  +L+  L  +G +DE + L  RD + +  L  +   S AL+
Sbjct: 658 HKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLS-DAELSKALV 715

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPS 363
               K+  ++    L  ++++ G  PS
Sbjct: 716 QINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 134/390 (34%), Positives = 217/390 (55%), Gaps = 6/390 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++    G+  S ++   L+  L     F+D   ++ +M RR    +  ++N +++  CK
Sbjct: 33  FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 92

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L +A D+++ M   G  P VVTYN ++DG CK     ++ +A  +F +M   G  PN
Sbjct: 93  RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS---SRVEEALLLFNEMERLGCTPN 149

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             + NT+I G C+   I  A +VF EM +  I     +Y  LI+GL   GKL+EA  L  
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG+ P+ VT N +I+G C    +++A  LF  +  +G  PS  T+N LIDA+CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++++AF +   M D G +PDV TY+ LI+GL     V+  R+++ ++V    +  +VT N
Sbjct: 270 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK G+ K+A  +LD M       + P++VTYN L+ G C+ G+ E A  LL+++
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMV---SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           + +GL PN  TY  +   + +   +P+  G
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACG 416



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 233/456 (51%), Gaps = 13/456 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLA 125
           +LLHS V         S +H       F     +F  ++   C  S    +++ID    A
Sbjct: 35  KLLHSGVTPSTV-AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID----A 89

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K        +  K+  + G    V++ N ++  L K  + E+   ++ EM+R     N
Sbjct: 90  SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 149

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             S N ++ GLC+  K+++A  +  +M++  + P   +Y ILIDG  K G + + YK   
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYK--- 206

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F+ M+++GI P+ VT+N +I G C    +  A+++F+ M S G      T+N LI+  C
Sbjct: 207 LFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC 266

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             GKLDEA  L   M   G  P+VVT + LI+G C    V+ AR L +D+ ++   P+V+
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T NTLI   CK GR+++A  + ++M+  G  PDV TYN L+ G  R G  E  R +++++
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G+   +VTY  LV  LCK  +  +A  +  +   M+     PN+ TY  LI GFC  
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ---MKSSGCAPNLFTYTALILGFCSA 443

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G+++    L  E++  G+ P+   Y  +  E+ + G
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 194/349 (55%), Gaps = 4/349 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K GK  +   +++ M    I  +  ++N V++G+C A  L++A ++ + M+S G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P   T+NILID +CK+G + + ++   + K M ++G +P+ VT++TLI G C    + 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFR---LLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  + E+M        VVT N+LI+GLC  G++ EA  + D M++SG  P+VVT N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G C+    E+AR L  D+  +GL+P+V+TY  L+   CK  R+ +A  +   M   G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TY  LI G    G V+G   +  E+V  G+    V Y  L   LCK G+S +A+ +
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           L E  +  + + W + V Y   + G  + GK+E A G + +++  G +P
Sbjct: 488 LREGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 535



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 168/303 (55%), Gaps = 8/303 (2%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    VSP   +Y ILIDG  K G   K+  A  +F+ ++ +G+ P+ V + +LI G C 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAG---KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             +   A ++F +M   G     VTYN +I+  C  G L+EA  L  +M+  G  P+VVT
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +++G CK   VE+A +LF+++   G +P+  ++NT+I   C++ +++ A  + + M 
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            + + PD  +Y  LI GL++ G +     +   ++++G+    VTYN+++  +C      
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 452 KAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A+    E+FK  + K   P+  T+N+LI   C++GKL++A  LL  + + G +P+  TY
Sbjct: 238 EAL----ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTY 293

Query: 511 QIV 513
             +
Sbjct: 294 STL 296



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 15/381 (3%)

Query: 89  FVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
             K GK      +F  +  S  + S    +++I  + LAY  +       E FK     G
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDE----ALELFKSMRSKG 250

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
            + S  + N L+ A  K GK ++   + K M       ++ +++ +++GLC   +++ A 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++EDM      P VVT N LI G CK G   ++ +A  V   MV +G  P+ VT+NTL+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAG---RIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G C+      A ++  +M + G+A  VVTY +L++GLC   +L EA  +  +M +SG  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN+ T  ALI GFC    V+    LF ++   G+SP  + Y TL    CK GR   A  +
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 387 ----RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
               R S+       +V  Y   + GL   G +E     + ++V  G          LV 
Sbjct: 488 LREGRESLRSEAWGDEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVA 545

Query: 443 ALCKDGKSKKAVSLLDEMFKM 463
            LCK G+  +A ++L+E+  +
Sbjct: 546 GLCKSGQGGEARAVLEEIMDL 566


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 247/432 (57%), Gaps = 9/432 (2%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + S L  ++K   +   S +F     C  +   N    +++M    K  K          
Sbjct: 438 VNSLLRGYLKAPLWEEASKLFDEAVDCGVA---NIFTYNIMMSWLCKGGKMDEACSLLDN 494

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + G+  +V+S N ++    ++G  +    V+ +M  R ++ N+ +++ +++G  K G 
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             KA D+ + M SL ++P   T+N +I+G CK   +G+M +A    K+ +E G +P+ +T
Sbjct: 555 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCK---VGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N+++DGF K+ NI +A+ V+ EM   G++  VVTY SLING C   ++D A+  RDEM 
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL+ +V   +ALI+GFCK++ +E A+ LF ++ E GLSP+ I YN++I  +     ME
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A      M++  +  D+ TY  LI GL +EG +    ++  E+++ G+   ++T+++LV
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LC  G+ + A  +L+E   M+++   P+++ YN LI G+ ++G L++A  L +E+L++
Sbjct: 792 NGLCNKGQLENARKILEE---MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848

Query: 502 GLIPNQTTYQIV 513
           GL+P+  TY I+
Sbjct: 849 GLVPDDVTYDIL 860



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 253/465 (54%), Gaps = 16/465 (3%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           LR    ++  G+ ++ LVVA       S +  +   G   S   +F+ ++   D L  N 
Sbjct: 350 LRLKEEMINCGKPMN-LVVAT------SLMKGYCAQGNLDSALNLFNKIT--EDGLFPNK 400

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +   +L+     +       E + +    G+  SV + N LLR  +K   +E+   ++ E
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
                +  N+ ++N +++ LCK GK+++A  ++++M + G+ P VV+YN +I G+C+KG 
Sbjct: 461 AVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKG- 518

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
              M  A +VF DM+   + PN VT++ LIDG  K  +   A+ +F++M S  IA    T
Sbjct: 519 --NMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT 576

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           +N++INGLC  G++ EA       +  G  P+ +T N++++GF K+  ++ A  ++ ++ 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E G+SP+V+TY +LI+ +CK  R++ A   R+ M ++G+  DV+ Y+ LI G  +  ++E
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             +++  EL+  G+    + YN ++    +D  + +A  +  +  KM  ++   ++ TY 
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGF-RDLNNMEAALVWYK--KMINDRIPCDLGTYT 753

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            LI G  ++G+L  A+ L  E+L KG++P+  T+ ++   +  KG
Sbjct: 754 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 798



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 218/378 (57%), Gaps = 7/378 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     + + ++RA +KEG+ E+ E  ++E K R ++L+  +++ ++  +CK    N  
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++E+MK  G  P   T+  +I     +   G M +A  + ++M+  G   N V   +L
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQ---GNMVEALRLKEEMINCGKPMNLVVATSL 371

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+C   N+ +A+ +F ++   G+    VTY+ LI G C  G +++A  L  +M  +G+
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V   N+L+ G+ K  L E+A  LFD+  + G++ ++ TYN ++   CK G+M++A +
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACS 490

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + ++M+++G++P+V +YN +I G  R+GN++   ++ ++++   ++  +VTY+IL+    
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G S+KA+ L D+M  +      P   T+N +I G C+ G++ +A   L   LE+G IP
Sbjct: 551 KKGDSEKALDLFDQMLSLNIA---PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 607

Query: 506 NQTTYQIVREEMMEKGFI 523
           +  TY  + +  +++G I
Sbjct: 608 SCMTYNSIVDGFIKEGNI 625



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 207/431 (48%), Gaps = 48/431 (11%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SIII     A  K    +LG E  +   + G   S  +   ++ A V +G   +   + +
Sbjct: 299 SIIIQ----AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 354

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM      +NL     ++ G C  G L+ A ++   +   G+ P  VTY++LI+G C  G
Sbjct: 355 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 414

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            I    KA  ++  M  NGI P+    N+L+ G+ K      A K+F+E    G+ A + 
Sbjct: 415 NIE---KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIF 470

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN +++ LC  GK+DEA +L D M+  G+ PNVV+ N +I G C+K  ++ A  +F D+
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 356 SEQGLSPSVITY-----------------------------------NTLIDAYCKEGRM 380
             + L P+V+TY                                   NT+I+  CK G+M
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            +A     + L+ G +P   TYN ++ G  +EGN++    +  E+   G+   +VTY  L
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +   CK  +   A+   DEM    +EK    ++  Y+ LI GFC++  +E A  L  ELL
Sbjct: 651 INGFCKSNRIDLALKTRDEM----REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706

Query: 500 EKGLIPNQTTY 510
           E GL PN+  Y
Sbjct: 707 EVGLSPNRIVY 717



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 160/263 (60%), Gaps = 3/263 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S ++ N ++   +KEG  +    VY+EM    +  N+ ++  ++NG CK+ +++ A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               ++M+  G+   V  Y+ LIDG+CK+     M  A  +F +++E G+ PN + +N++
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRR---DMESAQDLFFELLEVGLSPNRIVYNSM 720

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF    N+ AA+  +++M +  I   + TY +LI+GL  +G+L  A  L  EM++ G+
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+++T + L+NG C K  +E AR + +++  + ++PSV+ YNTLI  Y +EG +++AF 
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840

Query: 386 MRNSMLDRGVLPDVSTYNCLIAG 408
           + + MLDRG++PD  TY+ LI G
Sbjct: 841 LHDEMLDRGLVPDDVTYDILING 863



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 36/384 (9%)

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V+++    KR   EL+   FN++LN   +A ++  A D    M    V P V   NIL+ 
Sbjct: 174 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 233

Query: 230 GYCKKGGIGKMY--------------------------------KADAVFKDMVENGILP 257
              ++  IG++                                 +A+  F++  E G+  
Sbjct: 234 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 293

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +   ++ +I   CK  N +  +++ EEM   G      T+ S+I      G + EA+ L+
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           +EM+  G   N+V + +L+ G+C +  ++ A  LF+ I+E GL P+ +TY+ LI+  C  
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +E A  +   M   G+ P V   N L+ G  +    E    + +E V+ G+ A + TY
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTY 472

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NI++  LCK GK  +A SLLD M     +   PN+V+YN +I G C+KG ++ A+ + ++
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMV---NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 529

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           +L + L PN  TY I+ +   +KG
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKG 553



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 240/514 (46%), Gaps = 26/514 (5%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK-YPKIRSFLHM 88
           N VI  L     DP   LRYF  +  +      +     LLH L+ + + +   R  L+ 
Sbjct: 101 NHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNR 160

Query: 89  FVKNGKFTSVSTIFHALSTCSD--SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           +V      S       L  C+       +  + + L+ AY++  +     + F       
Sbjct: 161 YVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQD 220

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V   N LL ALV+     ++  +Y +M  R I  +  + + ++    K G++ +A 
Sbjct: 221 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 280

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +   + K  GV      Y+I+I   CKK       +   + ++M E G +P+E TF ++I
Sbjct: 281 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE---LLEEMKERGWVPSEATFTSVI 337

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
                  N+  A+++ EEM + G    +V   SL+ G C  G LD A+ L +++   GL 
Sbjct: 338 VACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLF 397

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN VT + LI G C    +EKA  L+  +   G+ PSV   N+L+  Y K    E+A  +
Sbjct: 398 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 457

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            +  +D GV  ++ TYN +++ L + G ++   ++++ +VN GM   +V+YN ++   C+
Sbjct: 458 FDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 516

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G    A S+  +M   + +   PN+VTY++LI G  +KG  E A  L +++L   + P 
Sbjct: 517 KGNMDMASSVFSDMLARDLK---PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 573

Query: 507 QTTYQIV-------------REEM---MEKGFIP 524
             T+  +             R+++   +E+GFIP
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 607


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 62/558 (11%)

Query: 26  NTDPNTVILQLFNSDA---DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKI 82
           +T+P ++++ L NS     +P  +L+++ +    +   HS L    LL S++  + +   
Sbjct: 30  STNP-SLLISLLNSKTLIQNPNTLLQFYTYLPPSI-THHSPLPLLSLLPSILRYRHFYAA 87

Query: 83  RSFLHMFVKNGKFTSVS-TIFHALSTCSDSLCRN--SIIIDMLMLAYVKNMKPHLGFEAF 139
           +S L  F+   K +S+   + H   T +   C +    ++D+ + AYV   +PH   + F
Sbjct: 88  KSLLSSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIF 147

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDV---EYVYKEMKRRRIELNLDSFNFVLNGL 196
            R    G++ ++L+CN LL ALV+      +   + V+ +  +  +++N +SFN +++G 
Sbjct: 148 NRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGS 207

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C   +  +A  ++  M+  G  P  +TYN ++DG CKK   G++ +A  +  DM   G+ 
Sbjct: 208 CMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKK---GRLNEARDLLLDMKNKGLF 264

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  TFN L+ G C+   +  A  V E M  + +     TYN +I+G C  G++ EA+ L
Sbjct: 265 PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRL 324

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           R+EM    L P+VVT N LING  +    E+   L +++  +G+ P+ +TYN ++  + K
Sbjct: 325 REEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK 384

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G+M++       M + G LPD+ TYN LI+   + G ++    +M+E+   G++   VT
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444

Query: 437 YNILVGALCKDGKSKKAVSLL----------DEM---------FKMEKEKK----W---- 469
            N ++ ALC++ K  +A  LL          DE+         FK EK  +    W    
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504

Query: 470 -----PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------- 513
                P+I+TYN +I G CQ GK   A   L+ELLE GL+P++ TY  +           
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVE 564

Query: 514 -----REEMMEKGFIPDI 526
                  +M+EK F PD+
Sbjct: 565 KAFQFHNKMVEKNFKPDV 582



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 206/388 (53%), Gaps = 41/388 (10%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    K+G+  +   + +EM+  ++  ++ ++N ++NG  + G   +   ++E+M+ 
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P  VTYN+++  + KKG   KM + D   + M E+G LP+ VT+NTLI   CK   
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKG---KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGK 422

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA--------------------- 313
           +  A ++ +EMG  G+    VT N+++  LC + KLDEA                     
Sbjct: 423 MDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482

Query: 314 --------------VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
                         + L DEM    + P+++T N++I G C+     +A    D++ E G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P  ITYNT+I  YC+EG++E AF   N M+++   PDV T N L+ GL +EG +E   
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + N  ++ G     V+YN ++ +LCK+ +  +A  LL+EM   E++K  P+  TYN ++
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEM---EEKKLGPDCYTYNAIL 659

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            G    G+++DA   ++++ EKG   NQ
Sbjct: 660 GGLTDAGRMKDAEEFISKIAEKGKSENQ 687



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 205/385 (53%), Gaps = 13/385 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           DYG     ++ N +L  L K+G+  +   +  +MK + +  N  +FN ++ G C+ G L 
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTF 262
           +A++++E M    V P   TYN++I G+CK+G I +  +     ++ +EN  + P+ VT+
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMR----LREEMENLKLSPDVVTY 340

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G  +  +     K+ EEM   G+    VTYN ++      GK+DE      +M  
Sbjct: 341 NTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEE 400

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           SG  P++VT N LI+  CK   +++A  L D++  +GL    +T NT++ A C+E ++++
Sbjct: 401 SGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE 460

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  S   RG   D  +Y  LI G  +         + +E+    +   ++TYN ++ 
Sbjct: 461 AHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIA 520

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ GK+ +A+  LDE+    +    P+ +TYN +I G+CQ+G++E A    N+++EK 
Sbjct: 521 GLCQMGKTNQAIDKLDELL---ESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577

Query: 503 LIPNQTTYQ-----IVREEMMEKGF 522
             P+  T       + +E M+EK  
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKAL 602



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 198/376 (52%), Gaps = 23/376 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GF+  +     G+K + ++ N +++  VK+GK ++V+   ++M+      ++ ++N +++
Sbjct: 356 GFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLIS 415

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK GK+++A  +M++M   G+    VT N ++   C++    K+ +A  +       G
Sbjct: 416 WHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER---KLDEAHDLLCSARRRG 472

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              +EV++ TLI G+ K E  S A+++++EM    I   ++TYNS+I GLC  GK ++A+
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
              DE++ SGL P+ +T N +I+G+C++  VEKA    + + E+   P V+T NTL+   
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG +E A  + N+ + +G   D  +YN +I  L +E       +++ E+    +    
Sbjct: 593 CKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDC 652

Query: 435 VTYNILVGALCKDGKSKKA---VSLLDEMFKME-----------------KEKKWPNIVT 474
            TYN ++G L   G+ K A   +S + E  K E                  ++  PN + 
Sbjct: 653 YTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIA 712

Query: 475 YNVLIKGFCQKGKLED 490
           Y+  I   C +G+ +D
Sbjct: 713 YSNKINELCSQGRYKD 728



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 24/267 (8%)

Query: 44  VLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH 103
            LI+ YF    K  +AS +L    RL   +   +  P I ++  M     +    +    
Sbjct: 482 TLIIGYF----KHEKASQAL----RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 104 ALSTCSDS-LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
            L    +S L  + I  + ++  Y +  +    F+   +  +   K  V++CN LL  L 
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KEG  E    ++     +  +++  S+N ++  LCK  +  +A D++E+M+   + P   
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYN ++ G       G+M  A+     + E G   N+     L  G  +D   S   ++ 
Sbjct: 654 TYNAILGGLTDA---GRMKDAEEFISKIAEKGKSENQF----LELGKRQDARTS---EIP 703

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +E   + IA     Y++ IN LC  G+
Sbjct: 704 QEPHPNAIA-----YSNKINELCSQGR 725


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 247/432 (57%), Gaps = 9/432 (2%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + S L  ++K   +   S +F     C  +   N    +++M    K  K          
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVDCGVA---NIFTYNIMMSWLCKGGKMDEACSLLDN 454

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + G+  +V+S N ++    ++G  +    V+ +M  R ++ N+ +++ +++G  K G 
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             KA D+ + M SL ++P   T+N +I+G CK   +G+M +A    K+ +E G +P+ +T
Sbjct: 515 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCK---VGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N+++DGF K+ NI +A+ V+ EM   G++  VVTY SLING C   ++D A+  RDEM 
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL+ +V   +ALI+GFCK++ +E A+ LF ++ E GLSP+ I YN++I  +     ME
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A      M++  +  D+ TY  LI GL +EG +    ++  E+++ G+   ++T+++LV
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LC  G+ + A  +L+E   M+++   P+++ YN LI G+ ++G L++A  L +E+L++
Sbjct: 752 NGLCNKGQLENARKILEE---MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808

Query: 502 GLIPNQTTYQIV 513
           GL+P+  TY I+
Sbjct: 809 GLVPDDVTYDIL 820



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 254/468 (54%), Gaps = 16/468 (3%)

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
            + LR    ++  G+ ++ LVVA       S +  +   G   S   +F+ ++   D L 
Sbjct: 307 VEALRLKEEMINCGKPMN-LVVAT------SLMKGYCAQGNLDSALNLFNKIT--EDGLF 357

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
            N +   +L+     +       E + +    G+  SV + N LLR  +K   +E+   +
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 417

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + E     +  N+ ++N +++ LCK GK+++A  ++++M + G+ P VV+YN +I G+C+
Sbjct: 418 FDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 476

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           KG    M  A +VF DM+   + PN VT++ LIDG  K  +   A+ +F++M S  IA  
Sbjct: 477 KG---NMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             T+N++INGLC  G++ EA       +  G  P+ +T N++++GF K+  ++ A  ++ 
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ E G+SP+V+TY +LI+ +CK  R++ A   R+ M ++G+  DV+ Y+ LI G  +  
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 653

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           ++E  +++  EL+  G+    + YN ++    +D  + +A  +  +  KM  ++   ++ 
Sbjct: 654 DMESAQDLFFELLEVGLSPNRIVYNSMISGF-RDLNNMEAALVWYK--KMINDRIPCDLG 710

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TY  LI G  ++G+L  A+ L  E+L KG++P+  T+ ++   +  KG
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 758



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 218/378 (57%), Gaps = 7/378 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     + + ++RA +KEG+ E+ E  ++E K R ++L+  +++ ++  +CK    N  
Sbjct: 215 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++E+MK  G  P   T+  +I     +   G M +A  + ++M+  G   N V   +L
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQ---GNMVEALRLKEEMINCGKPMNLVVATSL 331

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+C   N+ +A+ +F ++   G+    VTY+ LI G C  G +++A  L  +M  +G+
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 391

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V   N+L+ G+ K  L E+A  LFD+  + G++ ++ TYN ++   CK G+M++A +
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACS 450

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + ++M+++G++P+V +YN +I G  R+GN++   ++ ++++   ++  +VTY+IL+    
Sbjct: 451 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G S+KA+ L D+M  +      P   T+N +I G C+ G++ +A   L   LE+G IP
Sbjct: 511 KKGDSEKALDLFDQMLSLNIA---PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 567

Query: 506 NQTTYQIVREEMMEKGFI 523
           +  TY  + +  +++G I
Sbjct: 568 SCMTYNSIVDGFIKEGNI 585



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 207/431 (48%), Gaps = 48/431 (11%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SIII     A  K    +LG E  +   + G   S  +   ++ A V +G   +   + +
Sbjct: 259 SIIIQ----AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 314

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM      +NL     ++ G C  G L+ A ++   +   G+ P  VTY++LI+G C  G
Sbjct: 315 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 374

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            I    KA  ++  M  NGI P+    N+L+ G+ K      A K+F+E    G+ A + 
Sbjct: 375 NIE---KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIF 430

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN +++ LC  GK+DEA +L D M+  G+ PNVV+ N +I G C+K  ++ A  +F D+
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 356 SEQGLSPSVITY-----------------------------------NTLIDAYCKEGRM 380
             + L P+V+TY                                   NT+I+  CK G+M
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            +A     + L+ G +P   TYN ++ G  +EGN++    +  E+   G+   +VTY  L
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +   CK  +   A+   DEM    +EK    ++  Y+ LI GFC++  +E A  L  ELL
Sbjct: 611 INGFCKSNRIDLALKTRDEM----REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 666

Query: 500 EKGLIPNQTTY 510
           E GL PN+  Y
Sbjct: 667 EVGLSPNRIVY 677



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 160/263 (60%), Gaps = 3/263 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S ++ N ++   +KEG  +    VY+EM    +  N+ ++  ++NG CK+ +++ A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               ++M+  G+   V  Y+ LIDG+CK+     M  A  +F +++E G+ PN + +N++
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRR---DMESAQDLFFELLEVGLSPNRIVYNSM 680

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF    N+ AA+  +++M +  I   + TY +LI+GL  +G+L  A  L  EM++ G+
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+++T + L+NG C K  +E AR + +++  + ++PSV+ YNTLI  Y +EG +++AF 
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800

Query: 386 MRNSMLDRGVLPDVSTYNCLIAG 408
           + + MLDRG++PD  TY+ LI G
Sbjct: 801 LHDEMLDRGLVPDDVTYDILING 823



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 240/514 (46%), Gaps = 26/514 (5%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK-YPKIRSFLHM 88
           N VI  L     DP   LRYF  +  +      +     LLH L+ + + +   R  L+ 
Sbjct: 61  NHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNR 120

Query: 89  FVKNGKFTSVSTIFHALSTCSD--SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           +V      S       L  C+       +  + + L+ AY++  +     + F       
Sbjct: 121 YVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQD 180

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V   N LL ALV+     ++  +Y +M  R I  +  + + ++    K G++ +A 
Sbjct: 181 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 240

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +   + K  GV      Y+I+I   CKK       +   + ++M E G +P+E TF ++I
Sbjct: 241 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE---LLEEMKERGWVPSEATFTSVI 297

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
                  N+  A+++ EEM + G    +V   SL+ G C  G LD A+ L +++   GL 
Sbjct: 298 VACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLF 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN VT + LI G C    +EKA  L+  +   G+ PSV   N+L+  Y K    E+A  +
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            +  +D GV  ++ TYN +++ L + G ++   ++++ +VN GM   +V+YN ++   C+
Sbjct: 418 FDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 476

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G    A S+  +M   + +   PN+VTY++LI G  +KG  E A  L +++L   + P 
Sbjct: 477 KGNMDMASSVFSDMLARDLK---PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533

Query: 507 QTTYQIV-------------REEM---MEKGFIP 524
             T+  +             R+++   +E+GFIP
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 567


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 243/480 (50%), Gaps = 75/480 (15%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++ D+L+  YV+  K   G EAF+     GL  S+ +CN LL  LVK G  +    +Y
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +E+ R  +++N+ + N ++N LCK  K+      + DM+  GV P VVTYN LI+ YC++
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G +                                GK  +A  V  +M++ G+ P+  T+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS----------------------- 299
           N L+   C+++N+  A ++F+EM S G+   +V++++                       
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 300 ------------LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                       LI G C +G + EA+ +RDEM+  G   +VVT N ++NG CK+K++ +
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF +++E+G+ P   T+ TLI+ Y K+G M  A  +   M+ R + PDV TYN LI 
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  +   +E V  + N++++  +    ++Y IL+   C  G   +A  L DEM +   E 
Sbjct: 386 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE- 444

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKGF 522
               I+T N ++KG+C+ G    A+  L+ +L KG++P+  TY       ++EE M++ F
Sbjct: 445 --ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 258/508 (50%), Gaps = 75/508 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++++L   +K    +SFL    + G F  V T     +T  ++ CR  ++ +        
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVT----YNTLINAYCRQGLLEE-------- 150

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF--------------------- 167
                  FE        GLK  V + N ++  L K GK+                     
Sbjct: 151 ------AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 168 --------------EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
                          D E ++ EM  + +  +L SF+ ++  L K G L++A     DMK
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           + G++P  V Y ILI G+C+ G    M +A  V  +M+E G + + VT+NT+++G CK++
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNG---VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +S A ++F EM   G+     T+ +LING   DG +++AV L + M+   LKP+VVT N
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+GFCK   +EK   L++D+  + + P+ I+Y  LI+ YC  G + +AF + + M+++
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G    + T N ++ G  R GN       ++ ++  G+    +TYN L+    K+    +A
Sbjct: 442 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 501

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
            +L++   KME     P+++TYNV++ GF ++G++++A  ++ +++E+G+ P+++TY   
Sbjct: 502 FALVN---KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558

Query: 513 ---------------VREEMMEKGFIPD 525
                          V +EM+++GF+PD
Sbjct: 559 INGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 19/285 (6%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N + F+ L+  + +   +    + F  + S G+   +   NSL+ GL   G +D A  + 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            E++ SG++ NV T N +IN  CK + +E  +    D+ E+G+ P V+TYNTLI+AYC++
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +E+AF + +SM  +G+ P V TYN +I GL + G     + +++E++  GM     TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NIL+   C++     A  + DE   M  +   P++V+++ LI    + G L+ A     +
Sbjct: 206 NILLVECCRNDNMMDAERIFDE---MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 498 LLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           +   GL P+   Y I                VR+EM+E+G + D+
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           L + G+   +   N L+G L K G    A  +  E+ +   +    N+ T N++I   C+
Sbjct: 53  LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ---VNVYTLNIMINALCK 109

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             K+E+    L+++ EKG+ P+  TY  +      +G + +    M ++SG
Sbjct: 110 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG 160


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 214/379 (56%), Gaps = 6/379 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G   FK+  +     +V +   ++ AL + G+  +   ++ EM+ R  E N+ ++  ++N
Sbjct: 58  GINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMIN 117

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK  KL +   I+++M   G+ P V TYN LIDGYCK+G +     A  +   M  N 
Sbjct: 118 AMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEA---AQEILDLMHSNS 174

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PNE T+N LI GFC+ +N+  AM +  +M    +   VVTYNSLI+G C  G LD A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L + M  +G+ P+  T +  I+  CKK  +E+A VLF+ + E+G+  + + Y  LID Y
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G+M+DA ++ + ML    LP+ STYN LI GL +E  V+    +M  ++  G++  +
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY IL+ A+ K+G    A  +LD+M     +   P++  Y   I  FC +G +++A  +
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ---PDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 495 LNELLEKGLIPNQTTYQIV 513
           ++ + E+G++P+  TY +V
Sbjct: 412 MSMMFERGVMPDALTYTLV 430



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 182/371 (49%), Gaps = 44/371 (11%)

Query: 192 VLNGLCKAGKL---------NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----- 237
           ++NG CK G L         N A  +   M   G     V+Y  LI G C+ G +     
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 238 ---------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
                                      G+  +A  +F +M E G  PN  T+  +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+  +    ++ +EM   G+   V TYN+LI+G C +G ++ A  + D M ++   PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI GFC+KK V +A  L   + E  L+PSV+TYN+LI   CK G ++ A+ + N M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            + GV+PD  TY+  I  L ++G +E    + N L   G++A  V Y  L+   CK GK 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A SLLD M     E   PN  TYN LI G C++ K+++A  L+  +++KGL     TY
Sbjct: 301 DDANSLLDRML---TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 511 QIVREEMMEKG 521
            I+   M+++G
Sbjct: 358 TILIVAMLKEG 368



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 244/555 (43%), Gaps = 95/555 (17%)

Query: 61  HSLLLTGRLLHSLVVAKK------YPKIRSF---LHMFVKNGKFTSVSTIFHALST--CS 109
           H L   GR+   + + KK      YP +R++   +H   ++G+      +F  +    C 
Sbjct: 47  HGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCE 106

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            ++   +++I+    A  K  K   G        + GL  SV + N L+    KEG  E 
Sbjct: 107 PNIHTYTVMIN----AMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEA 162

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            + +   M       N  ++N ++ G C+   +++A  ++  M    ++P VVTYN LI 
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G +   Y+   +   M ENG++P++ T++  ID  CK   I  A  +F  +   G
Sbjct: 223 GQCKIGYLDSAYR---LLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I A  V Y +LI+G C  GK+D+A +L D M+     PN  T NALI+G CK++ V++A 
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 350 VLFDDISEQGL-----------------------------------SPSVITYNTLIDAY 374
           +L + + ++GL                                    P V  Y   I A+
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  G +++A  M + M +RGV+PD  TY  +I      G +    +++  + + G     
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459

Query: 435 VTYNILVGALCKDGKSKKA--VSLLD-----------------------EMF-KMEKEKK 468
            TY+ L+  L K+  +KK   V+L D                       E+F KM +   
Sbjct: 460 HTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGC 519

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ--------------IVR 514
            PNI TY  LI G C+ G+L  A  L + + E+G+ P++  Y                VR
Sbjct: 520 SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVR 579

Query: 515 --EEMMEKGFIPDIE 527
               MME G +P +E
Sbjct: 580 LVGAMMEHGHLPLLE 594



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 162/305 (53%), Gaps = 9/305 (2%)

Query: 227 LIDGYCKKGGI------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           +++GYCK G +        +  A +VF  M + G   NEV++  LI G C+   +   + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F++M        V TY  +++ L   G+  EA+ L  EM   G +PN+ T   +IN  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  +E+ R + D++ E+GL PSV TYN LID YCKEG +E A  + + M      P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN LI G  R+ NV     ++++++ + +   +VTYN L+   CK G    A  LL+  
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN-- 238

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             M +    P+  TY+V I   C+KG++E+AN L N L EKG+  N+  Y  + +   + 
Sbjct: 239 -LMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297

Query: 521 GFIPD 525
           G + D
Sbjct: 298 GKMDD 302



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 185/401 (46%), Gaps = 28/401 (6%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K GK    +++   + T  D L  NS   + L+    K  K        +     GLK
Sbjct: 294 YCKAGKMDDANSLLDRMLT-EDCL-PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLK 351

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V +   L+ A++KEG F+    +  +M     + ++  +   ++  C  G + +A D+
Sbjct: 352 CTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           M  M   GV P  +TY ++ID Y   GG+G +  A  V K M + G  P+  T++ LI  
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAY---GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKH 468

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-------GKLDEAVALRDEMM 321
             K+E ++   K             V   +S+ N    D        K + A+ L ++M+
Sbjct: 469 LLKEE-LTKKYK------------NVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  PN+ T   LI G CK   +  A+ LFD ++E+G+SPS   YN+L++  C+ G   
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +  +M++ G LP + + N L  GL  EG+ E  + + + L+  G     V + IL+
Sbjct: 576 DAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             L K+G S     LL     ME      +  TY +LI+G 
Sbjct: 636 DGLLKNGLSDGCSELLG---VMEARGCQIHPQTYRMLIEGL 673



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 31/175 (17%)

Query: 370 LIDAYCKEGRMEDA---------FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +++ YCK G + +A         F++ N M  +G   +  +Y  LI GL   G V+   N
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           I  ++  +     + TY ++V AL + G+  +A++L  EM +   E   PNI TY V+I 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCE---PNIHTYTVMIN 117

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             C++ KLE+   +L                   +EM+EKG +P +  +   I G
Sbjct: 118 AMCKETKLEEGRRIL-------------------DEMVEKGLVPSVPTYNALIDG 153


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 241/455 (52%), Gaps = 38/455 (8%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           KNG       ++  +   + ++C    I++ L+  ++K        + F  A    + ++
Sbjct: 396 KNGNMAKAYDLYTQMK--NKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-AN 452

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           + + N LL  L KEGK  +   ++++M  + +     S+N ++ G C+ G L+ A+ +  
Sbjct: 453 IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFS 512

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGG--------------------------------IG 238
           DM   G+ P V+TY+IL+DGY K G                                 +G
Sbjct: 513 DMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVG 572

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +  +A  + K  VE G +P  +T+N+++DGF K+ ++S+A+  + EM   G++  V+TY 
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LING C +   D A+ +R+EM   GL+ ++    ALI+GFCKK+ +E A  LF ++ + 
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GLSP+ + YN+LI  Y     ME A  ++  ML  G+  D+ TY  LI GL +EG +   
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            ++ +E+   G+   ++ Y +L+  LC  G+ + A  +L E   ME++   PN+  YN L
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAE---MERDSITPNVPIYNAL 809

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           I G  + G L++A  L NE+L+KGL PN TTY I+
Sbjct: 810 IAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 228/421 (54%), Gaps = 12/421 (2%)

Query: 108 CSDSLCRNSII-----IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
           C + L  + I+     ++ L+ A VKN   +   E +++    G+     + + ++RA +
Sbjct: 196 CFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANL 255

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K+   E+ +  + E K R ++L+  +++ V+   CK   +  A  +++DM+  G  P   
Sbjct: 256 KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T+  +I G C K G   M +A  +  +MV  G+  N V   TL+ G+CK + + +A++ F
Sbjct: 316 TFTSVI-GACVKQG--NMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFF 372

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           ++M  +G +   VTY  LI   C +G + +A  L  +M    + P V   N+LI GF K 
Sbjct: 373 DKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKV 432

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           +  E+A  LFD+     ++ ++ TYN+L+   CKEG+M +A  +   MLD+G+ P   +Y
Sbjct: 433 ESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I G  R+GN++   ++ +++++ G++  ++TY+IL+    K+G ++ A  + D   +
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFD---R 548

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  E   P+  TYN+ I G C+ G+  +A  +L + +EKG +P   TY  + +  +++G 
Sbjct: 549 MVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608

Query: 523 I 523
           +
Sbjct: 609 V 609



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 9/433 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K  K  S    F  ++    S   N +   +L+    KN      ++ + +  +  + 
Sbjct: 359 YCKQDKLVSALEFFDKMNENGPS--PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V   N L+R  +K    E+   ++ E     I  N+ ++N +L+ LCK GK+++A+ +
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTL 475

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            + M   G++P  V+YN +I G+C++G +     A +VF DM++ G+ PN +T++ L+DG
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDM---AASVFSDMLDCGLKPNVITYSILMDG 532

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K+ +   A  VF+ M    I     TYN  INGLC  G+  EA  +  + +  G  P 
Sbjct: 533 YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV 592

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            +T N++++GF K+  V  A   + ++ E G+SP+VITY TLI+ +CK    + A  MRN
Sbjct: 593 CLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRN 652

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M ++G+  D++ Y  LI G  ++ ++E    + +EL++ G+    V YN L+       
Sbjct: 653 EMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLN 712

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             + A++L   M     E    ++ TY  LI G  ++G+L  A  L +E+  KG+IP+  
Sbjct: 713 NMEAALNLQKRMLG---EGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769

Query: 509 TYQIVREEMMEKG 521
            Y ++   +  KG
Sbjct: 770 IYTVLINGLCGKG 782



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 217/492 (44%), Gaps = 93/492 (18%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +++ A+ KN+   L     K   D G   S  +   ++ A VK+G   +   +  EM   
Sbjct: 284 IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSC 343

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            +++N+     ++ G CK  KL  A +  + M   G SP  VTY +LI+  CK G + K 
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           Y    ++  M    I P     N+LI GF K E+   A K+F+E  +  IA  + TYNSL
Sbjct: 404 YD---LYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSL 459

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++ LC +GK+ EA  L  +M+  GL P  V+ N++I G C++  ++ A  +F D+ + GL
Sbjct: 460 LSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGL 519

Query: 361 SPSVITYNTLIDAY-----------------------------------CKEGRMEDAFA 385
            P+VITY+ L+D Y                                   CK GR  +A  
Sbjct: 520 KPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQD 579

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M    +++G +P   TYN ++ G  +EG+V        E+  +G+   ++TY  L+   C
Sbjct: 580 MLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+  +  A+ + +EM     E    +I  Y  LI GFC+K  +E A+ L +ELL+ GL P
Sbjct: 640 KNNNTDLALKMRNEMRNKGLEL---DIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696

Query: 506 NQTTYQ----------------------------------------IVRE---------- 515
           N   Y                                         +++E          
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 516 -EMMEKGFIPDI 526
            EM  KG IPDI
Sbjct: 757 SEMSAKGIIPDI 768



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 41/414 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S L    K GK +  +T++  +      L    +  + ++L + +     +    F    
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKM--LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GLK +V++ + L+    K G  E   YV+  M    I  +  ++N  +NGLCK G+ +
Sbjct: 516 DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTS 575

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D+++     G  P  +TYN ++DG+ K+G +     A   +++M E+G+ PN +T+ 
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTA---YREMCESGVSPNVITYT 632

Query: 264 TLI-----------------------------------DGFCKDENISAAMKVFEEMGSH 288
           TLI                                   DGFCK ++I  A  +F E+   
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G++   V YNSLI+G      ++ A+ L+  M+  G+  ++ T   LI+G  K+  +  A
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L+ ++S +G+ P +I Y  LI+  C +G++E+A  +   M    + P+V  YN LIAG
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAG 812

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             + GN++    + NE+++ G+     TY+IL+    K G S    SLL   FK
Sbjct: 813 HFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALK-SLLSLKFK 865



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 17/479 (3%)

Query: 59  ASHSLLLTGRLLHSLVVAKK--YPKIRSFLHMFVKNG---KFTSVSTIFHALSTCSDSLC 113
           +  S+L    ++ +L+  K+  Y  +  F  +    G      S+  + H L+  S++L 
Sbjct: 77  SQDSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLK 136

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAF-KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           +   +++  +      M P++  + F      +   S +   N LL + +K  K  D   
Sbjct: 137 QAQNLLNRFISGDSGPM-PNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIG 195

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
            +  +    I   +   NF+L  L K   + +A ++ E M   GV     T +I++    
Sbjct: 196 CFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANL 255

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K        +A   F +    G+  +   ++ +I  FCK+ ++  A  + ++M   G   
Sbjct: 256 KDNN---EEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVP 312

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
              T+ S+I      G + EA+ L+DEM++ G++ NVV +  L+ G+CK+  +  A   F
Sbjct: 313 SEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFF 372

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D ++E G SP+ +TY  LI+  CK G M  A+ +   M ++ + P V   N LI G  + 
Sbjct: 373 DKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKV 432

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
            + E    + +E V   + A + TYN L+  LCK+GK  +A +L     KM  +   P  
Sbjct: 433 ESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQ---KMLDKGLAPTK 488

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           V+YN +I G C++G L+ A  + +++L+ GL PN  TY I+ +   + G   D E   Y
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNG---DTEYAFY 544


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 222/381 (58%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G   F      G   +V++ N L+ A  K G+ ++   + K M  + ++ NL S+N ++N
Sbjct: 29  GLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIIN 88

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC+ G + +A +I+E+M   G +P  VTYN L++GYCK+   G  ++A  +  +MV NG
Sbjct: 89  GLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE---GNFHQALVIHAEMVRNG 145

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+  LI+  CK  N++ AM+ F++M   G+     TY +LI+G    G L+EA 
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + +EM  SG  P+VVT NA I+G C  + +E+A  +  ++ E+GL+P V++Y+T+I  +
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C++G ++ AF M+  M+++GV PD  TY+ LI GL     +    ++  E+++ G+    
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L+ A C +G   KA+ L DEM     +   P+ VTY+VLI G  ++ +  +A  L
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMI---HKGFLPDAVTYSVLINGLNKQARTREAKRL 382

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           L +L+ +  +P+  TY  + E
Sbjct: 383 LFKLIYEESVPSDVTYDTLIE 403



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 215/367 (58%), Gaps = 6/367 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V + N L+R     G+ +     + EM+R     N+ ++N +++  CK G++++A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M S G+ P +++YN++I+G C++G    M +A  + ++M   G  P+EVT+NTL+
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREG---SMKEAWEILEEMGYKGFTPDEVTYNTLL 122

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+CK+ N   A+ +  EM  +G++  VVTY +LIN +C    L+ A+   D+M   GL+
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN  T   LI+GF ++ L+ +A  + ++++E G SPSV+TYN  I  +C   RME+A  +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+++G+ PDV +Y+ +I+G  R+G ++    +  E+V  G+    VTY+ L+  LC+
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             +  +A  L  EM  M      P+  TY  LI  +C +G L  A  L +E++ KG +P+
Sbjct: 303 MRRLTEACDLSQEMLDMGLP---PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 359

Query: 507 QTTYQIV 513
             TY ++
Sbjct: 360 AVTYSVL 366



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 205/365 (56%), Gaps = 22/365 (6%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R R+  N+ ++N ++ G C  G+L K      +M+  G  P VVTYN LID YCK   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK--- 57

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G++ +A  + K M   G+ PN +++N +I+G C++ ++  A ++ EEMG  G     VT
Sbjct: 58  MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L+NG C +G   +A+ +  EM+ +G+ P+VVT  ALIN  CK + + +A   FD + 
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL P+  TY TLID + ++G + +A+ + N M + G  P V TYN  I G      +E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ E+V  G+   +V+Y+ ++   C+ G+  +A  +  EM  +EK    P+ VTY+
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM--VEKGVS-PDAVTYS 294

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEK 520
            LI+G C+  +L +A  L  E+L+ GL P++ TY                  + +EM+ K
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354

Query: 521 GFIPD 525
           GF+PD
Sbjct: 355 GFLPD 359



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 234/441 (53%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+ AY K  +    F   K     G++ +++S N ++  L +EG  ++   + 
Sbjct: 44  NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 103

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  +    +  ++N +LNG CK G  ++A  I  +M   GVSP VVTY  LI+  CK 
Sbjct: 104 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                + +A   F  M   G+ PNE T+ TLIDGF +   ++ A ++  EM   G +  V
Sbjct: 164 R---NLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+ I+G CV  +++EA+ +  EM+  GL P+VV+ + +I+GFC+K  +++A  +  +
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G+SP  +TY++LI   C+  R+ +A  +   MLD G+ PD  TY  LI     EG+
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    ++ +E+++ G     VTY++L+  L K  ++++A  LL   FK+  E+  P+ VT
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL---FKLIYEESVPSDVT 397

Query: 475 YNV---------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           Y+                LIKGFC KG + +A+ +   ++E+   P +  Y ++      
Sbjct: 398 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 457

Query: 514 ----------REEMMEKGFIP 524
                      +EM+  GF+P
Sbjct: 458 GGNLPKAFNLYKEMIHSGFVP 478



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 204/395 (51%), Gaps = 22/395 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L+ + K G F   + + HA     + +  + +    L+ +  K    +   E F +  
Sbjct: 120 TLLNGYCKEGNFHQ-ALVIHA-EMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL+ +  +   L+    ++G   +   +  EM       ++ ++N  ++G C   ++ 
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++++M   G++P VV+Y+ +I G+C+KG + + ++     ++MVE G+ P+ VT++
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK---QEMVEKGVSPDAVTYS 294

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI G C+   ++ A  + +EM   G+     TY +LIN  CV+G L++A+ L DEM+  
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354

Query: 324 GLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGLSPSVITYNTLID---------- 372
           G  P+ VT + LING  K+    +A R+LF  I E+ + PS +TY+TLI+          
Sbjct: 355 GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSV 413

Query: 373 -----AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
                 +C +G M +A  +  SM++R   P  + YN +I G  R GN+    N+  E+++
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           +G     VT   L+ AL K+G +++   ++ +  +
Sbjct: 474 SGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 508


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 218/379 (57%), Gaps = 10/379 (2%)

Query: 137 EAFKRAGD----YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           EA    GD     G   +V++ N L+ A  + G+ +  E +   M+   +  +L +FN V
Sbjct: 172 EALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NGLCKAG++  A  + ++M   G++P  V+YN L+ GYCK G    +++A AVF +M +
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC---LHEALAVFAEMAQ 288

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++P+ VTF +LI   C+  N+  A+ +  +M   G+     T+ +LI+G C +G LD+
Sbjct: 289 KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDD 348

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+    EM    ++P+VV  N LING+CK   +++AR L  ++  +G+ P V+TY+T++ 
Sbjct: 349 ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILS 408

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G  + AF +   ML +GV+PD  TY+ LI GL  E  +     +  +++  G++ 
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY  L+   CK+G  +KA+SL DEM    K+   P++VTY+VLI G  +  + ++A 
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSLHDEMI---KKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 493 GLLNELLEKGLIPNQTTYQ 511
            LL +L  +  +P+   Y+
Sbjct: 526 RLLFKLYYEDPVPDNIKYE 544



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 220/409 (53%), Gaps = 24/409 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S+L+ N +L AL  +        +   M R  +  N+ ++N ++  LC  G+  +A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 206 SDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             ++ +DM+  G +P VVTYN L+  +C+ G +     A+ +   M E G+ P+ VTFNT
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA---AERLVGVMREGGVRPSLVTFNT 230

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +++G CK   +  A K+F+EM   G+    V+YN+L++G C  G L EA+A+  EM   G
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+VVT  +LI+  C+   +E+A  L   + E+GL  +  T+  LID +C+ G ++DA 
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                M +  + P V  YN LI G  + G ++  R +++E+   GM+  +VTY+ ++   
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A  L     KM K+   P+ +TY+ LI+G C++ +L DA  L  ++L+ GL 
Sbjct: 411 CKIGDTDSAFELNR---KMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISGTS 537
           P++ TY                  + +EM++KG +PD+  +   I G S
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLS 516



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 214/426 (50%), Gaps = 23/426 (5%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             K G+      +F  ++   + L  + +  + L+  Y K    H     F      G+ 
Sbjct: 235 LCKAGRMEDARKMFDEMA--REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             V++   L+ A+ + G  E    +  +M+ R + +N  +F  +++G C+ G L+ A   
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           M++M+   + P VV YN+LI+GYCK   +G+M +A  +  +M   G+ P+ VT++T++ G
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCK---LGRMDEARELIHEMEAKGMKPDVVTYSTILSG 409

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           +CK  +  +A ++  +M   G+    +TY+SLI GLC + +L +A  L ++M+  GL+P+
Sbjct: 410 YCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPD 469

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T   LI+G CK+  V+KA  L D++ ++G+ P V+TY+ LID   K  R ++A  +  
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529

Query: 389 SMLDRGVLPDVSTY----NC-----------LIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            +     +PD   Y    +C           L+ G S +G +     +   +++   +  
Sbjct: 530 KLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLD 589

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
              Y++L+   C+ G   KA+S   ++ +       PN  +   L++G  ++G   +A+ 
Sbjct: 590 GSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS---PNSTSTISLVRGLFEEGMTVEADN 646

Query: 494 LLNELL 499
           ++ ELL
Sbjct: 647 VIQELL 652



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 167/334 (50%), Gaps = 53/334 (15%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL+ +  +   L+    + G  +D     KEM+  RI+ ++  +N ++NG CK G+++
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A +++ +M++ G+ P VVTY+ ++ GYCK   IG    A  + + M++ G++P+ +T++
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCK---IGDTDSAFELNRKMLKKGVVPDAITYS 439

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI G C++  +  A ++FE+M   G+     TY +LI+G C +G + +A++L DEM+  
Sbjct: 440 SLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKK 499

Query: 324 GLKPNVVTSNALINGFCKKKLVEKA-RVLF---------DDISEQGLSPSVIT------- 366
           G+ P+VVT + LI+G  K    ++A R+LF         D+I  + L     T       
Sbjct: 500 GVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVV 559

Query: 367 ---------------------------------YNTLIDAYCKEGRMEDAFAMRNSMLDR 393
                                            Y+ LI  +C+ G +  A +    +L  
Sbjct: 560 ALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC 619

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           G  P+ ++   L+ GL  EG      N++ EL+N
Sbjct: 620 GFSPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 232/454 (51%), Gaps = 7/454 (1%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L   + + + +S +   V      S +++F A+   + + C N  + D LM+AY  +   
Sbjct: 111 LSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSN-FVFDALMIAYWDSGFV 169

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
               + F+   +   +     C  LL  ++       +   Y E+        +  +N +
Sbjct: 170 SDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNIL 229

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +N  CK G +  A  I  +++  G+ P  V++N LI+G CK   + + ++     K M E
Sbjct: 230 INKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK---KTMEE 286

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N I P+  T++ LI G CK+  +  A ++F+EM   G+    +T+ +LI+G     ++D 
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+    +M+  G+KP++V  N L+NG CK   V KAR L D++   G+ P  ITY TLID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLID 406

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCKEG +E A  +R  M + GV+ D   +  LI+G  R+G V      + E+V  GM+ 
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              TY +++   CK G  K    LL EM ++   K  P ++TYNVL+ G C++G++++AN
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHK--PGVITYNVLMNGLCKQGQMKNAN 523

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            LL  +L  G+ P+  TY I+ E   + G   D+
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDL 557



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 200/376 (53%), Gaps = 11/376 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           PK++ +   ++ F K G       IF+ +      L   ++  + L+    K+     GF
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIR--KRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
              K   +  +   V + + L+  L KEG+ +  E ++ EM++R +  N  +F  +++G 
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            ++ +++ A +    M ++GV P +V YN L++G CK   +G + KA  +  +M   G+ 
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK---VGDVNKARKLVDEMKMVGMK 395

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+++T+ TLIDG+CK+ ++ +AM++ + M   G+    V + +LI+G C DG++ +A   
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+ +G+KP+  T   +I+G+CKK  V+    L  ++   G  P VITYN L++  CK
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G+M++A  +  +ML+ GV PD  TYN L+ G  + G  E +  + NE    G+      
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAY 572

Query: 437 YNILVGALCKDGKSKK 452
           Y  LV    K  K ++
Sbjct: 573 YTSLVSEYNKSLKDRQ 588



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 143/287 (49%), Gaps = 19/287 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+D      +       + E+  +G    V  YN LIN  C +G + +A  + +E+   G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P  V+ N LING CK + +++   L   + E  + P V TY+ LI   CKEGR++ A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M  RG+ P+  T+  LI G  R   ++   N  ++++  G++  LV YN L+  L
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G   KA  L+DEM KM   K  P+ +TY  LI G+C++G LE A  +   + E+G++
Sbjct: 374 CKVGDVNKARKLVDEM-KMVGMK--PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 505 PNQTTYQI----------VRE------EMMEKGFIPDIEGHMYNISG 535
            +   +            VR+      EM+E G  PD   +   I G
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/400 (34%), Positives = 213/400 (53%), Gaps = 35/400 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++   L+   VK+        V +EM  R+I+LN  ++  +++GLCK G L KA
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY------------------------ 241
            D+  +M  +G+ P + TYN LI+GY K   + K Y                        
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451

Query: 242 --------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                   +A+ +F++M+  G+ PN V + T++ G  K+     A+K+   M   G++  
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V  YN++I G C  GK++E  +   EM+A GLKPNV T  A I+G+C+   ++ A   F 
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ + G++P+ +    LID YCK+G    AFA    MLD+GVLPDV T++ LI GLS+ G
Sbjct: 572 EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    + +EL++ G+   + TY  L+  LCK+G  K A  L D+M K       PNIV
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN---PNIV 688

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           TYN LI G C+ G++  A  L + + EKGL  N  TY  +
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/440 (33%), Positives = 224/440 (50%), Gaps = 58/440 (13%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+    +GLK +++    +++ LVKEG+FE+   +   MK + +  ++  +N V+ G 
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CKAGK+ +    + +M + G+ P V TY   I GYC+ G   +M  A+  F +M+++GI 
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAG---EMQAAERSFIEMLDSGIA 579

Query: 257 PNEVTFNTLIDGFCKDEN-----------------------------------ISAAMKV 281
           PN+V    LIDG+CKD N                                   +  AM V
Sbjct: 580 PNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGV 639

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F E+   G+   V TY SLI+ LC +G L  A  L D+M   G+ PN+VT NALING CK
Sbjct: 640 FSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              + KAR LFD I E+GL+ + +TY+T+I  YCK   + +AF + + M   GV PD   
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI G  + GN E   ++   +V  G+ A    +N L+    K GK  +A  L+++M 
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMV 818

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--------QIV 513
                   PN VTY +LI+  C  G +++A  L  E+ ++ ++PN  TY        +I 
Sbjct: 819 DNHIT---PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875

Query: 514 R--------EEMMEKGFIPD 525
           R        +EM+ +G  PD
Sbjct: 876 RRSEMFSLFDEMVARGIKPD 895



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 279/602 (46%), Gaps = 81/602 (13%)

Query: 4   SANSTIEDITELIRNHHW------SKLKNT-DPNTVILQL-FNSDADPVLILRYFCWSTK 55
            +++T+++IT L++  +W      S L N  +P+ V L +  N   DP  +  +F W   
Sbjct: 40  QSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNS 99

Query: 56  ELRASH--------SLLL--------TGRLLHSLV------------VAKKYPKIRS--- 84
               S         SL+L           +L  ++            + K Y +I     
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSS 159

Query: 85  ---------FLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKP 132
                     + ++ K G      ++F    T        C NS+  D+L     K  + 
Sbjct: 160 SSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLL-----KGNRV 214

Query: 133 HLGFEAFKRAGDYG-LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
            L ++ +K  G  G +   V +   L+ A  + GK E+ ++V  +M+ +    NL +++ 
Sbjct: 215 ELFWKVYK--GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSV 272

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           V+ GLC+AG +++A ++   M + G+ P    Y  LIDG+C++    +  +  ++  +M 
Sbjct: 273 VIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQ---KRSTEGKSMLDEMY 329

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
             G+ P+ V +  LI+GF K  +I  A +V EEM +  I     TY +LI+GLC  G L+
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  L  EM   G+KP++ T N LI G+ K + +EKA  L  +I ++ L+ +      ++
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  C  G +  A  +   M+  G+ P++  Y  ++ GL +EG  E    I+  + + G+ 
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +  YN ++   CK GK ++  S L EM  + K  K PN+ TY   I G+C+ G+++ A
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEM--IAKGLK-PNVYTYGAFIHGYCRAGEMQAA 566

Query: 492 NGLLNELLEKGLIPN---------------QTTYQIVREE-MMEKGFIPDIEGHMYNISG 535
                E+L+ G+ PN                TT    +   M+++G +PD++ H   I G
Sbjct: 567 ERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626

Query: 536 TS 537
            S
Sbjct: 627 LS 628



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 232/477 (48%), Gaps = 78/477 (16%)

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG-LKSSVLSCNQLLRALVKEGKFEDVE 171
           C NS+  D+L     K  +  L ++ +K  G  G +   V +   L+ A  + GK E+ +
Sbjct: 200 CCNSLSKDLL-----KGNRVELFWKVYK--GMLGAIVPDVYTYTNLINAYCRVGKVEEGK 252

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI----------------------- 208
           +V  +M+ +    NL +++ V+ GLC+AG +++A ++                       
Sbjct: 253 HVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGF 312

Query: 209 ------------MEDMKSLGVSPKVVTYNILIDGYCKK---GG----------------- 236
                       +++M ++G+ P  V Y  LI+G+ K+   GG                 
Sbjct: 313 CRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNT 372

Query: 237 ------------IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                       IG + KA+ +F +M   GI P+  T+N LI+G+ K +N+  A ++  E
Sbjct: 373 FTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIE 432

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           +    + A      +++NGLC  G L  A  L  EM++ GLKPN+V    ++ G  K+  
Sbjct: 433 IKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR 492

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            E+A  +   + +QGLSP V  YNT+I  +CK G+ME+  +    M+ +G+ P+V TY  
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            I G  R G ++       E++++G+    V    L+   CKDG + KA +    M    
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD-- 610

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +   P++ T++VLI G  + GKL++A G+ +ELL+KGL+P+  TY  +   + ++G
Sbjct: 611 -QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 226/454 (49%), Gaps = 42/454 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+H + + G+  +    F  +      +  N +I   L+  Y K+      F  F+   
Sbjct: 552 AFIHGYCRAGEMQAAERSF--IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+   V + + L+  L K GK ++   V+ E+  + +  ++ ++  +++ LCK G L 
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ +DM   G++P +VTYN LI+G CK   +G++ KA  +F  + E G+  N VT++
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCK---LGEIAKARELFDGIPEKGLARNSVTYS 726

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------------------ 305
           T+I G+CK  N++ A ++F  M   G+      Y +LI+G C                  
Sbjct: 727 TIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE 786

Query: 306 -----------VDG-----KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                      +DG     KL EA  L ++M+ + + PN VT   LI   C    +++A 
Sbjct: 787 GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF ++ ++ + P+V+TY +L+  Y + GR  + F++ + M+ RG+ PD   ++ ++   
Sbjct: 847 QLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAH 906

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +EGN      +++++++ G+      Y IL+ ALCK     + + +LDE   +EK+   
Sbjct: 907 LKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDE---VEKQGSK 963

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            ++ T   L+  F + G+ ++A  +L  ++   L
Sbjct: 964 LSLATCGTLVCCFHRAGRTDEALRVLESMVRSFL 997


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 230/405 (56%), Gaps = 22/405 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      +   V S N L+    + G+ E+    YKEM++R +  ++ SF+ ++   
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
              GK++ A+  + +MK LG+ P  V Y ++I G+C+ G    M +A  V  +MV  G L
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAG---SMSEALRVRDEMVGLGCL 364

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VT+NTL++G CK   +  A ++  EM   G+   + T+ +LI+G C DG  ++A+ L
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D ++   L+P+VV  N+LI+G C+K  + KA  L+DD+  + + P+ +TY+ LID++C+
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G++E+AF   + M+ +G LP++ TYN +I G  R GNV+  +  + +++ + +   L+T
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +N L+    K+     A ++ +    MEKE   P+ VTYN++I GF ++G +E+A  +  
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFN---IMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           ++   G+ P++ TY                  + +EMM +GF PD
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 224/411 (54%), Gaps = 22/411 (5%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           PHL  EA++       + +  + N ++ +  K  +F+  + V  EM++R +  ++ + N 
Sbjct: 138 PHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++   +AG ++ A  +++ M + G+ P +VT+N ++ G CK     +  KA  VF+ M 
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHR---RFDKAKEVFRAMD 254

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +  + P+  +FN LI GFC+   +  AMK ++EM   G+   VV+++ LI      GK+D
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A A   EM   GL P+ V    +I GFC+   + +A  + D++   G  P V+TYNTL+
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  CK+ R+ DA  + N M +RGV PD+ T+  LI G  R+GN E    + + L++  +R
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +V YN L+  +C+ G   KA  L D+M   E    +PN VTY++LI   C+KG++E+A
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHARE---IFPNHVTYSILIDSHCEKGQVEEA 491

Query: 492 NGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
            G L+E++ KG +PN  TY                Q   ++MM+   +PD+
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDL 542



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    ++ LI  Y +  +  +AF     +LD  V    S  N L+A LSR G       
Sbjct: 84  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
               ++++       T NI+V + CK  +  KA +++ E   MEK   +P++VT+NVLI 
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISE---MEKRCVFPDVVTHNVLID 200

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              + G ++ A  L++ +  KGL P   T+  V
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSV 233



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ N L+   +KE        V+  M++  ++ +  ++N ++NG  + G + +A  + +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
            M + G+ P   TY  LI+G+   G   + ++   +  +M+  G  P++
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ---LHDEMMHRGFAPDD 647



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/111 (21%), Positives = 51/111 (45%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
            D++  + I  + L+  Y+K    H  F  F       ++   ++ N ++    ++G  E
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           +   V+K+M    IE +  ++  ++NG   AG   +A  + ++M   G +P
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 220/377 (58%), Gaps = 6/377 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +G   F      G   +V++ N ++ A  K  K  +   + + M  + +  NL S+N V+
Sbjct: 221 MGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLC+ G++ + S+I+E+M      P  VT+N LI+GYC    +G  ++A  +  +MV+N
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC---NVGNFHQALVLHAEMVKN 337

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ PN VT+ TLI+  CK  N++ AM+  ++M   G+     TY +LI+G    G L +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             +  EM+ +G  P ++T NALING C    +E A  L  ++ E+G  P V++Y+T+I  
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +C+   +E AF ++  M+ +G+ PDV+TY+ LI GL ++  +  V ++  E+++ G+   
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            VTY  L+ A C +G   KA+ L DEM    ++   P+IVTYNVLI GF ++ + ++A  
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMI---QKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 494 LLNELLEKGLIPNQTTY 510
           LL +LL +  +PN+ TY
Sbjct: 575 LLLKLLYEESVPNEITY 591



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 253/517 (48%), Gaps = 25/517 (4%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L  S  D  L+L++  W+  +     S       LH L   K Y   +S     V N   
Sbjct: 54  LLKSQFDSSLVLKFLDWARSQ--QFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVD 111

Query: 96  TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
            +   +F  L         +S + D+++ +  +    +        A  YG    VLS N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 156 QLLRALVKEGKFEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            +L A+++  +   + E ++KEM    +  N+ ++N ++ G C AG L        +M+ 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER 231

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P VVTYN +ID YCK   IG+ +K   + + M   G+ PN +++N +I+G C++  
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFK---LLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +    ++ EEM         VT+N+LING C  G   +A+ L  EM+ +GL PNVVT   
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LIN  CK   + +A    D + ++GL P+  TY TLID + ++G ++ A+ +   M++ G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P + TYN LI G    G +E    ++ E++  G    +V+Y+ ++   C++ + +KA 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
            L  EM     +   P++ TY+ LI+G C++ +L +   L  E+L  GL P++ TY    
Sbjct: 469 QLKVEMV---AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 513 --------------VREEMMEKGFIPDIEGHMYNISG 535
                         + +EM++KGF PDI  +   I+G
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLING 562



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 233/441 (52%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + ++ AY K  K    F+  +     GL  +++S N ++  L +EG+ ++   + 
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM +RR   +  +FN ++NG C  G  ++A  +  +M   G+SP VVTY  LI+  CK 
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A      M + G+ PN  T+ TLIDGF +   +  A ++ +EM  +G    +
Sbjct: 357 GNLN---RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LING C+ G++++A  L  EM+  G  P+VV+ + +I+GFC+ + +EKA  L  +
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+SP V TY++LI   CK+ R+ +   +   ML  G+ PD  TY  LI     EG+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    + +E++  G    +VTYN+L+    K  ++K+A  LL    K+  E+  PN +T
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL---LKLLYEESVPNEIT 590

Query: 475 YNVLI---------------KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           YN LI               KGFC KG + +A+ +L  +L+KG   N+  Y ++      
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 514 ----------REEMMEKGFIP 524
                      +EM+  GF P
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAP 671



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 193/386 (50%), Gaps = 21/386 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   +  D GL  +  +   L+    ++G  +    + KEM        + ++N ++N
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G++  AS ++++M   G  P VV+Y+ +I G+C+   + K ++      +MV  G
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV---EMVAKG 478

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+  T+++LI G CK   +     +F+EM S G+    VTY SLIN  C++G LD+A+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID-- 372
            L DEM+  G  P++VT N LINGF K+   ++A+ L   +  +   P+ ITYNTLID  
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 373 -------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                         +C +G M +A  +  SML +G   +   YN +I G S+ GN+E   
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           N+  E++++G     VT   L  +L  +GK  +   LLD      K  +        VLI
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL---KSCRITEAALAKVLI 715

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIP 505
               ++G ++    +L ++   GL+P
Sbjct: 716 GINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 220/377 (58%), Gaps = 6/377 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +G   F      G   +V++ N ++ A  K  K  +   + + M  + +  NL S+N V+
Sbjct: 221 MGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLC+ G++ + S+I+E+M      P  VT+N LI+GYC    +G  ++A  +  +MV+N
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC---NVGNFHQALVLHAEMVKN 337

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ PN VT+ TLI+  CK  N++ AM+  ++M   G+     TY +LI+G    G L +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             +  EM+ +G  P ++T NALING C    +E A  L  ++ E+G  P V++Y+T+I  
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +C+   +E AF ++  M+ +G+ PDV+TY+ LI GL ++  +  V ++  E+++ G+   
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            VTY  L+ A C +G   KA+ L DEM    ++   P+IVTYNVLI GF ++ + ++A  
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMI---QKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 494 LLNELLEKGLIPNQTTY 510
           LL +LL +  +PN+ TY
Sbjct: 575 LLLKLLYEESVPNEITY 591



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 253/517 (48%), Gaps = 25/517 (4%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L  S  D  L+L++  W+  +     S       LH L   K Y   +S     V N   
Sbjct: 54  LLKSQFDSSLVLKFLDWARSQ--QFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVD 111

Query: 96  TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
            +   +F  L         +S + D+++ +  +    +        A  YG    VLS N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 156 QLLRALVKEGKFEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            +L A+++  +   + E ++KEM    +  N+ ++N ++ G C AG L        +M+ 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER 231

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P VVTYN +ID YCK   IG+ +K   + + M   G+ PN +++N +I+G C++  
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFK---LLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +    ++ EEM         VT+N+LING C  G   +A+ L  EM+ +GL PNVVT   
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LIN  CK   + +A    D + ++GL P+  TY TLID + ++G ++ A+ +   M++ G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P + TYN LI G    G +E    ++ E++  G    +V+Y+ ++   C++ + +KA 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
            L  EM     +   P++ TY+ LI+G C++ +L +   L  E+L  GL P++ TY    
Sbjct: 469 QLKVEMV---AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 513 --------------VREEMMEKGFIPDIEGHMYNISG 535
                         + +EM++KGF PDI  +   I+G
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLING 562



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 233/441 (52%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + ++ AY K  K    F+  +     GL  +++S N ++  L +EG+ ++   + 
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM +RR   +  +FN ++NG C  G  ++A  +  +M   G+SP VVTY  LI+  CK 
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A      M + G+ PN  T+ TLIDGF +   +  A ++ +EM  +G    +
Sbjct: 357 GNLN---RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LING C+ G++++A  L  EM+  G  P+VV+ + +I+GFC+ + +EKA  L  +
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+SP V TY++LI   CK+ R+ +   +   ML  G+ PD  TY  LI     EG+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    + +E++  G    +VTYN+L+    K  ++K+A  LL    K+  E+  PN +T
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL---LKLLYEESVPNEIT 590

Query: 475 YNVLI---------------KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           YN LI               KGFC KG + +A+ +L  +L+KG   N+  Y ++      
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 514 ----------REEMMEKGFIP 524
                      +EM+  GF P
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAP 671



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 193/386 (50%), Gaps = 21/386 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   +  D GL  +  +   L+    ++G  +    + KEM        + ++N ++N
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G++  AS ++++M   G  P VV+Y+ +I G+C+   + K ++      +MV  G
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV---EMVAKG 478

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+  T+++LI G CK   +     +F+EM S G+    VTY SLIN  C++G LD+A+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID-- 372
            L DEM+  G  P++VT N LINGF K+   ++A+ L   +  +   P+ ITYNTLID  
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 373 -------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                         +C +G M +A  +  SML +G   +   YN +I G S+ GN+E   
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           N+  E++++G     VT   L  +L  +GK  +   LLD      K  +        VLI
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL---KSCRITEAALAKVLI 715

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIP 505
               ++G ++    +L ++   GL+P
Sbjct: 716 GINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 168/541 (31%), Positives = 263/541 (48%), Gaps = 36/541 (6%)

Query: 8   TIEDITELIRNHHWSKLKN-TD---PNTVILQLFNSDADPVLILRYFCWSTKELRASHSL 63
           T E + E I++  W  +++ TD   P+ V   L +    P L   +   +  +LR    L
Sbjct: 47  TSEVLLESIKSSQWHFIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFV--NHIDLRC---L 101

Query: 64  LLTGRLLHSLVVAK-KYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDM 121
               + L   VV+K   PK  + L   V + +  SV  +F  L    D L  +++I+ D 
Sbjct: 102 DFQTQCLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDF 161

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++  Y +        E F    + G      +CN +L  L +  + E+    Y +M R  
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME 221

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I+ N+ +FN ++N LCK GKL KA   +  M+S G+ P +VTYN L+ GY  +   G++ 
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR---GRIE 278

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +  +M   G  P+  T+N ++   C   N   A +V  EM   G+    V+YN LI
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMC---NEGRASEVLREMKGIGLVPDSVSYNILI 335

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G   +G L+ A A RDEM+  G+ P   T N LI+G   +  +E A +L  +I E+G+ 
Sbjct: 336 RGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              +TYN +I+ YC+ G  + AFA+ + M+  G+ P   TY  LI  L R         +
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             ++V  GM+  LV  N L+   C  G   +A SLL EM +M  +   P+ VTYN L++G
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNID---PDDVTYNCLMRG 512

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPD 525
            C +GK E+A  L+ E+  +G+ P+  +Y                 IVR+EM+  GF P 
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572

Query: 526 I 526
           +
Sbjct: 573 L 573



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 205/373 (54%), Gaps = 9/373 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+K ++++ N L++     G+ E    +  EMK +  + +L ++N +L+ +C  G+   
Sbjct: 255 FGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR--- 311

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           AS+++ +MK +G+ P  V+YNILI G C   G   +  A A   +MV+ G++P   T+NT
Sbjct: 312 ASEVLREMKGIGLVPDSVSYNILIRG-CSNNG--DLETAFAYRDEMVKQGMVPTFYTYNT 368

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G   +  I AA  +  E+   GI    VTYN +ING C  G   +A AL DEMM  G
Sbjct: 369 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDG 428

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +KP   T  +LI   C++    +A  LF+ +  +G+ P ++  NTL+D +C  G M+ AF
Sbjct: 429 IKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAF 488

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++   M    + PD  TYNCL+ GL  EG  E  R +M E+   G++   ++YN L+   
Sbjct: 489 SLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 548

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G +K A  + DEM  +      P ++TYN L+KG  +    E A  LL E+  +G++
Sbjct: 549 SKKGDTKHAFIVRDEMLSLGFN---PTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605

Query: 505 PNQTTYQIVREEM 517
           PN +++  V E M
Sbjct: 606 PNDSSFCSVIEAM 618



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 162/310 (52%), Gaps = 3/310 (0%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +     GL    +S N L+R     G  E       EM ++ +     ++N +++GL
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
               K+  A  ++ +++  G+    VTYNI+I+GYC+ G   K +   A+  +M+ +GI 
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF---ALHDEMMTDGIK 430

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P + T+ +LI   C+      A ++FE++   G+   +V  N+L++G C  G +D A +L
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM    + P+ VT N L+ G C +   E+AR L  ++  +G+ P  I+YNTLI  Y K
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G  + AF +R+ ML  G  P + TYN L+ GLS+  + E    ++ E+ + G+     +
Sbjct: 551 KGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSS 610

Query: 437 YNILVGALCK 446
           +  ++ A+ K
Sbjct: 611 FCSVIEAMSK 620



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 147/269 (54%), Gaps = 3/269 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  + N L+  L  E K E  E + +E++ + I L+  ++N V+NG C+ G   KA
Sbjct: 358 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKA 417

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M + G+ P   TY  LI   C++    K  +AD +F+ +V  G+ P+ V  NTL
Sbjct: 418 FALHDEMMTDGIKPTQFTYTSLIYVLCRRN---KTREADELFEKVVGKGMKPDLVMMNTL 474

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG C   N+  A  + +EM    I    VTYN L+ GLC +GK +EA  L  EM   G+
Sbjct: 475 MDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 534

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+ ++ N LI+G+ KK   + A ++ D++   G +P+++TYN L+    K    E A  
Sbjct: 535 KPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEE 594

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   M   G++P+ S++  +I  +S+  N
Sbjct: 595 LLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 24/257 (9%)

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             + ++ ++   C    +DEA+     M   G  P   T N +++   +   +E A V +
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+    +  +V T+N +I+  CKEG+++ A      M   G+ P + TYN L+ G S  
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G +EG R I++E+ + G +  L TYN ++  +C +G++ + +       +M+     P+ 
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR------EMKGIGLVPDS 328

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREE 516
           V+YN+LI+G    G LE A    +E++++G++P   TY                +I+  E
Sbjct: 329 VSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 388

Query: 517 MMEKGFIPDIEGHMYNI 533
           + EKG + D     YNI
Sbjct: 389 IREKGIVLD--SVTYNI 403



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           ++++ LM  +         F   K      +    ++ N L+R L  EGKFE+   +  E
Sbjct: 469 VMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGE 528

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           MKRR I+ +  S+N +++G  K G    A  + ++M SLG +P ++TYN L+ G  K   
Sbjct: 529 MKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQD 588

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++  A+ + ++M   GI+PN+ +F ++I+   K +N
Sbjct: 589 -GEL--AEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 213/377 (56%), Gaps = 6/377 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           + +  +V S N L+  L +    +    V  +M +  I  +  +FN ++NGLC  GK+ +
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++  +M   G  P V++Y  +I+G CK G       A  VFK M +NG  PN VT++T
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSM---AVDVFKKMEQNGCKPNVVTYST 238

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CKD  ++ AM+   EM   GI   V TYNS+++G C  G+L+EA  L  EM+   
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PN VT   L++G CK+ +V +AR++F+ ++E+G+ P + TYN L+D YC +  M +A 
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M+ +G  P   +YN LI G  +   ++  ++++ E+ +  +    VTY+ L+  L
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G+ K+A++L  EM         PN+VTY +L+ GFC+ G L++A  LL  + EK L 
Sbjct: 419 CQLGRPKEALNLFKEMCSY---GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLE 475

Query: 505 PNQTTYQIVREEMMEKG 521
           PN   Y I+ E M   G
Sbjct: 476 PNIVHYTILIEGMFIAG 492



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ N L+  L  EGK ++   ++ EM +R  E N+ S+  V+NGLCK G  + A
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMA 217

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+ + M+  G  P VVTY+ +ID  CK   +     A     +MVE GI PN  T+N++
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN---DAMEFLSEMVERGIPPNVFTYNSI 274

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GFC    ++ A ++F+EM    +    VT+  L++GLC +G + EA  + + M   G+
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P++ T NAL++G+C ++L+ +A+ +F+ +  +G +P   +YN LI+ YCK  RM++A +
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKS 394

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + + PD  TY+ L+ GL + G  +   N+  E+ + G    LVTY IL+   C
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G   +A+ LL  M    KEKK  PNIV Y +LI+G    GKLE A  L ++L   G  
Sbjct: 455 KHGHLDEALKLLKSM----KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 505 PNQTTYQIVREEMMEKG 521
           P+  TY ++ + ++++G
Sbjct: 511 PDIRTYTVMIKGLLKEG 527



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 213/380 (56%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  + FK+    G K +V++ + ++ +L K+    D      EM  R I  N+ ++N ++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C  G+LN+A+ + ++M    V P  VT+ IL+DG CK+G + +   A  VF+ M E 
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE---ARLVFETMTEK 332

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+  T+N L+DG+C    ++ A KVFE M   G A G  +YN LING C   ++DEA
Sbjct: 333 GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEA 392

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +L  EM    L P+ VT + L+ G C+    ++A  LF ++   G  P+++TY  L+D 
Sbjct: 393 KSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDG 452

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CK G +++A  +  SM ++ + P++  Y  LI G+   G +E  + + ++L  +G R  
Sbjct: 453 FCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPD 512

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TY +++  L K+G S +A  L     KME +   PN  +YNV+I+GF Q      A  
Sbjct: 513 IRTYTVMIKGLLKEGLSDEAYDLFR---KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L++E++ K    N +T+Q++
Sbjct: 570 LIDEMVGKRFSVNLSTFQML 589



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 173/374 (46%), Gaps = 46/374 (12%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLC++ ++ D +              E      + G+  +V + N ++      G
Sbjct: 237 STIIDSLCKDRLVNDAM--------------EFLSEMVERGIPPNVFTYNSIVHGFCNLG 282

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +  +   ++KEM  R +  N  +F  +++GLCK G +++A  + E M   GV P + TYN
Sbjct: 283 QLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYN 342

Query: 226 ILIDGYC----------------KKGGIG----------------KMYKADAVFKDMVEN 253
            L+DGYC                +KG                   +M +A ++  +M   
Sbjct: 343 ALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHK 402

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            + P+ VT++TL+ G C+      A+ +F+EM S+G    +VTY  L++G C  G LDEA
Sbjct: 403 ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEA 462

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L   M    L+PN+V    LI G      +E A+ LF  +   G  P + TY  +I  
Sbjct: 463 LKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG 522

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             KEG  ++A+ +   M D G LP+  +YN +I G  +  +      +++E+V       
Sbjct: 523 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVN 582

Query: 434 LVTYNILVGALCKD 447
           L T+ +L+    +D
Sbjct: 583 LSTFQMLLDLESQD 596



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 21/307 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A F  MV     P+ V F   +  F K +  S  + +  +M    +   V + N LIN
Sbjct: 77  ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILIN 136

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC    +D +V++  +M   G+ P+ +T NALING C +  +++A  LF+++ ++G  P
Sbjct: 137 CLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEP 196

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+Y T+I+  CK G    A  +   M   G  P+V TY+ +I  L ++  V      +
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL 256

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+V  G+   + TYN +V   C  G+  +A  L  EM   +     PN VT+ +L+ G 
Sbjct: 257 SEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD---VMPNTVTFTILVDGL 313

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           C++G + +A  +   + EKG+ P+ +TY                  V E M+ KG  P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG- 372

Query: 527 EGHMYNI 533
             H YNI
Sbjct: 373 -AHSYNI 378



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 23/283 (8%)

Query: 267 DGFCKDEN----ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           DGF  + +    +  A+  F  M        VV +   +       +    V+L ++M  
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             +  NV + N LIN  C+   V+ +  +   + + G+ P  IT+N LI+  C EG++++
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N M+ RG  P+V +Y  +I GL + GN     ++  ++  NG +  +VTY+ ++ 
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +LCKD     A+  L EM    +    PN+ TYN ++ GFC  G+L +A  L  E++ + 
Sbjct: 242 SLCKDRLVNDAMEFLSEMV---ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 503 LIPNQTTYQI----------------VREEMMEKGFIPDIEGH 529
           ++PN  T+ I                V E M EKG  PDI  +
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTY 341


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 187/647 (28%), Positives = 298/647 (46%), Gaps = 136/647 (21%)

Query: 8   TIEDITELIRNHHWSKLK---------NTD-PNTVILQLFNSDADPVLILRYFCWSTKEL 57
           ++ +IT L+ +H+W  L          NTD   +VILQ  N   DP  +L +F WS  ++
Sbjct: 35  SVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ--NQVGDPKRLLNFFYWSQHKM 92

Query: 58  ---RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKN--GKFTSVSTIFHALSTCSDSL 112
               A   L +   L  +L  +  Y      +   ++N       + +I     +C+ S 
Sbjct: 93  GTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGS- 151

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
             NS+I DMLM +Y K     +GF       F    ++  + S+LSCN LL  L+K  K 
Sbjct: 152 -PNSVIFDMLMDSYRK-----MGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 205

Query: 168 E----------------DVEYVY-------------KEMKRRRIEL-------------- 184
           E                DV Y Y             K+ KR  +E+              
Sbjct: 206 ELFWKVFDGMCAHKVLPDV-YTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELK 264

Query: 185 ----------NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
                     +L +++ ++NG C   +  +A  ++ +M  +G+ P+ +TYN LIDG+ ++
Sbjct: 265 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 324

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G I                                GKM KA  + ++M+E G+ P+  T+
Sbjct: 325 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 384

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           + LI+G C+ +N++ A ++ +EM    +A  V+TY+ +INGLC  G L    A+  EM+ 
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 444

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +GLKPN V    L+    K+  VE++R++ + + EQG+ P V  YN+LI  +CK  RME+
Sbjct: 445 NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEE 504

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      ML+R + P+  TY   I G S+ G +E      NE+++ G+   +  Y  L+ 
Sbjct: 505 ARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 564

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             CK+G   +A S+   +      +   ++ TY+VLI G  + GK+ +A G+ +EL EKG
Sbjct: 565 GHCKEGNVTEAFSVFRFIL---SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621

Query: 503 LIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
           L+PN  TY                  + EEM  KG  PDI    YNI
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV--TYNI 666



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 223/414 (53%), Gaps = 28/414 (6%)

Query: 97  SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQ 156
           + S I + L  C +    N+I+ +M+M                      GLK + +    
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVM---------------------NGLKPNAVVYTT 456

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  KEG+ E+   + + M+ + I  ++  +N ++ G CKA ++ +A   + +M    
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P   TY   IDGY K G   +M  AD  F +M+  G+LPN   +  LI+G CK+ N++
Sbjct: 517 LRPNAHTYGAFIDGYSKAG---EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  VF  + S  +   V TY+ LI+GL  +GK+ EA  +  E+   GL PN  T N+LI
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK+  V+KA  L +++  +G++P ++TYN LID  CK G +E A  + + +  RG+ 
Sbjct: 634 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 693

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TY  ++ G  +  N      ++ E++  G+      YN+++   CK+ K +KA+ L
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 753

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             EM     EK + + V++N LI+G+C+ GKL++AN LL E++EK  IPN  TY
Sbjct: 754 FQEML----EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 217/393 (55%), Gaps = 13/393 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GLK   ++ N L+   +++G  E    +  EM    IE NL  +N +LNG+CKAGK+ 
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 363

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA +IM++M   GV P   TY++LI+G+C+   + + ++   +  +M +  + P  +T++
Sbjct: 364 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE---LLDEMKKRKLAPTVLTYS 420

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+G C+  N+     +  EM  +G+    V Y +L+     +G+++E+  + + M   
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+V   N+LI GFCK K +E+AR    ++ E+ L P+  TY   ID Y K G ME A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
               N ML  GVLP+V  Y  LI G  +EGNV    ++   +++  +   + TY++L+  
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L ++GK  +A  +  E+   +++   PN  TYN LI G C++G ++ A+ LL E+  KG+
Sbjct: 601 LSRNGKMHEAFGIFSEL---QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 504 IPNQTTYQIVREEMMEKGFIP-------DIEGH 529
            P+  TY I+ + + + G I        DIEG 
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 690



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 36/439 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+++   LM A+ K  +        +R  + G+   V   N L+    K  + E+     
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  RR+  N  ++   ++G  KAG++  A     +M S GV P V  Y  LI+G+CK+
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + + +   +VF+ ++   +L +  T++ LI G  ++  +  A  +F E+   G+    
Sbjct: 570 GNVTEAF---SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSLI+G C  G +D+A  L +EM   G+ P++VT N LI+G CK   +E+A+ LFDD
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I  +GL+P+ +TY  ++D YCK      AF +   ML RGV PD   YN ++    +E  
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------- 460
            E   ++  E++  G  A  V++N L+   CK GK ++A  LL+EM              
Sbjct: 747 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 461 ------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                              +M++    P   TY  L+ G+   G + + + L  E++ KG
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865

Query: 503 LIPNQTTYQIVREEMMEKG 521
           + P++ TY ++ +    +G
Sbjct: 866 IEPDKMTYYVMIDAYCREG 884



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 211/415 (50%), Gaps = 17/415 (4%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G  T   ++F  +   S  + ++     +L+    +N K H  F  F    + GL  +
Sbjct: 568 KEGNVTEAFSVFRFI--LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             + N L+    K+G  +    + +EM  + I  ++ ++N +++GLCKAG++ +A ++ +
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 685

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D++  G++P  VTY  ++DGYCK       ++   + ++M+  G+ P+   +N +++  C
Sbjct: 686 DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ---LLEEMLLRGVPPDAFIYNVILNFCC 742

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+E    A+ +F+EM   G A+  V++N+LI G C  GKL EA  L +EM+     PN V
Sbjct: 743 KEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T  +LI+  CK  ++ +A+ L+ ++ E+ + P+  TY +L+  Y   G M +  A+   M
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM------RAGLVTYNILVGAL 444
           + +G+ PD  TY  +I    REGNV     + +E++  GM      R GL T +++    
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGF 921

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
              G   +A  +L  M K      W  N  +   L+ G       ED++ LL ++
Sbjct: 922 QIAGNMDEAAEVLRSMVKF----GWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 256/527 (48%), Gaps = 75/527 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H  V +++    ++ +   ++    + V  +   +S+   +   N+++ D+L+  YV+
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K   G EAF+     G   S+ +CN LL  LVK    E    V++E+ R  IELN+ +
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------- 237
            N ++N LCK GK +     + +M+  G+   +VTYN LI  YC++G +           
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G+  +A  +  +M+  G+ P+  T+NTL+   C+ +N S
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFS 240

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLI----------------------------------- 301
            A ++F EM   G+   +V+++SLI                                   
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C +G + EA+ +RDEM+  G   +V+  N ++NG CK+K++  A  LFD++ E+G  
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 360

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   T+ TLI  +C++G M  A ++  +M  R + PD+  YN LI G  + G +E    +
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            + +++  +    +TY IL+ A C  G   +A  L D M  +EK  K P +VT N +IKG
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM--IEKGIK-PTLVTCNTVIKG 477

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKGFI 523
           +C+ G    A+  L  ++ KG+ P+  +Y       VRE+ M+K F+
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFL 524



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 250/486 (51%), Gaps = 59/486 (12%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K+GKF  V +    +    + +  + +  + L+ AY +       FE      D GLK S
Sbjct: 130 KDGKFDDVKSFLSEME--GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPS 187

Query: 151 VLSCNQLLRALVKEGK-----------------------------------FEDVEYVYK 175
           + + N ++  L K+G+                                   F + + ++ 
Sbjct: 188 LFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFG 247

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM R+ +  +L SF+ ++    +   L++A     DMK  G+ P  V Y +L+ GYC+ G
Sbjct: 248 EMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNG 307

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
               M +A  +  +M+E G + + + +NT+++G CK++ ++ A K+F+EM   G      
Sbjct: 308 ---NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           T+ +LI+G C DG + +A++L   M    +KP++V  N LI+GFCK   +EKA  L+D +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             + + P+ ITY  LI+AYC  G + +AF + + M+++G+ P + T N +I G  R G+ 
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                 +  ++  G+    ++YN L+    ++    KA   ++   KMEKE   P+I+TY
Sbjct: 485 SKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN---KMEKEGLLPDIITY 541

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMME 519
           NV++ GFC++G++++A  +L +++EKG+ P+++TY  +                 +EM++
Sbjct: 542 NVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601

Query: 520 KGFIPD 525
           +GF PD
Sbjct: 602 RGFAPD 607



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           ++ G+ ++   +A+   M  N    N + F+ LI  + +   +    + F  + S G   
Sbjct: 23  RRSGVSRVEVVEALVSSMCGN-CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLV 81

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            +   NSL+ GL     ++ A  +  E++ SG++ NV T N ++N  CK    +  +   
Sbjct: 82  SINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFL 141

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++   G+   ++TYNTLI AYC+EG +E+AF + NSM D+G+ P + TYN +I GL ++
Sbjct: 142 SEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKK 201

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G     + I+ E++N G+     TYN L+   C+     +A  +  EM    ++   P++
Sbjct: 202 GRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEML---RQGVVPDL 258

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREE 516
           V+++ LI  F +   L+ A     ++ + GL+P+   Y +                +R+E
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318

Query: 517 MMEKGFIPDI 526
           M+E+G + D+
Sbjct: 319 MLEQGCVLDV 328



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 3/174 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A    G   +   ++  M  + I+  L + N V+ G C++G  +KA + +  M + G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+P  ++YN LI+G+ ++     M KA      M + G+LP+ +T+N +++GFC+   + 
Sbjct: 499 VAPDHISYNTLINGFVRED---NMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQ 555

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
            A  V  +M   GI     TY +LING      L+EA    DEM+  G  P+ V
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 255/474 (53%), Gaps = 43/474 (9%)

Query: 85  FLHMFVKNGKFTSVSTIFHAL---------STCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
           +  + V+NG       +FH L          +C+  L R S   + + +A          
Sbjct: 177 YFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIA---------- 226

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            + F+   + G+  + +SCN +L  L + GK  +   +  +M  R    ++ S+  V++G
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            C+ G+L+K   +++++K  G+ P    YN +I   CK G   ++ +A+ + + M + G+
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG---EVVEAEQLLRGMRKWGV 343

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ V + T+I GFCK  N+SAA K+F+EM    I   +VTY S+I+G+C  GK+ EA  
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + +EM+  GL+P+ VT  ALI+G+CK   +++A  + + + ++GL+P+V+TY  L D  C
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ++ A  + + M  +G+ P+V TYN ++ GL + GN+E    +M E+   G     +
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+ A CK G+  KA  LL  M     +   P +VT+NVL+ GFC  G LED   L+
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ---PTLVTFNVLMNGFCMSGMLEDGERLI 580

Query: 496 NELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNI 533
             +LEKG++PN TT+  + ++                M ++G +PD   + YNI
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPD--SNTYNI 632



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 210/391 (53%), Gaps = 27/391 (6%)

Query: 151 VLSCNQLLRALVKEGKFED-VEY------------------VYKEMKRRRIELNLDSFNF 191
           V+   QLLR + K G F D V Y                  ++ EM+R++I  ++ ++  
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           V++G+CK+GK+ +A ++  +M   G+ P  VTY  LIDGYCK G   +M +A +V   MV
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG---EMKEAFSVHNQMV 444

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G+ PN VT+  L DG CK+  I  A ++  EM   G+   V TYN+++NGLC  G ++
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           + V L +EM  +G  P+ +T   L++ +CK   + KA  L   +  + L P+++T+N L+
Sbjct: 505 QTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + +C  G +ED   +   ML++G++P+ +T+N L+     + N+     I   + + G+ 
Sbjct: 565 NGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM 624

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLED 490
               TYNIL+   CK    K+A  L  EM     EK +     TY+ LI+GF ++ K  +
Sbjct: 625 PDSNTYNILIKGHCKARNMKEAWFLHKEMV----EKGYSVTAATYDALIRGFYKRKKFVE 680

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           A  L  E+ + GL+  +  Y I  +   E+G
Sbjct: 681 ARKLFEEMRKHGLVAEKDIYDIFVDVNYEEG 711



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 194/384 (50%), Gaps = 14/384 (3%)

Query: 88  MFVKNGKFTSVSTIFHALSTCS------DSLCRNSIIIDMLMLAYV-----KNMKPHLGF 136
           +F  N  +T+V + F  L   S      D + R  I+ D++    V     K+ K     
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F      GL+   ++   L+    K G+ ++   V+ +M ++ +  N+ ++  + +GL
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+++ A++++ +M   G+ P V TYN +++G CK G I +  K   + ++M   G  
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVK---LMEEMDLAGFY 519

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ +T+ TL+D +CK   ++ A ++   M +  +   +VT+N L+NG C+ G L++   L
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            + M+  G+ PN  T N+L+  +C K  +     ++  + ++G+ P   TYN LI  +CK
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK 639

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
              M++A+ +   M+++G     +TY+ LI G  +       R +  E+  +G+ A    
Sbjct: 640 ARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI 699

Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
           Y+I V    ++G  +  + L DE 
Sbjct: 700 YDIFVDVNYEEGNWEITLELCDEF 723



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 164/354 (46%), Gaps = 5/354 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H   K+GK      +F+ +      L  + +    L+  Y K  +    F    +  
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLV--KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL  +V++   L   L K G+ +    +  EM R+ ++ N+ ++N ++NGLCK G + 
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +ME+M   G  P  +TY  L+D YCK   +G+M KA  + + M+   + P  VTFN
Sbjct: 505 QTVKLMEEMDLAGFYPDTITYTTLMDAYCK---MGEMAKAHELLRIMLNKRLQPTLVTFN 561

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L++GFC    +    ++ E M   GI     T+NSL+   C+   +     +   M   
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+  T N LI G CK + +++A  L  ++ E+G S +  TY+ LI  + K  +  +A
Sbjct: 622 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEA 681

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +   M   G++ +   Y+  +     EGN E    + +E +        V Y
Sbjct: 682 RKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVY 735


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 237/465 (50%), Gaps = 7/465 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           HS L    ++H LV  ++  + ++ +   V+    + V  +   +STC        +I D
Sbjct: 133 HSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCF-YFGSVGLIYD 191

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  YV+  K   G EAF+     G+  S+ +CN+LL  LV+ G  +    +Y E+ R 
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            IELN+ + N ++N LCK  K       + DM+  GV   +VTYN LI+ YC++G + + 
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++   +       G+ P  +T+N ++ G CK      A  V  EM   G+     TYN+L
Sbjct: 312 FQ---LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  +C    + EA  + DEM   G+ P++V+ ++LI    +   + +A + F ++   G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  + Y  LID +C+ G + DA  MR+ ML RG   DV TYN  + GL ++        
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + NE+V  GM     T+  L+   CKDG   KA++L + M +   +   P+ VTYN LI 
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK---PDKVTYNTLID 545

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           GFC+ G++  A  L ++++ K +IP+  +Y  V       G +P+
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 239/463 (51%), Gaps = 86/463 (18%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ + +++ N L+ A  +EG  E+   +      R +E  L ++N +L GLCK GK ++A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
            D++ +M  LG++P   TYN L+   C++  I                            
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G +Y+A   F++M  +GI+P+ V +  LIDGFC++  +S A+K+ +EM + G    
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466

Query: 294 VVTYNSLINGLCV-----------------------------------DGKLDEAVALRD 318
           VVTYN+ +NGLC                                    DG +D+A+ L +
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ + LKP+ VT N LI+GFCK   + +A+ L+DD+  + + P  I+Y T+++ +C  G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            + +A  + + ML++G+ P++ T N LI G  R G++      ++++++NG+     +YN
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+    K+   +KA  L++EM   EK     NI+TYN+++ GFC +GK+++A  +L ++
Sbjct: 647 TLIDGYLKEANLEKAFILINEM---EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703

Query: 499 LEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           +E G+ P+  TY  +                 +EM+++G +PD
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 213/371 (57%), Gaps = 8/371 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F      G+   ++S + L+  L + G        ++EM+R  I  +   +  +++G 
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGI 255
           C+ G L+ A  + ++M + G    VVTYN  ++G CKK    KM+  AD +F +MVE G+
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK----KMFADADMLFNEMVERGM 498

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+  TF TLI G+CKD N+  A+ +FE M    +    VTYN+LI+G C  G++  A  
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L D+M+   + P+ ++   ++NGFC   L+ +A  L D + E+G+ P+++T NTLI  YC
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G M  A+   + M+  G++PD  +YN LI G  +E N+E    ++NE+   G++  ++
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN+++   C +GK ++A  +L +M ++      P+  TY+ LI G   +  +++A    
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGIN---PDGATYSSLINGHVSQDNMKEAFRFH 735

Query: 496 NELLEKGLIPN 506
           +E+L++GL+P+
Sbjct: 736 DEMLQRGLVPD 746


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 227/405 (56%), Gaps = 22/405 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      +   V S N L+    + G+ ++    YKEM+ R +  ++ SF+ ++   
Sbjct: 248 EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            + G+++ A   + +MK LG+ P  V Y ++I G+C+ G    M +A  V  +MV  G L
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG---SMSEALRVRDEMVGFGCL 364

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VT+NTL++G CK   +  A K+  EM   G+   + T+ +LI+G C  G  + A+ L
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D ++   L+P+VVT N+LI+G C+K  + KA  L+DD+  + + P+ ITY+ LID++C+
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G++EDAF   + M+ +G LP++ TYN +I G  R GNV+  +  + ++  + +   L+T
Sbjct: 485 KGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLIT 544

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +N L+    K+     A ++ +    MEKE   P+ VTYN++I GF ++G ++DA  +  
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFN---IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            + + G+ P++ TY                  + +EM+ +GF PD
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 223/428 (52%), Gaps = 41/428 (9%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG------------ 165
           + D+L+  Y ++ KP   FEAF+   D+ +     + N LL  L + G            
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 166 -----------------------KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
                                  +F+  + V  EM++R +  ++ + N +++   +AG +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A  +++ M + G+ P +VTYN ++ G CK     +  KA  VF+ M +  + P+  +F
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR---RFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI GFC+   +  A+K ++EM    +   VV+++ LI      G++D A A   EM  
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL P+ V    +I GFC+   + +A  + D++   G  P V+TYNTL++  CK+ R+ D
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N M +RGV PD+ T+  LI G  R+GN E    + + L+   +R  +VTYN L+ 
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            +C+ G   KA  L D+M   E     PN +TY++LI   C+KG++EDA G L+E+++KG
Sbjct: 446 GMCRKGDLAKANELWDDMHARE---ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502

Query: 503 LIPNQTTY 510
            +PN  TY
Sbjct: 503 NLPNIRTY 510



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    ++ LI  Y +  +  +AF     +LD  V    S  N L+A LSR G     + 
Sbjct: 84  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
               ++++       T NI+V + CK  +   A +++ E   MEK   +P++VT+NVLI 
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISE---MEKRCVFPDVVTHNVLID 200

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              + G ++ A  L++ +  +GL P   TY  V
Sbjct: 201 ARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
            L  +V     P IR++   +  + ++G           +    D++  + I  + L+  
Sbjct: 494 FLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR--QDNVFPDLITFNTLIHG 551

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y+K    H  F  F       ++   ++ N ++    ++G  +D   V+K M    IE +
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
             ++  ++NG   AG   +A  + ++M   G +P
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 231/423 (54%), Gaps = 15/423 (3%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +  L+  +    KP LGF         G   +V   N +L+ L + G   +   + +EM 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           R+ +  ++ S+N ++NGLCKA KL +A  ++ +M++ G  P  VT   L+DG CK G   
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG--- 228

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +M +A  + + M + G   + V + TLI GFC + N+    ++F+EM   GI+A VVTY+
Sbjct: 229 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 288

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            L++GLC  G+  EA  + + M   G+ P+VVT   LI+G CK      A  L + + E+
Sbjct: 289 CLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 348

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  PS +TYN L+   CKEG + DAF +   M+++G   DV TYN L+ GL  +G V+  
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 408

Query: 419 RNIMNELVNN--GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             + N + +N   +   + T+N+L+G LCK+G+  KAV +     KM K+    N+VTYN
Sbjct: 409 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR---KMVKKGSCGNLVTYN 465

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------REEMMEKGFIPDIEGH 529
           +L+ G  + GK+++A  L  ++L+ G +PN  TY I+       R   + KG   ++  H
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 530 MYN 532
             N
Sbjct: 526 GLN 528



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/450 (32%), Positives = 237/450 (52%), Gaps = 22/450 (4%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           N +FT   ++FH  S    +L  +    + L+ A  ++    L F  ++R     +  S 
Sbjct: 52  NSQFTEAVSLFH--SALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSF 109

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S + L+       K +    V   + +R   +N+   N VL GLC+ G + +A  ++ +
Sbjct: 110 GSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIRE 169

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    VSP +V+YN LI+G CK     K+ +A  +  +M   G  PN VT  TL+DG CK
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAK---KLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D  +  AM++ E M   G  A VV Y +LI+G C +G LD    L DEM+  G+  NVVT
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + L++G C+    ++A  + + ++E G+ P V+TY  LID  CK+GR   A  + N M+
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++G  P   TYN L++GL +EG V     I+  ++  G +A +VTYN L+  LC  GK  
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L + MF  E   + PN+ T+N+LI G C++G+L  A  +  ++++KG   N  TY 
Sbjct: 407 EALKLFNSMFDNENCLE-PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465

Query: 512 I----------VREEM------MEKGFIPD 525
           +          ++E M      ++ GF+P+
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPN 495



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 222/455 (48%), Gaps = 37/455 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS+    LM    K+ +     E  +     G  + V+    L+      G  +  + ++
Sbjct: 213 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 272

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + I  N+ +++ +++GLC+ G+  +A+ ++  M   G+ P VVTY  LIDG CK 
Sbjct: 273 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 332

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +   A  +   MVE G  P+ VT+N L+ G CK+  +  A K+   M   G  A V
Sbjct: 333 G---RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 389

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMM--ASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           VTYN+L+ GLC  GK+DEA+ L + M    + L+PNV T N LI G CK+  + KA  + 
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + ++G   +++TYN L+    K G++++A  +   +LD G +P+  TY+ LI G  + 
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 509

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------ 460
             +   + +  E+  +G+   L  YN L+ +LCK+G  ++A SL  EM            
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 569

Query: 461 ------------FKMEKEKKW--------PNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
                       F+  KE +         P+ +T++ LI    + G+L++A   L  ++ 
Sbjct: 570 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            G  P+   Y  + + +  KG   +I   ++ ++ 
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 664



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 214/422 (50%), Gaps = 37/422 (8%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           ++   L+  +  N     G E F      G+ ++V++ + L+  L + G++++   V   
Sbjct: 250 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 309

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    I  ++ ++  +++GLCK G+   A D++  M   G  P  VTYN+L+ G CK+G 
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369

Query: 237 I--------------------------------GKMYKADAVFKDMV--ENGILPNEVTF 262
           +                                GK+ +A  +F  M   EN + PN  TF
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI G CK+  ++ A+K+  +M   G    +VTYN L+ G    GK+ EA+ L  +++ 
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  PN  T + LI+GFCK +++  A+ LF ++   GL+P++  YNTL+ + CKEG +E 
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A ++   M +    PD+ ++N +I G  + G+ + V+ +  ++V  G+R   +T++ L+ 
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            L K G+  +A S L+   +M      P+ + Y+ L+KG   KG   +   LL+++  KG
Sbjct: 610 RLSKLGELDEAKSALE---RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 503 LI 504
            +
Sbjct: 667 TV 668



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 186/357 (52%), Gaps = 19/357 (5%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC+  ++ID               F+  +   + G K+ V++ N L++ L  +GK ++  
Sbjct: 364 LCKEGLVID--------------AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 172 YVYKEM--KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            ++  M      +E N+ +FN ++ GLCK G+L KA  I   M   G    +VTYN+L+ 
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G  K G   K+ +A  ++K +++ G +PN  T++ LIDGFCK   ++ A  +F EM +HG
Sbjct: 470 GCLKAG---KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +  YN+L+  LC +G L++A +L  EM  +  +P++++ N +I+G  K    +  +
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   + E GL P  +T++TLI+   K G +++A +    M+  G  PD   Y+ L+ GL
Sbjct: 587 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           S +G+   + N+++++   G        + ++  LC   +    + LL   F+   E
Sbjct: 647 SSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE 703


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 239/488 (48%), Gaps = 21/488 (4%)

Query: 34  LQLFNSDADPVLILRYFCWSTKELRASHSLLLTG----------RLLHSLVVAKKYPKIR 83
           LQ+ N  A P L L  FC+  +       +L  G           L   +V ++  P I 
Sbjct: 24  LQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIV 83

Query: 84  SF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
            F   L +  K  +F  V ++F  +     S    +   +++M    ++ +P        
Sbjct: 84  DFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTC--NIVMNCVCRSSQPCRASCFLG 141

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +    G +  +++   LL       + ED   ++ ++       N+ ++  +++ LCK  
Sbjct: 142 KMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR 201

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            LN A +I   M   G+ P VVTYN L+ G C+   IG+   A  + +DM++ GI PN +
Sbjct: 202 HLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCE---IGRWSDAAWLLRDMMKRGIQPNVI 258

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF  LID F K   I  A ++++ M    +   V TY +LINGLC  G+LDEA  +   M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            ++G  PN VT   LI+GFCK K VE    +F ++S++GL  + ITY  LI  YC  GR 
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  + N M  R   PD+ TYN L+ GL   G VE    I   +    M   +VTY I+
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A  L   +F    +   PN++TY  +I GFC++G + +A+ L  ++ E
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMK---PNVITYTTMISGFCRRGFIHEADALFKKMKE 495

Query: 501 KGLIPNQT 508
            G +PN++
Sbjct: 496 DGFLPNES 503


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/373 (36%), Positives = 213/373 (57%), Gaps = 24/373 (6%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           MK R    ++ S++ V+NG C  G+L K   ++++M+  G+ P + TYN +I   CK G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG- 59

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             K+  A+ V ++M+  GI+P+ V + TLIDGFCK  NI AA K+F+EM    I    + 
Sbjct: 60  --KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIA 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y ++I GLC  GK+ EA  + ++M + G++P+ VT   LI+G+CK   +EKA  L + + 
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           + GL+P+V+TY  L D  CK G+++ A  + + M  +G+  ++ TYN L+ GL + GN+ 
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +M E+   GM    +T+  L+ A CK G+  KA  LL EM     +   P ++T+N
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQ---PTVITFN 294

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------------MMEK 520
           VL+ GFC  G LED   LL  +LEKG++PN TTY  + ++                M  +
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 521 GFIPDIEGHMYNI 533
           G +PD   + YNI
Sbjct: 355 GVMPD--SNTYNI 365



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 197/366 (53%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK ++ + N ++  L K GK +D E V +EM  + I  +   +  +++G CK G +  A
Sbjct: 40  GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAA 99

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M+   + P  + Y  +I G C+    GKM +AD VF  M   G+ P+EVT+ TL
Sbjct: 100 YKLFDEMEKQRIVPDFIAYTAVICGLCR---CGKMMEADKVFNKMFSRGVEPDEVTYTTL 156

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK   +  A  +  +M   G+   VVTY +L +GLC  G++D A  L  EM   GL
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL 216

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N+ T N+L+NG CK   + +A  L +++   G+ P  IT+ TL+DAYCK G M  A  
Sbjct: 217 QLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHE 276

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLDRG+ P V T+N L+ G    G +E    ++  ++  G+     TYN L+   C
Sbjct: 277 LLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336

Query: 446 KDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                +  +    E++K M      P+  TYN+LIKG C+   +++A  L  E+ EKG  
Sbjct: 337 ----IRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392

Query: 505 PNQTTY 510
              ++Y
Sbjct: 393 LTASSY 398



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 197/358 (55%), Gaps = 10/358 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K G  +    ++ EM+++RI  +  ++  V+ GLC+ GK+ +A  +   M S G
Sbjct: 86  LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V P  VTY  LIDGYCK G   +M KA ++   MV++G+ PN VT+  L DG CK   + 
Sbjct: 146 VEPDEVTYTTLIDGYCKSG---EMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVD 202

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++  EM   G+   + TYNSL+NGLC  G + +AV L +EM  +G+ P+ +T   L+
Sbjct: 203 TANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + +CK   + KA  L  ++ ++GL P+VIT+N L++ +C  G +ED   +   ML++G++
Sbjct: 263 DAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIM 322

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+       N+     I   +   G+     TYNIL+   CK    K+A  L
Sbjct: 323 PNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFL 382

Query: 457 LDEMFKMEKEKKWPNIV--TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
             EM      +K  N+   +YN +IKGF +K K+ +A  L  E+  +G+  +   Y +
Sbjct: 383 HKEM-----AEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 8/417 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S + +  K+GK      +   +   +  +  ++++   L+  + K       ++ F    
Sbjct: 50  SIILLLCKSGKVDDAERVLREM--INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEME 107

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              +    ++   ++  L + GK  + + V+ +M  R +E +  ++  +++G CK+G++ 
Sbjct: 108 KQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEME 167

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +   M   G++P VVTY  L DG CK   +G++  A+ +  +M   G+  N  T+N
Sbjct: 168 KAFSLHNQMVQSGLTPNVVTYTALADGLCK---LGQVDTANELLHEMCGKGLQLNICTYN 224

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +L++G CK  NI  A+K+ EEM   G+    +T+ +L++  C  G++ +A  L  EM+  
Sbjct: 225 SLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P V+T N L+NGFC   ++E    L   + E+G+ P+  TYN+L+  YC    M   
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  RGV+PD +TYN LI G  +  N++    +  E+   G      +YN ++  
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKG 404

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             K  K  +A  L +E   M +E    +   YN+ +     +G +E A  L +E +E
Sbjct: 405 FFKKKKISEARELFEE---MRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 175/338 (51%), Gaps = 9/338 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F +    G++   ++   L+    K G+ E    ++ +M +  +  N+ ++  + +GL
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+++ A++++ +M   G+   + TYN L++G CK G I +  K   + ++M   G+ 
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK---LMEEMEVAGMY 252

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ +TF TL+D +CK   +  A ++  EM   G+   V+T+N L+NG C+ G L++   L
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M+  G+ PN  T N+L+  +C +  +     ++  +  +G+ P   TYN LI  +CK
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
              M++A+ +   M ++G     S+YN +I G  ++  +   R +  E+   GM A    
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432

Query: 437 YNILVGALCKDGKSKKAVSLLDEMF------KMEKEKK 468
           YN+ V     +G  + A+ L DE        +++KEK+
Sbjct: 433 YNLFVDISYGEGNMETALELCDEAIENCFLNRIKKEKQ 470



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 171/340 (50%), Gaps = 5/340 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             + GK      +F+ +   S  +  + +    L+  Y K+ +    F    +    GL 
Sbjct: 125 LCRCGKMMEADKVFNKMF--SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLT 182

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V++   L   L K G+ +    +  EM  + ++LN+ ++N ++NGLCK+G + +A  +
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKL 242

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           ME+M+  G+ P  +T+  L+D YCK    G+M KA  + ++M++ G+ P  +TFN L++G
Sbjct: 243 MEEMEVAGMYPDTITFTTLMDAYCK---TGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           FC    +    ++   M   GI     TYNSL+   C+   +     +   M A G+ P+
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPD 359

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T N LI G CK + +++A  L  +++E+G + +  +YN++I  + K+ ++ +A  +  
Sbjct: 360 SNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFE 419

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            M   G+  D   YN  +     EGN+E    + +E + N
Sbjct: 420 EMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 119/216 (55%), Gaps = 3/216 (1%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G  P+VV+ + +ING+C    ++K   L  ++  +GL P++ TYN++I   CK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++DA  +   M+++G++PD   Y  LI G  + GN++    + +E+    +    + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++  LC+ GK  +A  + ++MF    E   P+ VTY  LI G+C+ G++E A  L N+++
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVE---PDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           + GL PN  TY  + + + + G +      ++ + G
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG 213


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 260/561 (46%), Gaps = 77/561 (13%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L N   +P   L +F + +K+     ++    +L+H L   + Y + R++L+  V   KF
Sbjct: 75  LRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKF 134

Query: 96  TSV-STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
               + I+  L         +  + DM++  YV+          F   G  G   S+ SC
Sbjct: 135 KDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSC 194

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  LVK G+     YVY++M R  I  ++   + ++N  CK GK+++A+  ++ M++
Sbjct: 195 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           LGV P +VTY+ LI+GY     +G +  A  V K M E G+  N VT+  LI G+CK   
Sbjct: 255 LGVEPNIVTYHSLINGYV---SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311

Query: 275 ISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +  A KV   M     +      Y  LI+G C  GK+D+AV L DEM+  GLK N+   N
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +LING+CK+  + +A  +   + +  L P   +YNTL+D YC+EG   +AF + + ML  
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 394 GVLPDVSTYNCLIAGLSREG-----------------------------------NVEGV 418
           G+ P V TYN L+ GL R G                                   N EG 
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------------ 460
             +  +++  G     +T+N ++  LCK GK  +A  + D+M                  
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 461 ----------FK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                     FK    ME+E   P+I  YN LI G  +  +L +   LL E+  +GL PN
Sbjct: 552 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 611

Query: 507 QTTYQIV-----REEMMEKGF 522
             TY  +     +E M++K F
Sbjct: 612 IVTYGALIDGWCKEGMLDKAF 632



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 209/422 (49%), Gaps = 67/422 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    +  + LL  L K   FE    ++K++  R    +  +FN +++GLCK GK+ +A
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA--------------------DA 245
            +I + MK LG SP  +TY  LIDGYCK   +G+ +K                       
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586

Query: 246 VFK------------DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +FK            +M   G+ PN VT+  LIDG+CK+  +  A   + EM  +G++A 
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASG----------------------------- 324
           ++  +++++GL   G++DEA  L  +M+  G                             
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706

Query: 325 ---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              L PN +  N  I G CK   V+ AR  F  +S +G  P   TY TLI  Y   G ++
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +AF +R+ ML RG++P++ TYN LI GL +  NV+  + + ++L   G+   +VTYN L+
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK G    A  L D   KM +E   P++VTY+ LI G C+ G +E +  LLN++++ 
Sbjct: 827 DGYCKIGNMDAAFKLKD---KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 502 GL 503
           G+
Sbjct: 884 GV 885



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 242/507 (47%), Gaps = 67/507 (13%)

Query: 78  KYPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML-----AYVKN 129
           + P +RS    L+  VKNG+  +   ++         + R  I+ D+ M+     A+ K+
Sbjct: 187 RIPSLRSCNSLLNNLVKNGETHTAHYVYQ-------QMIRVGIVPDVFMVSIMVNAFCKD 239

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K        K+  + G++ ++++ + L+   V  G  E  + V K M  + +  N+ ++
Sbjct: 240 GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY 299

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGI----------- 237
             ++ G CK  K+++A  ++  M+    + P    Y +LIDGYC+ G I           
Sbjct: 300 TLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 359

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G++++A+ V   MV+  + P+  ++NTL+DG+C++ + S
Sbjct: 360 RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTS 419

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  + ++M   GI   V+TYN+L+ GLC  G  D+A+ +   MM  G+ P+ V  + L+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G  K +  E A  L+ DI  +G + S IT+NT+I   CK G+M +A  + + M D G  
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY  LI G  +  NV     +   +    +   +  YN L+  L    KS++ V +
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF---KSRRLVEV 596

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN--------QT 508
            D + +M      PNIVTY  LI G+C++G L+ A     E+ E GL  N          
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 509 TYQIVR--------EEMMEKGFIPDIE 527
            Y++ R        ++M++ GF PD E
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHE 683



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 64/388 (16%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +  D G     ++   L+    K         V   M+R  I  +++ +N +++GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K+ +L + +D++ +M   G++P +VTY  LIDG+CK+G                     
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 236 -----------GIGKMYKADAVFKDMVENG------------------------------ 254
                       +G++ +A+ + + MV++G                              
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 255 --ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             +LPN + +N  I G CK   +  A + F  +   G      TY +LI+G    G +DE
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  LRDEM+  GL PN+VT NALING CK + V++A+ LF  + ++GL P+V+TYNTLID
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G M+ AF +++ M++ G+ P V TY+ LI GL + G++E    ++N+++  G+ +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEM 460
            L+ Y  LV    + G+ +K   L D M
Sbjct: 888 KLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 48/435 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK+++  CN L+    K G+  + E V   M    ++ +  S+N +L+G C+ G  ++A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M   G+ P V+TYN L+ G C+   +G    A  ++  M++ G+ P+EV ++TL
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCR---VGAFDDALQIWHLMMKRGVAPDEVGYSTL 478

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG  K EN   A  +++++ + G     +T+N++I+GLC  GK+ EA  + D+M   G 
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T   LI+G+CK   V +A  +   +  + +SPS+  YN+LI    K  R+ +   
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 598

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG+ P++ TY  LI G  +EG ++   +   E+  NG+ A ++  + +V  L 
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 446 KDGKSKKAVSLLDEMFK----------MEKEKKW-------------------PNIVTYN 476
           + G+  +A  L+ +M            ++ + ++                   PN + YN
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEK 520
           + I G C+ GK++DA    + L  KG +P+  TY  +                R+EM+ +
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 521 GFIPDIEGHMYNISG 535
           G +P+I  +   I+G
Sbjct: 779 GLVPNIVTYNALING 793



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  +  L K GK +D    +  +  +    +  ++  +++G   AG +++A  + ++M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P +VTYN LI+G CK   + +   A  +F  + + G+ PN VT+NTLIDG+CK  N
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDR---AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA K+ ++M   GI+  VVTY++LINGLC  G ++ ++ L ++M+ +G+   ++    
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           L+ G+ +   ++K   L+D +  + LS + I++
Sbjct: 895 LVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 2/221 (0%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A+ + D M   G  P++ + N+L+N   K      A  ++  +   G+ P V   
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +++A+CK+G++++A      M + GV P++ TY+ LI G    G+VE  + ++  +  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 289

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   +VTY +L+   CK  K  +A  +L  M   E+    P+   Y VLI G+C+ GK
Sbjct: 290 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGK 347

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           ++DA  LL+E+L  GL  N      +     ++G I + EG
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 260/561 (46%), Gaps = 77/561 (13%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L N   +P   L +F + +K+     ++    +L+H L   + Y + R++L+  V   KF
Sbjct: 75  LRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKF 134

Query: 96  TSV-STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
               + I+  L         +  + DM++  YV+          F   G  G   S+ SC
Sbjct: 135 KDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSC 194

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  LVK G+     YVY++M R  I  ++   + ++N  CK GK+++A+  ++ M++
Sbjct: 195 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           LGV P +VTY+ LI+GY     +G +  A  V K M E G+  N VT+  LI G+CK   
Sbjct: 255 LGVEPNIVTYHSLINGYV---SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311

Query: 275 ISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +  A KV   M     +      Y  LI+G C  GK+D+AV L DEM+  GLK N+   N
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +LING+CK+  + +A  +   + +  L P   +YNTL+D YC+EG   +AF + + ML  
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 394 GVLPDVSTYNCLIAGLSREG-----------------------------------NVEGV 418
           G+ P V TYN L+ GL R G                                   N EG 
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------------ 460
             +  +++  G     +T+N ++  LCK GK  +A  + D+M                  
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 461 ----------FK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                     FK    ME+E   P+I  YN LI G  +  +L +   LL E+  +GL PN
Sbjct: 552 YCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 507 QTTYQIV-----REEMMEKGF 522
             TY  +     +E M++K F
Sbjct: 612 IVTYGALIDGWCKEGMLDKAF 632



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 209/422 (49%), Gaps = 67/422 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    +  + LL  L K   FE    ++K++  R    +  +FN +++GLCK GK+ +A
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA--------------------DA 245
            +I + MK LG SP  +TY  LIDGYCK   +G+ +K                       
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISG 586

Query: 246 VFK------------DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +FK            +M   G+ PN VT+  LIDG+CK+  +  A   + EM  +G++A 
Sbjct: 587 LFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASG----------------------------- 324
           ++  +++++GL   G++DEA  L  +M+  G                             
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706

Query: 325 ---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              L PN +  N  I G CK   V+ AR  F  +S +G  P   TY TLI  Y   G ++
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +AF +R+ ML RG++P++ TYN LI GL +  NV+  + + ++L   G+   +VTYN L+
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK G    A  L D   KM +E   P++VTY+ LI G C+ G +E +  LLN++++ 
Sbjct: 827 DGYCKIGNMDAAFKLKD---KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 502 GL 503
           G+
Sbjct: 884 GV 885



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 241/507 (47%), Gaps = 67/507 (13%)

Query: 78  KYPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML-----AYVKN 129
           + P +RS    L+  VKNG+  +   ++         + R  I+ D+ M+     A+ K+
Sbjct: 187 RIPSLRSCNSLLNNLVKNGETHTAHYVYQ-------QMIRVGIVPDVFMVSIMVNAFCKD 239

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K        K+  + G++ ++++ + L+   V  G  E  + V K M  + +  N+ ++
Sbjct: 240 GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY 299

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGI----------- 237
             ++ G CK  K+++A  ++  M+    + P    Y +LIDGYC+ G I           
Sbjct: 300 TLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 359

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G++++A+ V   MV+  + P+  ++NTL+DG+C++ + S
Sbjct: 360 RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTS 419

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  + ++M   GI   V+TYN+L+ GLC  G  D+A+ +   MM  G+ P+ V  + L+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G  K +  E A  L+ DI  +G + S IT+NT+I   CK G+M +A  + + M D G  
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY  LI G  +  NV     +   +    +   +  YN L+  L    KS++ V  
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF---KSRRLVEX 596

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN--------QT 508
            D + +M      PNIVTY  LI G+C++G L+ A     E+ E GL  N          
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 509 TYQIVR--------EEMMEKGFIPDIE 527
            Y++ R        ++M++ GF PD E
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHE 683



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 48/435 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK+++  CN L+    K G+  + E V   M    ++ +  S+N +L+G C+ G  ++A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M   G+ P V+TYN L+ G C+   +G    A  ++  M++ G+ P+EV ++TL
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCR---VGAFDDALQIWHLMMKXGVAPDEVGYSTL 478

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG  K EN   A  +++++ + G     +T+N++I+GLC  GK+ EA  + D+M   G 
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T   LI+G+CK   V +A  +   +  + +SPS+  YN+LI    K  R+ +   
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTD 598

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG+ P++ TY  LI G  +EG ++   +   E+  NG+ A ++  + +V  L 
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 446 KDGKSKKAVSLLDEMFK----------MEKEKKW-------------------PNIVTYN 476
           + G+  +A  L+ +M            ++ + ++                   PN + YN
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEK 520
           + I G C+ GK++DA    + L  KG +P+  TY  +                R+EM+ +
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 521 GFIPDIEGHMYNISG 535
           G +P+I  +   I+G
Sbjct: 779 GLVPNIVTYNALING 793



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 64/369 (17%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +  D G     ++   L+    K         V   M+R  I  +++ +N +++GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K+ +L + +D++ +M   G++P +VTY  LIDG+CK+G                     
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 236 -----------GIGKMYKADAVFKDMVENG------------------------------ 254
                       +G++ +A+ + + MV++G                              
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 255 --ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             +LPN + +N  I G CK   +  A + F  +   G      TY +LI+G    G +DE
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  LRDEM+  GL PN+VT NALING CK + V++A+ LF  + ++GL P+V+TYNTLID
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G M+ AF +++ M++ G+ P V TY+ LI GL + G++E    ++N+++  G+ +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 433 GLVTYNILV 441
            L+ Y  LV
Sbjct: 888 KLIEYCTLV 896



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 146/280 (52%), Gaps = 6/280 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F ++    + GL ++++ C+ ++  L + G+ ++   + ++M       + + F   L 
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LK 687

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              +   + K +D +++     + P  + YNI I G CK G   K+  A   F  +   G
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG---KVDDARRFFSMLSLKG 744

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            +P+  T+ TLI G+    N+  A ++ +EM   G+   +VTYN+LINGLC    +D A 
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  ++   GL PNVVT N LI+G+CK   ++ A  L D + E+G+SPSV+TY+ LI+  
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           CK G +E +  + N M+  GV   +  Y  L+ G  +  N
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN 904



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 2/221 (0%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A+ + D M   G  P++ + N+L+N   K      A  ++  +   G+ P V   
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +++A+CK+G++++A      M + GV P++ TY+ LI G    G+VE  + ++  +  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 289

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   +VTY +L+   CK  K  +A  +L  M   E+    P+   Y VLI G+C+ GK
Sbjct: 290 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGK 347

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           ++DA  LL+E+L  GL  N      +     ++G I + EG
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 56/112 (50%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +    GL  +V++ N L+    K G  +    +  +M    I  ++ +++ ++NGLCK
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            G + ++  ++  M   GV  K++ Y  L+ G  K     +M K +A+ ++M
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNM 918


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 257/520 (49%), Gaps = 66/520 (12%)

Query: 46  ILRYFCWST---KELRASHSLLLTGRLLHSLVVA------KKYPKIRSFLHMFVKNGKFT 96
           I+  FC +    K L    +LL  G L              K  +I++ LH+  +  K +
Sbjct: 131 IINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK-S 189

Query: 97  SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQ 156
           SV       S   D LC++  + D L L                + G+ G+    ++ N 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLC--------------SQIGERGILLDAVTYNS 235

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+      G++++V  +  +M R  ++ +  +FN +++ LCK G++ +A  ++  M   G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +VTYN L++GYC +  +   ++A  +F  MV+ G+ P+ + +N LIDG+CK + + 
Sbjct: 296 EKPDIVTYNALMEGYCSRENV---HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM---------------- 320
            AM +F+E+ +  +   + +YNSLI+GLC  G++     L DEM                
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 321 -------------------MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
                              M  G+KPN+VT NA+++G+C +  V  A+ +F+ + + GL 
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P ++ YN LI+ YCK   +++A  +   M  + ++PD+++YN LI GL   G +  V+ +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++E+ ++G    ++TYNIL+ A CK     KA+SL    F+   E  WP+  T + ++  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL----FRQIVEGIWPDFYTNHAIVDN 588

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+  KL+ A   L  LL  G  PN  TY I+   + + G
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 241/472 (51%), Gaps = 34/472 (7%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            L   V+ G + +  ++F  L +   S S+   +I+I+     Y         F      
Sbjct: 61  LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN----CYFHQSHTAFAFSLLATI 116

Query: 143 GDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNF--VLNGLCKA 199
              G + ++++ N ++      G  F+ +++    + +  +    D F +  ++NGL K 
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL---FDQFTYGTLINGLSKN 173

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G++  A  ++++M+   V P +V Y+ LIDG CK G +     A  +   + E GIL + 
Sbjct: 174 GQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD---ALGLCSQIGERGILLDA 230

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+N+LIDG C         ++  +M    +     T+N LI+ LC +G++ EA  +   
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G KP++VT NAL+ G+C ++ V +AR LF+ + ++GL P V+ YN LID YCK   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  +   + ++ ++P +++YN LI GL   G +  V+ +++E+  +     +VTYNI
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ ALCK+G+  +A+ +L     M K+   PNIVTYN ++ G+C +  +  A  + N ++
Sbjct: 411 LIDALCKEGRILEALGVL---VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 500 EKGLIPNQTTYQ----------------IVREEMMEKGFIPDIEGHMYNISG 535
           + GL P+   Y                 ++ +EM  K  IPDI  +   I G
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 200/371 (53%), Gaps = 6/371 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K G+ +   ++ +EM++  ++ NL  ++ +++GLCK G ++ A  +   +   G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +    VTYN LIDG C    +G+  +   +   MV   + P++ TFN LID  CK+  I 
Sbjct: 226 ILLDAVTYNSLIDGCC---SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  V   M   G    +VTYN+L+ G C    + EA  L + M+  GL+P+V+  N LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+CK K+V++A VLF ++  + L P++ +YN+LID  C  GR+     + + M      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV TYN LI  L +EG +     ++  ++  G++  +VTYN ++   C       A  +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            + M K   E   P+I+ YNVLI G+C+   +++A  L  E+  K LIP+  +Y  + + 
Sbjct: 463 FNRMVKSGLE---PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 517 MMEKGFIPDIE 527
           +   G IP ++
Sbjct: 520 LCNLGRIPHVQ 530



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 188/378 (49%), Gaps = 37/378 (9%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + LM  Y      H   E F R    GL+  VL+ N L+    K    ++   ++KE
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +  + +   + S+N +++GLC +G+++    ++++M      P VVTYNILID  CK+G 
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG- 419

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             ++ +A  V   M++ G+ PN VT+N ++DG+C   N++ A  +F  M   G+   ++ 
Sbjct: 420 --RILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LING C    +DEA+ L  EM    L P++ + N+LI+G C    +   + L D++ 
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD------------------------ 392
           + G SP VITYN L+DA+CK    + A ++   +++                        
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 393 ----------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                      G  P+V TY  LI  L ++G+      +++++ +N      +T+ I++G
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 443 ALCKDGKSKKAVSLLDEM 460
            L +  ++ KA  L +EM
Sbjct: 658 VLLQRNETDKAEKLREEM 675



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D    +  M R         F+ +L  + + G    A  +   ++S G+SP + T+ IL
Sbjct: 37  DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+ Y  +      +   ++   ++++G  PN VTFNT+I+GFC +  I  A+   + + +
Sbjct: 97  INCYFHQSHTAFAF---SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G      TY +LINGL  +G++  A+ L  EM  S ++PN+V  +ALI+G CK   V  
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L   I E+G+    +TYN+LID  C  GR ++   +   M+   V PD  T+N LI 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            L +EG +   + ++  +   G +  +VTYN L+   C      +A  L + M K   E 
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE- 332

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             P+++ YNVLI G+C+   +++A  L  EL  K L+P   +Y  + + +   G I  ++
Sbjct: 333 --PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 528 GHMYNISGTS 537
             +  + G++
Sbjct: 391 KLLDEMHGSA 400



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 37/326 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK   +  L  ++ S N L+  L   G+   V+ +  EM       ++ ++N +++ LCK
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +A  ++  M   GV P +VTYN ++DGYC +  +     A  +F  MV++G+ P+
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV---AKDIFNRMVKSGLEPD 474

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            + +N LI+G+CK E +  A+ +F+EM    +   + +YNSLI+GLC  G++     L D
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE--------------------- 357
           EM  SG  P+V+T N L++ FCK +  +KA  LF  I E                     
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594

Query: 358 -------------QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
                         G SP+V TY  LI+A CK+G   +A  + + M D    PD  T+  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGM 430
           +I  L +    +    +  E++  G+
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 4/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + +M  Y      ++  + F R    GL+  +L+ N L+    K    ++   ++
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM+ + +  ++ S+N +++GLC  G++    +++++M   G SP V+TYNIL+D +CK 
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                  KA ++F+ +VE GI P+  T + ++D  CK E +  A    + +  HG +  V
Sbjct: 559 QPFD---KAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY  LIN LC DG   EA+ L  +M  +   P+ +T   +I    ++   +KA  L ++
Sbjct: 615 QTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREE 674

Query: 355 ISEQGL 360
           +  +GL
Sbjct: 675 MIARGL 680



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ AL KEG+  +   V   M ++ ++ N+ ++N +++G C    +N A DI  
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G+ P ++ YN+LI+GYCK   + +   A  +FK+M    ++P+  ++N+LIDG C
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDE---AIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE----------- 319
               I    ++ +EM   G +  V+TYN L++  C     D+A++L  +           
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYT 581

Query: 320 -----------------------MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
                                  ++  G  PNV T   LIN  CK     +A +L   + 
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +    P  IT+  +I    +    + A  +R  M+ RG++
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 131/259 (50%), Gaps = 3/259 (1%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  N+  A+  F  M           ++ L+  +   G    A++L  ++ + G+ P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   LIN +  +     A  L   I + G  P+++T+NT+I+ +C  G +  A     +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +L +G L D  TY  LI GLS+ G ++   +++ E+  + ++  LV Y+ L+  LCKDG 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A+ L  +   + +     + VTYN LI G C  G+ ++   LL +++ + + P+  T
Sbjct: 211 VSDALGLCSQ---IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 510 YQIVREEMMEKGFIPDIEG 528
           + I+ + + ++G I + +G
Sbjct: 268 FNILIDALCKEGRILEAQG 286


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 210/365 (57%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   + ++ N L+ A  + G+ +  E +   M+   ++ NL +FN V+NG+CKAG++  A
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDA 246

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M   G++P  V+YN L+ GYCK   +G  ++A +VF +M   GI+P+ VTF +L
Sbjct: 247 RKVFDEMVKEGLAPDGVSYNTLVGGYCK---VGCSHEALSVFAEMTRKGIMPDVVTFTSL 303

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   CK  N+  A+ +  EM   G+    +T+ +LI+G C  G LD+A+    EM    +
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+VV  NALING+C    +++AR L  ++  +G+ P V+TY+T++ AYCK G    AF 
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML+ GVLPD  TY+ LI  L  E  +     +   +++ G++   VTY  L+   C
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G  ++A+SL DEM    K    P++VTY+VLI G  +  + ++A  LL +L  +  +P
Sbjct: 484 KEGNVERALSLHDEMV---KAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540

Query: 506 NQTTY 510
               Y
Sbjct: 541 ANIKY 545



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 216/392 (55%), Gaps = 25/392 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V + N L+RAL   G  ++   V ++M+    + N  ++N ++   C+AG++++A
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA 211

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++ M+  G+ P +VT+N +++G CK G   +M  A  VF +MV+ G+ P+ V++NTL
Sbjct: 212 ERLVDMMREGGLKPNLVTFNSVVNGICKAG---RMEDARKVFDEMVKEGLAPDGVSYNTL 268

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+CK      A+ VF EM   GI   VVT+ SLI+ +C  G L+ AV L  EM   GL
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N +T  ALI+GFCKK  ++ A +   ++ +  + PSV+ YN LI+ YC  GRM++A  
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +GV PDV TY+ +++   + G+      +  +++ NG+    +TY+ L+  LC
Sbjct: 389 LVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLC 448

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++ +   A  L   M  +  +   P+ VTY  LI G C++G +E A  L           
Sbjct: 449 EEKRLGDAHVLFKNMISLGLQ---PDEVTYTSLIDGHCKEGNVERALSL----------- 494

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
                    +EM++ G +PD+  +   I+G S
Sbjct: 495 --------HDEMVKAGVLPDVVTYSVLINGLS 518



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 172/326 (52%), Gaps = 23/326 (7%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G +P V+ YN ++           +  A   F  M+ +G+ PN  T+N L+   C   + 
Sbjct: 118 GYAPSVLAYNAVLLALSD----ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR 173

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ V  +M   G     VTYN+L+   C  G++D A  L D M   GLKPN+VT N++
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +NG CK   +E AR +FD++ ++GL+P  ++YNTL+  YCK G   +A ++   M  +G+
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PDV T+  LI  + + GN+E    ++ E+   G++   +T+  L+   CK G    A+ 
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-- 513
            + E   M + +  P++V YN LI G+C  G++++A  L+ E+  KG+ P+  TY  +  
Sbjct: 354 AVRE---MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 514 --------------REEMMEKGFIPD 525
                          ++M+E G +PD
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPD 436



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 209/436 (47%), Gaps = 66/436 (15%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDML-------MLAYVKNMKPHLGFEAFKRAGDY 145
           G +  V     ALS  ++ + R  I+ D++       ++    N++  +G    +   + 
Sbjct: 270 GGYCKVGCSHEALSVFAE-MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL--VREMRER 326

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ + ++   L+    K+G  +D     +EM++ RI+ ++  +N ++NG C  G++++A
Sbjct: 327 GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEA 386

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++ +M++ GV P VVTY+ ++  YCK G     ++ +   + M+ENG+LP+ +T+++L
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN---QQMLENGVLPDAITYSSL 443

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C+++ +  A  +F+ M S G+    VTY SLI+G C +G ++ A++L DEM+ +G+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 326 KPNVVTSNALING----------------------------------------------- 338
            P+VVT + LING                                               
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 339 ---FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
              FC K L+ +A  ++  I ++  +     Y+ LI  +C+EG +  A +    ML  G 
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGF 623

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            P+ ++   LI GL  +G V     ++ +L+N    A       L+    K+G      +
Sbjct: 624 APNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVD---A 680

Query: 456 LLDEMFKMEKEKKWPN 471
           +LD +  M ++   P+
Sbjct: 681 VLDVLHGMARDGLLPS 696


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 258/516 (50%), Gaps = 53/516 (10%)

Query: 26  NTDPNTVILQLFNSDADPVLILRYFCWSTKELRA-SHSLLLTGRLLHSLVVAKKYPKIRS 84
           +T P  ++ ++ NS  D  L L +F W+   +   SH+      LL  LV  KK+   R 
Sbjct: 40  STTPR-IVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKH---RE 95

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML--------MLAYVKNMKPHLGF 136
              +F               L++C   +C  +I+I            L  ++ MK   GF
Sbjct: 96  AGDLFRS-----------ELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK-SAGF 143

Query: 137 E-----------AFKRAGDY----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
                       A   AGD           G   +V++   L+ A  +  K E+   + +
Sbjct: 144 APDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE 203

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM+ R    NL ++N +++ LCK   +  A D+++ M   G +P V+T+N L+DG+CK+G
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +    K   +   MV  G+ PN VT++ LIDG CK +    A +V EEM + G+     
Sbjct: 264 NVDDARK---LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY++LI+GLC   K++EA  +   M  SG  P+VV  +++I+ FCK   + +A+    ++
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGN 414
            +Q  SP V+TYNT+ID  CK G++ +A  +   M + G VLPDV TY+ +I GL +   
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   + +++ +   G    +VTY  ++  LCK G+ ++A  LL     M++    PN+VT
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ---GMKRAGCAPNVVT 497

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           Y  LI G C+  K+++A  ++ E+   G  PN  TY
Sbjct: 498 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 533



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 204/363 (56%), Gaps = 5/363 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  K+  + G   +V++ N L+    K G  +D   +   M  + +  N+ +++ +++GL
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK+ K  +A +++E+MK+ GV+P   TY+ LI G CK     K+ +A+ + + M  +G  
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKAD---KIEEAEQMLRRMAGSGCT 351

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V ++++I  FCK   +  A K  +EM     +  VVTYN++I+GLC  GK+ EA  +
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411

Query: 317 RDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
            ++M  SG + P+VVT + +ING CK  ++ +A+ L D + + G +P V+TY T+ID  C
Sbjct: 412 LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 471

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K GR+E+A  +   M   G  P+V TY  LI+GL +   V+    +M E+ N G    LV
Sbjct: 472 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 531

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN +V  LC  G+ K+A  L+  M K  + +  P+  TY  ++        +++A  LL
Sbjct: 532 TYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 590

Query: 496 NEL 498
            ++
Sbjct: 591 EQM 593



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 219/433 (50%), Gaps = 37/433 (8%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           +K+ K  L F  +  A   G   +  S N LL+ LV+  K  +   +++       E ++
Sbjct: 53  LKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDV 112

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKS-------------------------------- 214
            S+N V++G C AG L+ A +++E+MKS                                
Sbjct: 113 CSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRS 172

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G  P VVTY  LI  + +     K+ +A  + ++M E G  PN VT+N L+D  CK   
Sbjct: 173 MGCDPNVVTYTALIAAFARAK---KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  V ++M   G A  V+T+NSL++G C  G +D+A  L   M+A G++PNVVT +A
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+G CK +   +A+ + +++  +G++P   TY+ LI   CK  ++E+A  M   M   G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV  Y+ +I    + G +   +  + E+        +VTYN ++  LCK GK  +A 
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            +L++M   E     P++VTY+ +I G C+   L +A  LL+ + + G  P+  TY  + 
Sbjct: 410 VILEQM--QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467

Query: 515 EEMMEKGFIPDIE 527
           + + + G + + E
Sbjct: 468 DGLCKCGRLEEAE 480



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 169/314 (53%), Gaps = 6/314 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    L+    K+ K     E  +     G+     + + L+  L K  K E+ E + 
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M       ++  ++ +++  CK+GKL +A   +++M+    SP VVTYN +IDG CK 
Sbjct: 343 RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK- 401

Query: 235 GGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             +GK+ +A  + + M E+G +LP+ VT++T+I+G CK + +  A K+ + M   G    
Sbjct: 402 --LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 459

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTY ++I+GLC  G+L+EA  L   M  +G  PNVVT   LI+G CK + V++A  + +
Sbjct: 460 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD--RGVLPDVSTYNCLIAGLSR 411
           ++   G  P+++TYNT+++  C  GR+++A  +   M D      PD +TY  ++  L  
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 579

Query: 412 EGNVEGVRNIMNEL 425
              V+    ++ ++
Sbjct: 580 SDLVQEAEQLLEQM 593



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 6/243 (2%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V +YN +I+G C  G L  A+ L +EM ++G  P+  T   +I        ++ A    D
Sbjct: 112 VCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MD 168

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +   G  P+V+TY  LI A+ +  ++E+A  +   M +RG  P++ TYN L+  L +  
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V   ++++ +++  G    ++T+N LV   CK G    A  LL  M     +   PN+V
Sbjct: 229 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA---KGMRPNVV 285

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           TY+ LI G C+  K  +A  +L E+  +G+ P+  TY  +   + +   I + E  +  +
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 534 SGT 536
           +G+
Sbjct: 346 AGS 348



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 12/245 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           S +H F K+GK          +       D +  N++I  +  L  +   +  +  E  +
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA--EAQVILEQMQ 416

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
            +GD  +   V++ + ++  L K     + + +   M +     ++ ++  +++GLCK G
Sbjct: 417 ESGD--VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +L +A  +++ MK  G +P VVTY  LI G CK     K+ +A+ V ++M   G  PN V
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR---KVDEAERVMEEMRNAGCPPNLV 531

Query: 261 TFNTLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           T+NT+++G C    I  A ++ + M  G    +    TY +++N L     + EA  L +
Sbjct: 532 TYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 591

Query: 319 EMMAS 323
           +M ++
Sbjct: 592 QMKST 596



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           ++N L+  L +  K ++A  L         E   P++ +YN++I GFC  G L  A  LL
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCE---PDVCSYNIVISGFCNAGDLHAALELL 135

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
            E+   G  P+  T+  +   M   G   D++G M
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAG---DLDGAM 167


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 255/507 (50%), Gaps = 47/507 (9%)

Query: 45  LILRYFCWSTK----ELRA-SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVS 99
           L L++  W  +    ELR  +H L +T    H LV A+ Y   +S L    + G      
Sbjct: 27  LALKFLNWVIQQPGLELRHLTHMLSIT---THILVRARLYENAKSILKHLSQMG--VGSK 81

Query: 100 TIFHALSTCSDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
           ++F AL   +  LC+ N  + D+L+  Y++        E F+  G  G   SV +CN LL
Sbjct: 82  SVFGALMN-TYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLL 140

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
             LVKE K   V   +KEM  RR+  ++ +FN ++N LC  GKL KA  +++ M+  G  
Sbjct: 141 GKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYV 200

Query: 219 PKVVTYNILIDGYCKKGGI-----------GKMYKADA---------------------V 246
           P VVTYN +++ YCKKG              K  +ADA                     +
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLL 260

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            K M +  I PNE+T+N++I+GF K+  I AA ++F+EM    +    VTYN+LI+G C 
Sbjct: 261 LKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCH 320

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           DG  ++A+ + + M A+G KPN V+ +AL+NG C+    E ++ + + +   G+    I 
Sbjct: 321 DGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIA 380

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y  +ID  C+ G + ++  + + ML  GV+PDV T++ LI G  R G ++ V+ I+ ++ 
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMY 440

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+    + Y  L+   CK G   +A  +   M ++  +    N    NVL+   C+ G
Sbjct: 441 KAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYD---ANCFICNVLVSSLCKDG 497

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           K+  A    + + + G +PN  T+  +
Sbjct: 498 KVGVAEYFFHHMSKIGNVPNSITFDCI 524



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 217/431 (50%), Gaps = 41/431 (9%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +     E   + G  G+++   + N L+  L K  +      + K+M++R I  N
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             ++N ++NG  K GK+  A+ I ++M  L + P  VTYN LIDG+C  G      +A  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDG---NFEQALT 329

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + + M   G  PNEV+++ L++G C+      +  + E M  +G+  G + Y ++I+GLC
Sbjct: 330 ILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G L+E+V L D+M+  G+ P+VVT + LINGFC+   ++  + +   + + GL+P+ I
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449

Query: 366 TYNTLIDAYCKEGRMEDAFAMR-----------------------------------NSM 390
            Y TLI  YCK G + +AF +                                    + M
Sbjct: 450 IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHM 509

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G +P+  T++C+I G    GN     ++ +E++  G      TY  L+ ALC+ GK 
Sbjct: 510 SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           K+A  LLD++  +       + VTYN ++    + G L DA  L +E++++ ++P+  TY
Sbjct: 570 KEAKRLLDKLHYIPSA---VDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTY 626

Query: 511 QIVREEMMEKG 521
            I+   ++ +G
Sbjct: 627 AIIFAGLIRRG 637



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 189/408 (46%), Gaps = 7/408 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  +VK  K       F+      L  + ++ N L+     +G FE    + 
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M+    + N  S++ +LNGLC+  K   +  I+E M+  G+    + Y  +IDG C+ 
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN 391

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + +  K   +   M+++G++P+ VTF+ LI+GFC+   I    ++  +M   G+A   
Sbjct: 392 GLLNESVK---LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           + Y +LI   C  G + EA  +   M   G   N    N L++  CK   V  A   F  
Sbjct: 449 IIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHH 508

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S+ G  P+ IT++ +I+ Y   G    AF+M + M+  G  P   TY  L+  L R G 
Sbjct: 509 MSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGK 568

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +  + ++++L         VTYN ++    K G    AV+L DEM    +    P+  T
Sbjct: 569 FKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMV---QRNVLPDSYT 625

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKG 521
           Y ++  G  ++GK+  A      LL KG + P +  Y    + +   G
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAG 673



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 252/530 (47%), Gaps = 55/530 (10%)

Query: 19   HHWSKLKNTDPNTVILQ-LFNSDADPVLILRYFCWSTKELRASH--SLLLTGRLLHSLVV 75
            HH SK+ N  PN++    + N   +    L+ F    + ++A H  S    G LL +L  
Sbjct: 507  HHMSKIGNV-PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 76   AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID-----MLMLAYV--- 127
            A K+ + +  L                H + +  D++  N+I+++     ML  A     
Sbjct: 566  AGKFKEAKRLLDKL-------------HYIPSAVDTVTYNTILVETFKSGMLTDAVALFD 612

Query: 128  ----KNMKPH-----LGFEAFKRAGD-------YG--LKSSVLSCNQLLR-----ALVKE 164
                +N+ P      + F    R G        YG  L    +S  +++       L + 
Sbjct: 613  EMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672

Query: 165  GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVT 223
            G+ +   Y  ++M++  +  +L + N +LNG  + GK+ KA DI   M S + +SP + T
Sbjct: 673  GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLAT 732

Query: 224  YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
            YNIL+ GY KK  + K      ++  M+  GI P+++T ++LI GFCK   +   +K+ +
Sbjct: 733  YNILLHGYAKKKNLSK---CSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLK 789

Query: 284  EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            +M   G+A    T+N LI   C   ++ +A  L + M    + P++ T +++I+   +  
Sbjct: 790  KMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVS 849

Query: 344  LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             V+++ +L  ++ E+G  P    Y  L++  C+ G +  AF +++ M   G+       +
Sbjct: 850  TVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAES 909

Query: 404  CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
             L+ GL++ G VE  + +++ ++   +   + T+  L+   C++    +A+ L D M   
Sbjct: 910  ALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFC 969

Query: 464  EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + +    +++ YNVLI G C  G +  A  L  E+ ++GL PN TTY I+
Sbjct: 970  DVK---LDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCIL 1016



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 175/343 (51%), Gaps = 6/343 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   F+ ++    + G +  A +    M   G +P V T N+L+    K+  +G ++   
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW--- 153

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             FK+M+   + P+  TFN LI+  C +  +  A  + ++M   G    VVTYN+++N  
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+   A+ L D+M + G++ +  T N L++  CK     K  +L   + ++ +SP+ 
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITYN++I+ + KEG++  A  +   M    +LP+  TYN LI G   +GN E    I+  
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G +   V+Y+ L+  LC+  K + + S+L+   +M         + Y  +I G C+
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILE---RMRMNGMIVGCIAYTAMIDGLCR 390

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            G L ++  LL+++L+ G++P+  T+ ++       G I +++
Sbjct: 391 NGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVK 433



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 224/493 (45%), Gaps = 42/493 (8%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LL  ++     P + +F   ++ F + GK  +V  I   +      L  NSII   L+ 
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG--LAPNSIIYTTLIY 456

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K       F+ +      G  ++   CN L+ +L K+GK    EY +  M +     
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------- 237
           N  +F+ ++NG   +G   KA  + ++M   G  P   TY  L+   C+ G         
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576

Query: 238 -------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
                                    G +  A A+F +MV+  +LP+  T+  +  G  + 
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRR 636

Query: 273 ENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             + AA+  +  + G   ++   V Y + ++GL   G+   A+   ++M  +GL  +++ 
Sbjct: 637 GKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696

Query: 332 SNALINGFCKKKLVEKARVLFDDI-SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +N ++NG+ +   + KA  +F  + S   +SPS+ TYN L+  Y K+  +     + N M
Sbjct: 697 TNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIM 756

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +  G+ PD  T + LI G  +   ++    ++ +++ +G+     T+N+L+   C+  + 
Sbjct: 757 MRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEV 816

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            KA  L++ M   +    +P++ T++ +I    +   +++++ LL+E+LE+G IP++  Y
Sbjct: 817 GKAFDLVNIMNLFDI---FPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873

Query: 511 QIVREEMMEKGFI 523
             +   M   G I
Sbjct: 874 IALVNRMCRMGHI 886



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 27/206 (13%)

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGL------------------SPSVITYNTLI 371
           +T++ L+    + +L E A+ +   +S+ G+                  +PSV  ++ LI
Sbjct: 52  ITTHILV----RARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSV--FDLLI 105

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             Y +EG + DA      M  RG  P V T N L+  L +E  V  V     E++   + 
Sbjct: 106 RVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVC 165

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             + T+NIL+  LC +GK KKA  LL    KME+    P++VTYN ++  +C+KG+ + A
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLK---KMEESGYVPSVVTYNTVLNWYCKKGRYKAA 222

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEM 517
             L++++  KG+  +  TY ++ +++
Sbjct: 223 LELIDQMGSKGIEADACTYNMLVDDL 248


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 260/561 (46%), Gaps = 77/561 (13%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L N   +P   L +F + +K+     ++    +L+H L   + Y + R++L+  V   KF
Sbjct: 41  LRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKF 100

Query: 96  TSV-STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
               + I+  L         +  + DM++  YV+          F   G  G   S+ SC
Sbjct: 101 KDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSC 160

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  LVK G+     YVY++M R  I  ++   + ++N  CK GK+++A+  ++ M++
Sbjct: 161 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 220

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           LGV P +VTY+ LI+GY     +G +  A  V K M E G+  N VT+  LI G+CK   
Sbjct: 221 LGVEPNIVTYHSLINGYVS---LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 277

Query: 275 ISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +  A KV   M     +      Y  LI+G C  GK+D+AV L DEM+  GLK N+   N
Sbjct: 278 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 337

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +LING+CK+  + +A  +   + +  L P   +YNTL+D YC+EG   +AF + + ML  
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 397

Query: 394 GVLPDVSTYNCLIAGLSREG-----------------------------------NVEGV 418
           G+ P V TYN L+ GL R G                                   N EG 
Sbjct: 398 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 457

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------------ 460
             +  +++  G     +T+N ++  LCK GK  +A  + D+M                  
Sbjct: 458 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517

Query: 461 ----------FK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                     FK    ME+E   P+I  YN LI G  +  +L +   LL E+  +GL PN
Sbjct: 518 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 577

Query: 507 QTTYQIV-----REEMMEKGF 522
             TY  +     +E M++K F
Sbjct: 578 IVTYGALIDGWCKEGMLDKAF 598



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 223/433 (51%), Gaps = 54/433 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +VL+ N LL+ L + G F+D   ++  M +R +  +   ++ +L+GL K      A
Sbjct: 398 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 457

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S + +D+ + G +   +T+N +I G CK   +GKM +A+ +F  M + G  P+ +T+ TL
Sbjct: 458 STLWKDILARGFTKSRITFNTMISGLCK---MGKMVEAEEIFDKMKDLGCSPDGITYRTL 514

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK  N+  A KV   M    I+  +  YNSLI+GL    +L E   L  EM   GL
Sbjct: 515 IDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGL 574

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+VT  ALI+G+CK+ +++KA   + +++E GLS ++I  +T++    + GR+++A  
Sbjct: 575 TPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANL 634

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+D G  PD   + C +    R   ++ + + ++E     +    + YNI +  LC
Sbjct: 635 LMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 691

Query: 446 KDGK---SKKAVSLL-------------------------DEMFKMEKEKKW----PNIV 473
           K GK   +++  S+L                         DE F++  E       PNIV
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 751

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEM 517
           TYN LI G C+   ++ A  L ++L +KGL PN  TY                  ++++M
Sbjct: 752 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811

Query: 518 MEKGFIPDIEGHM 530
           +E+G  P I+ ++
Sbjct: 812 IEEGISPSIQCNL 824



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 204/411 (49%), Gaps = 38/411 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    +  + LL  L K   FE    ++K++  R    +  +FN +++GLCK GK+ +A
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I + MK LG SP  +TY  LIDGYCK   +G+ +K       M    I P+   +N+L
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA---MEREPISPSIEMYNSL 549

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  K   +     +  EMG  G+   +VTY +LI+G C +G LD+A +   EM  +GL
Sbjct: 550 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-------------------------- 359
             N++  + +++G  +   +++A +L   + + G                          
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 360 ------LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
                 L P+ I YN  I   CK G+++DA    + +  +G +PD  TY  LI G S  G
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           NV+    + +E++  G+   +VTYN L+  LCK     +A  L     K+ ++  +PN+V
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH---KLHQKGLFPNVV 786

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           TYN LI G+C+ G ++ A  L ++++E+G+ P+     +    M   G +P
Sbjct: 787 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNLLESVSMWLVGILP 837



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 242/507 (47%), Gaps = 67/507 (13%)

Query: 78  KYPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML-----AYVKN 129
           + P +RS    L+  VKNG+  +   ++         + R  I+ D+ M+     A+ K+
Sbjct: 153 RIPSLRSCNSLLNNLVKNGETHTAHYVYQ-------QMIRVGIVPDVFMVSIMVNAFCKD 205

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K        K+  + G++ ++++ + L+   V  G  E  + V K M  + +  N+ ++
Sbjct: 206 GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY 265

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGI----------- 237
             ++ G CK  K+++A  ++  M+    + P    Y +LIDGYC+ G I           
Sbjct: 266 TLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 325

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G++++A+ V   MV+  + P+  ++NTL+DG+C++ + S
Sbjct: 326 RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTS 385

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  + ++M   GI   V+TYN+L+ GLC  G  D+A+ +   MM  G+ P+ V  + L+
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G  K +  E A  L+ DI  +G + S IT+NT+I   CK G+M +A  + + M D G  
Sbjct: 446 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 505

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY  LI G  +  NV     +   +    +   +  YN L+  L    KS++ V +
Sbjct: 506 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF---KSRRLVEV 562

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN--------QT 508
            D + +M      PNIVTY  LI G+C++G L+ A     E+ E GL  N          
Sbjct: 563 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 622

Query: 509 TYQIVR--------EEMMEKGFIPDIE 527
            Y++ R        ++M++ GF PD E
Sbjct: 623 LYRLGRIDEANLLMQKMVDHGFFPDHE 649



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 48/435 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK+++  CN L+    K G+  + E V   M    ++ +  S+N +L+G C+ G  ++A
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M   G+ P V+TYN L+ G C+   +G    A  ++  M++ G+ P+EV ++TL
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCR---VGAFDDALQIWHLMMKRGVAPDEVGYSTL 444

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG  K EN   A  +++++ + G     +T+N++I+GLC  GK+ EA  + D+M   G 
Sbjct: 445 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 504

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T   LI+G+CK   V +A  +   +  + +SPS+  YN+LI    K  R+ +   
Sbjct: 505 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 564

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG+ P++ TY  LI G  +EG ++   +   E+  NG+ A ++  + +V  L 
Sbjct: 565 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 624

Query: 446 KDGKSKKAVSLLDEMFK----------MEKEKKW-------------------PNIVTYN 476
           + G+  +A  L+ +M            ++ + ++                   PN + YN
Sbjct: 625 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 684

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEK 520
           + I G C+ GK++DA    + L  KG +P+  TY  +                R+EM+ +
Sbjct: 685 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 744

Query: 521 GFIPDIEGHMYNISG 535
           G +P+I  +   I+G
Sbjct: 745 GLVPNIVTYNALING 759



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 159/328 (48%), Gaps = 64/328 (19%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +  D G     ++   L+    K         V   M+R  I  +++ +N +++GL
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K+ +L + +D++ +M   G++P +VTY  LIDG+CK+G                     
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613

Query: 236 -----------GIGKMYKADAVFKDMVENG------------------------------ 254
                       +G++ +A+ + + MV++G                              
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 673

Query: 255 --ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             +LPN + +N  I G CK   +  A + F  +   G      TY +LI+G    G +DE
Sbjct: 674 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 733

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  LRDEM+  GL PN+VT NALING CK + V++A+ LF  + ++GL P+V+TYNTLID
Sbjct: 734 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
            YCK G M+ AF +++ M++ G+ P + 
Sbjct: 794 GYCKIGNMDAAFKLKDKMIEEGISPSIQ 821



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 2/221 (0%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A+ + D M   G  P++ + N+L+N   K      A  ++  +   G+ P V   
Sbjct: 136 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 195

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +++A+CK+G++++A      M + GV P++ TY+ LI G    G+VE  + ++  +  
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 255

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   +VTY +L+   CK  K  +A  +L  M   E+    P+   Y VLI G+C+ GK
Sbjct: 256 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGK 313

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           ++DA  LL+E+L  GL  N      +     ++G I + EG
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 212/380 (55%), Gaps = 8/380 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  K+  + G K  V++ N ++ +L K+ +  +  Y + EM  + I  N+ +++ +L+
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G+LN+A+ + + M    V P  VT+ IL+DG CK+G I    +A  VF+ M ENG
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI---LEARRVFEMMTENG 311

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+  T++ L+DG+C    +  A K+F+ M   G A  V  YN LING C   +L+EA 
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    L P+ VT + L+ GFC+    + A+ LF ++   GL P  ITY+ L+D  
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G +++AF +  +M +  + P +  YN LI G+   G +E  R + + L   G++  +
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           VTY +++  L K+G S +A     EMF KM      PN  TYNV I+GF + G   +A  
Sbjct: 492 VTYTVMISGLLKEGLSNEAC----EMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVR 547

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L+ E++ +G   + +T+Q++
Sbjct: 548 LIEEMVGRGFSADSSTFQML 567



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 243/466 (52%), Gaps = 22/466 (4%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           +R    +++  +LL SLV  K Y  + S      K    +++    + L+   + LC ++
Sbjct: 63  IRPLPPVVVFNKLLGSLVKKKHYSTVISL----CKQMDLSNIRPNVYTLTILINCLCHSN 118

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
                           H  F A  +    GL+ + ++   LL  L  + K  D   ++ E
Sbjct: 119 ------------RDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE 166

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           + +     +L ++  ++ GLCK G    A  +++ M+  G  P VV YN +ID  CK   
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKD-- 224

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             +  +A   F +MV+ GI PN VT+++++ GFC    ++ A  +F++M    +    VT
Sbjct: 225 -RRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           +  L++GLC +G + EA  + + M  +G++P+  T +AL++G+C +  +++A+ LFD + 
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +G +PSV  YN LI+ +CK  R+ +A  + + M DR + PD  TY+ L+ G  + G  +
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             + +  E+ + G+    +TY+IL+  LCK G   +A  LL     M++ K  P+I  YN
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLK---AMQESKIEPHICIYN 460

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           +LI+G C  GKLE A  L + L  KG+ P+  TY ++   ++++G 
Sbjct: 461 ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 223/418 (53%), Gaps = 20/418 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
              T  + LC  + IID + L              F   G  G   S+++   +++ L K
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKL--------------FDEIGKMGFAPSLITYTTIIKGLCK 188

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G   +   + K+M+ +  + ++ ++N V++ LCK  + N+A     +M   G+ P VVT
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           Y+ ++ G+C    +G++ +A ++FK M+   ++PN VTF  L+DG CK+  I  A +VFE
Sbjct: 249 YSSILHGFCN---LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M  +G+     TY++L++G C+  ++DEA  L D M+  G  P+V   N LING CK +
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            + +A+ L  ++ ++ L+P  +TY+TL+  +C+ GR + A  +   M   G+LPD  TY+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+ GL + G+++    ++  +  + +   +  YNIL+  +C  GK + A  L   +F  
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF-- 483

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             +   P++VTY V+I G  ++G   +A  +  +++  G +PN  TY +  +  +  G
Sbjct: 484 -VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 234/448 (52%), Gaps = 19/448 (4%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS-LCRNSIIIDMLMLAYVKNMKPHLGFE 137
           +PK RSFL    ++   ++ ST   + S+ ++   C N   +  +  A V +    LG  
Sbjct: 6   FPKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADA-VASFNQLLGIR 64

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
                        V+  N+LL +LVK+  +  V  + K+M    I  N+ +   ++N LC
Sbjct: 65  PLP---------PVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLC 115

Query: 198 KAGK--LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            + +  ++ A   +  M  LG+ P  VT+  L++G C K    K+  A  +F ++ + G 
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKA---KIIDAVKLFDEIGKMGF 172

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ +T+ T+I G CK  + + A+++ ++M   G    VV YN++I+ LC D + +EA+ 
Sbjct: 173 APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
              EM+  G+ PNVVT +++++GFC    + +A  LF  +  + + P+ +T+  L+D  C
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           KEG + +A  +   M + GV PD  TY+ L+ G   +  ++  + + + +V  G    + 
Sbjct: 293 KEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVR 352

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YNIL+   CK  +  +A +LL EM+  +     P+ VTY+ L++GFCQ G+ + A  L 
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLT---PDTVTYSTLMQGFCQAGRPQVAQKLF 409

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
            E+   GL+P+  TY I+ + + + G +
Sbjct: 410 KEMCSYGLLPDSITYSILLDGLCKHGHL 437



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 46/370 (12%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A +T  DSLC              K+ + +     F    D G+  +V++ + +L     
Sbjct: 213 AYNTVIDSLC--------------KDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCN 258

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+  +   ++K+M  R +  N  +F  +++GLCK G + +A  + E M   GV P   T
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318

Query: 224 YNILIDGYCKKGG-----------IGKMY---------------------KADAVFKDMV 251
           Y+ L+DGYC +             +GK +                     +A  +  +M 
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +  + P+ VT++TL+ GFC+      A K+F+EM S+G+    +TY+ L++GLC  G LD
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           EA  L   M  S ++P++   N LI G C    +E AR LF ++  +G+ PSV+TY  +I
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
               KEG   +A  M   M+  G LP+  TYN  I G  R G+      ++ E+V  G  
Sbjct: 499 SGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS 558

Query: 432 AGLVTYNILV 441
           A   T+ +L+
Sbjct: 559 ADSSTFQMLL 568



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 3/227 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   SV   N L+    K  +  + + +  EM  R +  +  +++ ++ G C+AG+   A
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M S G+ P  +TY+IL+DG CK G + + ++   + K M E+ I P+   +N L
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR---LLKAMQESKIEPHICIYNIL 462

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C    + AA ++F  +   GI   VVTY  +I+GL  +G  +EA  +  +M+ +G 
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            PN  T N  I GF +      A  L +++  +G S    T+  L+D
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  +++    LM  + +  +P +  + FK    YGL    ++ + LL  L K G  ++  
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + K M+  +IE ++  +N ++ G+C  GKL  A ++  ++   G+ P VVTY ++I G 
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL 501

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVT------------------------------ 261
            K+G   +   A  +F+ MV NG LPN  T                              
Sbjct: 502 LKEGLSNE---ACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS 558

Query: 262 -----FNTLIDGFCKDENISAAMK 280
                F  L+D    DE IS  M+
Sbjct: 559 ADSSTFQMLLDLESNDEIISRFMR 582


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 257/520 (49%), Gaps = 66/520 (12%)

Query: 46  ILRYFCWST---KELRASHSLLLTGRLLHSLVVA------KKYPKIRSFLHMFVKNGKFT 96
           I+  FC +    K L    +LL  G L              K  +I++ LH+  +  K +
Sbjct: 131 IINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK-S 189

Query: 97  SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQ 156
           SV       S   D LC++  + D L L                + G+ G+    ++ N 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLC--------------SQIGERGILLDAVTYNS 235

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+      G++++V  +  +M R  ++ +  +FN +++ LCK G++ +A  ++  M   G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +VTYN L++GYC +  +   ++A  +F  MV+ G+ P+ + +N LIDG+CK + + 
Sbjct: 296 EKPDIVTYNALMEGYCSRENV---HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM---------------- 320
            AM +F+E+ +  +   + +YNSLI+GLC  G++     L DEM                
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 321 -------------------MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
                              M  G+KPN+VT NA+++G+C +  V  A+ +F+ + + GL 
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P ++ YN LI+ YCK   +++A  +   M  + ++PD+++YN LI GL   G +  V+ +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++E+ ++G    ++TYNIL+ A CK     KA+SL    F+   E  WP+  T + ++  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL----FRQIVEGIWPDFYTNHAIVDN 588

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+  KL+ A   L  LL  G  PN  TY I+   + + G
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 241/472 (51%), Gaps = 34/472 (7%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            L   V+ G + +  ++F  L +   S S+   +I+I+     Y         F      
Sbjct: 61  LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN----CYFHQSHTAFAFSLLATI 116

Query: 143 GDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNF--VLNGLCKA 199
              G + ++++ N ++      G  F+ +++    + +  +    D F +  ++NGL K 
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL---FDQFTYGTLINGLSKN 173

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G++  A  ++++M+   V P +V Y+ LIDG CK G +     A  +   + E GIL + 
Sbjct: 174 GQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD---ALGLCSQIGERGILLDA 230

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+N+LIDG C         ++  +M    +     T+N LI+ LC +G++ EA  +   
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G KP++VT NAL+ G+C ++ V +AR LF+ + ++GL P V+ YN LID YCK   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  +   + ++ ++P +++YN LI GL   G +  V+ +++E+  +     +VTYNI
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ ALCK+G+  +A+ +L     M K+   PNIVTYN ++ G+C +  +  A  + N ++
Sbjct: 411 LIDALCKEGRILEALGVL---VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 500 EKGLIPNQTTYQ----------------IVREEMMEKGFIPDIEGHMYNISG 535
           + GL P+   Y                 ++ +EM  K  IPDI  +   I G
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 232/478 (48%), Gaps = 25/478 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +LL ++V    YP   S        G   S++T F  L  C       +    +L     
Sbjct: 60  KLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT-FTILINCYFHQSHTAFAFSLLATILK 118

Query: 128 KNMKPHL--------GF---EAFKRAGDY-------GLKSSVLSCNQLLRALVKEGKFED 169
              +P+L        GF       +A D+       G      +   L+  L K G+ + 
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
             ++ +EM++  ++ NL  ++ +++GLCK G ++ A  +   +   G+    VTYN LID
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C    +G+  +   +   MV   + P++ TFN LID  CK+  I  A  V   M   G
Sbjct: 239 GCC---SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               +VTYN+L+ G C    + EA  L + M+  GL+P+V+  N LI+G+CK K+V++A 
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           VLF ++  + L P++ +YN+LID  C  GR+     + + M      PDV TYN LI  L
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +EG +     ++  ++  G++  +VTYN ++   C       A  + + M K   E   
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE--- 472

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           P+I+ YNVLI G+C+   +++A  L  E+  K LIP+  +Y  + + +   G IP ++
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 188/378 (49%), Gaps = 37/378 (9%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + LM  Y      H   E F R    GL+  VL+ N L+    K    ++   ++KE
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +  + +   + S+N +++GLC +G+++    ++++M      P VVTYNILID  CK+G 
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG- 419

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             ++ +A  V   M++ G+ PN VT+N ++DG+C   N++ A  +F  M   G+   ++ 
Sbjct: 420 --RILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LING C    +DEA+ L  EM    L P++ + N+LI+G C    +   + L D++ 
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD------------------------ 392
           + G SP VITYN L+DA+CK    + A ++   +++                        
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 393 ----------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                      G  P+V TY  LI  L ++G+      +++++ +N      +T+ I++G
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 443 ALCKDGKSKKAVSLLDEM 460
            L +  ++ KA  L +EM
Sbjct: 658 VLLQRNETDKAEKLREEM 675



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 182/349 (52%), Gaps = 6/349 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ +L  + + G    A  +   ++S G+SP + T+ ILI+ Y  +      +   ++  
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAF---SLLA 114

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            ++++G  PN VTFNT+I+GFC +  I  A+   + + + G      TY +LINGL  +G
Sbjct: 115 TILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNG 174

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++  A+ L  EM  S ++PN+V  +ALI+G CK   V  A  L   I E+G+    +TYN
Sbjct: 175 QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +LID  C  GR ++   +   M+   V PD  T+N LI  L +EG +   + ++  +   
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G +  +VTYN L+   C      +A  L + M K   E   P+++ YNVLI G+C+   +
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE---PDVLNYNVLIDGYCKTKMV 351

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           ++A  L  EL  K L+P   +Y  + + +   G I  ++  +  + G++
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 37/326 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK   +  L  ++ S N L+  L   G+   V+ +  EM       ++ ++N +++ LCK
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +A  ++  M   GV P +VTYN ++DGYC +  +     A  +F  MV++G+ P+
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV---AKDIFNRMVKSGLEPD 474

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            + +N LI+G+CK E +  A+ +F+EM    +   + +YNSLI+GLC  G++     L D
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE--------------------- 357
           EM  SG  P+V+T N L++ FCK +  +KA  LF  I E                     
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594

Query: 358 -------------QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
                         G SP+V TY  LI+A CK+G   +A  + + M D    PD  T+  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGM 430
           +I  L +    +    +  E++  G+
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 40/307 (13%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DAV  F  MV     P    F+ L+    +  +   A+ +F ++ S GI+  + T+  LI
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR----------VL 351
           N          A +L   ++ SG +PN+VT N +INGFC   ++ KA            L
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 352 FD-------------------------DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           FD                         ++ +  + P+++ Y+ LID  CK+G + DA  +
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + + +RG+L D  TYN LI G    G  + V  ++ ++V   +     T+NIL+ ALCK
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G+  +A  +L     M K  + P+IVTYN L++G+C +  + +A  L N ++++GL P+
Sbjct: 278 EGRILEAQGVLA---MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 507 QTTYQIV 513
              Y ++
Sbjct: 335 VLNYNVL 341



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 4/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + +M  Y      ++  + F R    GL+  +L+ N L+    K    ++   ++
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM+ + +  ++ S+N +++GLC  G++    +++++M   G SP V+TYNIL+D +CK 
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                  KA ++F+ +VE GI P+  T + ++D  CK E +  A    + +  HG +  V
Sbjct: 559 QPFD---KAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY  LIN LC DG   EA+ L  +M  +   P+ +T   +I    ++   +KA  L ++
Sbjct: 615 QTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREE 674

Query: 355 ISEQGL 360
           +  +GL
Sbjct: 675 MIARGL 680



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ AL KEG+  +   V   M ++ ++ N+ ++N +++G C    +N A DI  
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G+ P ++ YN+LI+GYCK   + +   A  +FK+M    ++P+  ++N+LIDG C
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDE---AIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE----------- 319
               I    ++ +EM   G +  V+TYN L++  C     D+A++L  +           
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYT 581

Query: 320 -----------------------MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
                                  ++  G  PNV T   LIN  CK     +A +L   + 
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +    P  IT+  +I    +    + A  +R  M+ RG++
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 131/259 (50%), Gaps = 3/259 (1%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  N+  A+  F  M           ++ L+  +   G    A++L  ++ + G+ P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   LIN +  +     A  L   I + G  P+++T+NT+I+ +C  G +  A     +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +L +G L D  TY  LI GLS+ G ++   +++ E+  + ++  LV Y+ L+  LCKDG 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A+ L  +   + +     + VTYN LI G C  G+ ++   LL +++ + + P+  T
Sbjct: 211 VSDALGLCSQ---IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 510 YQIVREEMMEKGFIPDIEG 528
           + I+ + + ++G I + +G
Sbjct: 268 FNILIDALCKEGRILEAQG 286


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 208/368 (56%), Gaps = 9/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V + N+LL  L +E + +    V++EM  +  + +  +F  +L GLC++ +L KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  MK +G  P    YN LI GY K    G+ +K      +MV+N  LP  VT+  +
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK---FLAEMVKNHCLPTVVTYTNI 118

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK E    A+K+ +EM   G +  + TYN ++ GLC + KLDEA  + +EM   G 
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N+ I G CK   V++AR     ++   ++P V++Y T+I+  CK G ++ A  
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASR 235

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M + M +RG  PDV TY+ LI G  + G VE    +++ ++  G R  +V YN L+GAL 
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G   KA  +L E   ME+    P++V+YN  I G C+  +++ A  + + ++E+G  P
Sbjct: 296 RLGHIGKAEDMLVE---MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352

Query: 506 NQTTYQIV 513
           N ++Y ++
Sbjct: 353 NASSYSML 360



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 216/413 (52%), Gaps = 37/413 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   ++  L K  +  D   +  EM+ +    N+ ++N ++ GLC+  KL++A  ++
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           E+M   G  P VVTYN  I G CK        + D   K +    + P+ V++ T+I+G 
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCD------RVDEARKFLARMPVTPDVVSYTTVINGL 224

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  ++ +A ++ + M + G    VVTY+SLI+G C  G+++ A+ L D M+  G +PN+
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N+L+    +   + KA  +  ++  +G +P V++YN  ID  CK  R++ A A+ + 
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344

Query: 390 MLDRGVLPDVSTYNCLIA----------GLSREGNVEGVRNIMNELVNNGM-RAGLVTYN 438
           M++RG  P+ S+Y+ LI           GL + G  +    + +++++  +    +  YN
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++ + CK  +  KA+ +  +M     EK   N+VT+N+L+ G C   +L DA  +L  +
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQML----EKNCCNVVTWNILVHGLCVDDRLSDAETMLLTM 460

Query: 499 LEKGLIPNQTTYQIVR----------------EEMMEKGFIPDIEGHMYNISG 535
           +++G IP+  TY  +                 EE ++ G +PD+  +   I+G
Sbjct: 461 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 253/546 (46%), Gaps = 68/546 (12%)

Query: 12  ITELIRNHHWSKLKNTDPNTVILQLFNSDADP-----VLILRYFCWSTKELRASHSLL-- 64
           + +L R H   K      + V  ++ +    P      ++LR  C S  +L  +  LL  
Sbjct: 14  LLQLTREHRHDK-----ASAVFQEMIDKSCQPDAFTFAILLRGLCRSN-QLEKARKLLGR 67

Query: 65  -----------LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
                      +   L+     AK + +   FL   VKN    +V T  + +    D LC
Sbjct: 68  MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV----DGLC 123

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           +     D + L  +  M+            D G   ++ + N ++  L +E K ++ + +
Sbjct: 124 KAERTRDAVKL--LDEMR------------DKGCSPNIYTYNVIVEGLCEERKLDEAKKM 169

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            +EM  R    ++ ++N  + GLCK  ++++A   +  M    V+P VV+Y  +I+G CK
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 226

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G +     A  +   M   G  P+ VT+++LIDGFCK   +  AM + + M   G    
Sbjct: 227 SGDLD---SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 283

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +V YNSL+  L   G + +A  +  EM   G  P+VV+ NA I+G CK + V+KA+ +FD
Sbjct: 284 MVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 343

Query: 354 DISEQGLSPS----------VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL-PDVSTY 402
            + E+G +P+          ++ Y  L+D  CK GR ++A A+ + +LD  +  PDV  Y
Sbjct: 344 RMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFY 403

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++    +   ++    I  +++       +VT+NILV  LC D +   A ++L     
Sbjct: 404 NVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETML---LT 459

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEM 517
           M  E   P+ VTY  L+   C+ GK   A  L  E ++ G +P+  TY      +V E M
Sbjct: 460 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 519

Query: 518 MEKGFI 523
            E+ ++
Sbjct: 520 AEEAYL 525



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 25/337 (7%)

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G    V TYN L+    ++    +  KA AVF++M++    P+  TF  L+ G C+   
Sbjct: 1   MGYEHNVFTYNKLLLQLTREH---RHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQ 57

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A K+   M   G       YN+LI+G        +A     EM+ +   P VVT   
Sbjct: 58  LEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 117

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++G CK +    A  L D++ ++G SP++ TYN +++  C+E ++++A  M   M  RG
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV TYN  I GL +   V+  R  +  +    +   +V+Y  ++  LCK G    A 
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSAS 234

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY---- 510
            +LD    M      P++VTY+ LI GFC+ G++E A GLL+ +L+ G  PN   Y    
Sbjct: 235 RMLDH---MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291

Query: 511 ------------QIVREEMMEKGFIPDIEGHMYNISG 535
                       + +  EM  +GF PD+  +   I G
Sbjct: 292 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 52/377 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N  ++ L K  + ++     K + R  +  ++ S+  V+NGLCK+G L+ A
Sbjct: 177 GYFPDVVTYNSFIKGLCKCDRVDEAR---KFLARMPVTPDVVSYTTVINGLCKSGDLDSA 233

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
           S +++ M + G +P VVTY+ LIDG+CK G +                            
Sbjct: 234 SRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 293

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG---- 289
               G + KA+ +  +M   G  P+ V++N  IDG CK E +  A  VF+ M   G    
Sbjct: 294 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPN 353

Query: 290 ------IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL-KPNVVTSNALINGFCKK 342
                 +   ++ Y  L++GLC  G+ DEA AL  +++   + +P+V   N +++  CK+
Sbjct: 354 ASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 413

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           + ++KA  +   + E+    +V+T+N L+   C + R+ DA  M  +M+D G +PD  TY
Sbjct: 414 RQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+  + + G       +  E V  G    +VTY+ L+  L  +  +++A  L  ++  
Sbjct: 473 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV- 531

Query: 463 MEKEKKW-PNIVTYNVL 478
              E++W P+  T  +L
Sbjct: 532 ---ERRWVPDDKTLGLL 545



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 24/338 (7%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           P + S+   ++   K+G   S S +   +S   C+  +   S +ID     + K  +   
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLID----GFCKGGEVER 267

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
                      G + ++++ N LL AL + G     E +  EM+RR    ++ S+N  ++
Sbjct: 268 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 327

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPK----------VVTYNILIDGYCKKGGIGKMYKAD 244
           GLCKA ++ KA  + + M   G +P           ++ Y +L+DG CK G   +  +A 
Sbjct: 328 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGG---RFDEAC 384

Query: 245 AVFKDMVENGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           A+F  +++  I  P+   +N ++D  CK   I  A+++ ++M        VVT+N L++G
Sbjct: 385 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-CCNVVTWNILVHG 443

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LCVD +L +A  +   M+  G  P+ VT   L++  CK      A  LF++  + G  P 
Sbjct: 444 LCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 503

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           V+TY+ LI     E   E+A+ +   +++R  +PD  T
Sbjct: 504 VVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 236/465 (50%), Gaps = 7/465 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           HS      ++H LV  ++  + ++ +   V+    + V  +   +STC        +I D
Sbjct: 133 HSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCF-YFGSVGLIYD 191

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  YV+  K   G EAF+     G+  S+ +CN+LL  LV+ G  +    +Y E+ R 
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            IELN+ + N ++N LCK  K       + DM+  GV   +VTYN LI+ YC++G + + 
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++   +       G+ P  +T+N ++ G CK      A  V  EM   G+     TYN+L
Sbjct: 312 FQ---LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  +C    + EA  + DEM   G+ P++V+ ++LI    +   + +A + F ++   G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  + Y  LID +C+ G + DA  MR+ ML RG   DV TYN  + GL ++        
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + NE+V  GM     T+  L+   CKDG   KA++L + M +   +   P+ VTYN LI 
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK---PDKVTYNTLID 545

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           GFC+ G++  A  L ++++ K +IP+  +Y  V       G +P+
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 239/463 (51%), Gaps = 86/463 (18%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ + +++ N L+ A  +EG  E+   +      R +E  L ++N +L GLCK GK ++A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
            D++ +M  LG++P   TYN L+   C++  I                            
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G +Y+A   F++M  +GI+P+ V +  LIDGFC++  +S A+K+ +EM + G    
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466

Query: 294 VVTYNSLINGLCV-----------------------------------DGKLDEAVALRD 318
           VVTYN+ +NGLC                                    DG +D+A+ L +
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ + LKP+ VT N LI+GFCK   + +A+ L+DD+  + + P  I+Y T+++ +C  G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            + +A  + + ML++G+ P++ T N LI G  R G++      ++++++NG+     +YN
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+    K+   +KA  L++EM   EK     NI+TYN+++ GFC +GK+++A  +L ++
Sbjct: 647 TLIDGYLKEANLEKAFILINEM---EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703

Query: 499 LEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           +E G+ P+  TY  +                 +EM+++G +PD
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 213/371 (57%), Gaps = 8/371 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F      G+   ++S + L+  L + G        ++EM+R  I  +   +  +++G 
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGI 255
           C+ G L+ A  + ++M + G    VVTYN  ++G CKK    KM+  AD +F +MVE G+
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK----KMFADADMLFNEMVERGM 498

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+  TF TLI G+CKD N+  A+ +FE M    +    VTYN+LI+G C  G++  A  
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L D+M+   + P+ ++   ++NGFC   L+ +A  L D + E+G+ P+++T NTLI  YC
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G M  A+   + M+  G++PD  +YN LI G  +E N+E    ++NE+   G++  ++
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN+++   C +GK ++A  +L +M ++      P+  TY+ LI G   +  +++A    
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGIN---PDGATYSSLINGHVSQDNMKEAFRFH 735

Query: 496 NELLEKGLIPN 506
           +E+L++GL+P+
Sbjct: 736 DEMLQRGLVPD 746


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 258/502 (51%), Gaps = 31/502 (6%)

Query: 52  WSTKELRASHSLL-LTGRLLHSLVVAKKYPKIRS-FLHMFVKNGKFTSVSTIFHALSTCS 109
           W+   L  S+S      RL+++       P +   F  + V+ G        F  L    
Sbjct: 10  WAKPNLDISNSFTHFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYG 69

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLG--FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
            +L   S  + +  L+  ++M   LG   + F      G+  +  S N L+ +L + GK 
Sbjct: 70  VALSAGSCNLYLTCLSSKRDM---LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKI 126

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            +  ++   M+ +    ++ S+  +++G C  G+L K   ++++M+  G+ P + TY+ +
Sbjct: 127 REAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSI 186

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I   CK G   K+ + + V ++M++ G+ P+ V + TLIDGFCK  N  AA K+F EM +
Sbjct: 187 ILLLCKSG---KVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEA 243

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
             I    + +++LI GL   GK+ EA  L +EM+  G +P+ VT  ALI+G+CK   ++K
Sbjct: 244 REIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKK 303

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L + + + GL+P+V+TY  L D  CK G ++ A  + + M  +G+  ++STYN ++ 
Sbjct: 304 AFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVN 363

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL + GN+     +M E+   G+    +TY  L+ A  K G+  KA  LL EM     + 
Sbjct: 364 GLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQ- 422

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------- 516
             P +VT+NVL+ G C  GKLED   LL  +LEKG++PN  TY  + ++           
Sbjct: 423 --PTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 517 -----MMEKGFIPDIEGHMYNI 533
                M  +G +PD   + YNI
Sbjct: 481 EIYRGMCAQGVVPD--SNTYNI 500



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 222/451 (49%), Gaps = 42/451 (9%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           G    V + F  L  C ++   N ++  +  L  ++     L    FK     G    V+
Sbjct: 92  GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFK-----GCIPDVV 146

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S   ++      G+ + V  + KEM+ + ++ NL +++ ++  LCK+GK+ +   ++ +M
Sbjct: 147 SYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM 206

Query: 213 KSLGVSPKVVTYNILIDGYCKKG--------------------------------GIGKM 240
              GV P  V Y  LIDG+CK G                                G GK+
Sbjct: 207 MKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKV 266

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +AD +F +M++ G  P+EVT+  LIDG+CK   +  A  +  +M   G+   VVTY +L
Sbjct: 267 VEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTAL 326

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
            +GLC  G+LD A  L  EM   GL+ N+ T N ++NG CK   + +A  L +++ E GL
Sbjct: 327 ADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGL 386

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TL+DAY K G M  A  +   MLDRG+ P V T+N L+ GL   G +E    
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGER 446

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLI 479
           ++  ++  G+     TYN ++   C     +  + +  E+++ M  +   P+  TYN+LI
Sbjct: 447 LLKWMLEKGIMPNAATYNSIMKQYC----IRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           KG C+   +++A  L  E++EK      ++Y
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSY 533



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 6/390 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +I   L+  + K       ++ F       +    ++ + L+  L   GK  + + ++
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM ++  E +  ++  +++G CK G++ KA  +   M  +G++P VVTY  L DG CK 
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   ++  A+ +  +M   G+  N  T+NT+++G CK  NI  A+K+ EEM   G+    
Sbjct: 334 G---ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY +L++     G++ +A  L  EM+  GL+P VVT N L+NG C    +E    L   
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G+ P+  TYN+++  YC    M  +  +   M  +GV+PD +TYN LI G  +  N
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +  E+V         +YN L+    K  K  +A  L +E   M +E    +   
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEE---MRREGLVASAEI 567

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           YN+ +    ++G +E    L +E +EK L+
Sbjct: 568 YNLFVDMNYEEGNMETTLELCDEAIEKCLL 597


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 226/435 (51%), Gaps = 49/435 (11%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  +    K       F +    GL   V++ N LL  L  E +  +   ++ +M   
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
               N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CKKG     
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 238 ------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLID 267
                                         G+   A  +F +M E GI P+  T+N++I 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +T +++I+GFCK+  ++ A  +F  ++ +G SP++IT+NTLID YC   R++D   + 
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M + G++ D +TYN LI G    G++    +++ E++++G+   +VT + L+  LC +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 448 GKSKKAVSLLDEMFK-MEKEKK-----------WPNIVTYNVLIKGFCQKGKLEDANGLL 495
           GK K A+    EMFK M+K KK            P++ TYN+LI G   +GK  +A  L 
Sbjct: 479 GKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 496 NELLEKGLIPNQTTY 510
            E+  +G++P+  TY
Sbjct: 535 EEMPHRGIVPDTITY 549



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 217/398 (54%), Gaps = 33/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L K+G+  D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             +SP VVTYN LI+ + K+G   K ++A+ ++ +M+  GI+PN +T++++IDGFCK   
Sbjct: 319 RKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  +F  M + G +  ++T+N+LI+G C   ++D+ + L  EM  +GL  +  T N 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM---- 390
           LI+GF     +  A  L  ++   GL P ++T +TL+D  C  G+++DA  M   M    
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 391 --LD-----RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             LD      GV PDV TYN LI+GL  EG       +  E+ + G+    +TY+ ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  +  +A  + D    M  +   PN+VT+  LI G+C+ G+++D   L  E+  +G+
Sbjct: 556 LCKQSRLDEATQMFD---SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
           + N  TY                  + +EM+  G  PD
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 206/395 (52%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SF  ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+N L+ G C +    ++ +A  +F  M E    PN VTF TL++G 
Sbjct: 138 GKITKLGLHPDVVTFNTLLHGLCVE---DRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TY+ ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    + MF +   K   PN++T+N LI G+C   +++D   LL+E+ E GL+ + 
Sbjct: 375 RLDAA----EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
           TTY                  + +EM+  G  PDI
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ ++M   G+ P  +TY+ +IDG+CK+    ++  A+ +F  M   G  PN
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ---NRLDAAEHMFYLMATKGCSPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TFNTLIDG+C  + I   M++  EM   G+ A   TYN+LI+G  + G L+ A+ L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           EM++SGL P++VT + L++G C    ++ A  +F  + +            G+ P V TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    + + + +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+  L+   CK G+    + L  E   M +     N +TY  LI GF + G 
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCE---MGRRGIVANAITYITLICGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           +  A  +  E++  G+ P+  T +
Sbjct: 632 INGALDIFQEMISSGVYPDTITIR 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 192/357 (53%), Gaps = 43/357 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  N  +++ +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------- 237
            +   M + G SP ++T+N LIDGYC    I                             
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 238 ---GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------G 286
              G +  A  + ++M+ +G+ P+ VT +TL+DG C +  +  A+++F+ M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 287 SH---GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           SH   G+   V TYN LI+GL  +GK  EA  L +EM   G+ P+ +T +++I+G CK+ 
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  +FD +  +  SP+V+T+ TLI+ YCK GR++D   +   M  RG++ +  TY 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            LI G  + GN+ G  +I  E++++G+    +T   ++  L    + K+AV++L+++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 14/339 (4%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDMVENGILPN 258
           L  A D+  DM      P VV +  L+      G + +M + D V   ++ M    I  +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             +F  LI  FC    +  A+  F ++   G+   VVT+N+L++GLCV+ ++ EA+ L  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T++D  CK+G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 379 RMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
               A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G+   L TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  +A  L +E
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           +L +G+IPN  TY  + +   ++  + D   HM+ +  T
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 388



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 18/278 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ +   LI  FC    +  A   F  I++ GL P V+T+NTL+   C E R+ +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M   E     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+ 
Sbjct: 230 CKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           P+  TY                + + +EM+E+   PD+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 16/251 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H F   G   +   +   +   S  LC + +  D L+     N K     E FK   
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 144 DY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                        G++  V + N L+  L+ EGKF + E +Y+EM  R I  +  +++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCK  +L++A+ + + M S   SP VVT+  LI+GYCK G +    +   +F +M  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR 609

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI+ N +T+ TLI GF K  NI+ A+ +F+EM S G+    +T  +++ GL    +L  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 313 AVALRDEMMAS 323
           AVA+ +++  S
Sbjct: 670 AVAMLEKLQMS 680


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 226/435 (51%), Gaps = 49/435 (11%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  +    K       F +    GL   V++ N LL  L  E +  +   ++ +M   
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
               N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CKKG     
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 238 ------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLID 267
                                         G+   A  +F +M E GI P+  T+N++I 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +T +++I+GFCK+  ++ A  +F  ++ +G SP++IT+NTLID YC   R++D   + 
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M + G++ D +TYN LI G    G++    +++ E++++G+   +VT + L+  LC +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 448 GKSKKAVSLLDEMFK-MEKEKK-----------WPNIVTYNVLIKGFCQKGKLEDANGLL 495
           GK K A+    EMFK M+K KK            P++ TYN+LI G   +GK  +A  L 
Sbjct: 479 GKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 496 NELLEKGLIPNQTTY 510
            E+  +G++P+  TY
Sbjct: 535 EEMPHRGIVPDTITY 549



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 217/398 (54%), Gaps = 33/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L K+G+  D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             +SP VVTYN LI+ + K+G   K ++A+ ++ +M+  GI+PN +T++++IDGFCK   
Sbjct: 319 RKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  +F  M + G +  ++T+N+LI+G C   ++D+ + L  EM  +GL  +  T N 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM---- 390
           LI+GF     +  A  L  ++   GL P ++T +TL+D  C  G+++DA  M   M    
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 391 --LD-----RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             LD      GV PDV TYN LI+GL  EG       +  E+ + G+    +TY+ ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  +  +A  + D    M  +   PN+VT+  LI G+C+ G+++D   L  E+  +G+
Sbjct: 556 LCKQSRLDEATQMFD---SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
           + N  TY                  + +EM+  G  PD
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 206/395 (52%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SF  ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+N L+ G C +    ++ +A  +F  M E    PN VTF TL++G 
Sbjct: 138 GKLTKLGLHPDVVTFNTLLHGLCVE---DRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TY+ ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    + MF +   K   PN++T+N LI G+C   +++D   LL+E+ E GL+ + 
Sbjct: 375 RLDAA----EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
           TTY                  + +EM+  G  PDI
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ ++M   G+ P  +TY+ +IDG+CK+    ++  A+ +F  M   G  PN
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ---NRLDAAEHMFYLMATKGCSPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TFNTLIDG+C  + I   M++  EM   G+ A   TYN+LI+G  + G L+ A+ L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           EM++SGL P++VT + L++G C    ++ A  +F  + +            G+ P V TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    + + + +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+  L+   CK G+    + L  E   M +     N +TY  LI GF + G 
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCE---MGRRGIVANAITYITLICGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           +  A  +  E++  G+ P+  T +
Sbjct: 632 INGALDIFQEMISSGVYPDTITIR 655



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 192/357 (53%), Gaps = 43/357 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  N  +++ +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------- 237
            +   M + G SP ++T+N LIDGYC    I                             
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 238 ---GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------G 286
              G +  A  + ++M+ +G+ P+ VT +TL+DG C +  +  A+++F+ M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 287 SH---GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           SH   G+   V TYN LI+GL  +GK  EA  L +EM   G+ P+ +T +++I+G CK+ 
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  +FD +  +  SP+V+T+ TLI+ YCK GR++D   +   M  RG++ +  TY 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            LI G  + GN+ G  +I  E++++G+    +T   ++  L    + K+AV++L+++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 14/339 (4%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDMVENGILPN 258
           L  A D+  DM      P VV +  L+      G + +M + D V   ++ M    I  +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             +F  LI  FC    +  A+  F ++   G+   VVT+N+L++GLCV+ ++ EA+ L  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T++D  CK+G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 379 RMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
               A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G+   L TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  +A  L +E
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           +L +G+IPN  TY  + +   ++  + D   HM+ +  T
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 388



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 18/278 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ +   LI  FC    +  A   F  +++ GL P V+T+NTL+   C E R+ +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M   E     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+ 
Sbjct: 230 CKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           P+  TY                + + +EM+E+   PD+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 14/226 (6%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY-----------GLKSSVLSCNQL 157
           S  LC + +  D L+     N K     E FK                G++  V + N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +  L+ EGKF + E +Y+EM  R I  +  +++ +++GLCK  +L++A+ + + M S   
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP VVT+  LI+GYCK G +    +   +F +M   GI+ N +T+ TLI GF K  NI+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGRRGIVANAITYITLICGFRKVGNING 634

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           A+ +F+EM S G+    +T  +++ GL    +L  AVA+ +++  S
Sbjct: 635 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/423 (33%), Positives = 224/423 (52%), Gaps = 8/423 (1%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           + + +   TS    F   S  SD +  N    ++L+ A              +     G 
Sbjct: 164 LALSDASLTSARRFFD--SMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGC 221

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
             +V++ N L+ A  + G+ +  E +   M+   ++ NL +FN ++NG+CKAGK+  A  
Sbjct: 222 GPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARK 281

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           + ++M   G++P  V+YN L+ GYCK G     ++A +VF +M + GI+P+ VTF +LI 
Sbjct: 282 VFDEMVREGLAPDGVSYNTLVGGYCKAGC---SHEALSVFAEMTQKGIMPDVVTFTSLIH 338

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             CK  N+  A+ +  +M   G+    VT+ +LI+G C  G LD+A+     M    +KP
Sbjct: 339 VMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VV  NALING+C    +++AR L  ++  +GL P V+TY+T+I AYCK      AF + 
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ML++GVLPD  TY+ LI  L  E  +     +   ++  G++    TY  L+   CK+
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G  + A+SL D   KM K    P++VTY+VLI G  +  +  +A  LL +L  +  IP  
Sbjct: 519 GNVESALSLHD---KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN 575

Query: 508 TTY 510
           T Y
Sbjct: 576 TKY 578



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/448 (31%), Positives = 222/448 (49%), Gaps = 67/448 (14%)

Query: 138 AFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AF RAG+              GLK ++++ N ++  + K GK ED   V+ EM R  +  
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  S+N ++ G CKAG  ++A  +  +M   G+ P VVT+  LI   CK G    + +A 
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG---NLERAV 350

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M E G+  NEVTF  LIDGFCK   +  A+     M    I   VV YN+LING 
Sbjct: 351 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGY 410

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK-----------KKLVEK------ 347
           C+ G++DEA  L  EM A GLKP+VVT + +I+ +CK           ++++EK      
Sbjct: 411 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 470

Query: 348 ------------------ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                             A VLF ++ + GL P   TY +LID +CKEG +E A ++ + 
Sbjct: 471 ITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+  GVLPDV TY+ LI GLS+       + ++ +L +         Y+ L+   C+  +
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC-CRKAE 589

Query: 450 SKKAVSLL------------DEMFKMEKEKKWPNI--VTYNVLIKGFCQKGKLEDANGLL 495
            K  ++LL            D++++   ++ W N+    Y+VLI G C+ G +  A    
Sbjct: 590 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNW-NLDGSVYSVLIHGHCRAGNVMKALSFH 648

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
            ++L+ G  PN T+   +   + E G +
Sbjct: 649 KQMLQGGFAPNSTSTISLIRGLFENGMV 676



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 163/334 (48%), Gaps = 53/334 (15%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL+ + ++   L+    K+G  +D     + MK+ RI+ ++  +N ++NG C  G+++
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A +++ +M++ G+ P VVTY+ +I  YCK       ++ +   + M+E G+LP+ +T++
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN---QQMLEKGVLPDAITYS 474

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI   C ++ +S A  +F+ M   G+     TY SLI+G C +G ++ A++L D+M+ +
Sbjct: 475 SLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534

Query: 324 GLKPNVVTSNALING--------------------------------------------- 338
           G+ P+VVT + LING                                             
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594

Query: 339 -----FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
                FC K L+ +A  ++  + ++  +     Y+ LI  +C+ G +  A +    ML  
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           G  P+ ++   LI GL   G V     ++ +L+N
Sbjct: 655 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 688



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 4/198 (2%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+V+  NA++       L   AR  FD +   G++P+V TYN L+ A C  G  ++A
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            ++   M   G  P+V TYN L+A   R G V+G   ++  +   G++  LVT+N +V  
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +CK GK + A  + DEM +   E   P+ V+YN L+ G+C+ G   +A  +  E+ +KG+
Sbjct: 270 MCKAGKMEDARKVFDEMVR---EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 504 IPNQTTYQIVREEMMEKG 521
           +P+  T+  +   M + G
Sbjct: 327 MPDVVTFTSLIHVMCKAG 344



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 22/155 (14%)

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G +P V  YN ++  LS + ++   R   + ++++G+   + TYNILV ALC  G  K+A
Sbjct: 151 GYVPSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--- 510
           +S+L +M         PN+VTYN L+  F + G+++ A  L+  + E GL PN  T+   
Sbjct: 210 LSILRDM---RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266

Query: 511 -------------QIVREEMMEKGFIPDIEGHMYN 532
                        + V +EM+ +G  PD  G  YN
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPD--GVSYN 299



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 49/318 (15%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           G+      + H +   +  L  + +    ++ AY KN   H  FE  ++  + G+    +
Sbjct: 414 GRMDEARELLHEME--AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 471

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           + + L+R L  E +  D   ++K M +  ++ +  ++  +++G CK G +  A  + + M
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKM 531

Query: 213 KSLGVSPKVVTYNILIDGY----------------------------------CKKGGI- 237
              GV P VVTY++LI+G                                   C+K  + 
Sbjct: 532 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELK 591

Query: 238 ------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
                       G M +AD V++ M++     +   ++ LI G C+  N+  A+   ++M
Sbjct: 592 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G A    +  SLI GL  +G + EA  +  +++      +   S ALI+    +  V
Sbjct: 652 LQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNV 711

Query: 346 EKARVLFDDISEQGLSPS 363
           +    +   +++ GL PS
Sbjct: 712 DAVLDVLHGMAKDGLLPS 729


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 244/454 (53%), Gaps = 17/454 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L  F + G+       F  +   S +L  N  +  +L+    K  +       F+   
Sbjct: 14  ALLRGFCRGGEIDQAQRCFDEMR--SKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+ +  +    LL  L KE + +    +  EM+    E N+ ++N +++GLCK  + +
Sbjct: 72  GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-------NGIL 256
           +A ++ E MKS+  SP +VTYN L+DG  + G   K+ +A A+F++M++       +   
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTG---KLERAMALFQEMLDRRSHDMDDRCS 188

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN +T++ LIDG CK   +S A+++ E M + G +  V+TY  L++GLC + K+  A  +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+ +G  PN+VT N+L++G C+ + V  A  L  D++ +G +P+V+TY TLID  CK
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR++DA AM   M+D+G  PD+  YN LI GL +   V+    ++   V+ G++  +VT
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y+ ++  LC+  +  +A  LL     ++     P+++ Y+ LI G C+ GK+++A  L  
Sbjct: 369 YSSVIYGLCRSNRLDEACRLL---LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
            +   G   +  TY  + + + + G +   E H+
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVD--EAHL 457



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 243/515 (47%), Gaps = 92/515 (17%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           + L    K  +      I H +    D  C  N +  + L+    KN +P    E F+  
Sbjct: 84  ALLSGLWKEKRLDQALAILHEMR---DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-------IELNLDSFNFVLNG 195
                  S+++ N LL  L + GK E    +++EM  RR          N+ +++ +++G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCKA ++++A +++E MK+ G SP V+TY IL+DG CK+  +   ++   V ++M++ G 
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE---VLREMLDAGC 257

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY------------------ 297
           +PN VT+N+L+ G C+   +S A+ +  +M   G    VVTY                  
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317

Query: 298 -----------------NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
                            N LINGLC   ++DE++AL    ++ G+KP+VVT +++I G C
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           +   +++A  L   +  +G  P VI Y+TLID  CK G++++AF +   M   G   DV 
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY+ LI GL + G V+    ++  +V  G     +TYN L+  LC      +A+ L++EM
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497

Query: 461 FKMEKEKKWPNIVTYNVLIKG--------------------------------------- 481
              E+    P+ VTYN+LI G                                       
Sbjct: 498 ---ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLID 554

Query: 482 -FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             C+ G++ +A     E+++ G+IP+  TY I+ E
Sbjct: 555 GLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 169/315 (53%), Gaps = 13/315 (4%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P V TY  L+ G+C+ G I    +A   F +M    ++PN    + LIDG CK +    
Sbjct: 6   QPDVYTYAALLRGFCRGGEID---QAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A++ F  M   GI A  V Y +L++GL  + +LD+A+A+  EM   G +PNVVT N+LI+
Sbjct: 63  ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR---- 393
           G CK    ++A+ LF+ +     SPS++TYNTL+D   + G++E A A+   MLDR    
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182

Query: 394 ---GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
                 P+V TY+ LI GL +   V     ++  +   G    ++TY ILV  LCK+ K 
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  +L EM         PN+VTYN L+ G C+  ++ DA  L+ ++  +G  PN  TY
Sbjct: 243 AAAWEVLREML---DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299

Query: 511 QIVREEMMEKGFIPD 525
             + + + + G + D
Sbjct: 300 GTLIDGLCKVGRVKD 314



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 188/397 (47%), Gaps = 48/397 (12%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS  +   +I++D L     K  K    +E  +   D G   ++++ N LL  L +  + 
Sbjct: 222 CSPDVITYTILVDGL----CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRV 277

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            D   + ++M  R    N+ ++  +++GLCK G++  A  ++ DM   G +P ++ YN+L
Sbjct: 278 SDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 337

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN------------------------ 263
           I+G CK   + +   + A+ +  V  GI P+ VT++                        
Sbjct: 338 INGLCKADQVDE---SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394

Query: 264 -----------TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
                      TLIDG CK   +  A  ++E M   G  A VVTY++LI+GLC  G++DE
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M+  G  P+ +T N+LI G C    +++A  L +++     +PS +TYN LI 
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 514

Query: 373 AYCKEGRMEDAFAMRNSMLDR-----GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             C+  R++ A  +      R     G   D   Y+ LI GL + G V    +   E+++
Sbjct: 515 GMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMID 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSL-LDEMFKM 463
           NG+    +TY+IL+  L K     +   L LD+M ++
Sbjct: 575 NGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 611



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 162/294 (55%), Gaps = 9/294 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    ++  N L+  L K  + ++   + +      I+ ++ +++ V+ GLC++ +L+
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 383

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++  +KS G  P V+ Y+ LIDG CK G + + +    +++ M  +G   + VT++
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD---LYEVMAGDGCDADVVTYS 440

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLIDG CK   +  A  +   M   G     +TYNSLI GLC    LDEA+ L +EM  S
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 500

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDD-----ISEQGLSPSVITYNTLIDAYCKEG 378
              P+ VT N LI+G C+ + V+ A VL +      ++  G +   I Y++LID  CK G
Sbjct: 501 NCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAG 560

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN-IMNELVNNGMR 431
           R+ +A      M+D GV+PD  TY+ L+ GL +  ++  +R+ +++++V  G R
Sbjct: 561 RVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 20/253 (7%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V TY +L+ G C  G++D+A    DEM +  L PNV   + LI+G CK K    A   F 
Sbjct: 9   VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +   G+    + Y  L+    KE R++ A A+ + M D G  P+V TYN LI GL +  
Sbjct: 69  AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK----EKKW 469
             +  + +   + +      +VTYN L+  L + GK ++A++L  EM         ++  
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------V 513
           PN++TY+VLI G C+  ++  A  LL  +  +G  P+  TY I                V
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 514 REEMMEKGFIPDI 526
             EM++ G +P++
Sbjct: 249 LREMLDAGCVPNL 261


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 216/378 (57%), Gaps = 8/378 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G E F+     G    V++ N L+ +L K G  E+   ++  M  R    N+ +++ ++N
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159

Query: 195 GLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           GLCK G++++A +++++M  KS  V P ++TYN  +DG CK+    +  +     +D   
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             + P+ VTF+TLIDG CK      A    ++M + G    VVTYN+L+NGLC   K++ 
Sbjct: 220 R-VSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A A+ + M+  G+ P+V+T + L++ FCK   V++A  L   ++ +G +P+V+T+N++ID
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK  R  +AF +   + +R ++PD  T+N LIAG  + GN E    +  E+V   M+ 
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++T+  L+  LCK G+ + A  +LD M  +      PN+VTYNVL+ G C+ G++E+  
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP---PNVVTYNVLVHGLCKSGRIEEPC 453

Query: 493 GLLNELLEKGLIPNQTTY 510
             L E++  G +P   TY
Sbjct: 454 EFLEEMVSSGCVPESMTY 471



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 180/322 (55%), Gaps = 17/322 (5%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFK-DMVENGILPNEVTFNTLIDGFCKDENIS 276
           S  V  YNI++   C+ G   +  +A  +F+ +M  +G+ P  VT+NT+I+G CK   + 
Sbjct: 42  SRSVADYNIVLQSLCRAG---ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           A M++FEE+   G    VVTYN+LI+ LC  G L+EA  L   M + G  PNVVT + LI
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 337 NGFCKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           NG CK   +++AR L  +++ +     P++ITYN+ +D  CK+    +A  +  S+ D  
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 218

Query: 395 --VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             V PD  T++ LI GL + G  +   N  ++++  G    +VTYN LV  LCK  K ++
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A ++++ M     +   P+++TY+VL+  FC+  ++++A  LL+ +  +G  PN  T+  
Sbjct: 277 AHAMIESMV---DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333

Query: 513 VREEMMEKGFIPDIEGHMYNIS 534
           + + + +     D  G  + I+
Sbjct: 334 IIDGLCKS----DRSGEAFQIA 351



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 169/313 (53%), Gaps = 5/313 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++ N L+  L K  K E    + + M  + +  ++ +++ +++  CKA ++++A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGILPNEVTFNT 264
            +++  M S G +P VVT+N +IDG CK    G+ ++ A  V+  M    ++P++VTFN 
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNI 368

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G CK  N   A  +FEEM +  +   V+T+ +LI+GLC  G+++ A  + D M   G
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 428

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PNVVT N L++G CK   +E+     +++   G  P  +TY +L+ A C+  R +DA 
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + +   G  PD  TYN L+ GL + G  E    ++ E+V  G +    T+    G L
Sbjct: 489 QLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGL 548

Query: 445 CKDGKSKKAVSLL 457
            + G     + LL
Sbjct: 549 HRSGNLAGTMELL 561



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 23/350 (6%)

Query: 97  SVSTIFHALSTC--SDSLCRNSIIIDMLMLAYVKNMKPHLGF-------EAFKRAG---- 143
           + ST+   L  C  +D  C +    DM+   YV N+  +          +  +RA     
Sbjct: 227 TFSTLIDGLCKCGQTDEACND----DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 144 ---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
              D G+   V++ + L+ A  K  + ++   +   M  R    N+ +FN +++GLCK+ 
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +  +A  I   + +  + P  VT+NILI G CK G      +A A+F++MV   + P+ +
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAG---NFEQASALFEEMVAKNMQPDVM 399

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF  LIDG CK   + AA  + + MG+ G+   VVTYN L++GLC  G+++E     +EM
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++SG  P  +T  +L+   C+    + A  L   +   G  P  +TYN L+D   K G+ 
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           E A  +   M+ +G  PD  T+     GL R GN+ G   ++  ++  GM
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGM 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 3/290 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I   +L+ A+ K  +     E        G   +V++ N ++  L K  +  +   +  +
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ 353

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +  R +  +  +FN ++ G CKAG   +AS + E+M +  + P V+T+  LIDG CK G 
Sbjct: 354 VYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG- 412

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             ++  A  +   M   G+ PN VT+N L+ G CK   I    +  EEM S G     +T
Sbjct: 413 --QVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y SL+  LC   + D+A+ L  ++ + G  P+ VT N L++G  K    E+A  + +++ 
Sbjct: 471 YGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            +G  P   T+        + G +     +   +L +G+LPD +T + ++
Sbjct: 531 GKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           ++ S+V     P + ++   +  F K  +      + H +++  C+ ++   + IID L 
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            +        +  + + R     L    ++ N L+    K G FE    +++EM  + ++
Sbjct: 340 KSDRSGEAFQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ +F  +++GLCKAG++  A DI++ M +LGV P VVTYN+L+ G CK G   ++ + 
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG---RIEEP 452

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
               ++MV +G +P  +T+ +L+   C+      A+++  ++ S G     VTYN L++G
Sbjct: 453 CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG 512

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           L   GK ++A+ + +EM+  G +P+  T  A   G  +   +     L   +  +G+ P 
Sbjct: 513 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPD 572

Query: 364 VITYNTLID 372
             T ++++D
Sbjct: 573 ATTCSSILD 581


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 262/565 (46%), Gaps = 62/565 (10%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDP--------------NTVILQLFNSDADPVLI 46
           P       I DIT +I      KL+ ++P              + +I  L N   D  L+
Sbjct: 66  PTIRDTELIHDITAVI------KLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLV 119

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF---TSVSTIFH 103
           L +F W+   +R   SL     ++H  VV+         +H +  N K      ++   H
Sbjct: 120 LAFFDWA--RVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTH 177

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
            L         N I  D+     V+        +   +   YGL  +V SCN  L  +  
Sbjct: 178 RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN 237

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
               E +E   K      I  N  S+N ++  LC+ GK+ +A  ++  M     +P VV+
Sbjct: 238 NS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295

Query: 224 YNILIDGYCKKG--------------------------------GIGKMYKADAVFKDMV 251
           Y+ +IDGYC  G                                 IGK ++A+ V ++M+
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              I+P+ V + TLI GF K  ++  A K F+EM S  I+   +TY +LI G    GK+ 
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           E   L  EM++ GLKP+ VT   LI+ +CK   +  A  L +++ + G++P+++TY  LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D  CK G ++ A  + + M  +G+  +V  YN ++ G+ + GN+E    +M E+   G+ 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              +TY  ++ A C+ G   KA  LL EM     +   P +VT+NVL+ GFC  G LED 
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ---PTVVTFNVLMNGFCMLGMLEDG 592

Query: 492 NGLLNELLEKGLIPNQTTYQIVREE 516
           + LL  +LEKG++P+  TY  + ++
Sbjct: 593 DRLLGWMLEKGIVPDAITYNTLMKQ 617



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 195/366 (53%), Gaps = 8/366 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K G        + EM  ++I  +  ++  ++ G  + GK+ +  ++  +M S G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P  VTY  LID YCK G   +M  A ++  +MV+ G+ PN VT+  LIDG CK   + 
Sbjct: 429 LKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++ +EM   G+   V  YNS++NG+C  G +++A+ L  EM  +G+ P+ +T   +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + +C+   ++KA  L  ++ ++GL P+V+T+N L++ +C  G +ED   +   ML++G++
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TYN L+       ++     I   + N G+     TYNIL+   CK    K+A  L
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 457 LDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             EM     EK + P + +YN LIK F +K K+ +A  L  E+   GL+ +   Y    +
Sbjct: 666 YKEMI----EKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 516 EMMEKG 521
              E+G
Sbjct: 722 MCYEEG 727



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 173/314 (55%), Gaps = 3/314 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++   L+    K G+  +   ++ EM +  +  N+ ++  +++GLCK G+L+ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           ++++++M+  G+   V  YN +++G CK G I +  K   + K+M   GI P+ +T+ T+
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK---LMKEMEVAGIDPDAITYTTV 544

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +C+  +I  A K+ +EM   G+   VVT+N L+NG C+ G L++   L   M+  G+
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T N L+   C +  +     ++  +  QG++P   TYN LI  +CK   +++A+ 
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+++G +P V++YN LI    ++  +   R +  E+  +G+ A    YN  V    
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 446 KDGKSKKAVSLLDE 459
           ++G  +  ++L DE
Sbjct: 725 EEGDVEITLNLCDE 738



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 5/352 (1%)

Query: 75  VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           ++  Y    + +  F + GK      +FH +   S  L  + +    L+  Y K  +   
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEM--ISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F         G+  ++++   L+  L K G+ +    +  EM+++ ++LN+  +N ++N
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G+CKAG + +A  +M++M+  G+ P  +TY  +ID YC+ G I K +K   + ++M++ G
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK---LLQEMLDRG 568

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P  VTFN L++GFC    +    ++   M   GI    +TYN+L+   C+   ++   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M   G+ P+  T N LI G CK + +++A  L+ ++ E+G  P+V +YN LI  +
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            K+ ++ +A  +   M   G++ D   YN  +     EG+VE   N+ +E +
Sbjct: 689 YKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/439 (33%), Positives = 224/439 (51%), Gaps = 52/439 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  SS ++ N L+    KEG+ E+V     EM       +  +FN ++NGLC+ G +  A
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
            +I++ M   G  P + TYN LI G CK G +                            
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                ++ +A  + + +   GILP+  TFN+LI G C   N   AM++FEEM + G    
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             TYN LI+ LC  G+L+EA++L  EM +SG   NVVT N LI+GFCK K +E+A  +FD
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++  QG+S +V+TYNTLID  CK  R+E+A  + + ML  G+ PD  TYN L+    R G
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++   +I+  + +NG     VTY  L+  L K G+ + A  LL  + +++     P   
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV-QLKGMVLAPQ-- 632

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-----------------E 516
           TYN +IK   ++ +  +A  L  E++EKG  P+  TY++V                   E
Sbjct: 633 TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692

Query: 517 MMEKGFIPDIEGHMYNISG 535
           M +KGF+PD    +    G
Sbjct: 693 MTDKGFLPDFSSFLMLAEG 711



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 225/428 (52%), Gaps = 23/428 (5%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA-------- 142
           K+G F S+  +   +      + R + +I  L+ +Y K       FE F  A        
Sbjct: 117 KDGSFGSMRRVLQEMKHTGCEIRRGTFLI--LIESYAK-------FELFDEAVAVVDIME 167

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            ++GLK    + N LL  LV   K + VE V   M  R I+ ++ +FN ++  LC+A ++
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  +ME+M S G+SP   T+  L+ G+ ++G    M  A  + + MV  G   + VT 
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN---MNGALRIREQMVAAGCPSSNVTV 284

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N L+ G+CK+  I   +   +EM + G      T+NSL+NGLC  G +  A+ + D M+ 
Sbjct: 285 NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ 344

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P++ T N+LI G CK   VE+A  + + +  +  SP+ +TYNTLI   CKE ++E+
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   +  +G+LPDV T+N LI GL    N      +  E+   G      TYN+L+ 
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +LC  G+ ++A+SLL E   ME      N+VTYN LI GFC+  ++E+A  + +E+  +G
Sbjct: 465 SLCSRGRLEEALSLLKE---MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 503 LIPNQTTY 510
           +  N  TY
Sbjct: 522 ISRNVVTY 529



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 236/515 (45%), Gaps = 78/515 (15%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           L+++ W+       H+L      L S    K + K+ SF      + +  +VS  F  LS
Sbjct: 7   LKWYPWT-----PPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQ--AVSPSFSTLS 59

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG---------------LKSSV 151
               +                +N  P    +A +R  D                 + SSV
Sbjct: 60  PSPTT-------------QLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSV 106

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE---------------------------- 183
           +   ++LR L K+G F  +  V +EMK    E                            
Sbjct: 107 IY-EEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDI 165

Query: 184 ------LNLDSF--NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
                 L LD+F  NF+LN L    KL     +   M S G+ P V T+NILI   C+  
Sbjct: 166 MEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAH 225

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            I     A  + ++M   G+ P+E TF TL+ GF ++ N++ A+++ E+M + G  +  V
Sbjct: 226 QI---RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           T N L++G C +G+++E ++  DEM   G +P+  T N+L+NG C+   V+ A  + D +
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            ++G  P + TYN+LI   CK G +E+A  + N M+ R   P+  TYN LI+ L +E  V
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    +   L + G+   + T+N L+  LC     + A+ L +E   M+ +   P+  TY
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE---MKTKGCHPDEFTY 459

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N+LI   C +G+LE+A  LL E+   G   N  TY
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 74/326 (22%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L KE + E+   + + +  + I  ++ +FN ++ GLC       A ++ E+MK+
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P   TYN+LID  C +G   ++ +A ++ K+M  +G   N VT+NTLIDGFCK++ 
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRG---RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM------------- 321
           I  A ++F+EM   GI+  VVTYN+LI+GLC + +++EA  L D+M+             
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 322 ----------------------ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
                                 ++G +P+ VT   LI G  K   VE A  L   +  +G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML---------------------------- 391
           +  +  TYN +I A  +E R  +A  +   M+                            
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEA 686

Query: 392 --------DRGVLPDVSTYNCLIAGL 409
                   D+G LPD S++  L  GL
Sbjct: 687 VDFLVEMTDKGFLPDFSSFLMLAEGL 712



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 8/285 (2%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S    RN +  + L+  + KN +     E F      G+  +V++ N L+  L K  + E
Sbjct: 484 SSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVE 543

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           +   +  +M    ++ +  ++N +L   C+AG + KA+DI++ M S G  P  VTY  LI
Sbjct: 544 EAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G  K    G++  A  + + +   G++    T+N +I    +++  S A+++F EM   
Sbjct: 604 LGLSKA---GRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660

Query: 289 GIAAGVVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
           G     VTY  +  GLC   G + EAV    EM   G  P+  +   L  G C   + + 
Sbjct: 661 GDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDT 720

Query: 348 ARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              L + + +Q   S S +   ++I  + K  + +DA A    +L
Sbjct: 721 LIKLVNRVMKQANFSDSEV---SMIMGFLKIRKFQDALATLGRIL 762



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 20/212 (9%)

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS----------EQGLSPSVITYNTLID 372
           S L P+  T   L   F  K+L +  R   D+ S          +    PS + Y  ++ 
Sbjct: 56  STLSPSPTTQ--LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLR 113

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE---GNVEGVRNIMNELVNNG 429
              K+G       +   M   G      T+  LI   ++         V +IM E    G
Sbjct: 114 KLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEE--EFG 171

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++    TYN L+  L  DG   K V +++   +M      P++ T+N+LIK  C+  ++ 
Sbjct: 172 LKLDAFTYNFLLNVLV-DGNKLKLVEIVNS--RMVSRGIKPDVTTFNILIKALCRAHQIR 228

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            A  ++ E+   GL P++ T+  + +  +E+G
Sbjct: 229 PAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 262/565 (46%), Gaps = 62/565 (10%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDP--------------NTVILQLFNSDADPVLI 46
           P       I DIT +I      KL+ ++P              + +I  L N   D  L+
Sbjct: 66  PTIRDTELIHDITAVI------KLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLV 119

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF---TSVSTIFH 103
           L +F W+   +R   SL     ++H  VV+         +H +  N K      ++   H
Sbjct: 120 LAFFDWA--RVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTH 177

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
            L         N I  D+     V+        +   +   YGL  +V SCN  L  +  
Sbjct: 178 RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN 237

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
               E +E   K      I  N  S+N ++  LC+ GK+ +A  ++  M     +P VV+
Sbjct: 238 NS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295

Query: 224 YNILIDGYCKKG--------------------------------GIGKMYKADAVFKDMV 251
           Y+ +IDGYC  G                                 IGK ++A+ V ++M+
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              I+P+ V + TLI GF K  ++  A K F+EM S  I+   +TY +LI G    GK+ 
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           E   L  EM++ GLKP+ VT   LI+ +CK   +  A  L +++ + G++P+++TY  LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D  CK G ++ A  + + M  +G+  +V  YN ++ G+ + GN+E    +M E+   G+ 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              +TY  ++ A C+ G   KA  LL EM     +   P +VT+NVL+ GFC  G LED 
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ---PTVVTFNVLMNGFCMLGMLEDG 592

Query: 492 NGLLNELLEKGLIPNQTTYQIVREE 516
           + LL  +LEKG++P+  TY  + ++
Sbjct: 593 DRLLGWMLEKGIVPDAITYNTLMKQ 617



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 194/366 (53%), Gaps = 8/366 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K G        + EM  ++I  +  ++  ++ G  + GK+ +  ++  +M S G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P  VTY  LID YCK G   +M  A ++  +MV+ G+ PN VT+  LIDG CK   + 
Sbjct: 429 LKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++ +EM   G+   V  YNS++NG+C  G +++A+ L  EM  +G+ P+ +T   +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + +C+   ++KA  L  ++ ++GL P+V+T+N L++ +C  G +ED   +   ML++G++
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TYN L+       ++     I   + N G+     TYNIL+   CK    K+A  L
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 457 LDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             EM     EK + P + +YN LIK F +K K  +A  L  E+   GL+ +   Y    +
Sbjct: 666 YKEMI----EKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 516 EMMEKG 521
              E+G
Sbjct: 722 MCYEEG 727



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 172/314 (54%), Gaps = 3/314 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++   L+    K G+  +   ++ EM +  +  N+ ++  +++GLCK G+L+ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           ++++++M+  G+   V  YN +++G CK G I +  K   + K+M   GI P+ +T+ T+
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK---LMKEMEVAGIDPDAITYTTV 544

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +C+  +I  A K+ +EM   G+   VVT+N L+NG C+ G L++   L   M+  G+
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T N L+   C +  +     ++  +  QG++P   TYN LI  +CK   +++A+ 
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+++G +P V++YN LI    ++      R +  E+  +G+ A    YN  V    
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 446 KDGKSKKAVSLLDE 459
           ++G  +  ++L DE
Sbjct: 725 EEGDVEITLNLCDE 738



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 5/352 (1%)

Query: 75  VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           ++  Y    + +  F + GK      +FH +   S  L  + +    L+  Y K  +   
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEM--ISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F         G+  ++++   L+  L K G+ +    +  EM+++ ++LN+  +N ++N
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G+CKAG + +A  +M++M+  G+ P  +TY  +ID YC+ G I K +K   + ++M++ G
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK---LLQEMLDRG 568

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P  VTFN L++GFC    +    ++   M   GI    +TYN+L+   C+   ++   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M   G+ P+  T N LI G CK + +++A  L+ ++ E+G  P+V +YN LI  +
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            K+ +  +A  +   M   G++ D   YN  +     EG+VE   N+ +E +
Sbjct: 689 YKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 223/421 (52%), Gaps = 8/421 (1%)

Query: 90  VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS 149
           + +   TS    F   S  SD +  N    ++L+ A              +     G   
Sbjct: 126 LSDASLTSARRFFD--SMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGP 183

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N L+ A  + G+ +  E +   M    ++ NL +FN ++NG+CKAGK+  A  + 
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M   G++P  V+YN L+ GYCK G     ++A +VF +M + GI+P+ VTF +LI   
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGC---SHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  N+  A+ +  +M   G+    VT+ +LI+G C  G LD+A+     M    +KP+V
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  NALING+C    +++AR L  ++  +GL P V+TY+T+I AYCK      AF +   
Sbjct: 361 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 420

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML++GVLPD  TY+ LI  L  E  +     +   ++  G++    TY  L+   CK+G 
Sbjct: 421 MLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 480

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A+SL D   KM K    P++VTY+VLI G  +  +  +A  LL +L  +  IP  T 
Sbjct: 481 VERALSLHD---KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTK 537

Query: 510 Y 510
           Y
Sbjct: 538 Y 538



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 219/447 (48%), Gaps = 65/447 (14%)

Query: 138 AFKRAG-------------DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AF RAG             D GLK ++++ N ++  + K GK ED   V+ EM R  +  
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  S+N ++ G CKAG  ++A  +  +M   G+ P VVT+  LI   CK G    +  A 
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG---NLEWAV 310

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M E G+  NEVTF  LIDGFCK   +  A+     M    I   VV YN+LING 
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+ G++DEA  L  EM A GLKP+VVT + +I+ +CK      A  L   + E+G+ P  
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 430

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITY++LI   C+E R+ DA  +  +M+  G+ PD  TY  LI G  +EGNVE   ++ ++
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL--------------------------- 457
           +V  G+   +VTY++L+  L K  ++ +A  LL                           
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550

Query: 458 -------------------DEMFKMEKEKKWPNI--VTYNVLIKGFCQKGKLEDANGLLN 496
                              D++++   ++ W N+    Y+VLI G C+ G +  A     
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNW-NLDGSVYSVLIHGHCRAGNVMKALSFHK 609

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++L++G  PN T+   +   + E G +
Sbjct: 610 QMLQRGFAPNSTSTISLIRGLFENGMV 636



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 208/368 (56%), Gaps = 6/368 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V + N L+RAL   G  ++   + ++M+      N+ ++N ++    +AG+++ A
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M   G+ P +VT+N +++G CK G   KM  A  VF +M+  G+ P+ V++NTL
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAG---KMEDARKVFDEMMREGLAPDGVSYNTL 261

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+CK      A+ VF EM   GI   VVT+ SLI+ +C  G L+ AV L  +M   GL
Sbjct: 262 VGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGL 321

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N VT  ALI+GFCKK  ++ A +    + +  + PSV+ YN LI+ YC  GRM++A  
Sbjct: 322 QMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARE 381

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  +G+ PDV TY+ +I+   +  +      +  +++  G+    +TY+ L+  LC
Sbjct: 382 LLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 441

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++ +   A  L   M K+  +   P+  TY  LI G C++G +E A  L +++++ G++P
Sbjct: 442 EEKRLSDAHVLFKNMIKLGLQ---PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498

Query: 506 NQTTYQIV 513
           +  TY ++
Sbjct: 499 DVVTYSVL 506



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 171/326 (52%), Gaps = 23/326 (7%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G  P V+ YN ++           +  A   F  M+ +G+ PN  T+N LI   C   + 
Sbjct: 111 GYVPSVLAYNAVLLALSD----ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHR 166

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ +  +M   G    VVTYN+L+      G++D A  L   M+  GLKPN+VT N++
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +NG CK   +E AR +FD++  +GL+P  ++YNTL+  YCK G   +A ++   M  +G+
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PDV T+  LI  + + GN+E    ++ ++   G++   VT+  L+   CK G    A  
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA-- 344

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-- 513
            L  +  M + +  P++V YN LI G+C  G++++A  LL+E+  KGL P+  TY  +  
Sbjct: 345 -LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 403

Query: 514 --------------REEMMEKGFIPD 525
                          ++M+EKG +PD
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPD 429



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 183/338 (54%), Gaps = 7/338 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N VL  L  A  L  A    + M S GV+P V TYNILI   C   G G   +A ++ 
Sbjct: 118 AYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALC---GRGHRKEALSIL 173

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           +DM   G  PN VT+NTL+  F +   +  A ++   M   G+   +VT+NS++NG+C  
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK+++A  + DEMM  GL P+ V+ N L+ G+CK     +A  +F +++++G+ P V+T+
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 293

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +LI   CK G +E A  +   M +RG+  +  T+  LI G  ++G ++     +  +  
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             ++  +V YN L+   C  G+  +A  LL EM   E +   P++VTY+ +I  +C+   
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEM---EAKGLKPDVVTYSTIISAYCKNCD 410

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              A  L  ++LEKG++P+  TY  +   + E+  + D
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 167/338 (49%), Gaps = 53/338 (15%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           ++  + GL+ + ++   L+    K+G  +D     + M++ RI+ ++  +N ++NG C  
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G++++A +++ +M++ G+ P VVTY+ +I  YCK       ++ +   + M+E G+LP+ 
Sbjct: 374 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN---QQMLEKGVLPDA 430

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+++LI   C+++ +S A  +F+ M   G+     TY SLI+G C +G ++ A++L D+
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490

Query: 320 MMASGLKPNVVTSNALING----------------------------------------- 338
           M+ +G+ P+VVT + LING                                         
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550

Query: 339 ---------FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                    FC K L+ +A  ++  + ++  +     Y+ LI  +C+ G +  A +    
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           ML RG  P+ ++   LI GL   G V     ++ +L+N
Sbjct: 611 MLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 47/286 (16%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY KN   H  FE  ++  + G+    ++ + L+R L +E +  D   ++K M +  ++ 
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY------------- 231
           +  ++  +++G CK G + +A  + + M   GV P VVTY++LI+G              
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523

Query: 232 ---------------------CKKGGI-------------GKMYKADAVFKDMVENGILP 257
                                C+K  +             G M +AD V++ M++     
Sbjct: 524 FKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 583

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +   ++ LI G C+  N+  A+   ++M   G A    +  SLI GL  +G + EA  + 
Sbjct: 584 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVI 643

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            +++      +   S ALI+    +  V+    +   +++ GL PS
Sbjct: 644 QQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    ++ YN ++ AL  D     A    D M     +   PN+ TYN+LI+  C +G  
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLS---DGVAPNVYTYNILIRALCGRGHR 166

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++A  +L ++   G  PN  TY  +       G +   E
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 248/480 (51%), Gaps = 35/480 (7%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH     +  P    F  +     K    ST+  +LS   DS     I  D+  LA V
Sbjct: 35  RMLHK----QPPPSTVDFNRLLTSIAKTKHHSTLL-SLSRQMDSF---GIPPDVYTLAIV 86

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL      F A  +    G +    +   L+R L  EGK  +  +++ +M     
Sbjct: 87  INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + N+ ++  ++NGLCK  ++ +A +I  +M + G+SP +VTYN LI G CK   + +   
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKH 203

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +  +MV++ I+P+  T NT++D  CK+  ++ A  V + M   G+   VVTYN+L++
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C+  ++D AV + D M+      NV++ N LING+CK + V+KA  LF+++S Q L+P
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + +TYNTLI   C  GR++DA ++ + M+ RG +PD+ TY  L   L +  +++    ++
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +  +     +  Y  ++  +C+ G+ + A  L      +  +   PN+ TYN++I G 
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS---NLSSKGLQPNVWTYNIMIHGL 440

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
           C++G L +A+ L +E+ + G  PN  TY ++                 EEM+ +GF  D+
Sbjct: 441 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 500



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 211/427 (49%), Gaps = 43/427 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F R        S +  N+LL ++ K      +  + ++M    I  ++ +   V+N
Sbjct: 29  ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC   +++ A   +  +  LG  P   T+  LI G C +G IG+   A  +F  M+  G
Sbjct: 89  SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE---ALHLFDKMIGEG 145

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC--------- 305
             PN VT+ TLI+G CKD  ++ A  +F EM + GI+  +VTYNSLI+GLC         
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 306 ------VDGKL--------------------DEAVALRDEMMASGLKPNVVTSNALINGF 339
                 VD K+                     EA  + D M+  G++PNVVT NAL++G 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C +  V+ A  +FD +  +    +VI+YNTLI+ YCK   ++ A  +   M  + + P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TYN LI GL   G ++   ++ +E+V  G    LVTY  L   LCK+    KA++LL  
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-- 383

Query: 460 MFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
             K  +   W P+I  Y  ++ G C+ G+LEDA  L + L  KGL PN  TY I+   + 
Sbjct: 384 --KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 519 EKGFIPD 525
           ++G + +
Sbjct: 442 KQGLLAE 448



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 220/427 (51%), Gaps = 28/427 (6%)

Query: 132 PHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           PH         +F R        S +   +LL ++ K   +  V  +  +M    I  ++
Sbjct: 557 PHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 616

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK---KGGIGKMYKA 243
            + N ++N  C   +L  A  ++  +  LG  P VVTY  L++G CK   KG    ++  
Sbjct: 617 YTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTY 676

Query: 244 DAV----------------FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +++                  +MV + I+PN V F+T++D  CK+  I+ A  V + M  
Sbjct: 677 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 736

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   VVTY +L++G C+  ++DEAV + D M+  G  PNV + N LING+C+ + ++K
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L + +S QGL    +TYNTLI   C  GR++ A A+ + M+  G +PD+ TY  L+ 
Sbjct: 797 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 856

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            L +  ++     ++  +  + + A ++ YNI +  +C+ G+ + A  L      +  + 
Sbjct: 857 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS---NLSSKG 913

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             P++ TYN++I G C++G L++AN L  ++ E  +  N T+ +  +  + +K  +P+I+
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEID 973

Query: 528 GHMYNIS 534
             +Y+IS
Sbjct: 974 L-VYSIS 979



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 189/421 (44%), Gaps = 74/421 (17%)

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L K    +    + K ++    + ++  +  +L+G+C+AG+L  A D+  ++ S G+ P 
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V TYNI+I G CK+G + +   A  +F +M +NG  PN+ T+N +  GF ++      ++
Sbjct: 430 VWTYNIMIHGLCKQGLLAE---ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDG-------------------------------- 308
           + EEM + G +  V T   L+  L  DG                                
Sbjct: 487 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLS 546

Query: 309 --------------KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                          LD+A++  + M+     P+ V    L+    K K       L   
Sbjct: 547 SSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQ 606

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN----------------------SMLD 392
           +   G+ P V T N LI+++C   R+  AF++                         M+ 
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMIT 666

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G+ PD+ TYN LI  L      + V  ++NE+VN+ +   +V ++ +V ALCK+G    
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  ++D M K   E   P++VTY  L+ G C + ++++A  + + ++ KG +PN  +Y I
Sbjct: 727 AHDVVDMMIKRGVE---PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783

Query: 513 V 513
           +
Sbjct: 784 L 784



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 226/531 (42%), Gaps = 93/531 (17%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID-MLMLAYV 127
           L+H L    +     S  H  V  G+   + T      T SD LC+N  +   M +L  +
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVT----YRTLSDYLCKNRHLDKAMALLKAI 386

Query: 128 K--NMKPHLG-----FEAFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKF 167
           +  N  P +       +   RAG+              GL+ +V + N ++  L K+G  
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            +   ++ EM +     N  ++N +  G  +  +  +  +++E+M + G S  V T  +L
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 506

Query: 228 I-----DGY--------CKKGGIGK------------------------------MYKAD 244
           +     DG         CK     +                              +  A 
Sbjct: 507 VGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDAL 566

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           + F  M+     P+ V F  L+    K ++ S  + +  +M S GI   V T N LIN  
Sbjct: 567 SSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSF 626

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK--------------------KL 344
           C   +L  A ++  +++  G +P+VVT   L+NG CK                      L
Sbjct: 627 CHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNL 686

Query: 345 VEKARV--LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            E   V  L +++    + P+V+ ++T++DA CKEG +  A  + + M+ RGV PDV TY
Sbjct: 687 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 746

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ G      ++    + + +V+ G    + +YNIL+   C+  +  KA+ LL++   
Sbjct: 747 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ--- 803

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M  +    + VTYN LI G C  G+L+ A  L +E++  G IP+  TY+I+
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 854



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 148/269 (55%), Gaps = 3/269 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A + F  M+     P+ V FN L+    K ++ S  + +  +M S GI   V T   +I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC   ++D A +   +++  G +P+  T   LI G C +  + +A  LFD +  +G  
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY TLI+  CK+ ++ +AF + + M+ +G+ P++ TYN LI GL +    + V  +
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           MNE+V++ +   + T N +V ALCK+G   +A  ++D M     E   PN+VTYN L+ G
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE---PNVVTYNALMDG 264

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C + +++ A  + + ++ K  + N  +Y
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISY 293



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 13/249 (5%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FNTL      DE    A+  F  M         V +N L+  +         ++L  +M 
Sbjct: 23  FNTL------DE----ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 72

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G+ P+V T   +IN  C    V+ A      I + G  P   T+ TLI   C EG++ 
Sbjct: 73  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 132

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + M+  G  P+V TY  LI GL ++  V    NI +E++  G+   +VTYN L+
Sbjct: 133 EALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 192

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK  + K   +L++EM      K  P++ T N ++   C++G + +A+ +++ ++ +
Sbjct: 193 HGLCKLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 249

Query: 502 GLIPNQTTY 510
           G+ PN  TY
Sbjct: 250 GVEPNVVTY 258


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 218/391 (55%), Gaps = 8/391 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   +V S N +L    K  + E+  ++ ++M  R    ++ S+  V+NGLCK  +++
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +M+ M   G  P V+TY  L+DG+C+   +G +  A  + + M E G  PN +T+N
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCR---VGDLDGAVELVRKMTERGYRPNAITYN 188

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            ++ G C    + +A+++F+EM   G     V TY+++++ L   GK+D+A  L + M++
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  PNVVT ++L++G CK   +++A  L   ++  G SP+++TYNT+ID +CK GR+++
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 308

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A+ +   M+D G  P+V TY  L+    + G  E    ++  +V  G    L TYN L+ 
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 368

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             CK  + ++A  LL  M    ++   PN+V+YN +I G C+  K+ +   LL ++L   
Sbjct: 369 MFCKKDEVERACQLLSSMI---QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            +P+  T+  + + M  K +  DI   ++N+
Sbjct: 426 CVPDIVTFNTIIDAMC-KTYRVDIAYELFNL 455



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 240/462 (51%), Gaps = 30/462 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALS---TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           + +H      K  S   +F  +    +C   +   S I+D L    VK+ K        +
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL----VKSGKVDDACRLVE 244

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                G   +V++ + LL  L K GK ++   + + M R     N+ ++N +++G CK G
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           ++++A  ++E+M   G  P VVTY +L+D +CK    GK   A  + + MVE G +PN  
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK---CGKAEDAIGLVEVMVEKGYVPNLF 361

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+N+L+D FCK + +  A ++   M   G    VV+YN++I GLC   K+ E V L ++M
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +++   P++VT N +I+  CK   V+ A  LF+ I E G +P+++TYN+L+   CK  R 
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 481

Query: 381 EDA-FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           + A + +R     +G  PD+ TYN +I GL +   V+    +  +++++G+    VTY+I
Sbjct: 482 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 541

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++ +LCK     +A ++L+ M K   +   P  +TY  LI GFC+ G L+ A  +L  LL
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFD---PGAITYGTLIDGFCKTGNLDKALEILQLLL 598

Query: 500 EKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            KG  P+  T+ I                + E M+  G +PD
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 219/390 (56%), Gaps = 25/390 (6%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  L K  + +D   + +EM       N+ S+N VL+G CKA ++  A  ++E M  
Sbjct: 48  NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVM 107

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P VV+Y  +I+G CK   + ++ +A  V   M++ G  PN +T+ TL+DGFC+  +
Sbjct: 108 RGCPPDVVSYTTVINGLCK---LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 164

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKPNVVTSN 333
           +  A+++  +M   G     +TYN++++GLC   KLD A+ L  EM  SG   P+V T +
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +++   K   V+ A  L + +  +G SP+V+TY++L+   CK G++++A A+   M   
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P++ TYN +I G  + G ++   +++ E+V+ G +  +VTY +L+ A CK GK++ A
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344

Query: 454 VSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           + L++ M     EK + PN+ TYN L+  FC+K ++E A  LL+ +++KG +PN  +Y  
Sbjct: 345 IGLVEVMV----EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 513 V----------------REEMMEKGFIPDI 526
           V                 E+M+    +PDI
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 215/388 (55%), Gaps = 6/388 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFVLNG 195
           E  ++  + G + + ++ N ++  L    K +    ++KEM+       ++ +++ +++ 
Sbjct: 170 ELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS 229

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K+GK++ A  ++E M S G SP VVTY+ L+ G CK G   K+ +A A+ + M  +G 
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG---KLDEATALLQRMTRSGC 286

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VT+NT+IDG CK   I  A  + EEM   G    VVTY  L++  C  GK ++A+ 
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + M+  G  PN+ T N+L++ FCKK  VE+A  L   + ++G  P+V++YNT+I   C
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K  ++ +   +   ML    +PD+ T+N +I  + +   V+    + N +  +G    LV
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN LV  LCK  +  +A  LL EM +  K+   P+I+TYN +I G C+  +++ A  L 
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTR--KQGCSPDIITYNTVIDGLCKSKRVDRAYKLF 524

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
            ++L  GL P+  TY IV   + +  F+
Sbjct: 525 LQMLSDGLAPDDVTYSIVISSLCKWRFM 552



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 236/465 (50%), Gaps = 16/465 (3%)

Query: 68  RLLHSLVVAKKYPKI---RSFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDML 122
           RL+ ++V     P +    S LH   K GK    + +   +  S CS ++   + IID  
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID-- 298

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
              + K  +    +   +   D G + +V++   LL A  K GK ED   + + M  +  
Sbjct: 299 --GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             NL ++N +L+  CK  ++ +A  ++  M   G  P VV+YN +I G CK     K+++
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT---KVHE 413

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              + + M+ N  +P+ VTFNT+ID  CK   +  A ++F  +   G    +VTYNSL++
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473

Query: 303 GLCVDGKLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           GLC   + D+A  L  EM    G  P+++T N +I+G CK K V++A  LF  +   GL+
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P  +TY+ +I + CK   M++A  +   ML  G  P   TY  LI G  + GN++    I
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  L++ G    +VT++I +  L K G+ ++A  LL+ M +       P+ VTYN L+KG
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR---AGLVPDTVTYNTLLKG 650

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           FC   + EDA  L   + + G  P+  TY  +   +++K    D+
Sbjct: 651 FCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 695



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 202/367 (55%), Gaps = 24/367 (6%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R+ ++ +      +L GLC AG+ + A     +M S    P  VTYN +I+G  K   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSD- 58

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             ++  A  + ++MV+NG  PN  ++NT++ GFCK   +  A+ + E+M   G    VV+
Sbjct: 59  --RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVS 116

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y ++INGLC   ++DEA  + D+M+  G +PNV+T   L++GFC+   ++ A  L   ++
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNV 415
           E+G  P+ ITYN ++   C   +++ A  +   M + G   PDV TY+ ++  L + G V
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    ++  +V+ G    +VTY+ L+  LCK GK  +A +LL    +M +    PNIVTY
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ---RMTRSGCSPNIVTY 293

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMME 519
           N +I G C+ G++++A  LL E+++ G  PN  TY ++                 E M+E
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353

Query: 520 KGFIPDI 526
           KG++P++
Sbjct: 354 KGYVPNL 360



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 208/463 (44%), Gaps = 55/463 (11%)

Query: 59  ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG----------------KFTSVSTIF 102
            S +++    LLH L  A K  +  + L    ++G                K   +   +
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 103 HALSTCSDSLCRNSIIIDMLML-AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
           H L    D  C+ +++   ++L A+ K  K        +   + G   ++ + N LL   
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K+ + E    +   M ++    N+ S+N V+ GLCKA K+++   ++E M S    P +
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430

Query: 222 VTYNILIDGYCKKGGIGKMY--------------------------------KADAVFKD 249
           VT+N +ID  CK   +   Y                                +A+ + ++
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490

Query: 250 MV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           M  + G  P+ +T+NT+IDG CK + +  A K+F +M S G+A   VTY+ +I+ LC   
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +DEA  + + M+ +G  P  +T   LI+GFCK   ++KA  +   +  +G  P V+T++
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
             ID   K GR+  A  +  +ML  G++PD  TYN L+ G       E   ++   +   
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQC 670

Query: 429 GMRAGLVTYNILVGALC-----KDGKSKKAVSLLDEMFKMEKE 466
           G      TY  LVG L      KD  ++ + S++D  FK+  E
Sbjct: 671 GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE 713



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 13/257 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           S +H   K+ +F     +   ++    CS  +   + +ID L     K+ +    ++ F 
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL----CKSKRVDRAYKLFL 525

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +    GL    ++ + ++ +L K    ++   V + M +   +    ++  +++G CK G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            L+KA +I++ + S G  P VVT++I ID   K+   G++ +A  + + M+  G++P+ V
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR---GRLRQAGELLETMLRAGLVPDTV 642

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL--DEAVALRD 318
           T+NTL+ GFC       A+ +FE M   G      TY +L+  L VD K   D    +  
Sbjct: 643 TYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL-VDKKSYKDLLAEVSK 701

Query: 319 EMMASGLKPNVVTSNAL 335
            M+ +G K N   S+ L
Sbjct: 702 SMVDTGFKLNHELSSKL 718


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 226/436 (51%), Gaps = 49/436 (11%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  +    K       F +    GL   V++   LL  L  E +  +   ++ +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-- 237
                N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CKKG    
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+   A  +F +M E GI P+  T+N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T +++I+GFCK+  ++ A  +F  ++ +G SP++IT+NTLID YC   R++D   +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M + G++ D +TYN LI G    G++    +++ E++++G+   +VT + L+  LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 447 DGKSKKAVSLLDEMFK-MEKEKK-----------WPNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK M+K KK            P++ TYN+LI G   +GK  +A  L
Sbjct: 478 NGKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 495 LNELLEKGLIPNQTTY 510
             E+  +G++P+  TY
Sbjct: 534 YEEMPHRGIVPDTITY 549



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 217/398 (54%), Gaps = 33/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L K+G+  D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             +SP VVTYN LI+ + K+G   K ++A+ ++ +M+  GI+PN +T++++IDGFCK   
Sbjct: 319 RKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  +F  M + G +  ++T+N+LI+G C   ++D+ + L  EM  +GL  +  T N 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM---- 390
           LI+GF     +  A  L  ++   GL P ++T +TL+D  C  G+++DA  M   M    
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 391 --LD-----RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             LD      GV PDV TYN LI+GL  EG       +  E+ + G+    +TY+ ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  +  +A  + D    M  +   PN+VT+  LI G+C+ G+++D   L  E+  +G+
Sbjct: 556 LCKQSRLDEATQMFD---SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
           + N  TY                  + +EM+  G  PD
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 206/395 (52%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SFN ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+  L+ G C +    ++ +A  +F  M E    PN VTF TL++G 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVE---DRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TY+ ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    + MF +   K   PN++T+N LI G+C   +++D   LL+E+ E GL+ + 
Sbjct: 375 RLDAA----EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
           TTY                  + +EM+  G  PDI
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ ++M   G+ P  +TY+ +IDG+CK+    ++  A+ +F  M   G  PN
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ---NRLDAAEHMFYLMATKGCSPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TFNTLIDG+C  + I   M++  EM   G+ A   TYN+LI+G  + G L+ A+ L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           EM++SGL P++VT + L++G C    ++ A  +F  + +            G+ P V TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    + + + +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+  L+   CK G+    + L  E   M +     N +TY  LI GF + G 
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCE---MGRRGIVANAITYITLICGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           +  A  +  E++  G+ P+  T +
Sbjct: 632 INGALDIFQEMISSGVYPDTITIR 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 192/357 (53%), Gaps = 43/357 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  N  +++ +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------- 237
            +   M + G SP ++T+N LIDGYC    I                             
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 238 ---GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------G 286
              G +  A  + ++M+ +G+ P+ VT +TL+DG C +  +  A+++F+ M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 287 SH---GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           SH   G+   V TYN LI+GL  +GK  EA  L +EM   G+ P+ +T +++I+G CK+ 
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  +FD +  +  SP+V+T+ TLI+ YCK GR++D   +   M  RG++ +  TY 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            LI G  + GN+ G  +I  E++++G+    +T   ++  L    + K+AV++L+++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 14/339 (4%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDMVENGILPN 258
           L  A D+  DM      P VV +  L+      G + +M + D V   ++ M    I  +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             +FN LI  FC    +  A+  F ++   G+   VVT+ +L++GLCV+ ++ EA+ L  
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T++D  CK+G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 379 RMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
               A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G+   L TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  +A  L +E
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           +L +G+IPN  TY  + +   ++  + D   HM+ +  T
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 388



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 18/278 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ + N LI  FC    +  A   F  I++ GL P V+T+ TL+   C E R+ +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M   E     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+ 
Sbjct: 230 CKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           P+  TY                + + +EM+E+   PD+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 16/251 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H F   G   +   +   +   S  LC + +  D L+     N K     E FK   
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 144 DY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                        G++  V + N L+  L+ EGKF + E +Y+EM  R I  +  +++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCK  +L++A+ + + M S   SP VVT+  LI+GYCK G +    +   +F +M  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR 609

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI+ N +T+ TLI GF K  NI+ A+ +F+EM S G+    +T  +++ GL    +L  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 313 AVALRDEMMAS 323
           AVA+ +++  S
Sbjct: 670 AVAMLEKLQMS 680


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 236/431 (54%), Gaps = 27/431 (6%)

Query: 123  MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            +L  V+N    LGF  +  + + G      +CN LL+AL++  + +D   VY+   +   
Sbjct: 817  VLQGVRNGDAALGFFDWATSQE-GYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCC 873

Query: 183  ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
              N+ +F  +++GLC+AG +  A +++++M   GV   V+ +N++I G C      K+  
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSAR---KLDS 930

Query: 243  ADAVFKDMVENGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +FK+M E+G  P +V T++T++D   K   +  A ++ E+M S G +  VVTY+SL+
Sbjct: 931  ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990

Query: 302  NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            +GLC  GKLDEA AL   M  SG  PN+VT N +I+G CK   +++A  L +++ + G  
Sbjct: 991  HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050

Query: 362  PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
            P+V+TY  L+DA+CK G+ EDA  +   M+++G +P++ TYN L+    ++  VE    +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 422  MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            ++ ++  G    +V+YN ++  LCK  K  + V LL++M         P+IVT+N +I  
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML---SNNCVPDIVTFNTIIDA 1167

Query: 482  FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----------------IVREEMMEKGFIP 524
             C+  +++ A  L N + E G  PN  TY                  ++RE   ++G  P
Sbjct: 1168 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227

Query: 525  DIEGHMYNISG 535
            DI  +   I G
Sbjct: 1228 DIITYNTVIDG 1238



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/569 (28%), Positives = 278/569 (48%), Gaps = 74/569 (13%)

Query: 23   KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK- 81
            KL  T    V+  + N DA     L +F W+T +   +H       LL +L+  K+ PK 
Sbjct: 808  KLTTTVVGKVLQGVRNGDA----ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKR-PKD 862

Query: 82   -IRSFLHMFVKNGKFTSVSTIFHALSTCSD--------------SLCRNSIIIDMLMLAY 126
             ++ + +    +    + + + H L    D               + +N I+ ++++   
Sbjct: 863  ALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGL 922

Query: 127  VKNMKPHLGFEAFKRAGDYG-LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
                K     E FK   + G     V + + ++ +LVK GK +D   + ++M  +    N
Sbjct: 923  CSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPN 982

Query: 186  LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
            + +++ +L+GLCKAGKL++A+ +++ M   G SP +VTYN +IDG+CK G I        
Sbjct: 983  VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042

Query: 238  ------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                    GK   A  + + MVE G +PN  T+N+L+D FCK +
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102

Query: 274  NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
             +  A ++   M   G    VV+YN++I GLC   K+ E V L ++M+++   P++VT N
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162

Query: 334  ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA-FAMRNSMLD 392
             +I+  CK   V+ A  LF+ I E G +P+++TYN+L+   CK  R + A + +R     
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222

Query: 393  RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            +G  PD+ TYN +I GL +   V+    +  +++++G+    VTY+I++ +LCK     +
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282

Query: 453  AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
            A ++L+ M K   +   P  +TY  LI GFC+ G L+ A  +L  LL KG  P+  T+ I
Sbjct: 1283 ANNVLELMLKNGFD---PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 513  ----------------VREEMMEKGFIPD 525
                            + E M+  G +PD
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPD 1368



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 255/587 (43%), Gaps = 121/587 (20%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIR------------------ 83
           DP   L +F W+       H +     LL+ LV A +Y +                    
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTY 164

Query: 84  -SFLHMFVKNGKFTSVSTIF----------HA------------LSTCSDSLCR------ 114
            + +  F++ GK      +F          HA               CSD++        
Sbjct: 165 STLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK 224

Query: 115 ----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
               +S+  + ++    K+ +        +   D G   +V S N +L    K  + E+ 
Sbjct: 225 TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA 284

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
            ++ ++M  R    ++ S+  V+NGLCK  ++++A  +M+ M   G  P V+TY  L+DG
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344

Query: 231 YCKKGGI--------------------------------GKMYKADAVFKDMVENGILPN 258
           +C+ G +                                  M +A  V + M++ G  P+
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGI---------------------------- 290
            + ++T+I GFCK   +  A  + E+M   G                             
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464

Query: 291 -------AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
                  A  VV Y+ LI+ LC   +L EA +  D M+ +   P+VVT N++++G CK +
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +  A +LFD +   G+ P V+TY+ +I ++CK+  ++ AF M   M +   +PDV TY+
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYS 584

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI GL + G V+   ++  E++  G    LVTYN L+  LCK  K ++A  +L+    M
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE---IM 641

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            K+   P+ +TY  LI G C   +LE+A  +L E+ +KG +P++ TY
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 217/444 (48%), Gaps = 60/444 (13%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           G +G     ++ + L+   ++ GK      ++ EM R+ ++ +      +L GLC AG+ 
Sbjct: 155 GQWG--GDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQC 212

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A     +M S    P  VTYN +I+G  K     ++  A  + ++MV+NG  PN  ++
Sbjct: 213 SDAVLHFREM-SKTCPPDSVTYNTMINGLSKSD---RLDDAIRLLEEMVDNGFAPNVFSY 268

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NT++ GFCK   +  A+ + E+M + G    VV+Y ++INGLC   ++DEA  + D+M+ 
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G +PNV+T   L++GFC+   ++ A  L   ++E+G  P+ ITYN ++  +C+   ME 
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR----------- 431
           A  +   M+  G  PD   Y+ +I+G  + G +    +++ +++  G R           
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448

Query: 432 ------------------------AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
                                     +V Y+IL+ ALCK  +  +A S LD M    K +
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV---KNR 505

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------- 513
            +P++VTYN ++ G C+  ++ DA  L + +   G++P+  TY IV              
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565

Query: 514 --REEMMEKGFIPDIEGHMYNISG 535
              E M E   +PD+  +   I+G
Sbjct: 566 KMLERMKEAKCVPDVVTYSALING 589



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 200/387 (51%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +  CN LL  LVK  ++     +++     +   +  +++ +++G  +AGK+  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVTFN 263
            ++ ++M   G+      +  ++ G C  G       +DAV  F++M +    P+ VT+N
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQC-----SDAVLHFREMSKT-CPPDSVTYN 234

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I+G  K + +  A+++ EEM  +G A  V +YN++++G C   +++ A+ L ++M+  
Sbjct: 235 TMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+VV+   +ING CK   V++A  + D + ++G  P+VITY TL+D +C+ G ++ A
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 354

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M +RG  P+  TYN ++    R  ++E    ++  ++  G     + Y+ ++  
Sbjct: 355 VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK GK ++A  LL++M +       P++   + LI   C+   ++ A  LL   +    
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCR---PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDC 471

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHM 530
            P+   Y I+   + +   +P+ E  +
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWL 498



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 4/355 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+I  + +M  + +        +  +     G     ++ + ++    K GK  +   + 
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M RR    ++   + +++ LCKA  ++ A +++     +  +P VV Y+ILI   CK 
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++ +A++    MV+N   P+ VT+N+++DG CK   I+ A  +F+ M + G+   V
Sbjct: 489 K---RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY+ +I+  C D  LD A  + + M  +   P+VVT +ALING CK   V+KA  +F +
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G +P+++TYNTLID  CK  ++E A  M   M  +   PD  TY CLI GL     
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           +E    ++ E+ + G     +TY  L+ AL K    +    LL EM   E E +W
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE-EGQW 719



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 208/462 (45%), Gaps = 55/462 (11%)

Query: 60   SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG----------------KFTSVSTIFH 103
            S +++    LLH L  A K  +  + L    ++G                K   +   +H
Sbjct: 980  SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 1039

Query: 104  ALSTCSDSLCRNSIIIDMLML-AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             L    D  C+ +++   ++L A+ K  K        +   + G   ++ + N LL    
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099

Query: 163  KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
            K+ + E    +   M ++    N+ S+N V+ GLCKA K+++   ++E M S    P +V
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159

Query: 223  TYNILIDGYCKKGGIGKMY--------------------------------KADAVFKDM 250
            T+N +ID  CK   +   Y                                +A+ + ++M
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219

Query: 251  V-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
              + G  P+ +T+NT+IDG CK + +  A K+F +M S G+A   VTY+ +I+ LC    
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 310  LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +DEA  + + M+ +G  P  +T   LI+GFCK   ++KA  +   +  +G  P V+T++ 
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 370  LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
             ID   K GR+  A  +  +ML  G++PD  TYN L+ G       E   ++   +   G
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 430  MRAGLVTYNILVGALC-----KDGKSKKAVSLLDEMFKMEKE 466
                  TY  LVG L      KD  ++ + S++D  FK+  E
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE 1441



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 202/452 (44%), Gaps = 52/452 (11%)

Query: 84   SFLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
            S +H   K+ +F     +   ++    CS  +   + +ID L     K+ +    ++ F 
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL----CKSKRVDRAYKLFL 1253

Query: 141  RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
            +    GL    ++ + ++ +L K    ++   V + M +   +    ++  +++G CK G
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313

Query: 201  KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
             L+KA +I++ + S G  P VVT++I ID   K+   G++ +A  + + M+  G++P+ V
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR---GRLRQAGELLETMLRAGLVPDTV 1370

Query: 261  TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL--DEAVALRD 318
            T+NTL+ GFC       A+ +FE M   G      TY +L+  L VD K   D    +  
Sbjct: 1371 TYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL-VDKKSYKDLLAEVSK 1429

Query: 319  EMMASGLKPNVVTSN----------------ALINGFCKKKLVEKARVLFDDISEQGLSP 362
             M+ +G K N   S+                A+++ F K    + AR +F+ + ++    
Sbjct: 1430 SMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR---- 1485

Query: 363  SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            +V+ ++ ++  Y    + E AF +   M   GV PD  T+  L+      G ++     +
Sbjct: 1486 NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAA---V 1542

Query: 423  NELV----NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +E V    + G+  G+  ++ ++  L + G   +A  L   M  M  +   P+  T+N L
Sbjct: 1543 DEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL---MLGMPCK---PSAATWNCL 1596

Query: 479  IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +  +   G  E A      L    L P Q +Y
Sbjct: 1597 LSAYKICGDFERA------LRVAELNPTQASY 1622



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKG 486
           +G +  +   N L+  L K  +  +A     ++F+   E +W  + VTY+ LI GF + G
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQA----HDLFRSRIEGQWGGDTVTYSTLISGFIRAG 175

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           K+  A  L +E+  KGL  +   ++ +   + + G   D   H   +S T
Sbjct: 176 KILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 209/379 (55%), Gaps = 8/379 (2%)

Query: 137 EAFKRAGDYG--LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           E     G +G  +K +++    ++ +L K+G  +  + ++ EMK R I  ++ +++ +++
Sbjct: 222 EMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIH 281

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G+C  G+   A  +  +M   GV P VVT+N+LID  CK G   KM +A+ + K M++ G
Sbjct: 282 GMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG---KMEEANHLLKLMIQRG 338

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+  T+NTLIDGFC +  I  A  +F  M S GI    V+YN LING C  G++ EA 
Sbjct: 339 ESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAK 398

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EMM   + P V+T N L+ G  ++  V  A  LF ++    L+P   TYN L+D  
Sbjct: 399 KLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   + +A  + + + +    P +  +NCLI GL +   +E  R + N L + G+   +
Sbjct: 459 CKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNV 518

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TY +++  LCK G+ + A  L      ME++   PN+VT+N L++GFCQ  +++    L
Sbjct: 519 ITYTVMIHGLCKSGQLENAKDLF---LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575

Query: 495 LNELLEKGLIPNQTTYQIV 513
           L E+ EK   P+ +T  IV
Sbjct: 576 LQEMAEKDFSPDASTISIV 594



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 204/385 (52%), Gaps = 12/385 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F    D      + S N LL A+ K  ++ DV  +YK M    +  +  + N ++N
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   K++    ++ +M   G SP  VT+  L+ G C      ++ +A  + + MV  G
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLG---SRISEATGLLRKMVRMG 192

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM----GSHG--IAAGVVTYNSLINGLCVDG 308
             PN VT+ TL++G C   N   A+K+ EEM    G  G  I   +V Y ++I+ LC DG
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +D+   L  EM   G+ P+VV  +++I+G C     E A+ LF+++ ++G+ P+V+T+N
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LIDA CK G+ME+A  +   M+ RG  PD  TYN LI G   EG ++  R++   + + 
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    V+YN+L+   CK G+  +A  L  EM  M KE   P ++TYN L+ G  ++GK+
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREM--MCKE-IMPTVITYNTLLTGLFREGKV 429

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV 513
            DA  L  E+    L P   TY I+
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNIL 454



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 225/462 (48%), Gaps = 17/462 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           + + L+  +  P I SF   L    K  ++  V +++  +S     L  + I +++L+  
Sbjct: 79  VFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIG--LAPDFITLNILINC 136

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y    K   G          G   + ++   L++ L    +  +   + ++M R     N
Sbjct: 137 YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPN 196

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDM----KSLGVS--PKVVTYNILIDGYCKKGGIGK 239
           + ++  +LNGLC  G    A  + E+M       GV+  P +V Y  +ID  CK G I K
Sbjct: 197 VVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDK 256

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
                 +F +M   GI P+ V ++++I G C       A  +F EM   G+   VVT+N 
Sbjct: 257 ---GKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+ LC  GK++EA  L   M+  G  P+  T N LI+GFC +  ++ AR LF  +  +G
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           +    ++YN LI+ YCK GRM +A  +   M+ + ++P V TYN L+ GL REG V    
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           N+  E+  + +     TYNIL+  LCK+    +A+ L      +E     P+I  +N LI
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH---YLENHDFQPSIQIFNCLI 490

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G C+  K+E A  L N L  +GL PN  TY ++   + + G
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 181/319 (56%), Gaps = 3/319 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D G+  +V++ N L+ AL K GK E+  ++ K M +R    +  ++N +++G C 
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+++ A D+   M+S G+    V+YN+LI+GYCK G   +M +A  ++++M+   I+P 
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG---RMVEAKKLYREMMCKEIMPT 412

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+NTL+ G  ++  +  A  +F EM  H +     TYN L++GLC +  L EA+ L  
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH 472

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +     +P++   N LI+G CK + +E AR LF+ +S +GL P+VITY  +I   CK G
Sbjct: 473 YLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++E+A  +   M ++G  P++ T+N L+ G  +   ++ V  ++ E+          T +
Sbjct: 533 QLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS 592

Query: 439 ILVGALCKDGKSKKAVSLL 457
           I+V  L KD K ++ + LL
Sbjct: 593 IVVDLLSKDEKYREYLHLL 611



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 207/417 (49%), Gaps = 23/417 (5%)

Query: 88  MFVKNGKF-TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           M   NG F  ++        T  DSLC++ +I                G E F      G
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDK--------------GKELFLEMKGRG 268

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ + ++  +   G++E  + ++ EM    +  N+ +FN +++ LCKAGK+ +A+
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M   G SP   TYN LIDG+C +G I     A  +F  M   GI  + V++N LI
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRID---DARDLFVSMESKGIETDAVSYNVLI 385

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+CK   +  A K++ EM    I   V+TYN+L+ GL  +GK+ +A  L  EM    L 
Sbjct: 386 NGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLT 445

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P   T N L++G CK   + +A  LF  +      PS+  +N LID  CK  ++E A  +
Sbjct: 446 PESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAREL 505

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N +   G+ P+V TY  +I GL + G +E  +++   +   G    LVT+N L+   C+
Sbjct: 506 FNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQ 565

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           + + +K V LL EM     EK + P+  T ++++    +  K  +   LL     +G
Sbjct: 566 NDEMQKVVELLQEM----AEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 45/323 (13%)

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G I K  +A +VF  +++    P   +FNTL+    K +     + +++ M   G+A
Sbjct: 66  CKSGHI-KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLA 124

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +T N LIN  C   K+D  +A+  EM+  G  PN VT  +L+ G C    + +A  L
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184

Query: 352 FDDISEQGLSPSVITYNTL----------------------------------------- 370
              +   G  P+V+TY TL                                         
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID+ CK+G ++    +   M  RG+ PDV  Y+ +I G+   G  EG + + NE+V+ G+
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VT+N+L+ ALCK GK ++A  LL  M    +  + P+  TYN LI GFC +G+++D
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMI---QRGESPDTFTYNTLIDGFCLEGRIDD 361

Query: 491 ANGLLNELLEKGLIPNQTTYQIV 513
           A  L   +  KG+  +  +Y ++
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVL 384


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 215/382 (56%), Gaps = 6/382 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +G   FK     G   +V++ N ++    K  + ++     + M  + +E NL +FN ++
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLC+ G+L + S+++ +M   G  P  VTYN L++GYCK+   G  ++A  +  +MV N
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKE---GNFHQALVLHAEMVRN 117

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ PN VT+ +LI+  CK  N++ AM+ F++M   G+     TY ++ING    G LDEA
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             + +EM  SG  P++VT NALING C    +E+A  L  D+  +G+ P V++Y+T+I  
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           + +   ++ AF M+  M+ + VLPD  TY+ LI GL  +  +    ++  E++   +   
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TY  L+ A CK+G   KA+ L DEM    ++   P+ VTYNVLI G  ++ + ++A  
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMI---QKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 494 LLNELLEKGLIPNQTTYQIVRE 515
           LL +L     IP+  TY  + E
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIE 376



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 223/414 (53%), Gaps = 21/414 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + ++  Y K  +    F   +  G  GL+ ++++ N ++  L ++G+ ++   V 
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R+    +  ++N ++NG CK G  ++A  +  +M   G+SP VVTY  LI+  CK 
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + +   A   F  M   G+ PNE T+ T+I+GF +   +  A +V  EM   G    +
Sbjct: 137 GNLNR---AMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LING CV G+++EA+ L  +M+  G+ P+VV+ + +I+GF + + +++A  +  +
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVE 253

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + + P  +TY++LI   C++ R+ +A  M   ML   + PD  TY  LI    +EG+
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    ++ +E++  G     VTYN+L+  L K  +SK+A  LL ++F    +   P+ VT
Sbjct: 314 LNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF---YDDSIPSAVT 370

Query: 475 YNVLI---------------KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           YN LI               KGFC KG +++A+ +   ++ K   PN+  Y ++
Sbjct: 371 YNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 182/332 (54%), Gaps = 22/332 (6%)

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M+  G  P VVTYN +IDGYCK   + +  +A    + M   G+ PN +TFN +I+G 
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCK---LKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+D  +    +V  EM   G     VTYN+L+NG C +G   +A+ L  EM+ +GL PNV
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT  +LIN  CK   + +A   FD +  +GL P+  TY T+I+ + ++G +++A+ + N 
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G +P + TYN LI G    G +E    ++ ++V  G+   +V+Y+ ++    ++ +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  +  EM     +   P+ VTY+ LI+G C++ +L +A  +  E+L   L P++ T
Sbjct: 244 LDRAFQMKVEMIG---KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 510 YQI----------------VREEMMEKGFIPD 525
           Y                  + +EM++KGF+PD
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 139/255 (54%), Gaps = 8/255 (3%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
            ++ F+EM  +G    VVTYN++I+G C   + DEA      M   GL+PN++T N +IN
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G C+   +++   +  ++S +G  P  +TYNTL++ YCKEG    A  +   M+  G+ P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V TY  LI  + + GN+       +++   G+     TY  ++    + G   +A  +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---- 513
           +E   M +    P+IVTYN LI G C  G++E+A GLL +++ KG++P+  +Y  +    
Sbjct: 182 NE---MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 514 -REEMMEKGFIPDIE 527
            R + +++ F   +E
Sbjct: 239 ARNQELDRAFQMKVE 253



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 18/300 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V+S + ++    +  + +    +  EM  + +  +  +++ ++ GLC+  +L +A
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+ ++M ++ + P   TY  LI+ YCK+G + K   A  +  +M++ G LP+ VT+N L
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK---ALHLHDEMIQKGFLPDAVTYNVL 339

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN---------------GLCVDGKL 310
           I+G  K      A ++  ++         VTYN+LI                G C+ G +
Sbjct: 340 INGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLM 399

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           DEA  + + M+    KPN    N +I+G C+   V KA  L+ ++      P  +T   L
Sbjct: 400 DEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLAL 459

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           + A   EG   +   +   +L    L D      L+    +EGN++ V N++ E+  +G+
Sbjct: 460 VKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGL 519



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 24/228 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  KEG      +++ EM ++    +  ++N ++NGL K  +  +A  ++  +    
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363

Query: 217 VSPKVVTYNILID---------------GYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             P  VTYN LI+               G+C KG    M +AD VF+ M+     PNE  
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKG---LMDEADQVFESMINKNHKPNEAI 420

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC---VDGKLDEAVALRD 318
           +N +I G C+  N+  A K+++EM         VT  +L+  L    +DG+L+E +    
Sbjct: 421 YNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIG--- 477

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +++ S    +   S  L+    K+  ++    L  ++++ GL PS  T
Sbjct: 478 DILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 234/446 (52%), Gaps = 24/446 (5%)

Query: 101 IFHALSTCS-DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           +FH L+    DS   + +I + ++ A+V++  P      F +    GL     + N LL 
Sbjct: 79  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLI 138

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L+K   FE    V+ E K   ++L++ SF  ++ G C+ G L+K  +++  M+ +G+SP
Sbjct: 139 LLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSP 197

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            VV Y  LIDG CK G I +      +F  M E  ++ N+ T+  LI+GF K       +
Sbjct: 198 NVVVYTTLIDGCCKNGDIER---GKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGI 254

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           +++E+M   GI   V TYNS+I   C DGKL+ A  L DEM   G+  NVVT N LI G 
Sbjct: 255 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 314

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C+++ V +A  L   +   GLSP++I+YNTLID YC  G ++ A ++ N M   G  P +
Sbjct: 315 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 374

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +TYN LIAG S   N  GV +++ E+   G+    VTY IL+ AL +    +KA  +   
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ------------ 507
              MEK     +I  Y VLI G C  G +++A+ L   L E  L PN             
Sbjct: 435 ---MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 491

Query: 508 --TTYQIVR--EEMMEKGFIPDIEGH 529
             ++Y+ +R  +EM E G +P++  +
Sbjct: 492 EGSSYRALRLLKEMGENGMVPNVASY 517



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 41/382 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GFE   +  + GL  +V+    L+    K G  E  + ++ +M    +  N  ++  ++N
Sbjct: 183 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 242

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  K G      ++ E MK  G+ P V TYN +I   C+    GK+  A  +F +M E G
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI---CRCCNDGKLNNAFELFDEMRERG 299

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           +  N VT+NTLI G C++  +  A ++   M   G++  +++YN+LI+G C  G LD+A 
Sbjct: 300 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 359

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L ++M +SG  P++ T N LI GF + K       +  ++  +GLSPS +TY  L+DA 
Sbjct: 360 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 419

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS------------------------ 410
            +   +E AF + +SM   G++ D+  Y  LI GL                         
Sbjct: 420 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 479

Query: 411 -----------REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
                      +EG+      ++ E+  NGM   + +YN  +  LCKD K  +A  LL +
Sbjct: 480 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKD 539

Query: 460 MFKMEKEKKWPNIVTYNVLIKG 481
           M ++  +   P+I  +N++ K 
Sbjct: 540 MIELGLK---PSISIWNMISKA 558


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 242/485 (49%), Gaps = 87/485 (17%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
             AF+    +G+   V  CN +LR L    +++D+  VY +M +  +E ++ ++N +L+ 
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 196 LCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYCKKGGIGK-------------- 239
            CKAG++++A  +++DM  ++ G  P  VTYN++I+G  +KG + K              
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA 298

Query: 240 -----------------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                            + KA A+  +M   GI+P  VT+NTLIDG  K  N  AA   F
Sbjct: 299 SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKF 358

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK- 341
           +EM + G+   ++TYNSLING C  G L +A+ L  ++  +GL P V+T N LI+G+C+ 
Sbjct: 359 DEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRL 418

Query: 342 ------KKLVEK----------------------------ARVLFDDISEQGLSPSVITY 367
                 ++L E+                             R+ FD++  +GL P    Y
Sbjct: 419 GDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAY 478

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT I A    G + +AF +R  M+ RG+  D  TYN LI GL + G+++    +  ++V 
Sbjct: 479 NTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVT 538

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G+R   VTY  L+ A C+ G+  +A ++ D M         P++VTY + I  +C++G 
Sbjct: 539 DGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLS---PSVVTYTIFIHTYCRRGN 595

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDIEGHMY 531
           L  A G   ++LE+G+ PN+ TY ++                  EM+E+G +P+   +  
Sbjct: 596 LYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTL 655

Query: 532 NISGT 536
            I G+
Sbjct: 656 LIDGS 660



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 207/387 (53%), Gaps = 14/387 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++ N L+  L K G  E  +  + EM+ + +  +L ++N ++NG CKAG L +A
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA 389

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  D+K  G+ P V+TYNILIDGYC+   +G +  A  + ++M E   LP+  T+  L
Sbjct: 390 LCLFGDLKRAGLGPTVLTYNILIDGYCR---LGDLEGARRLKEEMTEEDCLPDVCTYTIL 446

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G C   N++     F+EM S G+      YN+ I+     G +  A  LR+EMM  G+
Sbjct: 447 MNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGI 506

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + VT N LI+G CK   ++ A VL+  +   GL    +TY  LI A+C+ GR+ +A  
Sbjct: 507 SSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKN 566

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+  G+ P V TY   I    R GN+        +++  G+    VTYN+L+ ALC
Sbjct: 567 IFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALC 626

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G+++ A     EM    +    PN  TY +LI G C++G    A  L  E+ +KG+ P
Sbjct: 627 RMGRTESAYQHFHEML---ERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYN 532
           +  T+       + KGF    EGHMY+
Sbjct: 684 DHCTHN-----ALFKGF---GEGHMYD 702



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V   + EM  + +E +  ++N  ++     G +  A  + E+M   G+S   VTYN+LID
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G +   Y    ++  MV +G+  + VT+  LI   C+   +  A  +F+ M + G
Sbjct: 519 GLCKTGSLKDAY---VLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           ++  VVTY   I+  C  G L  A     +M+  G++PN VT N L++  C+    E A 
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             F ++ E+GL P+  TY  LID  CKEG    A  +   M  +G+ PD  T+N L  G 
Sbjct: 636 QHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695

Query: 410 SREGNVEGVRNIMN 423
                 + V+ + N
Sbjct: 696 GEGHMYDAVQYLEN 709



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H   + G+      IF  +   +  L  + +   + +  Y +    +L +  F++  +
Sbjct: 551 LIHAHCERGRLIEAKNIFDGM--VASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLE 608

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++ + ++ N L+ AL + G+ E     + EM  R +  N  ++  +++G CK G    
Sbjct: 609 EGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVH 668

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           A  +  +M   G+ P   T+N L  G+    G G MY A    +++V
Sbjct: 669 AIRLYCEMHQKGIHPDHCTHNALFKGF----GEGHMYDAVQYLENVV 711


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 226/445 (50%), Gaps = 11/445 (2%)

Query: 69   LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
            L   ++ ++  P I  F   L    K  KF  V  +FH +     S    S  I  L+  
Sbjct: 602  LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI--LIHC 659

Query: 126  YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
            + +  +  L      +    G + S+++   LL    +  +F++   +   M    +E N
Sbjct: 660  FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719

Query: 186  LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
            +  +N V+NGLCK   LN A +I   M+  G+    VTYN LI G C  G   +   A  
Sbjct: 720  VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG---RWTDAAR 776

Query: 246  VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
            + +DMV+  I PN + F  LID F K+ N+  A  +++EM    +   ++TYNSLING C
Sbjct: 777  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 306  VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            + G+L +A  + D M++ G  P+VVT N LI GFCK K VE    LF +++ QGL     
Sbjct: 837  IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 366  TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            TYNTLI  YC+ G++  A  + N M+D GV PD+ TYN L+  L   G +E    ++ +L
Sbjct: 897  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956

Query: 426  VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
              N M   ++TYNI++  +C++ K K+A  L      + ++    + + Y  +I G C+ 
Sbjct: 957  QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS---LTRKGVKLDAIAYITMISGLCRN 1013

Query: 486  GKLEDANGLLNELLEKGLIPNQTTY 510
            G   +A+ L   + E G +P++  Y
Sbjct: 1014 GLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 208/368 (56%), Gaps = 6/368 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++   ++L A+ K  KF+ V Y++ +M+   I  +L SF  +++  C+  + + A  ++
Sbjct: 614 SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT   L++G+C+     +  +A ++   M E G+ PN V +NT+I+G 
Sbjct: 674 GKMMKLGFQPSIVTLGSLLNGFCQGN---RFQEAVSLVDSMAELGLEPNVVIYNTVINGL 730

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+ +++ A+++F  M   GI A  VTYN+LI+GLC  G+  +A  L  +M+   + PNV
Sbjct: 731 CKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNV 790

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +   ALI+ F K+  + +A+ L+ ++  + + P+++TYN+LI+ +C +GR+ DA  M + 
Sbjct: 791 IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G  PDV TYN LI G  +   VE    +  E+ + G+     TYN L+   C+ GK
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A  + + M         P+IVTYN+L+   C  GK+E A  ++ +L +  +  +  T
Sbjct: 911 LNVAQKVFNRMVDCGVP---PDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 510 YQIVREEM 517
           Y I+ + M
Sbjct: 968 YNIIIQGM 975



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 214/400 (53%), Gaps = 42/400 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +LL A+    ++E V Y  ++M+   I  +L SF  +++  C+  +L+ A  I+
Sbjct: 64  SVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSIL 123

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L+ G+C +    +++ A ++   MV++G  PN V +NTLID  
Sbjct: 124 GKMMKLGYDPSIVTFGSLLHGFCLR---NRIHDAFSLVASMVKSGYEPNVVVYNTLIDCL 180

Query: 270 CKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGK------------------- 309
           CK+ +++ A+++  EM   G +AA +VTYN+L+ GLC  G+                   
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPD 240

Query: 310 ----------------LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
                           LDEA  L  +M+ S + PN VT N+LING C    +  A+  FD
Sbjct: 241 VFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFD 300

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            ++ +G  P+V+TYNTLI+ +CK  R+ED   +   M   G++ D  TYN LI G  + G
Sbjct: 301 LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG 360

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +   ++I + +V+ G+   ++T+ IL+  LC +G+   A+   ++M   E   K+  IV
Sbjct: 361 KLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE---KYLGIV 417

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            YN++I G C+  K+E+A  L   L  +G+ P+  TY I+
Sbjct: 418 AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIM 457



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 215/441 (48%), Gaps = 31/441 (7%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RLL ++   ++Y  +  F   + +F  +    S + + H    CS      SI+  M+ L
Sbjct: 70  RLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKL 129

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y                       S+++   LL       +  D   +   M +   E 
Sbjct: 130 GY---------------------DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKA 243
           N+  +N +++ LCK G +N A +++ +M+  G ++  +VTYN L+ G C  G   +  +A
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG---EWRQA 225

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + +DM +  I P+  TF  LID F K  N+  A +++++M    I    VTYNSLING
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+ G+L  A    D M + G  PNVVT N LINGFCK + VE    LF  +  +GL   
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TYNTLI  YC+ G++  A  + + M+  GV PD+ T+  L+ GL   G +       N
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFN 405

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++ +     G+V YNI++  LCK  K ++A  L     ++  E   P+  TY ++I G C
Sbjct: 406 DMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF---CRLPVEGVKPDARTYTIMILGLC 462

Query: 484 QKGKLEDANGLLNELLEKGLI 504
           + G   +A+ L   + E G+I
Sbjct: 463 KNGPRREADELFRRMKEDGII 483



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LR+ +   KF+D   ++ EM + R   ++  F  VL  + K  K +    +   M++LG+
Sbjct: 587 LRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGI 646

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           S  + ++ ILI  +C+     +   A A+   M++ G  P+ VT  +L++GFC+      
Sbjct: 647 SHDLYSFTILIHCFCR---CSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQE 703

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ + + M   G+   VV YN++INGLC +  L+ A+ +   M   G+  + VT N LI+
Sbjct: 704 AVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLIS 763

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G C       A  L  D+ ++ + P+VI +  LID + KEG + +A  +   M+ R V P
Sbjct: 764 GLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHP 823

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           ++ TYN LI G   +G +   +++ + +V+ G    +VTYN L+   CK  + +  + L 
Sbjct: 824 NILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 883

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            EM     +    +  TYN LI G+CQ GKL  A  + N +++ G+ P+  TY I+ + +
Sbjct: 884 CEM---THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 518 MEKGFI 523
              G I
Sbjct: 941 CNNGKI 946



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 7/359 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +FED   ++ EM + +   ++  F  +L  +    +        + M+  G+S  + ++ 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI  +C+     ++  A ++   M++ G  P+ VTF +L+ GFC    I  A  +   M
Sbjct: 105 ILIHCFCR---CSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKPNVVTSNALINGFCKKKL 344
              G    VV YN+LI+ LC +G ++ A+ L +EM   G L  ++VT N L+ G C    
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGE 221

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
             +A  +  D++++ ++P V T+  LIDA+ K+G +++A  +   ML   + P+  TYN 
Sbjct: 222 WRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNS 281

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL   G +   +   + + + G    +VTYN L+   CK  + +  + L   M++  
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR-- 339

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            E    +  TYN LI G+CQ GKL  A  + + ++  G+ P+  T+ I+   +   G I
Sbjct: 340 -EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 143/257 (55%), Gaps = 3/257 (1%)

Query: 147  LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
            +  +V+    L+   VKEG   + + +YKEM RR +  N+ ++N ++NG C  G+L  A 
Sbjct: 786  IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAK 845

Query: 207  DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
             + + M S G  P VVTYN LI G+CK   +    K   +F +M   G++ +  T+NTLI
Sbjct: 846  HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK---LFCEMTHQGLVGDAFTYNTLI 902

Query: 267  DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             G+C+   ++ A KVF  M   G+   +VTYN L++ LC +GK+++A+ + +++  + + 
Sbjct: 903  HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962

Query: 327  PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
             +++T N +I G C+   V++A  LF  ++ +G+    I Y T+I   C+ G   +A  +
Sbjct: 963  VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022

Query: 387  RNSMLDRGVLPDVSTYN 403
               M + G +P    Y+
Sbjct: 1023 CTRMKEDGFMPSERIYD 1039



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 167/360 (46%), Gaps = 25/360 (6%)

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE- 252
            G   + +   A D+  +M      P VV +  L+          + Y+    F   +E 
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANL----RRYETVIYFSQQMEL 93

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI  +  +F  LI  FC+   +S A+ +  +M   G    +VT+ SL++G C+  ++ +
Sbjct: 94  FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHD 153

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLI 371
           A +L   M+ SG +PNVV  N LI+  CK   V  A  L +++ ++G L+  ++TYNTL+
Sbjct: 154 AFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              C  G    A  +   M  R + PDV T+  LI    ++GN++  + +  +++ + + 
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              VTYN L+  LC  G+   A    D    M  +  +PN+VTYN LI GFC+  ++ED 
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFD---LMASKGCFPNVVTYNTLINGFCKSRRVEDG 330

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             L   +  +GL+ +  TY                  +   M+  G  PDI  H   + G
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 37/222 (16%)

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA--------------------- 373
           L  GF      E A  LF ++ +    PSV+ +  L+ A                     
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 374 --------------YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                         +C+  R+  A ++   M+  G  P + T+  L+ G      +    
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +++  +V +G    +V YN L+  LCK+G    A+ LL+EM K  K +   ++VTYN L+
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK--KGRLAADLVTYNTLL 213

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G C  G+   A  +L ++ ++ + P+  T+  + +  +++G
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 15/290 (5%)

Query: 12   ITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLH 71
            I+ L  +  W     TD   ++  +     DP +I  +F           +LL    L  
Sbjct: 762  ISGLCNSGRW-----TDAARLLRDMVKRKIDPNVI--FFTALIDTFVKEGNLLEAKNLYK 814

Query: 72   SLVVAKKYPKI---RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
             ++    +P I    S ++ F   G+      +F  +   S     + +  + L+  + K
Sbjct: 815  EMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM--VSKGCFPDVVTYNTLITGFCK 872

Query: 129  NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
            + +   G + F      GL     + N L+    + GK    + V+  M    +  ++ +
Sbjct: 873  SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932

Query: 189  FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            +N +L+ LC  GK+ KA  ++ED++   +   ++TYNI+I G C+     K+ +A  +F+
Sbjct: 933  YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRND---KVKEAWCLFR 989

Query: 249  DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
             +   G+  + + + T+I G C++     A K+   M   G       Y+
Sbjct: 990  SLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 218/391 (55%), Gaps = 12/391 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSFNFVLNG 195
            ++  + G +  V+S N LL+ L    + E+   +   M   +      ++ S+N V+NG
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
               G+++KA  +  +M   GVSP VVTYN +IDG CK   + +   A+ VF+ MVE G+
Sbjct: 203 FFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDR---AEDVFQQMVEKGV 256

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VT+NT+IDG CK + +  A  VF++M   G+    VTYN++I+GLC    +D A  
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  +M+  G+KP+ VT N +I+G CK + ++KA  +F  + ++G+ P  +TY  +ID  C
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K   ++ A  +   M+D+GV P+  TYNCLI G    G  E V   + E+  + +   + 
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY +L+  LCK+GK  +A SL D M    ++   P++  Y +++ G+ +KG L + + LL
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMI---RKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           N ++  G+ PN   +  V     ++  I ++
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEV 524



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 238/466 (51%), Gaps = 57/466 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + ++    K  +  +    F++  D G+K S ++ N ++  L K    +  E V+
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M  R ++ +  ++N +++GLCKA  ++KA  + + M   GV P  +TY I+IDG CK 
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + +   A+ VF+ M++ G+ PN  T+N LI G+         ++  +EM +H +   V
Sbjct: 379 QSVDR---AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS---------------------- 332
            TY  L++ LC +GK +EA +L D M+  G+KP+V                         
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 333 -------------NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                        N +I  + K+ ++++   +F  + +QGLSP+V+TY TLIDA CK GR
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++DA    N M++ GV P+   +N L+ GL      E V  +  E++N G+R  +V +N 
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++  LCK+G+  +A  L+D M  M  +   P++++YN LI G C   ++++A  LL+ ++
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLK---PDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 500 EKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGH 529
             GL PN  +Y  +                  EM+ KG  P +E +
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 229/443 (51%), Gaps = 8/443 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++  G++  V      +S  +  L  +     +L+    KN K +     F     
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMS--AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR 463

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K SV     +L    K+G   ++  +   M    I  N   FN V+    K   +++
Sbjct: 464 KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE 523

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              I   MK  G+SP VVTY  LID  CK   +G++  A   F  M+  G+ PN V FN+
Sbjct: 524 VMHIFIKMKQQGLSPNVVTYGTLIDALCK---LGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C  +      ++F EM + GI   +V +N+++  LC +G++ EA  L D M+  G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           LKP+V++ N LI+G C    +++A  L D +   GL P++++YNTL+  YCK GR+++A+
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ML +GV P V TYN ++ GL R G     R +   ++ +     + TY+I++   
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGF 760

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+    +A  +   +  M+ +    +I+T+N++I G  + G+ EDA  L   +   GL+
Sbjct: 761 CKNNCFDEAFKIFQSLCSMDLQL---DIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLV 817

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
           P+  TY+++ E ++E+G + +++
Sbjct: 818 PSVVTYRLIAENLIEEGSLEELD 840



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 237/461 (51%), Gaps = 17/461 (3%)

Query: 69  LLHSLVVAKKY---PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           LLH +V  +     P + S+   ++ F   G+     ++F  +    D +  N+II  + 
Sbjct: 177 LLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLC 236

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
               V   +     + F++  + G+K + ++ N ++  L K  + +  E V+++M  + +
Sbjct: 237 KAQEVDRAE-----DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV 291

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + +  ++N +++GLCKA  +++A  + + M   GV P  VTYN +IDG CK   I K   
Sbjct: 292 KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDK--- 348

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A+ VF+ M++ G+ P+ +T+  +IDG CK +++  A  VF++M   G+     TYN LI+
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G    G+ +E V    EM A  L+P+V T   L++  CK     +AR LFD +  +G+ P
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           SV  Y  ++  Y K+G + +   + N M+  G+ P+   +N +I   ++   ++ V +I 
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            ++   G+   +VTY  L+ ALCK G+   AV   ++M     E   PN V +N L+ G 
Sbjct: 529 IKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI---NEGVTPNNVVFNSLVYGL 585

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           C   K E    L  E+L +G+ P+   +  V   + ++G +
Sbjct: 586 CTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 238/486 (48%), Gaps = 29/486 (5%)

Query: 45  LILRYFCWSTK--ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVS 99
           L+L Y C + K  E R+         L  S++     P +  +   LH + K G  + + 
Sbjct: 440 LLLDYLCKNGKCNEARS---------LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 100 TIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
            + + +   ++ +  N  I + ++ AY K          F +    GL  +V++   L+ 
Sbjct: 491 DLLNLM--VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           AL K G+ +D    + +M    +  N   FN ++ GLC   K  K  ++  +M + G+ P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            +V +N ++   CK+G   ++ +A  +   MV  G+ P+ +++NTLIDG C    +  A+
Sbjct: 609 DIVFFNTVLCNLCKEG---RVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           K+ + M S G+   +V+YN+L++G C  G++D A  L  EM+  G+ P V T N ++NG 
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            +     +AR L+ ++ +     S+ TY+ ++D +CK    ++AF +  S+    +  D+
Sbjct: 726 FRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDI 785

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            T+N +I GL + G  E   ++   +  NG+   +VTY ++   L ++G  ++    LD 
Sbjct: 786 ITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE----LDC 841

Query: 460 MFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----- 513
           +F  MEK    PN    N LI+    +G++  A   L++L EK      +T  ++     
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFS 901

Query: 514 REEMME 519
           REE  +
Sbjct: 902 REEYQQ 907



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 175/316 (55%), Gaps = 13/316 (4%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+P   TY+I+I  +C+   IG++    A F  +++ G   +++  N L+ G C  + + 
Sbjct: 80  VAPDCCTYSIVIGCFCR---IGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136

Query: 277 AAMKV-FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM---ASGLKPNVVTS 332
            AM V   +M   G   GVV+YN+L+ GLC   + +EA  L   M+    S   P+VV+ 
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N +INGF  +  V+KA  LF    E G+SP V+TYNT+ID  CK   ++ A  +   M++
Sbjct: 197 NIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +GV P+  TYN +I GL +   V+    +  ++V+ G++   VTYN ++  LCK     +
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  +  +M  +++  K P+ VTYN +I G C+   ++ A G+  ++++KG+ P+  TY I
Sbjct: 314 AEGVFQQM--IDRGVK-PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 513 VREEMMEKGFIPDIEG 528
           + + + +   +   EG
Sbjct: 371 IIDGLCKAQSVDRAEG 386



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 192/425 (45%), Gaps = 54/425 (12%)

Query: 68  RLLHSLVVA-KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           R+ ++++ A  K   I   +H+F+K  K   +S       T  D+LC+   + D ++   
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVL--- 561

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
                       F +  + G+  + +  N L+  L    K+E VE ++ EM  + I  ++
Sbjct: 562 -----------QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
             FN VL  LCK G++ +A  +++ M  +G+ P V++YN LIDG+C      +M +A  +
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS---RMDEAVKL 667

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              MV  G+ PN V++NTL+ G+CK   I  A  +F EM   G+  GV TYN+++NGL  
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 307 DGKLDEAVALRDEMMAS-----------------------------------GLKPNVVT 331
            G+  EA  L   M+ S                                    L+ +++T
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIIT 787

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+G  K    E A  LF  I   GL PSV+TY  + +   +EG +E+   + + M 
Sbjct: 788 FNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME 847

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  P+    N LI  L   G +      +++L          T ++L+    ++   +
Sbjct: 848 KSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQ 907

Query: 452 KAVSL 456
            A SL
Sbjct: 908 HAKSL 912



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 150/294 (51%), Gaps = 28/294 (9%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N + P+  T++ +I  FC+   +      F  +   G     +  N L+ GLC   ++ E
Sbjct: 78  NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE 137

Query: 313 AV-ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD---DISEQGLSPSVITYN 368
           A+  L  +M   G +  VV+ N L+ G C ++  E+AR L     D  +   SP V++YN
Sbjct: 138 AMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +I+ +  EG+++ A+++    L+ GV PDV TYN +I GL +   V+   ++  ++V  
Sbjct: 198 IVINGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGK 487
           G++   VTYN ++  LCK     + V + + +F KM  +   P+ VTYN +I G C+   
Sbjct: 255 GVKPNNVTYNTIIDGLCK----AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           ++ A G+  +++++G+ P+  TY                  V ++M++KG  PD
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 26/259 (10%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV- 345
           S+ +A    TY+ +I   C  G+L+   A    ++ +G + + +  N L+ G C  K V 
Sbjct: 77  SNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD---RGVLPDVSTY 402
           E   VL   + E G    V++YNTL+   C   R E+A  + + M+D       PDV +Y
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I G   EG V+   ++  E+   G+   +VTYN ++  LCK  +  +A  +  +M  
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM-- 251

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---------- 512
           +EK  K PN VTYN +I G C+  +++ A G+  ++++KG+ P+  TY            
Sbjct: 252 VEKGVK-PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 513 ------VREEMMEKGFIPD 525
                 V ++M+++G  PD
Sbjct: 311 VDRAEGVFQQMIDRGVKPD 329



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 28/240 (11%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV-------LFDDISEQGLSP 362
           L +A+ L DE++      +V   N L++   + K    +++       +  D S + ++P
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK-VAP 82

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNI 421
              TY+ +I  +C+ GR+E  FA    +L  G   D    N L+ GL     V E +  +
Sbjct: 83  DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVL 142

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + ++   G R G+V+YN L+  LC   ++++A  LL  M   +     P++V+YN++I G
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           F  +G+++ A  L    LE G+ P+  TY                  V ++M+EKG  P+
Sbjct: 203 FFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLC---VDGKLDEAVALRDEMM---ASGLKPNVVT 331
           A+K+F+E+  H   A V   N L++ +           AV+  + M+   ++ + P+  T
Sbjct: 27  ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCT 86

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF-AMRNSM 390
            + +I  FC+   +E     F  I + G     I  N L+   C   R+ +A   +   M
Sbjct: 87  YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQM 146

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN---NGMRAGLVTYNILVGALCKD 447
            + G    V +YN L+ GL      E  R +++ +V+   +     +V+YNI++     +
Sbjct: 147 PEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNE 206

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+  KA SL  EM         P++VTYN +I G C+  +++ A  +  +++EKG+ PN 
Sbjct: 207 GQVDKAYSLFLEM------GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260

Query: 508 TTYQIV 513
            TY  +
Sbjct: 261 VTYNTI 266


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 215/377 (57%), Gaps = 6/377 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +V S N L+  L +    +    V  +M +  I+ +  +FN ++NGLC  GK+ +
Sbjct: 125 FGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKE 184

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  +  +M   G  P V++YN +I+G CK G       A  VF+ M +N   PN VT+NT
Sbjct: 185 AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNT---IMAVRVFRKMEQNRGKPNVVTYNT 241

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CKD  ++ A++   EM   GI   VVTYN++++G C  G+L+EA  L  EM+   
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+ VT N L++G CK+ +V +AR + + ++E+G  P+  TYN L+D YC   +M++A 
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M+ +G  P++S+YN LI G  +   +   + +++E+    +    VTY+ L+  L
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G+ ++A++L  EM         P+++ Y++L+ GFC+ G L++A  LL E+ E+ + 
Sbjct: 422 CQVGRPREALNLFKEMC---SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478

Query: 505 PNQTTYQIVREEMMEKG 521
           PN   Y I+   M   G
Sbjct: 479 PNIILYTILIRGMFIAG 495



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 216/374 (57%), Gaps = 6/374 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V+S N ++  L K G       V+++M++ R + N+ ++N +++ LCK   +N+A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + + +M   G+ P VVTYN ++ G+C    +G++ +A  +FK+MV   ++P+ VTFN L
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCS---LGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK+  +S A  V E M   G      TYN+L++G C+  ++DEA+ +   M+  G 
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+ + N LING+CK K + +A+ L  ++SE+ L+P  +TY+TL+   C+ GR  +A  
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G+LPD+  Y+ L+ G  + G+++    ++ E+    ++  ++ Y IL+  + 
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             GK + A  L     K+  +   P+I TYNV+IKG  ++G  ++A     ++ + G +P
Sbjct: 493 IAGKLEVAKELFS---KLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 506 NQTTYQIVREEMME 519
           +  +Y ++ +  ++
Sbjct: 550 DSCSYNVIIQGFLQ 563



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 213/399 (53%), Gaps = 6/399 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++    KN    +    F++      K +V++ N ++ +L K+    +     
Sbjct: 200 NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFL 259

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  R I  ++ ++N +L+G C  G+LN+A+ + ++M    V P  VT+NIL+DG CK+
Sbjct: 260 SEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKE 319

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A  V + M E G  PN  T+N L+DG+C    +  A+KV   M   G A  +
Sbjct: 320 GMVS---EARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            +YN LING C   +++EA  L  EM    L P+ VT + L+ G C+     +A  LF +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   GL P ++ Y+ L+D +CK G +++A  +   M +R + P++  Y  LI G+   G 
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E  + + ++L  +G+R  + TYN+++  L K+G S +A        KME +   P+  +
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFR---KMEDDGFLPDSCS 553

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           YNV+I+GF Q      A  L++E++ K    + +T+Q++
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQML 592



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 194/375 (51%), Gaps = 22/375 (5%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D    +  M R     ++  F   L  + K  + + A  +   M   GV+  V + N+L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  C+   +  +  A +V   M + GI P+ +TFNTLI+G C +  I  A+ +F EM  
Sbjct: 138 INCLCR---LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    V++YN++INGLC +G    AV +  +M  +  KPNVVT N +I+  CK +LV +
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A     ++ ++G+ P V+TYNT++  +C  G++ +A  +   M+ R V+PD  T+N L+ 
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL +EG V   R +   +   G      TYN L+   C   +  +A+ +L  M     + 
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI---GKG 371

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--------QIVR----- 514
             PN+ +YN+LI G+C+  ++ +A  LL+E+ EK L P+  TY        Q+ R     
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431

Query: 515 ---EEMMEKGFIPDI 526
              +EM   G +PD+
Sbjct: 432 NLFKEMCSSGLLPDL 446



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 194/379 (51%), Gaps = 22/379 (5%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +R F  M    GK   V+      +T  DSLC++ ++ +                E    
Sbjct: 221 VRVFRKMEQNRGKPNVVT-----YNTIIDSLCKDRLVNE--------------AVEFLSE 261

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             D G+   V++ N +L      G+  +   ++KEM  R +  +  +FN +++GLCK G 
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A  + E M   G  P   TYN L+DGYC      +M +A  V   M+  G  PN  +
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN---QMDEAIKVLGIMIGKGCAPNLSS 378

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N LI+G+CK + ++ A ++  EM    +    VTY++L+ GLC  G+  EA+ L  EM 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           +SGL P+++  + L++GFCK   +++A  L  ++ E+ + P++I Y  LI      G++E
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + + +   G+ PD+ TYN +I GL +EG  +       ++ ++G      +YN+++
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558

Query: 442 GALCKDGKSKKAVSLLDEM 460
               ++  S  A+ L+DEM
Sbjct: 559 QGFLQNQDSSTAIQLIDEM 577



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 134/254 (52%), Gaps = 3/254 (1%)

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D +I  A+  F  M        VV +   +  +    +   AV+L ++M   G+  NV +
Sbjct: 74  DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LIN  C+   V+ A  +   + + G+ P  IT+NTLI+  C EG++++A  + N M+
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  P+V +YN +I GL + GN      +  ++  N  +  +VTYN ++ +LCKD    
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +AV  L EM         P++VTYN ++ GFC  G+L +A  L  E++ + ++P+  T+ 
Sbjct: 254 EAVEFLSEMV---DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310

Query: 512 IVREEMMEKGFIPD 525
           I+ + + ++G + +
Sbjct: 311 ILVDGLCKEGMVSE 324



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 3/227 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++ S N L+    K  +  + + +  EM  + +  +  +++ ++ GLC+ G+  +A
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M S G+ P ++ Y+IL+DG+CK G + +  K   + K+M E  I PN + +  L
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK---LLKEMHERRIKPNIILYTIL 487

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G      +  A ++F ++ + GI   + TYN +I GL  +G  DEA     +M   G 
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            P+  + N +I GF + +    A  L D++  +  S    T+  L+D
Sbjct: 548 LPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 223/424 (52%), Gaps = 33/424 (7%)

Query: 122 LMLAYVKNMKPH-LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+L     ++PH      + R     L  S  S + LL AL     F     ++ +M R 
Sbjct: 422 LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRL 477

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R+ L   +FN +L  LC AGK  +A +++  M      P  VTYN +I G+C +G   ++
Sbjct: 478 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG---RV 530

Query: 241 YKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYN 298
             A  + ++M E G I PN+ T+ T+I G+CK   +  A+KVF+EM + G +    V YN
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 590

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C  GKLD A+  RD M+  G+   V T N L++         +A  L +++  +
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+P V TYN LI+ +CKEG ++ A  +  +M  RGV   V TY  LI  LS++G V+  
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + +E V  G+R  LV YN L+ +    G   +A  ++ EM   EK++  P+ VTYN L
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM---EKKRIAPDDVTYNTL 767

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           ++G C  G++++A  L++E+ E+G+ P+  TY                  +R EMM KGF
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 523 IPDI 526
            P +
Sbjct: 828 NPTL 831



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 204/386 (52%), Gaps = 41/386 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKAS 206
           + + ++ N ++      G+ +    + +EM+ R  I  N  ++  V++G CK G++++A 
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570

Query: 207 DIMEDMKSLG-VSPKVVTYNILIDGYCKKGGI---------------------------- 237
            + ++M + G V P+ V YN LI GYC +G +                            
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 630

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+  +A  + ++M   G+ P+  T+N LI+G CK+ N+  A+++FE M   G+ A 
Sbjct: 631 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 690

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTY +LI  L   G++ E   L DE +  G++P++V  NALIN       +++A  +  
Sbjct: 691 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 750

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ ++ ++P  +TYNTL+   C  GR+++A  + + M +RG+ PD+ TYN LI+G S +G
Sbjct: 751 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +V+    I NE++N G    L+TYN L+  LCK+G+   A +++ EM    +    P+  
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV---ENGITPDDS 867

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELL 499
           TY  LI+G       ED   + +E L
Sbjct: 868 TYISLIEGLTT----EDERAIDDERL 889



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 168/302 (55%), Gaps = 5/302 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKE-MKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           +K   +  N L+     +GK  D   +Y++ M  R + + + ++N +++ L   G+  +A
Sbjct: 582 VKPEAVMYNALIGGYCDQGKL-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 640

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++E+M   G++P V TYNILI+G+CK+G + K  +   +F++M   G+    VT+  L
Sbjct: 641 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE---IFENMSRRGVRATVVTYTAL 697

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K   +    K+F+E    GI   +V YN+LIN     G +D A  +  EM    +
Sbjct: 698 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ VT N L+ G C    V++AR L D+++E+G+ P ++TYNTLI  Y  +G ++DA  
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +RN M+++G  P + TYN LI GL + G  +   N++ E+V NG+     TY  L+  L 
Sbjct: 818 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 877

Query: 446 KD 447
            +
Sbjct: 878 TE 879



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/272 (37%), Positives = 159/272 (58%), Gaps = 3/272 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G+  +V + N L+ AL  +G+  +   + +EM  + +  ++ ++N ++NG CK G
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 670

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            + KA +I E+M   GV   VVTY  LI    KKG   ++ + D +F + V  GI P+ V
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKG---QVQETDKLFDEAVRRGIRPDLV 727

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            +N LI+      NI  A ++  EM    IA   VTYN+L+ GLC+ G++DEA  L DEM
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 787

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              G++P++VT N LI+G+  K  V+ A  + +++  +G +P+++TYN LI   CK G+ 
Sbjct: 788 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 847

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           +DA  M   M++ G+ PD STY  LI GL+ E
Sbjct: 848 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 138/255 (54%), Gaps = 5/255 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H    +G+ T    +   +      L  +    ++L+  + K        E F+    
Sbjct: 627 LVHALFMDGRGTEAYELVEEMG--GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++++V++   L+ AL K+G+ ++ + ++ E  RR I  +L  +N ++N    +G +++
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +IM +M+   ++P  VTYN L+ G C    +G++ +A  +  +M E GI P+ VT+NT
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCL---LGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+    ++  A+++  EM + G    ++TYN+LI GLC +G+ D+A  +  EM+ +G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 325 LKPNVVTSNALINGF 339
           + P+  T  +LI G 
Sbjct: 862 ITPDDSTYISLIEGL 876


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 225/436 (51%), Gaps = 49/436 (11%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  +    K       F +    GL   V++   LL  L  E +  +    + +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-- 237
                N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CKKG    
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+   A  +F +M E GI P+  T+N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T +++I+GFCK+  ++ A  +F  ++ +G SP++IT+NTLID YC   R++D   +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M + G++ D +TYN LI G    G++    +++ E++++G+   +VT + L+  LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 447 DGKSKKAVSLLDEMFK-MEKEKK-----------WPNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK M+K KK            P++ TYN+LI G   +GK  +A  L
Sbjct: 478 NGKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 495 LNELLEKGLIPNQTTY 510
             E+  +G++P+  TY
Sbjct: 534 YEEMPHRGIVPDTITY 549



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 253/506 (50%), Gaps = 59/506 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII------DML 122
           LLH L V  +  +   F H   +     +V T     +T  + LCR   I+      D +
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVT----FTTLMNGLCREGRIVEAVALLDRM 210

Query: 123 MLAYVKNMKPHLG--FEAFKRAGDY--------------GLKSSVLSCNQLLRALVKEGK 166
           M   ++  +   G   +   + GD                +  +V+  + ++ +L K+G+
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M    +SP VVTYN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI+ + K+G   K ++A+ ++ +M+  GI+PN +T++++IDGFCK   + AA  +F  M 
Sbjct: 331 LINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G +  ++T+N+LI+G C   ++D+ + L  EM  +GL  +  T N LI+GF     + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM------LD-----RGV 395
            A  L  ++   GL P ++T +TL+D  C  G+++DA  M   M      LD      GV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PDV TYN LI+GL  EG       +  E+ + G+    +TY+ ++  LCK  +  +A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--- 512
           + D    M  +   PN+VT+  LI G+C+ G+++D   L  E+  +G++ N  TY     
Sbjct: 568 MFD---SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 513 -------------VREEMMEKGFIPD 525
                        + +EM+  G  PD
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 205/395 (51%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SFN ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+  L+ G C +    ++ +A   F  M E    PN VTF TL++G 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVE---DRVSEALDFFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TY+ ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    + MF +   K   PN++T+N LI G+C   +++D   LL+E+ E GL+ + 
Sbjct: 375 RLDAA----EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
           TTY                  + +EM+  G  PDI
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ ++M   G+ P  +TY+ +IDG+CK+    ++  A+ +F  M   G  PN
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ---NRLDAAEHMFYLMATKGCSPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TFNTLIDG+C  + I   M++  EM   G+ A   TYN+LI+G  + G L+ A+ L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           EM++SGL P++VT + L++G C    ++ A  +F  + +            G+ P V TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    + + + +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+  L+   CK G+    + L  E   M +     N +TY  LI GF + G 
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCE---MGRRGIVANAITYITLICGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           +  A  +  E++  G+ P+  T +
Sbjct: 632 INGALDIFQEMISSGVYPDTITIR 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 198/363 (54%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  N  +++ +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M + G SP ++T+N LIDGYC   G  ++     +  +M E G++ +  T+NTLI
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYC---GAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GF    +++AA+ + +EM S G+   +VT ++L++GLC +GKL +A+ +   M  S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V T N LI+G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M +SM  +   P+V T+  LI G  + G V+    +  E+   G+ A  +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+    K G    A+ +  EM        +P+ +T   ++ G   K +L+ A  +L
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 496 NEL 498
            +L
Sbjct: 675 EKL 677



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 175/339 (51%), Gaps = 14/339 (4%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDMVENGILPN 258
           L  A D+  DM      P VV +  L+      G + +M + D V   ++ M    I  +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             +FN LI  FC    +  A+  F ++   G+   VVT+ +L++GLCV+ ++ EA+    
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T++D  CK+G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 379 RMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
               A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G+   L TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  +A  L +E
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           +L +G+IPN  TY  + +   ++  + D   HM+ +  T
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 388



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 18/278 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ + N LI  FC    +  A   F  I++ GL P V+T+ TL+   C E R+ +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M   E     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+ 
Sbjct: 230 CKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           P+  TY                + + +EM+E+   PD+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 14/226 (6%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY-----------GLKSSVLSCNQL 157
           S  LC + +  D L+     N K     E FK                G++  V + N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +  L+ EGKF + E +Y+EM  R I  +  +++ +++GLCK  +L++A+ + + M S   
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP VVT+  LI+GYCK G +    +   +F +M   GI+ N +T+ TLI GF K  NI+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGRRGIVANAITYITLICGFRKVGNING 634

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           A+ +F+EM S G+    +T  +++ GL    +L  AVA+ +++  S
Sbjct: 635 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 225/435 (51%), Gaps = 49/435 (11%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  +    K       F +    GL   V++ N LL  L  E +  +   ++ +M   
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
               N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK G     
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSA 238

Query: 238 ------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLID 267
                                         G+   A  +F +M E GI P+  T+N++I 
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +T +++I+GFCK+  ++ A  +F  ++ +G SP++IT+NTLID YC   R++D   + 
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M + G++ D +TYN LI G    G++    +++ E++++G+   +VT + L+  LC +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 448 GKSKKAVSLLDEMFK-MEKEKK-----------WPNIVTYNVLIKGFCQKGKLEDANGLL 495
           GK K A+    EMFK M+K KK            P++ TYN+LI G   +GK  +A  L 
Sbjct: 479 GKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 496 NELLEKGLIPNQTTY 510
            E+  +G++P+  TY
Sbjct: 535 EEMPHRGIVPDTITY 549



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 217/398 (54%), Gaps = 33/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L K+G+  D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             +SP VVTYN LI+ + K+G   K ++A+ ++ +M+  GI+PN +T++++IDGFCK   
Sbjct: 319 RKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  +F  M + G +  ++T+N+LI+G C   ++D+ + L  EM  +GL  +  T N 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM---- 390
           LI+GF     +  A  L  ++   GL P ++T +TL+D  C  G+++DA  M   M    
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 391 --LD-----RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             LD      GV PDV TYN LI+GL  EG       +  E+ + G+    +TY+ ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  +  +A  + D    M  +   PN+VT+  LI G+C+ G+++D   L  E+  +G+
Sbjct: 556 LCKQSRLDEATQMFD---SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
           + N  TY                  + +EM+  G  PD
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 206/395 (52%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SF  ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+N L+ G C +    ++ +A  +F  M E    PN VTF TL++G 
Sbjct: 138 GKITKLGLHPDVVTFNTLLHGLCVE---DRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TY+ ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    + MF +   K   PN++T+N LI G+C   +++D   LL+E+ E GL+ + 
Sbjct: 375 RLDAA----EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
           TTY                  + +EM+  G  PDI
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ ++M   G+ P  +TY+ +IDG+CK+    ++  A+ +F  M   G  PN
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ---NRLDAAEHMFYLMATKGCSPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TFNTLIDG+C  + I   M++  EM   G+ A   TYN+LI+G  + G L+ A+ L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           EM++SGL P++VT + L++G C    ++ A  +F  + +            G+ P V TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    + + + +
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+  L+   CK G+    + L  E   M +     N +TY  LI GF + G 
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCE---MGRRGIVANAITYITLICGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           +  A  +  E++  G+ P+  T +
Sbjct: 632 INGALDIFQEMISSGVYPDTITIR 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 198/363 (54%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  N  +++ +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M + G SP ++T+N LIDGYC   G  ++     +  +M E G++ +  T+NTLI
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYC---GAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GF    +++AA+ + +EM S G+   +VT ++L++GLC +GKL +A+ +   M  S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V T N LI+G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M +SM  +   P+V T+  LI G  + G V+    +  E+   G+ A  +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+    K G    A+ +  EM        +P+ +T   ++ G   K +L+ A  +L
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 496 NEL 498
            +L
Sbjct: 675 EKL 677



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 178/347 (51%), Gaps = 14/347 (4%)

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDM 250
           +G  +   L  A D+  DM      P VV +  L+      G + +M + D V   ++ M
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKM 105

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
               I  +  +F  LI  FC    +  A+  F ++   G+   VVT+N+L++GLCV+ ++
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+ L  +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T+
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 371 IDAYCKEGRMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +D  CK G    A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   L TYN ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFF 342

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           +A  L +E+L +G+IPN  TY  + +   ++  + D   HM+ +  T
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 388



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 20/279 (7%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ +   LI  FC    +  A   F  I++ GL P V+T+NTL+   C E R+ +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEK-EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           CK G +   VS LD + KME+     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+
Sbjct: 230 CKIGDT---VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 504 IPNQTTY----------------QIVREEMMEKGFIPDI 526
            P+  TY                + + +EM+E+   PD+
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 16/251 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H F   G   +   +   +   S  LC + +  D L+     N K     E FK   
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 144 DY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                        G++  V + N L+  L+ EGKF + E +Y+EM  R I  +  +++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCK  +L++A+ + + M S   SP VVT+  LI+GYCK G +    +   +F +M  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR 609

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI+ N +T+ TLI GF K  NI+ A+ +F+EM S G+    +T  +++ GL    +L  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 313 AVALRDEMMAS 323
           AVA+ +++  S
Sbjct: 670 AVAMLEKLQMS 680


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 223/424 (52%), Gaps = 33/424 (7%)

Query: 122 LMLAYVKNMKPH-LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+L     ++PH      + R     L  S  S + LL AL     F     ++ +M R 
Sbjct: 427 LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRL 482

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R+ L   +FN +L  LC AGK  +A +++  M      P  VTYN +I G+C +G   ++
Sbjct: 483 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG---RV 535

Query: 241 YKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYN 298
             A  + ++M E G I PN+ T+ T+I G+CK   +  A+KVF+EM + G +    V YN
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 595

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C  GKLD A+  RD M+  G+   V T N L++         +A  L +++  +
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+P V TYN LI+ +CKEG ++ A  +  +M  RGV   V TY  LI  LS++G V+  
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + +E V  G+R  LV YN L+ +    G   +A  ++ EM   EK++  P+ VTYN L
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM---EKKRIAPDDVTYNTL 772

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           ++G C  G++++A  L++E+ E+G+ P+  TY                  +R EMM KGF
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 523 IPDI 526
            P +
Sbjct: 833 NPTL 836



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 209/403 (51%), Gaps = 45/403 (11%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSF 189
           KP    E  ++      + + ++ N ++      G+ +    + +EM+ R  I  N  ++
Sbjct: 503 KPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGI----------- 237
             V++G CK G++++A  + ++M + G V P+ V YN LI GYC +G +           
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G+  +A  + ++M   G+ P+  T+N LI+G CK+ N+ 
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+++FE M   G+ A VVTY +LI  L   G++ E   L DE +  G++P++V  NALI
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N       +++A  +  ++ ++ ++P  +TYNTL+   C  GR+++A  + + M +RG+ 
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TYN LI+G S +G+V+    I NE++N G    L+TYN L+  LCK+G+   A ++
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           + EM    +    P+  TY  LI+G       ED   + +E L
Sbjct: 859 VKEMV---ENGITPDDSTYISLIEGLTT----EDERAIDDERL 894



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 138/255 (54%), Gaps = 5/255 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H    +G+ T    +   +      L  +    ++L+  + K        E F+    
Sbjct: 632 LVHALFMDGRGTEAYELVEEMG--GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++++V++   L+ AL K+G+ ++ + ++ E  RR I  +L  +N ++N    +G +++
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +IM +M+   ++P  VTYN L+ G C    +G++ +A  +  +M E GI P+ VT+NT
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCL---LGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+    ++  A+++  EM + G    ++TYN+LI GLC +G+ D+A  +  EM+ +G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 325 LKPNVVTSNALINGF 339
           + P+  T  +LI G 
Sbjct: 867 ITPDDSTYISLIEGL 881


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 223/424 (52%), Gaps = 33/424 (7%)

Query: 122 LMLAYVKNMKPH-LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+L     ++PH      + R     L  S  S + LL AL     F     ++ +M R 
Sbjct: 53  LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRL 108

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R+ L   +FN +L  LC AGK  +A +++  M      P  VTYN +I G+C +G   ++
Sbjct: 109 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG---RV 161

Query: 241 YKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYN 298
             A  + ++M E G I PN+ T+ T+I G+CK   +  A+KVF+EM + G +    V YN
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C  GKLD A+  RD M+  G+   V T N L++         +A  L +++  +
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+P V TYN LI+ +CKEG ++ A  +  +M  RGV   V TY  LI  LS++G V+  
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + +E V  G+R  LV YN L+ +    G   +A  ++ EM   EK++  P+ VTYN L
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM---EKKRIAPDDVTYNTL 398

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           ++G C  G++++A  L++E+ E+G+ P+  TY                  +R EMM KGF
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 523 IPDI 526
            P +
Sbjct: 459 NPTL 462



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 209/403 (51%), Gaps = 45/403 (11%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSF 189
           KP    E  ++      + + ++ N ++      G+ +    + +EM+ R  I  N  ++
Sbjct: 129 KPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 184

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGI----------- 237
             V++G CK G++++A  + ++M + G V P+ V YN LI GYC +G +           
Sbjct: 185 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 244

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G+  +A  + ++M   G+ P+  T+N LI+G CK+ N+ 
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+++FE M   G+ A VVTY +LI  L   G++ E   L DE +  G++P++V  NALI
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N       +++A  +  ++ ++ ++P  +TYNTL+   C  GR+++A  + + M +RG+ 
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TYN LI+G S +G+V+    I NE++N G    L+TYN L+  LCK+G+   A ++
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           + EM    +    P+  TY  LI+G       ED   + +E L
Sbjct: 485 VKEMV---ENGITPDDSTYISLIEGLTT----EDERAIDDERL 520



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 139/258 (53%), Gaps = 5/258 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H    +G+ T    +   +      L  +    ++L+  + K        E F+    
Sbjct: 258 LVHALFMDGRGTEAYELVEEMG--GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++++V++   L+ AL K+G+ ++ + ++ E  RR I  +L  +N ++N    +G +++
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +IM +M+   ++P  VTYN L+ G C    +G++ +A  +  +M E GI P+ VT+NT
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCL---LGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+    ++  A+++  EM + G    ++TYN+LI GLC +G+ D+A  +  EM+ +G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 325 LKPNVVTSNALINGFCKK 342
           + P+  T  +LI G   +
Sbjct: 493 ITPDDSTYISLIEGLTTE 510


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 212/384 (55%), Gaps = 16/384 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA- 205
           L   V++ N+L+  L K+G   + E +  ++ +R +  NL +FN  + GLC+ G L++A 
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAV 271

Query: 206 --------SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
                    + +  M + G  P  +TYN +IDGYCKKG +     A+ V KD V  G  P
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV---QDANRVLKDAVFKGFKP 328

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +E T+ +LI+GFCKD +   AM VF++    G+   +V YN+LI GL   G +  A+ L 
Sbjct: 329 DEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLM 388

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           +EM  +G  PN+ T N +ING CK   V  A  L DD   +G  P + TYNTLID YCK+
Sbjct: 389 NEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQ 448

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            +++ A  M N M  +G+ PDV TYN L+ GL + G  E V  I   +   G    ++TY
Sbjct: 449 LKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITY 508

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NI+V +LCK  K  +AV LL E   M+ +   P++V++  L  GFC+ G ++ A  L   
Sbjct: 509 NIIVDSLCKAKKVNEAVDLLGE---MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 498 LLEKGLIPNQT-TYQIVREEMMEK 520
           + ++  + + T TY I+     E+
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQ 589



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 220/393 (55%), Gaps = 11/393 (2%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           ++ K  +P+      +   + G  S+ ++   ++  L   G+ +    ++ EM  R +  
Sbjct: 155 SFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCP 214

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------G 238
           ++ +FN +++ LCK G + ++  ++  +   GV P + T+NI + G C++G +       
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNS 274

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A+   + MV  G  P+++T+N++IDG+CK   +  A +V ++    G      TY 
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           SLING C DG  D A+A+  + +  GL+P++V  N LI G  ++ L+  A  L ++++E 
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P++ TYN +I+  CK G + DA  + +  + +G  PD+ TYN LI G  ++  ++  
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNV 477
             ++N + + GM   ++TYN L+  LCK GKS++ +    E+FK ME++   PNI+TYN+
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM----EIFKAMEEKGCTPNIITYNI 510

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++   C+  K+ +A  LL E+  KGL P+  ++
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSF 543



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 33/430 (7%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M  Y +  K     + F+R   Y    SV S N ++  LV+ G       VY  M+ R +
Sbjct: 83  MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + ++ ++   +   CK  +   A  ++ +M  LG     V Y  ++ G       G+   
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS---GEHDH 199

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +F +M+   + P+ V FN L+   CK   +  + ++  ++   G+   + T+N  + 
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 303 GLCVDGKLDEAVA----------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           GLC +G LD AV           LR +M+  G +P+ +T N++I+G+CKK +V+ A  + 
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLR-KMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D   +G  P   TY +LI+ +CK+G  + A A+    L +G+ P +  YN LI GLS++
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G +     +MNE+  NG    + TYN+++  LCK G    A  L+D+      +   P+I
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI---AKGCPPDI 435

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---------REEMM----- 518
            TYN LI G+C++ KL+ A  ++N +  +G+ P+  TY  +          EE+M     
Sbjct: 436 FTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKA 495

Query: 519 --EKGFIPDI 526
             EKG  P+I
Sbjct: 496 MEEKGCTPNI 505



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 203/409 (49%), Gaps = 14/409 (3%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K+  P      FK     GL+ S++  N L++ L ++G       +  EM    
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++N V+NGLCK G ++ AS +++D  + G  P + TYN LIDGYCK+    K+ 
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQ---LKLD 452

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +   M   G+ P+ +T+NTL++G CK       M++F+ M   G    ++TYN ++
Sbjct: 453 SATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIV 512

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GL 360
           + LC   K++EAV L  EM + GLKP+VV+   L  GFCK   ++ A  LF  + +Q  +
Sbjct: 513 DSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDV 572

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             +  TYN ++ A+ ++  M  A  + + M + G  PD  TY  +I G  + GN+     
Sbjct: 573 CHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYK 632

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            + E +       L T+  ++  LC   K  +AV ++  M      +K     T N + +
Sbjct: 633 FLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLML-----QKGIVPETVNTIFE 687

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQT---TYQIVREEMMEKGFIPDI 526
               K  +     L+ +LL+KG I   T    Y  +R++ + K  +P +
Sbjct: 688 A--DKKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRDKKILKKRLPTV 734



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 21/407 (5%)

Query: 132 PHLGFEAFKRA-GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD-SF 189
           P    E F  A  + G K +  +   +++ L   G+FE++E +  EM+       L+ ++
Sbjct: 20  PLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAY 79

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
              +    + GK+ +A D  E M      P V ++N +++   +    G   +A  V+  
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVE---FGYHNQAHKVYMR 136

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M + G+  +  T+   I  FCK     AA+++   M   G  +  V Y +++ GL   G+
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            D A  L DEM+A  L P+VV  N L++  CKK LV ++  L   + ++G+ P++ T+N 
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 370 LIDAYCKEGRMEDAFAMRNS-----------MLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            +   C+EG ++   A+RNS           M++ G  PD  TYN +I G  ++G V+  
Sbjct: 257 FVQGLCREGALDR--AVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++ + V  G +    TY  L+   CKDG   +A+++  +      +   P+IV YN L
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL---GKGLRPSIVLYNTL 371

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           IKG  Q+G +  A  L+NE+ E G +PN  TY +V   + + G + D
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 6/255 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           + L+  Y K +K     E   R    G+   V++ N LL  L K GK E+V  ++K M+ 
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +    N+ ++N +++ LCKA K+N+A D++ +MKS G+ P VV++  L  G+CK G I  
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 240 MYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            Y+   +F+ M +   +     T+N ++  F +  N++ AMK+F  M + G      TY 
Sbjct: 559 AYQ---LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYR 615

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +I+G C  G + +      E M     P++ T   ++N  C K  V +A  +   + ++
Sbjct: 616 VVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675

Query: 359 GLSPSVITYNTLIDA 373
           G+ P   T NT+ +A
Sbjct: 676 GIVPE--TVNTIFEA 688



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 54/259 (20%)

Query: 278 AMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           A+++F    S  G      TY  ++  L   G+ +E   L  EM     + NV  +NAL+
Sbjct: 23  ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-----RENV--NNALL 75

Query: 337 NG--------FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            G        + +K  V++A   F+ +      PSV ++N +++   + G    A  +  
Sbjct: 76  EGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM 135

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M DRGV  DV                                    TY I + + CK  
Sbjct: 136 RMRDRGVQSDV-----------------------------------YTYTIRIKSFCKTA 160

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +   A+ LL  M ++  +    N V Y  ++ G    G+ + A  L +E+L + L P+  
Sbjct: 161 RPYAALRLLRNMPELGCDS---NAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVV 217

Query: 509 TYQIVREEMMEKGFIPDIE 527
            +  +   + +KG + + E
Sbjct: 218 AFNKLVHVLCKKGLVFESE 236


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 219/406 (53%), Gaps = 12/406 (2%)

Query: 110 DSLCRNSIIIDMLML-----AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D + RN +  ++ M      AYV+  +  +  E  K     G+   +   N L+  L + 
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            K E+ + +  +M  + I+ N  ++   +N   K+G++  A    +DM S G+ P  V Y
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            ILI G+C    +G   +A + FK M+E G++P+   ++ +I    K+     AM VF +
Sbjct: 595 TILIKGHCD---VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
               G+   V  YNSLI+G C +G +++A  L DEM+ +G+ PN+V  N LING CK   
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE 711

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V KAR LFD+I E+ L P V+TY+T+ID YCK G + +AF + + M+ +G+ PD   Y  
Sbjct: 712 VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 771

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI G  +EGN+E   ++ +E     +   L  +N L+ + CK GK  +A  L D+M    
Sbjct: 772 LIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMV--- 827

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +K  PNIVTY +LI  + +   +E+A  L  ++  + +IPN  TY
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 873



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 215/381 (56%), Gaps = 12/381 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K +V     L++A V+E ++E    + K M    +  +L  +N ++ GLC+A K+ +A
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ DM   G+ P   TY   I+ Y K G I     A+  FKDM+ +GI+PN V +  L
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV---AERYFKDMLSSGIVPNNVIYTIL 597

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C   N   A+  F+ M   G+   +  Y+++I+ L  +GK  EA+ +  + + +G+
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V   N+LI+GFCK+  +EKA  L+D++   G++P+++ YNTLI+  CK G +  A  
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + + ++ ++PDV TY+ +I G  + GN+     + +E+++ G+      Y IL+    
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 777

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G  +KA+SL  E     ++K   ++  +N LI  FC+ GK+ +A  L +++++K L P
Sbjct: 778 KEGNLEKALSLFHE----AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833

Query: 506 NQTTYQIV-----REEMMEKG 521
           N  TY I+     + EMME+ 
Sbjct: 834 NIVTYTILIDAYGKAEMMEEA 854



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 212/443 (47%), Gaps = 53/443 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+     GL  +  +   L+   +KEG  E+   +  EM  R ++LN+ ++N ++ G+ K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK------------------- 239
           AG++ KA  +  +M   G+ P   TYN+LIDGY K   + K                   
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453

Query: 240 -------------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                        + KA+ V   M+ NG+ PN   + TLI  + ++     A+++ + M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           ++G+   +  YN LI GLC   K++EA  L  +M   G+KPN  T  A IN + K   ++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A   F D+   G+ P+ + Y  LI  +C  G   +A +    ML++G++PD+  Y+ +I
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             LS+ G  +    +  + +  G+   +  YN L+   CK+G  +KA  L DEM      
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML---HN 690

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------- 513
              PNIV YN LI G C+ G++  A  L +E+ EK L+P+  TY  +             
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750

Query: 514 ---REEMMEKGFIPDIEGHMYNI 533
               +EM+ KG  PD  G++Y I
Sbjct: 751 FKLFDEMISKGISPD--GYIYCI 771



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 253/533 (47%), Gaps = 46/533 (8%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNT---------VILQLFNSDADPVLILRYFC 51
           PF   + T+ + + +++   W  L N + N           +LQ    D D V +  +F 
Sbjct: 50  PFDHYDDTVREFSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEID-DSVRLQNFFY 108

Query: 52  WSTKELRASHSL----LLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST 107
           WS+ ++     L    +L  RL +S ++ +      + L   ++  K      I  +L  
Sbjct: 109 WSSSKMSTPQYLHSYSILAIRLCNSGLIHQA----DNMLEKLLQTRK--PPLEILDSLVR 162

Query: 108 C-----SDSLCRNSIIIDMLMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQL 157
           C       +L    I ID   +         LGF       F  +   G   +++ CN L
Sbjct: 163 CYREFGGSNLTVFDIFIDKFRV---------LGFLNEASSVFIASISEGFFPTLICCNNL 213

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +R L+K         VY  M   +I  ++ ++  V+   CK G + K   ++ +M+    
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-EC 272

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P + TYN  I G C+ G + +   A  V K M+E G+ P+  T+  L+DGFCK +    
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDE---ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  +FE M S G+     TY +LI+G   +G ++EA+ ++DEM+  GLK NVVT NA+I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  K   + KA  LF+++   GL P   TYN LID Y K   M  A  +   M  R + P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
              TY+ LI+GL    +++    ++++++ NG++  +  Y  L+ A  ++ + + A+ LL
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             M         P++  YN LI G C+  K+E+A  LL ++ EKG+ PN  TY
Sbjct: 510 KIMI---ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 241/458 (52%), Gaps = 38/458 (8%)

Query: 84   SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
            +F++++ K+G+       F  +   S  +  N++I  +L+  +            FK   
Sbjct: 561  AFINLYSKSGEIQVAERYFKDM--LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 144  DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            + GL   + + + ++ +L K GK ++   V+ +  +  +  ++  +N +++G CK G + 
Sbjct: 619  EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 204  KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            KAS + ++M   G++P +V YN LI+G CK   +G++ KA  +F ++ E  ++P+ VT++
Sbjct: 679  KASQLYDEMLHNGINPNIVVYNTLINGLCK---LGEVTKARELFDEIEEKDLVPDVVTYS 735

Query: 264  TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            T+IDG+CK  N++ A K+F+EM S GI+     Y  LI+G   +G L++A++L  E    
Sbjct: 736  TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795

Query: 324  GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             +  ++   N+LI+ FCK   V +AR LFDD+ ++ L+P+++TY  LIDAY K   ME+A
Sbjct: 796  SVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 854

Query: 384  FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
              +   M  R ++P+  TY  L+   ++ GN   + ++  ++   G+    + Y ++  A
Sbjct: 855  EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 914

Query: 444  LCKDGKSKKAVSLLDE----------------MFKMEKEKKWPNIV-------------- 473
             CK+GKS +A+ LL++                +F + KEK+   ++              
Sbjct: 915  YCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS 974

Query: 474  --TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              T N L+ GF + G  ++A+ +L  +   G +P   +
Sbjct: 975  SKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           L E + V    ISE G  P++I  N L+    K   M   + +  SM++  ++PDV TY 
Sbjct: 188 LNEASSVFIASISE-GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYT 246

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I    + G+V   + +++E+     +  L TYN  +G LC+ G   +A+    E+ K+
Sbjct: 247 NVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEAL----EVKKL 301

Query: 464 EKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             EK   P+  TY +L+ GFC++ + ++A  +   +   GL PN+ TY  + +  +++G 
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 523 IPD 525
           I +
Sbjct: 362 IEE 364


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/503 (31%), Positives = 242/503 (48%), Gaps = 39/503 (7%)

Query: 45  LILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           L L++  W  K+  L  +H   +     H LV A+ Y   ++ L   ++      ++++F
Sbjct: 34  LALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLP--IGLNSVF 91

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
            AL         N  + D+L+   ++N       + F   G  GL  SV +CN +L +LV
Sbjct: 92  GALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLV 151

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KE K +     +K M  + I  ++ +FN +LN LC+ GK   A  ++  M+  GV P  V
Sbjct: 152 KEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAV 211

Query: 223 TYNILIDGYCKKG---------------GIG-----------------KMYKADAVFKDM 250
           TYN L++ YCKKG               GIG                 +  K   + K M
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
             N + PNE+T+NTLI GF ++  I  A KVF+EM    +    +TYN+LI G C  G +
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+ L D M++ GL+PN VT  AL+NG  K         + + +   G+  S I+Y  +
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID  CK G +E+A  + + ML   V PDV T++ LI G  R G +   + IM ++   G+
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               + Y+ L+   CK G  K+A   L+    M       +  T NVL+  FC+ GKLE+
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEA---LNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEE 508

Query: 491 ANGLLNELLEKGLIPNQTTYQIV 513
           A   +N +   GL PN  T+  +
Sbjct: 509 AEYFMNHMSRMGLDPNSVTFDCI 531



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 221/482 (45%), Gaps = 46/482 (9%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + +F   L+   + GKF +   +   +      +   ++  + L+  Y K  +     
Sbjct: 173 PDVATFNILLNALCERGKFKNAGFLLRKME--ESGVYPTAVTYNTLLNWYCKKGRYKAAS 230

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +        G+   V + N  +  L ++ +      + K M+R  +  N  ++N +++G 
Sbjct: 231 QLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGF 290

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            + GK+  A+ + ++M    + P  +TYN LI G+C  G IG+  +   V   MV +G+ 
Sbjct: 291 VREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV---MVSHGLR 347

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PNEVT+  L++G  K+        + E M   G+    ++Y ++I+GLC +G L+EAV L
Sbjct: 348 PNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQL 407

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D+M+   + P+VVT + LINGF +   +  A+ +   + + GL P+ I Y+TLI  YCK
Sbjct: 408 LDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK 467

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +++A      M   G + D  T N L+A   R G +E     MN +   G+    VT
Sbjct: 468 MGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVT 527

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF-------------- 482
           ++ ++      G + KA S+ D   KM     +P++ TY  L+KG               
Sbjct: 528 FDCIINGYGNSGDALKAFSVFD---KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584

Query: 483 ---------------------CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                                C+ G L DA  L+NE++    +P+  TY  +   + +KG
Sbjct: 585 RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG 644

Query: 522 FI 523
            I
Sbjct: 645 KI 646



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 182/358 (50%), Gaps = 6/358 (1%)

Query: 156  QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
             L+  L+K G      Y+++EM  + +E +  +FN +++   + GK +K +DI+  MKS 
Sbjct: 671  SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSK 730

Query: 216  GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
             +   + TYNIL+ GY K+  + + +    ++KDM+ +G LP++ ++++LI G+C+ ++ 
Sbjct: 731  NLCFNLATYNILLHGYAKRHAMARCF---MLYKDMIRHGFLPDKFSWHSLILGYCQSKSF 787

Query: 276  SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
              A+K+   +   G      T+N LI   C   ++ +A  L  +M    + PNV T NAL
Sbjct: 788  DVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNAL 847

Query: 336  INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
             NG  +     KA  +   + E G  P+   Y TLI+  C+ G ++ A  +++ M   G+
Sbjct: 848  FNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGI 907

Query: 396  LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
                   + ++ GL+    +E    +++ ++   +   + T+  L+   CK+    KA+ 
Sbjct: 908  SSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE 967

Query: 456  LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            L      ME      ++V YNVLI G C  G +E A  L  E+ ++ L PN + Y ++
Sbjct: 968  LRS---IMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVL 1022



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 209/499 (41%), Gaps = 44/499 (8%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LL  ++     P + +F   ++ F + GK  +   I   +      L  N I+   L+ 
Sbjct: 406 QLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMY--KTGLVPNGILYSTLIY 463

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K         A+      G  +   +CN L+    + GK E+ EY    M R  ++ 
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP 523

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------- 237
           N  +F+ ++NG   +G   KA  + + M S G  P + TY  L+ G C  G I       
Sbjct: 524 NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFF 583

Query: 238 -------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
                                    G +  A A+  +MV N  LP+  T+  LI G CK 
Sbjct: 584 HRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKK 643

Query: 273 ENISAAMKVFEEMGSHGI-AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             I AA+ +  +    G+ +     Y SL++GL   G    A+ + +EM+   ++P+ V 
Sbjct: 644 GKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVA 703

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+ + +K    K   +   +  + L  ++ TYN L+  Y K   M   F +   M+
Sbjct: 704 FNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMI 763

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G LPD  +++ LI G  +  + +    I+  +   G      T+N+L+   C+  + K
Sbjct: 764 RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMK 823

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           KA  L+ +M    +    PN+ TYN L  G  +      A+ +L  LLE G +P    Y 
Sbjct: 824 KAFELVKQM---NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYI 880

Query: 512 IVREEMMEKGFIPDIEGHM 530
            +   M   G   +I+G M
Sbjct: 881 TLINGMCRVG---NIKGAM 896



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 194/443 (43%), Gaps = 71/443 (16%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ S +S   ++  L K G  E+   +  +M +  +  ++ +F+ ++NG  + GK+N A
Sbjct: 380 GVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNA 439

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
            +IM  M   G+ P  + Y+ LI  YCK G +                            
Sbjct: 440 KEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVAT 499

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               GK+ +A+     M   G+ PN VTF+ +I+G+    +   A  VF++M S G    
Sbjct: 500 FCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPS 559

Query: 294 VVTYNSLINGLCVDGKLDEA-----------------------------------VALRD 318
           + TY  L+ GLC+ G ++EA                                   +AL +
Sbjct: 560 LFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALIN 619

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKE 377
           EM+ +   P+  T   LI G CKK  +  A +L     E+G LSP+   Y +L+D   K 
Sbjct: 620 EMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKH 679

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G    A  +   ML++ V PD   +N +I   SR+G    V +I++ + +  +   L TY
Sbjct: 680 GHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATY 739

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NIL+    K     +   L  +M    +    P+  +++ LI G+CQ    + A  +L  
Sbjct: 740 NILLHGYAKRHAMARCFMLYKDMI---RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRW 796

Query: 498 LLEKGLIPNQTTYQIVREEMMEK 520
           +  +G + ++ T+ ++  +  E+
Sbjct: 797 ITLEGHVIDRFTFNMLITKFCER 819



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 40/322 (12%)

Query: 89   FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
            + + GK + V+ I   +   S +LC N    ++L+  Y K       F  +K    +G  
Sbjct: 711  YSRKGKTSKVNDILSTMK--SKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL 768

Query: 149  SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
                S + L+    +   F+    + + +      ++  +FN ++   C+  ++ KA ++
Sbjct: 769  PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFEL 828

Query: 209  MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            ++ M    V P V TYN L +G  +       +KA  V + ++E+G +P    + TLI+G
Sbjct: 829  VKQMNQFMVIPNVDTYNALFNGLIRTS---DFHKAHRVLQVLLESGSVPTNKQYITLING 885

Query: 269  FCKDENISAAMKVFEEMGSHGIAA-----------------------------------G 293
             C+  NI  AMK+ +EM + GI++                                    
Sbjct: 886  MCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPT 945

Query: 294  VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            V T+ +L++  C +  + +A+ LR  M    +K +VV  N LI+G C    +E A  L++
Sbjct: 946  VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYE 1005

Query: 354  DISEQGLSPSVITYNTLIDAYC 375
            ++ ++ L P+   Y  LID++C
Sbjct: 1006 EMKQRDLWPNTSIYIVLIDSFC 1027



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 3/241 (1%)

Query: 120  DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +ML+  + +  +    FE  K+   + +  +V + N L   L++   F     V + +  
Sbjct: 810  NMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLE 869

Query: 180  RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                     +  ++NG+C+ G +  A  + ++MK+LG+S   V  + ++ G        K
Sbjct: 870  SGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSK---K 926

Query: 240  MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            +  A  V   M+E  I+P   TF TL+  +CK+ N++ A+++   M    +   VV YN 
Sbjct: 927  IENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNV 986

Query: 300  LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
            LI+GLC +G ++ A  L +EM    L PN      LI+ FC      ++  L  DI ++ 
Sbjct: 987  LISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRE 1046

Query: 360  L 360
            L
Sbjct: 1047 L 1047


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 223/382 (58%), Gaps = 7/382 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K + +    L++  V+EG+F++   + K M ++ ++ ++  +N V+ GLCK+ K+ +A
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D + +M   G+ P V TY  LI GYCK G   +M  AD  FK+M+  GI PN+V    L
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSG---EMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK+ + + A  +F  M    +   V TY++LI+GL  +GKL  A+ L  E +  GL
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T N++I+GFCK+  + KA  L + + ++G+SP++ITYN LI+  CK G +E A  
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + +  +G+  +  TY  +I G  + GN+     + +E+   G+      Y+ L+    
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G ++KA+SL  E      +K + +  + N L+ GFC+ GK+ +AN LL ++++K + P
Sbjct: 773 KEGNTEKALSLFLESV----QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKP 828

Query: 506 NQTTYQIVREEMMEKGFIPDIE 527
           +  TY I+ +   + GF+ + E
Sbjct: 829 DHVTYTILIDYHCKTGFLKEAE 850



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/420 (32%), Positives = 226/420 (53%), Gaps = 9/420 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           ++G     S +F  +   S  +  N++I   L+  +V+  +        K     G++  
Sbjct: 458 RHGSIEDASRVFEIM--VSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           VL  N ++  L K  K E+ +    EM  R ++ N+ ++  +++G CK+G++  A    +
Sbjct: 516 VLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFK 575

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G++P  V    LIDGYCK+G      +A ++F+ M+   + P+  T++ LI G  
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGST---TEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +  AM++  E    G+   V TYNS+I+G C  G + +A  L + M   G+ PN++
Sbjct: 633 RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNII 692

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T NALING CK   +E+AR LFD I  +GL+ + +TY T+ID YCK G +  AF + + M
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             +GV PD   Y+ LI G  +EGN E   ++  E V  G  A   + N L+   CK GK 
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKV 811

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  LL++M  ++K  K P+ VTY +LI   C+ G L++A     ++ ++ L+PN  TY
Sbjct: 812 IEANQLLEDM--VDKHVK-PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 214/428 (50%), Gaps = 51/428 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++   L+   +++G   +   V +EM  R ++LNL ++N ++ G+CK G + KA
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             ++ +M  +G+ P   TYN +I+GY K+                               
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIING 455

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G +  A  VF+ MV  G+ PN V + TLI G  ++     A+++ + M   G+   
Sbjct: 456 LCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V+ YNS+I GLC   K++EA     EM+  GLKPNV T  ALI+G+CK   ++ A   F 
Sbjct: 516 VLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFK 575

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++   G++P+ +    LID YCKEG   +A ++   ML R V PDV TY+ LI GL R G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNG 635

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++G   +++E +  G+   + TYN ++   CK G   KA  L + M    ++   PNI+
Sbjct: 636 KLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC---QKGISPNII 692

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEM 517
           TYN LI G C+ G++E A  L + +  KGL  N  TY  +                 +EM
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 518 MEKGFIPD 525
             KG  PD
Sbjct: 753 TLKGVPPD 760



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 265/564 (46%), Gaps = 68/564 (12%)

Query: 2   FCSA----NSTIEDITELIRNHHWSKL-----KNTDPNTVILQLFNSDADPVLILRYFCW 52
           FCS     ++ + +IT  +   +W  L         P+ V   +     DP  +L +F W
Sbjct: 31  FCSKTQNNSNIVNEITTFLNQKNWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNW 90

Query: 53  STKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV--KNGKFTSVSTIFHALSTCSD 110
              ++  S  L     L   L  ++ + +  S ++  +   +G ++ +  +   + +C +
Sbjct: 91  VQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEI--LDSLIKSCKE 148

Query: 111 ------------SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
                       +     ++ ++L+  Y K          F  A   G    +L CN LL
Sbjct: 149 FDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLL 208

Query: 159 RALVKEGKFE----------------DVEYVY-------------KEMKRRRIEL----- 184
             L+K  K E                DV Y Y             KE KR   E+     
Sbjct: 209 SDLLKANKLELFWRFYNGMLEANVLHDV-YTYTHLINAHFRAGNAKEGKRLLFEMEEKGC 267

Query: 185 --NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             +L ++N V+ GLC+AG++++A ++ + M   G+   V TY+ILIDG+ K+    +  +
Sbjct: 268 SPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQK---RCTE 324

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  + ++M   G+ P  V +  LIDGF +  +   A +V EEM + G+   + TYN+L+ 
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVK 384

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G+C  G +++A AL +EM+  G+KP+  T N +I G+ K++   + + L  ++ +  L P
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +  T   +I+  C+ G +EDA  +   M+  GV P+   Y  LI G  +EG  +    I+
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRIL 504

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +   G++  ++ YN ++  LCK  K ++A   L EM  +E+  K PN+ TY  LI G+
Sbjct: 505 KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM--IERGLK-PNVYTYGALIHGY 561

Query: 483 CQKGKLEDANGLLNELLEKGLIPN 506
           C+ G+++ A+    E+L  G+ PN
Sbjct: 562 CKSGEMQVADRYFKEMLGCGIAPN 585



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 232/518 (44%), Gaps = 102/518 (19%)

Query: 90   VKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDM------------------------- 121
            V+ G+F     I   +       D LC NS+II +                         
Sbjct: 492  VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 122  -----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
                 L+  Y K+ +  +    FK     G+  + + C  L+    KEG   +   +++ 
Sbjct: 552  YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 177  MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
            M  R +  ++ +++ +++GL + GKL  A +++ +    G+ P V TYN +I G+CK+GG
Sbjct: 612  MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 237  IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            IGK ++   + + M + GI PN +T+N LI+G CK   I  A ++F+ +   G+A   VT
Sbjct: 672  IGKAFQ---LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728

Query: 297  YNSLINGLCVDGKLDEAVALRDEMMASGLKPN---------------------------- 328
            Y ++I+G C  G L +A  L DEM   G+ P+                            
Sbjct: 729  YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788

Query: 329  ------VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
                    + NAL++GFCK   V +A  L +D+ ++ + P  +TY  LID +CK G +++
Sbjct: 789  QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKE 848

Query: 383  AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
            A      M  R ++P+  TY  L++G +  G    +  + +E++   +    VT+++++ 
Sbjct: 849  AEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908

Query: 443  ALCKDGKSKKAVSLLDEMFK--------------------------------MEKEKKWP 470
            A  K+G   K + L+D+M K                                +E++    
Sbjct: 909  AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL 968

Query: 471  NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
            ++ T + L++ F + GK++ A  +L  ++    +P+ T
Sbjct: 969  SLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST 1006



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 50/429 (11%)

Query: 89   FVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
            + K G  T  ++IF  +   S   D    +++I  +L     +N K     E      + 
Sbjct: 596  YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL-----RNGKLQGAMELLSEFLEK 650

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GL   V + N ++    K+G       +++ M ++ I  N+ ++N ++NGLCKAG++ +A
Sbjct: 651  GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF--- 262
             ++ + +   G++   VTY  +IDGYCK G + K ++   +F +M   G+ P+   +   
Sbjct: 711  RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR---LFDEMTLKGVPPDSFVYSAL 767

Query: 263  -------------------------------NTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                                           N L+DGFCK   +  A ++ E+M    + 
Sbjct: 768  IDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 292  AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               VTY  LI+  C  G L EA     +M    L PN +T  AL++G+       +   L
Sbjct: 828  PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887

Query: 352  FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            FD++  + + P  +T++ +IDA+ KEG       + + ML +G     +  + LI  L R
Sbjct: 888  FDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCR 947

Query: 412  EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-P 470
            + +V  V  ++ ++   G+   L T + LV    K GK   A  +L  M +     KW P
Sbjct: 948  KEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRF----KWVP 1003

Query: 471  NIVTYNVLI 479
            +    N LI
Sbjct: 1004 DSTELNDLI 1012



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 6/304 (1%)

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           V + +LIDGY KKG   +   A + F     NG +   +  N L+    K   +    + 
Sbjct: 167 VVFELLIDGYKKKGLFDE---AVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRF 223

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           +  M    +   V TY  LIN     G   E   L  EM   G  P++VT N +I G C+
Sbjct: 224 YNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCR 283

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++A  L   + ++GL   V TY+ LID + K+ R  +A  M   M  +G+ P    
Sbjct: 284 AGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVA 343

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI G  R+G+      +  E++  G++  L TYN LV  +CK G  +KA +LL+EM 
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +  +   P+  TYN +I+G+ ++        LL+E+ +  L+P   T  ++   +   G
Sbjct: 404 MVGIK---PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHG 460

Query: 522 FIPD 525
            I D
Sbjct: 461 SIED 464


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 232/464 (50%), Gaps = 62/464 (13%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV---EYVY 174
           ++D  + AYV+  +PHL  + F +      + ++L+CN L+ +LV+      +     V 
Sbjct: 142 LLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVL 201

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGK--------------------------------- 201
           K+  +  +  N +SFN ++ G C   K                                 
Sbjct: 202 KDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKR 261

Query: 202 --LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
             L +A D++ DMKS G+SP   TYN+L+ GYC+   +G + +A  V + M  N +LP  
Sbjct: 262 RLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCR---LGLLKEATKVIEIMTRNNLLPTV 318

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            T+N L++GFC D  I  A ++ +EM    +   VVTYN+LI+G        E  +L +E
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G+K N VT N ++   CKK  + +A    D + E GLSP  +TYNTLI AYCK G+
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M  AF M + M  +G+  D  T N ++  L  E  ++   N++      G     V+Y I
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           L+    KD K  +A++L DEM    KE++  P+ +TYN +I G CQ  K++ A   LNE+
Sbjct: 499 LILGYFKDEKGDRALNLWDEM----KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM 554

Query: 499 LEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           LE GL+P++TTY I+                  EM+E  F PD+
Sbjct: 555 LENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDV 598



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 213/381 (55%), Gaps = 6/381 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L  +V + N L+     +GK ++   +  EM++  +  ++ ++N +++G  +    ++  
Sbjct: 314 LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVY 373

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++E+M   GV    VTYNI++   CKKG    M +A      M ENG+ P+ VT+NTLI
Sbjct: 374 SLIEEMDKKGVKCNAVTYNIILKWMCKKGN---MTEATTTLDKMEENGLSPDCVTYNTLI 430

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             +CK   +  A ++ +EM S G+     T N++++ LCV+ KLDEA  L       G  
Sbjct: 431 GAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYI 490

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + V+   LI G+ K +  ++A  L+D++ E+ + PS ITYN++I   C+  +++ A   
Sbjct: 491 LDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N ML+ G++PD +TYN +I G   EGNVE      NE++ N  +  + T NIL+  LC+
Sbjct: 551 LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G  +KA+ L + +    K+    ++VTYN +I   C++GK E+A  LL E+  K L P+
Sbjct: 611 EGMLEKALKLFNTLVSKGKD---IDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
           Q TY+++   + + G I + E
Sbjct: 668 QYTYKVIIAALTDAGRIKEAE 688



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 196/378 (51%), Gaps = 24/378 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL    ++ N L+ A  K GK      +  EM  + ++++  + N +L+ LC   KL++A
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEA 477

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCK--KGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            +++      G     V+Y ILI GY K  KG      +A  ++ +M E  I+P+ +T+N
Sbjct: 478 YNLLCSASKRGYILDEVSYGILILGYFKDEKGD-----RALNLWDEMKERQIMPSTITYN 532

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           ++I G C+   +  A+    EM  +G+     TYN +I+G C++G +++A    +EM+ +
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KP+V T N L+ G C++ ++EKA  LF+ +  +G    V+TYNT+I + CKEG+ E+A
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           + +   M  + + PD  TY  +IA L+  G ++       ++V +G         I+   
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG---------IVHDQ 703

Query: 444 LCKDGKSKKAV-SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             K GK +  + S + E F  +        + Y+  I   C + K +DA  L  E+ ++G
Sbjct: 704 NLKLGKGQNVLTSEVSEHFDFKS-------IAYSDQINELCNQHKYKDAMHLFVEVTKEG 756

Query: 503 LIPNQTTYQIVREEMMEK 520
           +  N+ TY  + E ++++
Sbjct: 757 VALNKYTYLNLMEGLIKR 774



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 15/289 (5%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+L Y K+ K       +    +  +  S ++ N ++  L +  K +       EM   
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            +  +  ++N +++G C  G + KA     +M      P V T NIL+ G C++G + K 
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            K   +F  +V  G   + VT+NT+I   CK+     A  +  EM +  +     TY  +
Sbjct: 618 LK---LFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVI 674

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I  L   G++ EA     +M+ SG    +V    L       KL +   VL  ++SE   
Sbjct: 675 IAALTDAGRIKEAEEFTLKMVESG----IVHDQNL-------KLGKGQNVLTSEVSEH-F 722

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
               I Y+  I+  C + + +DA  +   +   GV  +  TY  L+ GL
Sbjct: 723 DFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 130/367 (35%), Positives = 204/367 (55%), Gaps = 6/367 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +Y +K      N LL  LV   K + VE  +  M RRRI  ++ +FN ++  LCKA ++ 
Sbjct: 161 EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVR 220

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +ME+M S G+SP   T+  ++ GY + G +    +   + + MVE G    +VT N
Sbjct: 221 PAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR---IKEQMVEYGCPCTDVTVN 277

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+GFCK   I  A+   +E  S G      TYN+L+NGLC  G    A+ + D M+  
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 337

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P++ T N+LI+G CK   +E+A  + D +  +  SP+ +TYN +I + CKE R+++A
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +  +G+LPDV T+N LI GL    N +   ++  E+   G R    TYN+L+ +
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC   K ++A++LL E   ME      N+V YN LI GFC+  ++E+A  + +E+  +G+
Sbjct: 458 LCSSRKLEEALNLLKE---MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514

Query: 504 IPNQTTY 510
             +  TY
Sbjct: 515 SRDSVTY 521



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 224/426 (52%), Gaps = 23/426 (5%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           + +++L+  + K  +        + A   G +    + N L+  L K G  +    V   
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    ++ ++ ++N +++GLCK G++ +A  I++ M S   SP  VTYN +I   CK+  
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + +   A  + + +   GILP+  TFN+LI G C   N  +AM +FEEM   G      T
Sbjct: 394 VDE---ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI+ LC   KL+EA+ L  EM  +G   NVV  N LI+GFCK K +E+A  +FD++ 
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            QG+S   +TYNTLID  CK  R+EDA  + + M+  G+ PD  TYN L+    + G+++
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIK 570

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              +I+  + ++G    +VTY  L+  LCK G+ + A  LL  + +M+     P+   YN
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSI-QMKGMVLTPH--AYN 627

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-----------------EMME 519
            +I+   ++ +  +A  L  E+L+K   P+  TY+IV                   EM+E
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIE 687

Query: 520 KGFIPD 525
           +G IP+
Sbjct: 688 RGNIPE 693



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 9/356 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V + N L++ L      +    +++EMK +    +  ++N +++ LC + KL +A
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++++M+  G +  VV YN LIDG+CK     ++ +A+ +F +M   G+  + VT+NTL
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKN---KRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK + +  A ++ ++M   G+     TYNSL+   C  G + +A  +   M +SG 
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++VT   LI+G CK   V+ A  L   I  +G+  +   YN +I A  K  R  +A  
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG-VRNIMNELVNNGMRAGLVTYNILVGAL 444
           +   MLD+   PD  TY  +  GL   G   G   +   E++  G      ++ +L   L
Sbjct: 645 LFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           C        V L+D +  MEK K     ++    I+GF +  K +DA   L  +L+
Sbjct: 705 CTLSMDDTLVKLVDMI--MEKAKFSEREIS---TIRGFLKIRKFQDALSTLGGILD 755



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 8/281 (2%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN +I + L+  + KN +     E F      G+    ++ N L+  L K  + ED   +
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    +  +  ++N +L   CK G + KA+DI++ M S G +P +VTY  LI G CK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G++  A  + + +   G++     +N +I    K      AM++F EM        
Sbjct: 601 A---GRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPD 657

Query: 294 VVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            +TY  +  GLC   G + EAV    EM+  G  P   +   L  G C   + +    L 
Sbjct: 658 AITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLV 717

Query: 353 DDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           D I E+   S   I   + I  + K  + +DA +    +LD
Sbjct: 718 DMIMEKAKFSEREI---STIRGFLKIRKFQDALSTLGGILD 755


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 236/461 (51%), Gaps = 56/461 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+    KN +P    E F+         S+++ N LL  L + GK E    ++
Sbjct: 9   NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68

Query: 175 KEMKRRR-------------------IELNLD--------------SFNFVLNGLCKAGK 201
           +EM  RR                   IE  L+              +++ +++GLCKA +
Sbjct: 69  QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANR 128

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A +++E MK+ G SP V+TY IL+DG CK+  +   ++   V ++M++ G +PN VT
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE---VLREMLDAGCVPNLVT 185

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N+L+ G C+   +S A+ +  +M   G    VVTY +LI+GLC  G++ +A A+  +M+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  P+++  N LING CK   V+++  L       G+ P V+TY+++I   C+  R++
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   +  RG  PDV  Y+ LI GL + G V+   ++   +  +G  A +VTY+ L+
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK G+  +A  LL  M +M      P+ +TYN LIKG C    L++A  L+ E+   
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTP---PSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 422

Query: 502 GLIPNQTTYQIV-----------------REEMMEKGFIPD 525
              P+  TY I+                  +EM++ G IPD
Sbjct: 423 NCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 237/467 (50%), Gaps = 44/467 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S +    KN +      +F  + +  CS S+   + ++D L     +  K       F+ 
Sbjct: 15  SLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF----RTGKLERAMALFQE 70

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             D      V+S N L+  L + GK E     +++M  R    N+ +++ +++GLCKA +
Sbjct: 71  MLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANR 128

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------------- 242
           +++A +++E MK+ G SP V+TY IL+DG CK+  +   ++                   
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 188

Query: 243 -------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
                        A A+ +DM   G  PN VT+ TLIDG CK   +  A  +  +M   G
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               ++ YN LINGLC   ++DE++AL    ++ G+KP+VVT +++I G C+   +++A 
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   +  +G  P VI Y+TLID  CK G++++AF +   M   G   DV TY+ LI GL
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G V+    ++  +V  G     +TYN L+  LC      +A+ L++E   ME+    
Sbjct: 369 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE---MERSNCA 425

Query: 470 PNIVTYNVLIKGFCQKGKLEDAN-GLLNELLEKGLIPNQTTYQIVRE 515
           P+ VTYN+LI G C+  +++ A      E+++ G+IP+  TY I+ E
Sbjct: 426 PSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 221/387 (57%), Gaps = 10/387 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D+G + +V++ N L+  L K  + +  + +++ MK      ++ ++N +L+GL + GKL 
Sbjct: 3   DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M     S  V+++NIL+ G C+ G   K+  A   F+ M ++   PN +T++
Sbjct: 63  RAMALFQEMLDRR-SHDVISFNILVTGLCRAG---KIETALEFFRKM-DDRCSPNVITYS 117

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDG CK   +S A+++ E M + G +  V+TY  L++GLC + K+  A  +  EM+ +
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+VT N+L++G C+ + V  A  L  D++ +G +P+V+TY TLID  CK GR++DA
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            AM   M+D+G  PD+  YN LI GL +   V+    ++   V+ G++  +VTY+ ++  
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC+  +  +A  LL     ++     P+++ Y+ LI G C+ GK+++A  L   +   G 
Sbjct: 298 LCRSNRLDEACRLL---LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHM 530
             +  TY  + + + + G +   E H+
Sbjct: 355 DADVVTYSTLIDGLCKAGRVD--EAHL 379



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 5/264 (1%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M ++G  PN VT+N+LIDG CK+     A ++FE M S   +  +VTYN+L++GL   GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+ A+AL  EM+      +V++ N L+ G C+   +E A   F  + ++  SP+VITY+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LID  CK  R+  A  +  SM  RG  PDV TY  L+ GL +E  V     ++ E+++ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               LVTYN L+  LC+  +   A++L   M  M      PN+VTY  LI G C+ G+++
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALAL---MRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
           DA  +L ++++KG  P+   Y ++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNML 259



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 197/413 (47%), Gaps = 45/413 (10%)

Query: 89  FVKNGKFTSVSTIFHALS-TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
             + GK  +    F  +   CS ++   S++ID L     K  +     E  +     G 
Sbjct: 89  LCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGL----CKANRVSQAVELLESMKARGC 144

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
              V++   L+  L KE K      V +EM       NL ++N +L+GLC+A +++ A  
Sbjct: 145 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 204

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +M DM   G +P VVTY  LIDG CK   +G++  A A+  DM++ G  P+ + +N LI+
Sbjct: 205 LMRDMTCRGCTPNVVTYGTLIDGLCK---VGRVKDACAMLADMIDKGGTPDLMIYNMLIN 261

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK + +  ++ +     S GI   VVTY+S+I GLC   +LDEA  L   + + G  P
Sbjct: 262 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 321

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +V+  + LI+G CK   V++A  L++ ++  G    V+TY+TLID  CK GR+++A  + 
Sbjct: 322 DVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 381

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVE------------------------------- 416
             M+  G  P   TYN LI GL    +++                               
Sbjct: 382 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 441

Query: 417 -----GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL-LDEMFKM 463
                   +   E+++NG+    +TY+IL+  L K     +   L LD+M ++
Sbjct: 442 ERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 494



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 179/361 (49%), Gaps = 44/361 (12%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS  +   +I++D L     K  K    +E  +   D G   ++++ N LL  L +  + 
Sbjct: 144 CSPDVITYTILVDGL----CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRV 199

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            D   + ++M  R    N+ ++  +++GLCK G++  A  ++ DM   G +P ++ YN+L
Sbjct: 200 SDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 259

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN------------------------ 263
           I+G CK   + +   + A+ +  V  GI P+ VT++                        
Sbjct: 260 INGLCKADQVDE---SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316

Query: 264 -----------TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
                      TLIDG CK   +  A  ++E M   G  A VVTY++LI+GLC  G++DE
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M+  G  P+ +T N+LI G C    +++A  L +++     +PS +TYN LI 
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436

Query: 373 AYCKEGRMEDA-FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN-IMNELVNNGM 430
             C+  R++ A       M+D GV+PD  TY+ L+ GL +  ++  +R+ +++++V  G 
Sbjct: 437 GMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496

Query: 431 R 431
           R
Sbjct: 497 R 497


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 240/495 (48%), Gaps = 41/495 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +++F W T +    HS      LL + V  KK  +         KN          H   
Sbjct: 116 VKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLF----KN----------HRCG 161

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            CS     +SI    L+  + K       +         G+       N +++ L   G+
Sbjct: 162 LCSP----DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGR 217

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            +     Y++M+R     ++ ++  +++ LCK+ +++ AS I+EDM   G +P VVTYN 
Sbjct: 218 VDSALVHYRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNT 276

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI+G+CK   +G M +A  +F  M+EN   P+  T+N LIDG+CK E      K+ +EM 
Sbjct: 277 LINGFCK---LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
            +G     +TYN+L++ L   GK  +A  L   M+    KP+  T N +I+ FCK   ++
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  LF  ++++G  P + TYN +I   C+  R++DA  +   M + G  PDV TYN ++
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +   V+    +   L N G    +VT + L+  LCK  +   A  LL EM   E+ 
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM---ERN 510

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE---------- 516
              P++V Y +LI GFC+  +L+ +    +E+L+KG +P   TY IV ++          
Sbjct: 511 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 570

Query: 517 ------MMEKGFIPD 525
                 M+E+G  PD
Sbjct: 571 CMLLKTMLERGVTPD 585



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 242/463 (52%), Gaps = 20/463 (4%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLM 123
           +L  ++ A   P + ++   ++ F K G       +F+ +  ++CS  +   +I+ID   
Sbjct: 258 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID--- 314

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             Y K  +P  G +  +    YG + + ++ N L+ +LVK GK+ D   + + M RR  +
Sbjct: 315 -GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  +FN +++  CK G+L+ A ++ + M   G  P + TYNI+I G C+   I     A
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD---A 430

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + + M E G  P+ VT+N+++ G CK   +  A +V+E + + G    VVT ++LI+G
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC   +LD+A  L  EM  +G  P+VV    LI+GFCK   ++K+   F ++ ++G  P+
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           VITY+ +ID  CK  R+ D   +  +ML+RGV PD   Y  +I GL +  + +    +  
Sbjct: 551 VITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYK 610

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +   G    +VTYN+LV  LCK  +  +A+ LL+    ME +   P+ VTYN +  GF 
Sbjct: 611 LMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE---VMESDGCLPDTVTYNSVFDGFW 667

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTY-----QIVREEMMEKG 521
           +  + + A  L   +  +G  P    Y     ++V EE M++ 
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQA 710



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 189/381 (49%), Gaps = 9/381 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +   VK+GK+     +   +    C  S    +++IDM    + K  +  L +E F+ 
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM----FCKVGQLDLAYELFQL 401

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             D G    + + N ++    +  + +D   + + M       ++ ++N +++GLCKA +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A ++ E +++ G    VVT + LIDG CK     ++  A+ + ++M  NG  P+ V 
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR---RLDDAEKLLREMERNGSAPDVVA 518

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  LI GFCK + +  ++  F EM   G    V+TY+ +I+ LC   ++ +   L   M+
Sbjct: 519 YTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTML 578

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+ P+ +   ++I+G CK    ++A  L+  + + G +P+V+TYN L+D  CK  R++
Sbjct: 579 ERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLD 638

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   M   G LPD  TYN +  G  +    +    +   + + G       Y++L+
Sbjct: 639 EAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698

Query: 442 GALCKDGKSKKAVSLLDEMFK 462
             L  + K  +A+ + +E  +
Sbjct: 699 TKLVAEEKMDQAMEIWEEALE 719



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 168/345 (48%), Gaps = 7/345 (2%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA-YVKNMKPHLGFEAFKRAGD 144
           + MF K G+      +F  ++   D  C   I    +M++   +  +     +  +R  +
Sbjct: 383 IDMFCKVGQLDLAYELFQLMT---DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE 439

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G    V++ N ++  L K  + ++   VY+ ++     L++ + + +++GLCK+ +L+ 
Sbjct: 440 AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDD 499

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++ +M+  G +P VV Y ILI G+CK     ++ K+ A F +M++ G +P  +T++ 
Sbjct: 500 AEKLLREMERNGSAPDVVAYTILIHGFCKAD---QLDKSLAFFSEMLDKGCVPTVITYSI 556

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CK   +     + + M   G+    + Y S+I+GLC     DEA  L   M  +G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P VVT N L++  CK   +++A  L + +   G  P  +TYN++ D + K    + AF
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            +  +M  RG  P    Y+ L+  L  E  ++    I  E +  G
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 5/250 (2%)

Query: 273 ENISAAMKVFEE-MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +++  A+K F+   G  G      T N L++      K  EA  L          P+ +T
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT 169

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LINGFCK +  ++A  L D++ ++G+ P    YNT+I   C  GR++ A      M 
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM- 228

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R   P V TY  L+  L +   +     I+ +++  G    +VTYN L+   CK G   
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +AV L ++M    +    P++ TYN+LI G+C++ + +D   LL E+++ G  PN  TY 
Sbjct: 289 EAVVLFNQML---ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345

Query: 512 IVREEMMEKG 521
            + + +++ G
Sbjct: 346 TLMDSLVKSG 355


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 204/367 (55%), Gaps = 13/367 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+R L  E +  + E +++ M+   +  NL ++N +++G CK   + KA ++ ++M   G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVT+ ILIDG CK     +M  A     DM   G++PN   +N LIDG+CK  N+S
Sbjct: 294 LLPNVVTFGILIDGLCKTD---EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+ +  E+  H I   V TY+ LI GLC   +++EA  L  EM   G  PN VT N LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+CK+  +EKA  +   ++E+G+ P++IT++TLID YCK G+ME A  +   M+ +G+L
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV  Y  LI G  ++GN +    +  E+   G+   + T + L+  LCKDG+   A+ L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 457 L----------DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                       +  ++++    PN V Y  LI+G C  G++  A+   +++   GL P+
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590

Query: 507 QTTYQIV 513
             T  ++
Sbjct: 591 VFTCIVI 597



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 206/386 (53%), Gaps = 25/386 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  + G  E+  +VY +M    +   + + N VL+GL K G+ +    +  DM + G
Sbjct: 132 LIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG 188

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            SP VVTY  LIDG C++G   K ++   +F +M+E  I P  V +  LI G C +  IS
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFR---LFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F  M + G+   + TYN++++G C    + +A+ L  EM+  GL PNVVT   LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   +  AR    D++  G+ P++  YN LID YCK G + +A ++ + +    +L
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV TY+ LI GL     +E    ++ E+   G     VTYN L+   CK+G  +KA+ +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             +M +   E   PNI+T++ LI G+C+ GK+E A GL  E++ KGL+P+   Y      
Sbjct: 426 CSQMTEKGIE---PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482

Query: 513 ------------VREEMMEKGFIPDI 526
                       + +EM E G  P++
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNV 508



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 250/470 (53%), Gaps = 24/470 (5%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVK---NGKFTSVS-TIFHALSTCSDSLCRNSIIID 120
           L   ++H L  AK Y K R  +   ++   N + + +  ++F+ LS    S    ++   
Sbjct: 72  LYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVF-G 130

Query: 121 MLMLAYVKNMKPHLGF--EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +L++A+       +G   EA        +  ++ +CN +L  LVK+G+F+ +  VY +M 
Sbjct: 131 VLIIAF-----SEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R    N+ ++  +++G C+ G   KA  + ++M    + P VV Y ILI G C   G  
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC---GES 242

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A+++F+ M  +G+LPN  T+NT++DG+CK  ++  A+++++EM   G+   VVT+ 
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFG 302

Query: 299 SLINGLCVDGKLDEAVALRD---EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            LI+GLC   K DE V+ R    +M + G+ PN+   N LI+G+CK   + +A  L  +I
Sbjct: 303 ILIDGLC---KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +  + P V TY+ LI   C   RME+A  +   M  +G LP+  TYN LI G  +EGN+
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    + +++   G+   ++T++ L+   CK GK + A+ L  EM     +   P++V Y
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV---IKGLLPDVVAY 476

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             LI G  + G  ++A  L  E+ E GL PN  T   + + + + G I D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 209/398 (52%), Gaps = 19/398 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   + G+  ++ + N ++    K    +    +Y+EM    +  N+ +F  +++GLCK
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             ++  A   + DM S GV P +  YN LIDGYCK G +    +A ++  ++ ++ ILP+
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS---EALSLHSEIEKHEILPD 367

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T++ LI G C  + +  A  + +EM   G     VTYN+LI+G C +G +++A+ +  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M   G++PN++T + LI+G+CK   +E A  L+ ++  +GL P V+ Y  LID + K+G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM-------------NEL 425
             ++AF +   M + G+ P+V T +CLI GL ++G +     +              NEL
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
             +      V Y  L+  LC DG+  KA     +   M      P++ T  V+I+G  + 
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD---MRCSGLRPDVFTCIVIIQGHFRA 604

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             L D   L  ++L+ G+IPN + Y+++ +   E G++
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYL 642



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 166/331 (50%), Gaps = 16/331 (4%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
             +G+  ++   N L+    K G   +   ++ E+++  I  ++ +++ ++ GLC   ++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  ++++MK  G  P  VTYN LIDGYCK+   G M KA  V   M E GI PN +TF
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE---GNMEKAIEVCSQMTEKGIEPNIITF 441

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           +TLIDG+CK   + AAM ++ EM   G+   VV Y +LI+G   DG   EA  L  EM  
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLF-------------DDISEQGLSPSVITYNT 369
           +GL PNV T + LI+G CK   +  A  LF             +++     SP+ + Y  
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C +GR+  A    + M   G+ PDV T   +I G  R  ++  V  +  +++  G
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +      Y +L     + G  K A+   +++
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 16/293 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V + + L++ L    + E+ + + +EMK++    N  ++N +++G CK G + KA ++  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G+ P ++T++ LIDGYCK G   KM  A  ++ +MV  G+LP+ V +  LIDG  
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAG---KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL-------------R 317
           KD N   A ++ +EM   G+   V T + LI+GLC DG++ +A+ L              
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           +E+  S   PN V   ALI G C    + KA   F D+   GL P V T   +I  + + 
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
             + D   ++  +L  G++P+ S Y  L  G    G ++       +L   G+
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 20/264 (7%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+  Y K        E   +  + G++ ++++ + L+    K GK E    +Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +  ++ ++  +++G  K G   +A  + ++M+  G+ P V T + LIDG CK 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 235 GGIGKMYKADAVFKDMVENGI---------------LPNEVTFNTLIDGFCKDENISAAM 279
           G I     +DA+   + + G                 PN V +  LI G C D  I  A 
Sbjct: 522 GRI-----SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKAS 576

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           K F +M   G+   V T   +I G      L + + L+ +++  G+ PN      L  G+
Sbjct: 577 KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGY 636

Query: 340 CKKKLVEKARVLFDDISEQGLSPS 363
            +   ++ A    +D+S  G+  S
Sbjct: 637 EESGYLKSALRCSEDLSGIGIGCS 660



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 66/212 (31%)

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISE-----------------------QGLS 361
           L  N    +A+I+     KL  KAR L  D+ +                          +
Sbjct: 66  LAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFT 125

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V  +  LI A+ + G +E+A  +   M    VLP +   N ++ GL ++G  + +  +
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             ++V  G                                        PN+VTY  LI G
Sbjct: 181 YGDMVARGAS--------------------------------------PNVVTYGTLIDG 202

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            C++G    A  L +E++EK + P    Y I+
Sbjct: 203 CCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 216/394 (54%), Gaps = 15/394 (3%)

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           N +P   +E +    DYG   +V   N L+    K G   +   V+ E+ RR +  ++ S
Sbjct: 204 NQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVS 263

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++G C++  + +   +   M+S  +SP V TY+ LI+G CK+    ++ +A+ +F 
Sbjct: 264 FNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKES---RVEEANGLFD 320

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M E G++PN VTF TLIDG CK   I  A++ FE M   GI   ++TYN+LINGLC DG
Sbjct: 321 EMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDG 380

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            L EA  L +EM+ +G KP+ +T   L++G CK   ++ A  + D + E+G+    + + 
Sbjct: 381 DLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFT 440

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI   C++GR+ DA  M   ML  G  PD  TY  +I    ++G+V+    ++ E+  +
Sbjct: 441 ALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRD 500

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G   G+VTYN L+   CK G+ K A  LL  M  ME     PN +T+N+L+ G C+ G  
Sbjct: 501 GRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVV---PNDITFNILLDGHCKHGSS 557

Query: 489 ED---ANGLLNELLEKGLIPNQTTYQIVREEMME 519
            D    NG      EKGL+ +  +Y  +  E ++
Sbjct: 558 VDFKIFNG------EKGLVSDYASYTALVNESIK 585



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           + ++++ G  PN   FN L+ GFCK  ++  A  VF+E+   G+   VV++N+LI+G C 
Sbjct: 214 YLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCR 273

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              ++E   L+  M +  + P+V T +ALING CK+  VE+A  LFD++ E GL P+ +T
Sbjct: 274 SKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVT 333

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID  CK G+++ A      M DRG+ PD+ TYN LI GL R+G+++  R ++NE++
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI 393

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG +   +T+  L+   CKDG    A+ + D   +M +E    + V +  LI G C+ G
Sbjct: 394 GNGFKPDKITFTTLMDGCCKDGDMDSALEIKD---RMVEEGIELDDVAFTALISGLCRDG 450

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++ DA  +L ++L  G  P+  TY +V +   +KG
Sbjct: 451 RVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG 485



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 4/197 (2%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME-DAFAM 386
           +V+  +ALI  +   + +E A      + +   S  V   + L+    K  +     +  
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEF 213

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +LD G  P+V  +N L+ G  + G+V   R + +E+   G+R  +V++N L+   C+
Sbjct: 214 YLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCR 273

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
               ++   L      ME E+  P++ TY+ LI G C++ ++E+ANGL +E+ E GL+PN
Sbjct: 274 SKNVEEGFVLKS---VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330

Query: 507 QTTYQIVREEMMEKGFI 523
             T+  + +   + G I
Sbjct: 331 GVTFTTLIDGQCKHGKI 347


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 165/522 (31%), Positives = 269/522 (51%), Gaps = 31/522 (5%)

Query: 30  NTVILQL-FNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM 88
           ++V+L+L FN    P+  L +F  ++K+     ++    +L+H L  A+ Y + RS+L+ 
Sbjct: 64  DSVLLKLKFN----PIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNE 119

Query: 89  FVKNGKFTSVS-TIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
            V   K    S  +++ L    +    +  + DM++  Y +          F   G  G 
Sbjct: 120 LVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGC 179

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
             S+ SCN+LL +LV++G+  +   VY  + R  I  ++ + + ++N  CK G +N A D
Sbjct: 180 VPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVD 239

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            +++M  LG    VVTYN LIDG      IG M +A+ V K M E GIL N+VT   LI 
Sbjct: 240 FVKEMDYLGFELNVVTYNSLIDGCV---SIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296

Query: 268 GFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           G+C+   +  A KV  EM  S G+      Y  LI+G C   K+D+AV LRDEM+  GL+
Sbjct: 297 GYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR 356

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N+   NALING+CK   V +A  L   + +  L P   +Y+TL+D +C+EG +  A ++
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISV 416

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N ML  G+  +V T+N L+ GL R G  E   ++ + ++  G+    V+Y  L+  L K
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+  +A++L +++      +   +   +N +I GFC+  K+ +A    N + E G  P+
Sbjct: 477 MGEFFRALALWNDILARGYGR---STYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 507 QTTYQI----------------VREEMMEKGFIPDIEGHMYN 532
             TY+                 V+E+M ++  +P IE  +YN
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIE--LYN 573



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 220/475 (46%), Gaps = 71/475 (14%)

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
           ++ ST  D  CR  ++                    +      G++S+V++ N LL+ L 
Sbjct: 395 YSYSTLMDGFCREGLVTK--------------AISVYNEMLRVGIQSNVVTHNSLLKGLC 440

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G FED  +V+  M +R +  +  S+  +L+ L K G+  +A  +  D+ + G      
Sbjct: 441 RVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTY 500

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            +N +I+G+CK   + KM +A+  F  M E G  P+ VT+ TLIDG+CK  N+  A KV 
Sbjct: 501 AFNTMINGFCK---MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVK 557

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M    I   +  YNSLI GL    K  E + L  EM   GL PNVVT   LI G+C +
Sbjct: 558 EKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDE 617

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM------LDRGV- 395
             ++KA   + D+ E+G +P+VI  + ++ +  + GR+++A  +   M      LD G  
Sbjct: 618 GRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYF 677

Query: 396 ----------------------------LPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
                                       LP+   YN  IAGL + G V+  + I + L+ 
Sbjct: 678 DRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLL 737

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G      TY  L+      G    A SL DEM K       PNI+TYN LI G C+ G 
Sbjct: 738 RGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK---RGLAPNIITYNALINGLCKSGN 794

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           L+ A  L ++L  KGL PN  +Y I                +R +M+++G  P +
Sbjct: 795 LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSL 849



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 214/428 (50%), Gaps = 22/428 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  I + L+  Y KN +         R  D+ L+    S + L+    +EG       VY
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVY 417

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R  I+ N+ + N +L GLC+ G    A  +   M   GV+P  V+Y  L+D   K 
Sbjct: 418 NEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK- 476

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G+ ++A A++ D++  G   +   FNT+I+GFCK E +  A + F  M   G     
Sbjct: 477 --MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY +LI+G C  G ++EA  ++++M    + P++   N+LI G  K K   +   L  +
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +GLSP+V+TY TLI  +C EGR++ AF     M+++G  P+V   + +++ L R G 
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGR 654

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    ++ ++VN  +      ++ L  A   +  S+K    LDE     K    PN V 
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDE---SSKSFSLPNSVV 711

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMM 518
           YN+ I G C+ GK++DA  + + LL +G  P+  TY                  +R+EM+
Sbjct: 712 YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEML 771

Query: 519 EKGFIPDI 526
           ++G  P+I
Sbjct: 772 KRGLAPNI 779



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 208/398 (52%), Gaps = 42/398 (10%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGL 196
             K  G+ G+  + ++   L++   ++ K E+ E V +EM+R   + L+  ++  +++G 
Sbjct: 275 VLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGY 334

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+  K++ A  + ++M ++G+   +   N LI+GYCK G + +   A+ +   MV+  + 
Sbjct: 335 CRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSE---AERLLMRMVDWDLE 391

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P   +++TL+DGFC++  ++ A+ V+ EM   GI + VVT+NSL+ GLC  G  ++A+ +
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 317 RDEMMASGLKPNVVTS-----------------------------------NALINGFCK 341
              M+  G+ P+ V+                                    N +INGFCK
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + + +A   F+ + E G  P  +TY TLID YCK G +E+AF ++  M    +LP +  
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN LI GL +      V ++++E+   G+   +VTY  L+   C +G+  KA +     F
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT---AYF 628

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            M ++   PN++  + ++    + G++++AN LL +++
Sbjct: 629 DMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 169/338 (50%), Gaps = 32/338 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K  K  +V  +  EM  + +  N+ ++  ++ G C  G+L+KA     DM  
Sbjct: 573 NSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE 632

Query: 215 LGVSPKVVT----------------YNILI------DGYCKKGGIGKMYKADA------- 245
            G +P V+                  N+L+      D +   G   +++KAD        
Sbjct: 633 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQK 692

Query: 246 ---VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
                 +  ++  LPN V +N  I G CK   +  A K+F  +   G +    TY +LI+
Sbjct: 693 IADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIH 752

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G    G +++A +LRDEM+  GL PN++T NALING CK   +++A+ LFD +  +GL+P
Sbjct: 753 GYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAP 812

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+YN LID YCK G   +A  +RN ML  G+ P + TY+ LI G  ++G++    N++
Sbjct: 813 NVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLL 872

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +E+        +  +  LV    K G+ KK   L + M
Sbjct: 873 DEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 175/336 (52%), Gaps = 15/336 (4%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   L  N +    L+  +    +    F A+    + G   +V+ C++++ +L + G+ 
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRI 655

Query: 168 EDVEYVYKEMKRRRIELNLDSF--NFVLNGLCKA--GKLN--KASDIMEDMKSLGVSPKV 221
           ++   + ++M      +NLD F  +   + L KA  G L+  K +D +++       P  
Sbjct: 656 DEANMLLQKM------VNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNS 709

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           V YNI I G CK G   K+  A  +F  ++  G  P+  T+ TLI G+    N++ A  +
Sbjct: 710 VVYNIAIAGLCKSG---KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSL 766

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            +EM   G+A  ++TYN+LINGLC  G LD A  L D++   GL PNV++ N LI+G+CK
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
                +A  L + + ++G+SPS+ITY+ LI  +CK+G M  A  + + M +     +++ 
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAK 886

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           +  L+ G  + G V+ +  + N +      AG++++
Sbjct: 887 FVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISH 922



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 17/184 (9%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  KR    GL  ++++ N L+  L K G  +  + ++ ++  + +  N+ S+N +++G 
Sbjct: 769 EMLKR----GLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY 824

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G   +A D+   M   G+SP ++TY+ LI G+CK+G +GK   A  +  +M E    
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGK---ATNLLDEMRELFAD 881

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL----------INGLCV 306
            N   F  L++G  K   +    K+   M      AGV+++  +          +  LCV
Sbjct: 882 QNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDVFSNAKEMLKLCV 941

Query: 307 DGKL 310
           DG L
Sbjct: 942 DGCL 945


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 206/386 (53%), Gaps = 25/386 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  + G  E+  +VY +M    +   + + N VL+GL K G+ +    +  DM + G
Sbjct: 132 LIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG 188

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            SP VVTY  LIDG C++G   K ++   +F +M+E  I P  V +  LI G C +  IS
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFR---LFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F  M + G+   + TYN++++G C    + +A+ L  EM+  GL PNVVT   LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   +  AR    D++  G+ P++  YN LID YCK G + +A ++ + +    +L
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV TY+ LI GL     +E    ++ E+   G     VTYN L+   CK+G  +KA+ +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             +M +   E   PNI+T++ LI G+C+ GK+E A GL  E++ KGL+P+   Y      
Sbjct: 426 CSQMTEKGIE---PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482

Query: 513 ------------VREEMMEKGFIPDI 526
                       + +EM E G  P++
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNV 508



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 203/367 (55%), Gaps = 13/367 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+R L  E +  + E +++ M+   +  NL ++N +++G CK   + KA ++  +M   G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVT+ ILIDG CK     +M  A     DM   G++PN   +N LIDG+CK  N+S
Sbjct: 294 LLPNVVTFGILIDGLCKTD---EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+ +  E+  H I   V TY+ LI GLC   +++EA  L  EM   G  PN VT N LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+CK+  +EKA  +   ++E+G+ P++IT++TLID YCK G+ME A  +   M+ +G+L
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV  Y  LI G  ++GN +    +  E+   G+   + T + L+  LCKDG+   A+ L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 457 L----------DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                       +  ++++    PN V Y  LI+G C  G++  A+   +++   GL P+
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590

Query: 507 QTTYQIV 513
             T  ++
Sbjct: 591 VFTCIVI 597



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 248/470 (52%), Gaps = 24/470 (5%)

Query: 65  LTGRLLHSLVVAKKYPK----IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           L   ++H L  AK Y K    +R  +    K+ +     ++F+ LS    S    ++   
Sbjct: 72  LYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVF-G 130

Query: 121 MLMLAYVKNMKPHLGF--EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +L++A+ +     +G   EA        +  ++ +CN +L  LVK+G+F+ +  VY +M 
Sbjct: 131 VLIIAFSE-----MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R    N+ ++  +++G C+ G   KA  + ++M    + P VV Y ILI G C   G  
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC---GES 242

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A+++F+ M  +G+LPN  T+NT++DG+CK  ++  A++++ EM   G+   VVT+ 
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFG 302

Query: 299 SLINGLCVDGKLDEAVALRD---EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            LI+GLC   K DE V+ R    +M + G+ PN+   N LI+G+CK   + +A  L  +I
Sbjct: 303 ILIDGLC---KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +  + P V TY+ LI   C   RME+A  +   M  +G LP+  TYN LI G  +EGN+
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    + +++   G+   ++T++ L+   CK GK + A+ L  EM     +   P++V Y
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV---IKGLLPDVVAY 476

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             LI G  + G  ++A  L  E+ E GL PN  T   + + + + G I D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 208/398 (52%), Gaps = 19/398 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   + G+  ++ + N ++    K    +    +Y EM    +  N+ +F  +++GLCK
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK 310

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             ++  A   + DM S GV P +  YN LIDGYCK G +    +A ++  ++ ++ ILP+
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS---EALSLHSEIEKHEILPD 367

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T++ LI G C  + +  A  + +EM   G     VTYN+LI+G C +G +++A+ +  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M   G++PN++T + LI+G+CK   +E A  L+ ++  +GL P V+ Y  LID + K+G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM-------------NEL 425
             ++AF +   M + G+ P+V T +CLI GL ++G +     +              NEL
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
             +      V Y  L+  LC DG+  KA     +   M      P++ T  V+I+G  + 
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD---MRCSGLRPDVFTCIVIIQGHFRA 604

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             L D   L  ++L+ G+IPN + Y+++ +   E G++
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYL 642



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 16/330 (4%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
             +G+  ++   N L+    K G   +   ++ E+++  I  ++ +++ ++ GLC   ++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  ++++MK  G  P  VTYN LIDGYCK+   G M KA  V   M E GI PN +TF
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE---GNMEKAIEVCSQMTEKGIEPNIITF 441

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           +TLIDG+CK   + AAM ++ EM   G+   VV Y +LI+G   DG   EA  L  EM  
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLF-------------DDISEQGLSPSVITYNT 369
           +GL PNV T + LI+G CK   +  A  LF             +++     SP+ + Y  
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C +GR+  A    + M   G+ PDV T   +I G  R  ++  V  +  +++  G
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +      Y +L     + G  K A+S   E
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+  Y K        E   +  + G++ ++++ + L+    K GK E    +Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +  ++ ++  +++G  K G   +A  + ++M+  G+ P V T + LIDG CK 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 235 GGIGKMYKADAVFKDMVENGI---------------LPNEVTFNTLIDGFCKDENISAAM 279
           G I     +DA+   + + G                 PN V +  LI G C D  I  A 
Sbjct: 522 GRI-----SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKAS 576

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           K F +M   G+   V T   +I G      L + + L+ +++  G+ PN      L  G+
Sbjct: 577 KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGY 636



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 34/256 (13%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-GKLDEAVA 315
           P+E+       G   D+  + A+++F +M        +VT    ++  C D G LD    
Sbjct: 712 PHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSA-CADLGALDMGEW 770

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   +   GL  ++  +N+LIN + K   +  AR LFD   ++     V T+ ++I  + 
Sbjct: 771 IHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHA 826

Query: 376 KEGRMEDAFAMRNSMLDRG----------------VLPDVSTYNCLIAGLSREGNV-EGV 418
             G+ E+A  +   M +                  VLP+  T+  ++   S  G V EG 
Sbjct: 827 LHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGK 886

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNV 477
           ++  +   +  +R  +  +  +V  LC+ G       LL E ++ + K    PN V +  
Sbjct: 887 QHFRSMKEDYSLRPRISHFGCMVDLLCRAG-------LLTEAYEFILKMPVRPNAVVWRT 939

Query: 478 LIKGFCQKGKLEDANG 493
           L+     +G   D+NG
Sbjct: 940 LLGACSLQG---DSNG 952



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 66/212 (31%)

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISE-----------------------QGLS 361
           L  N    +A+I+     KL  KAR L  D+ +                          +
Sbjct: 66  LAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFT 125

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V  +  LI A+ + G +E+A  +   M    VLP +   N ++ GL ++G  + +  +
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             ++V  G                                        PN+VTY  LI G
Sbjct: 181 YGDMVARGAS--------------------------------------PNVVTYGTLIDG 202

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            C++G    A  L +E++EK + P    Y I+
Sbjct: 203 CCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 215/397 (54%), Gaps = 41/397 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL    ++ N LL  L K+ + E+V  + +EM     E +  S+N V+  LC++GK  +A
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKK-----------------------------GG 236
             I+E M      P VVTYN L+DG+CK                              GG
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311

Query: 237 IGKMYK-ADA--VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             +  + ADA  V +DM + GI P+ VT+N L+DG CK   +  A ++ E M     A  
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTY+ L+NGLC  GK+D+A  L + M+  G +PN+VT N +I+GFCK   V++   + +
Sbjct: 372 VVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + E   +P V+TY+TLID YCK  RM+DAFA+       G+ PD ++Y+ ++ GL   G
Sbjct: 432 LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSMLEGLCSTG 485

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            VE  + +M+ +   G       Y +++G LC   +  +A+ +L  M +   E   PN+ 
Sbjct: 486 KVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE---PNLY 542

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           TY++LI G C+  ++EDA  +L+ +LEKG +P+  TY
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 219/431 (50%), Gaps = 63/431 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +    S N ++  L + GK+E+   + ++M  ++   ++ ++N +++G CK  K+++A
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEA 286

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++EDM     +P V+TY  LI G+ +   +   Y+   V +DM + GI P+ VT+N L
Sbjct: 287 ERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR---VMEDMFKAGISPDLVTYNCL 343

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK   +  A ++ E M     A  VVTY+ L+NGLC  GK+D+A  L + M+  G 
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN+VT N +I+GFCK   V++   + + + E   +P V+TY+TLID YCK  RM+DAFA
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM--------------- 430
           +       G+ PD ++Y+ ++ GL   G VE  + +M+ +   G                
Sbjct: 464 IL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517

Query: 431 --------------------RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
                                  L TY+IL+  LCK  + + A+++LD M +   +   P
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE---KGCVP 574

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++ TY  LI GFC+  K++ A      + + G  P++  Y I                V 
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634

Query: 515 EEMMEKGFIPD 525
           + M+EKG  PD
Sbjct: 635 QLMLEKGCNPD 645



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 197/357 (55%), Gaps = 6/357 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L +  + ++   +  EM ++    +   +N ++ GLCK GK++ A ++++ M    
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+TY  LI G C+   + +  K   + + M E+G+ P+ V +N L++G CK   + 
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARK---LMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              K+ EEM   G      +YN+++  LC  GK +EA  + ++M+     P+VVT N+L+
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GFCK   +++A  L +D+  +  +P+VITY TLI  + +  R+ DA+ +   M   G+ 
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TYNCL+ GL + G +E    ++  +V       +VTY+ILV  LCK GK   A  L
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           L+ M    +    PN+VT+N +I GFC+ GK+++ + +L  + E    P+  TY  +
Sbjct: 395 LEMML---ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 207/376 (55%), Gaps = 12/376 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K GK +    V K M  R    ++ ++  ++ G C+   L++A  +ME MK 
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P  V YN L++G CK+  + ++ K   + ++MVE G  P+  ++NT++   C+   
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSK---LLEEMVEAGREPDTFSYNTVVACLCESGK 247

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A K+ E+M        VVTYNSL++G C   K+DEA  L ++M+     P V+T   
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI GF +   +  A  + +D+ + G+SP ++TYN L+D  CK G++E+A  +   M+++ 
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV TY+ L+ GL + G V+  R ++  ++  G +  LVT+N ++   CK GK  +  
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            +L+    M++    P++VTY+ LI G+C+  +++DA  +L      G+ P++ +Y  + 
Sbjct: 428 KVLE---LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSML 478

Query: 515 EEMMEKGFIPDIEGHM 530
           E +   G + + +  M
Sbjct: 479 EGLCSTGKVEEAQEVM 494



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 213/449 (47%), Gaps = 44/449 (9%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLM 123
           +LL  +V A + P   S+   +    ++GK+     I   +    +  C   ++  + LM
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI---EKKCGPDVVTYNSLM 274

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + K  K        +         +V++   L+    +  +  D   V ++M +  I 
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +L ++N +L+GLCKAGKL +A +++E M     +P VVTY+IL++G CK   +GK+  A
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK---LGKVDDA 391

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + + M+E G  PN VTFNT+IDGFCK   +    KV E M        VVTY++LI+G
Sbjct: 392 RLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451

Query: 304 -----------------------------LCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
                                        LC  GK++EA  + D M   G  P       
Sbjct: 452 YCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I G C  +  ++A  +   +SE+G  P++ TY+ LI+  CK  R+EDA  + + ML++G
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            +PDV+TY  LI G  +   ++        + ++G     + YNIL+   C+ G  +KA+
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAI 631

Query: 455 SLLDEMFKMEKEKKW-PNIVTYNVLIKGF 482
            ++  M     EK   P+  TY  L++  
Sbjct: 632 EVMQLML----EKGCNPDAATYFSLMRSL 656



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 190/412 (46%), Gaps = 80/412 (19%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++ G  +AG      +I  +M +   SP V+T+N ++  YC+   IG + +A + F
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQ---IGDLDRALSHF 82

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           +  +     P   T+  LI G C+ + I  A ++ +EM           YN LI GLC  
Sbjct: 83  RGKMWCS--PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140

Query: 308 GK-----------------------------------LDEAVALRDEMMASGLKPNVVTS 332
           GK                                   LDEA  L ++M  SGL P+ V  
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200

Query: 333 NALINGFCKKKLVEKARVLFDDISEQG--------------------------------- 359
           NAL+NG CK+  +E+   L +++ E G                                 
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260

Query: 360 --LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
               P V+TYN+L+D +CK  +M++A  +   M+ R   P V TY  LI G SR   +  
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +M ++   G+   LVTYN L+  LCK GK ++A  LL+ M  +EK+   P++VTY++
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM--VEKDCA-PDVVTYSI 377

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           L+ G C+ GK++DA  LL  +LE+G  PN  T+  + +   + G +   EGH
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD--EGH 427



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 176/375 (46%), Gaps = 33/375 (8%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDMLM 123
           RLL  +V  +  P + ++  +    G F+    +  A     D     +  + +  + L+
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLI---GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K  K     E  +   +      V++ + L+  L K GK +D   + + M  R  +
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-------- 235
            NL +FN +++G CKAGK+++   ++E MK +  +P VVTY+ LIDGYCK          
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464

Query: 236 -GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            GI                 GK+ +A  V   M + G  P    +  +I G C  E    
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+K+ + M   G    + TY+ LINGLC   ++++A+ + D M+  G  P+V T  +LI+
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           GFCK   ++ A   F  + + G  P  + YN LI  +C+ G +E A  +   ML++G  P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 398 DVSTYNCLIAGLSRE 412
           D +TY  L+  L+ E
Sbjct: 645 DAATYFSLMRSLTTE 659



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 155/331 (46%), Gaps = 52/331 (15%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL---- 300
           + F++   +   P+  T+  LI GF +  N    +++  EM +   +  V+T+N++    
Sbjct: 10  SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69

Query: 301 -----------------------------INGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
                                        I+GLC   ++DEA  L DEM+     P+   
Sbjct: 70  CQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CK   ++ AR +   + E+   P VITY +LI   C+   +++A  +   M 
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           + G+ PD   YN L+ GL ++  +E V  ++ E+V  G      +YN +V  LC+ GK +
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  +L+   KM ++K  P++VTYN L+ GFC+  K+++A  LL +++ +   P   TY 
Sbjct: 250 EAGKILE---KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYT 306

Query: 512 I----------------VREEMMEKGFIPDI 526
                            V E+M + G  PD+
Sbjct: 307 TLIGGFSRADRLADAYRVMEDMFKAGISPDL 337


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 132/376 (35%), Positives = 205/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  + +   ++  L K G  +    + K+M++ +IE N+  +N +++GLCK   ++ A
Sbjct: 216 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDA 275

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   M++ G+ P V TYN LI   C     G+   A  +  DM+E  I PN VTFN+L
Sbjct: 276 FDLFNKMETKGIKPDVFTYNSLISCLC---NYGRWSDASRLLSDMIERKINPNVVTFNSL 332

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+F+EM    I   +VTYNSLING C+  +LDEA  +   M++   
Sbjct: 333 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LI GFCK K VE+   LF ++S++GL  + +TYNTLI    + G  + A  
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV PD+ TY+ L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +      D    +  +   PN++ Y  +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 513 KAGKVEDG---WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569

Query: 506 NQTTYQIVREEMMEKG 521
           +   Y  +    +  G
Sbjct: 570 DSGCYNTLIRARLRDG 585



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 214/382 (56%), Gaps = 9/382 (2%)

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
            + P L F  ++RA  +  K+S     +L R  + E K +D   ++ EM + R   ++  
Sbjct: 27  TVSPSLSF-FWRRA--FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE 83

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ +L+ + K  K +    + E M++LG+     TY+IL++ +C++    ++  A AV  
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRS---QLPLALAVLG 140

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M++ G  P+ VT ++L++G+C  + IS A+ + ++M   G     VT+N+LI+GL +  
Sbjct: 141 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHN 200

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K  EAVAL D M+A G +P++ T   ++NG CK+  ++ A  L   + +  +  +V+ YN
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYN 260

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+ID  CK   M+DAF + N M  +G+ PDV TYN LI+ L   G       ++++++  
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +   +VT+N L+ A  K+GK  +A  L DEM +   +   PNIVTYN LI GFC   +L
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID---PNIVTYNSLINGFCMHDRL 377

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           ++A  +   ++ K  +P+  TY
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTY 399



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 239/473 (50%), Gaps = 15/473 (3%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSL 112
           EL+   ++ L G ++ S    + +P I  F   L    K  KF  V ++   +      +
Sbjct: 59  ELKLDDAVALFGEMVKS----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--I 112

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
             N     +L+  + +  +  L      +    G +  +++ + LL       +  +   
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           +  +M     + +  +FN +++GL    K ++A  +++ M + G  P + TY  +++G C
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K+G I     A ++ K M +  I  N V +NT+IDG CK +++  A  +F +M + GI  
Sbjct: 233 KRGDIDL---ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            V TYNSLI+ LC  G+  +A  L  +M+   + PNVVT N+LI+ F K+  + +A  LF
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D++ ++ + P+++TYN+LI+ +C   R+++A  +   M+ +  LPDV TYN LI G  + 
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             VE    +  E+   G+    VTYN L+  L + G    A  +     KM  +   P+I
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDI 466

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +TY++L+ G C+ GKLE A  +   L +  + PN  TY I+ E M + G + D
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 181/326 (55%), Gaps = 3/326 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ F +    G+K  V + N L+  L   G++ D   +  +M  R+I  N+ +FN +++
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              K GKL +A  + ++M    + P +VTYN LI+G+C      ++ +A  +F  MV   
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD---RLDEAQQIFTLMVSKD 391

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP+ VT+NTLI GFCK + +   M++F EM   G+    VTYN+LI GL   G  D A 
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  +M++ G+ P+++T + L++G CK   +EKA V+F+ + +  + P++ TYN +I+  
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G++ED + +  S+  +GV P+V  Y  +I+G  R+G  E    +  E+  +G     
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEM 460
             YN L+ A  +DG    +  L+ EM
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 179/307 (58%), Gaps = 4/307 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ N L+ A  KEGK  + E ++ EM +R I+ N+ ++N ++NG C   +L++A 
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            I   M S    P VVTYN LI G+CK     ++ +   +F++M + G++ N VT+NTLI
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLI 438

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A K+F++M S G+   ++TY+ L++GLC  GKL++A+ + + +  S ++
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN+ T N +I G CK   VE    LF  +S +G+ P+VI Y T+I  +C++G  E+A A+
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 558

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LPD   YN LI    R+G+      ++ E+ + G      T ++++  L  
Sbjct: 559 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 617

Query: 447 DGKSKKA 453
           DG+ +K+
Sbjct: 618 DGRLEKS 624



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A A+F +MV++   P+ + F+ L+    K       + + E+M + GI     TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            L+N  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K + +A  L D + E 
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P  +T+NTLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++  
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++ ++    + A +V YN ++  LCK      A  L +   KME +   P++ TYN L
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN---KMETKGIKPDVFTYNSL 297

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I   C  G+  DA+ LL++++E+ + PN  T+  + +   ++G + + E
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 7/152 (4%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI++D L   Y K  K  + FE  +++    ++ ++ + N ++  + K GK ED   ++ 
Sbjct: 470 SILLDGL-CKYGKLEKALVVFEYLQKSK---MEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            +  + ++ N+  +  +++G C+ G   +A  +  +MK  G  P    YN LI    + G
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 585

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
              K   A+ + K+M   G + +  T + +I+
Sbjct: 586 --DKAASAELI-KEMRSCGFVGDASTISMVIN 614


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 232/469 (49%), Gaps = 65/469 (13%)

Query: 115 NSIIIDMLMLAYVKNMKPHLG---FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF--ED 169
            S + D  + AY +   PHL      + +R    G++ S+ + N +L AL +      + 
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQA 191

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              V++ +   R+  N  +FN +++  C  G L  A   +  M+  G+SP  VTYN L++
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            +C+KG +G   +A A+   M  +GI P + T+NTL+  F +   I  A KV E M ++G
Sbjct: 252 AHCRKGMLG---EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRD------------------------------- 318
               + TYN L  GLC  GK+DEA  L+D                               
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 319 -----EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                EM   G+KP +VT N ++   CK+  +E+A    + I+E+GL+P VITYNTLIDA
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK G +  AF + + M+ +G+  D  T N ++  L +    E    +++     G    
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            V+Y  ++ A  K+   + A+ L D+M    + K  P+I TYN LIKG C+  +L++A  
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMI---ERKLIPSISTYNTLIKGLCRMERLKEAID 545

Query: 494 LLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            LNEL+EKGL+P++TTY I+                  +M+E  F PD+
Sbjct: 546 KLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 240/518 (46%), Gaps = 54/518 (10%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           LR  H   L  +LLHSL   ++   +R  L     N   +++S     L   S  + R+ 
Sbjct: 148 LRLPH---LAAQLLHSL---RRRRGVRPSLQ--AANAVLSALSRSPSTLPQASLDVFRSL 199

Query: 117 IIIDMLMLAYVKNMKPHL---------GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           I + +    Y  N+  H                    +GL    ++ N LL A  ++G  
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGML 259

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            +   +   MKR  I     ++N +++   + G + +A+ ++E M + G  P + TYN+L
Sbjct: 260 GEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319

Query: 228 IDGYCKKGGIGKMYK---------------------ADAVFK------------DMVENG 254
             G C+ G + + ++                      DA FK            +M + G
Sbjct: 320 AVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P  VT N ++   CK+  +  A+   E++   G+A  V+TYN+LI+  C  G + +A 
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L DEM+  GLK +  T N ++   CK K  E A  L     ++G  P  ++Y T++ AY
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            KE   E A  + + M++R ++P +STYN LI GL R   ++   + +NELV  G+    
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TYNI++ A CK+G  + A    ++M  +E   K P++VT N L+ G C  GKL+ A  L
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKM--VENSFK-PDVVTCNTLMNGLCLHGKLDKALKL 616

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
               +EKG   +  TY  + + M + G + D   H ++
Sbjct: 617 FESWVEKGKKVDVITYNTLIQSMCKVGDV-DTALHFFD 653



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 197/378 (52%), Gaps = 6/378 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ A  K     D   + +EM+ + ++  L + N V+  LCK GKL +A   +E
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +   G++P V+TYN LID YCK G + K +    +  +MV  G+  +  T NT++   C
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAF---TLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K +    A ++       G     V+Y +++     +   + A+ L D+M+   L P++ 
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI G C+ + +++A    +++ E+GL P   TYN +I AYCKEG +E+AF   N M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++    PDV T N L+ GL   G ++    +    V  G +  ++TYN L+ ++CK G  
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A+   D+M   E +   P+  TYNV++    + G+ E+A+ +L++L + G +      
Sbjct: 646 DTALHFFDDM---EVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFAC 702

Query: 511 QIVREEMMEKGFIPDIEG 528
            +++    ++  + + EG
Sbjct: 703 PLLKPSSADEADVKEHEG 720



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 217/410 (52%), Gaps = 36/410 (8%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+K ++++ N ++++L KEGK E+     +++    +  ++ ++N +++  CKAG + 
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +M++M   G+     T N ++   CK   + +   A+ +     + G +P+EV++ 
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCK---MKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T++  + K+ N   A++++++M    +   + TYN+LI GLC   +L EA+   +E++  
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+  T N +I+ +CK+  +E A    + + E    P V+T NTL++  C  G+++ A
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +  S +++G   DV TYN LI  + + G+V+   +  +++   G++    TYN+++ A
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 444 LCKDGKSKKAVSLLDEMFKMEK--------------------------------EKKWPN 471
           L + G+S++A ++L ++    K                                EK   N
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 472 IV-TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + TY   + G C  G+L++A  +L+E+++KG+  + +TY  + E ++++
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKR 783



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 179/380 (47%), Gaps = 9/380 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           + L  + I  + L+ AY K       F         GLK    + N +L  L K  ++ED
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED 472

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +     +R    +  S+  V+    K      A  + + M    + P + TYN LI 
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C+   + ++ +A     ++VE G++P+E T+N +I  +CK+ ++  A +   +M  + 
Sbjct: 533 GLCR---MERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               VVT N+L+NGLC+ GKLD+A+ L +  +  G K +V+T N LI   CK   V+ A 
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             FDD+  +GL P   TYN ++ A  + GR E+A  M + + D G L        L    
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSS 709

Query: 410 SREGNV-EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           + E +V E       E         L TY   +  LC  G+ K+A ++LDEM     +K 
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMM----QKG 765

Query: 469 WP-NIVTYNVLIKGFCQKGK 487
            P +  TY  L++G  ++ K
Sbjct: 766 MPVDSSTYITLMEGLIKRQK 785



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 4/211 (1%)

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L PN  T N L++  C K  +  A      +   GLSP  +TYNTL++A+C++G + +A 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           A+   M   G+ P   TYN L++  +R G ++    ++  +   G    L TYN+L   L
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL-EDANGLLNELLEKGL 503
           C+ GK  +A  L DEM ++      P++VTYN L+   C K +   DA  LL E+ +KG+
Sbjct: 324 CQAGKVDEAFRLKDEMERLST--ALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGV 380

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
            P   T+ IV + + ++G + +  G +  I+
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIA 411


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 208/357 (58%), Gaps = 9/357 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++  L K  K +    ++K+M  + I  ++ ++  +++GL K  ++ +A D+ E+ ++ G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNTLIDGFCKDENI 275
             P VVTYN +IDG CK    G++  A  ++ DM +  G  P  VT++TLIDG C+D  +
Sbjct: 61  CHPTVVTYNTMIDGLCK---CGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEV 117

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
               K+ EEM   G A   VTYN+L+N L   G+  EA +L ++M A+G  P ++T   +
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 336 INGFCKKKLVEKARVLFDD--ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           I G CK+  +E A  + D+  + E GLSP VIT+N+++D  CKE R+ DA  +    L+R
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+V TY+ LI GLS+   ++    ++ ++V  G RA  VTY+ +V  L K G+ + A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           V +L +   M      P+ VTYN LI GF ++ +L +A GLL E+LE G  P+  TY
Sbjct: 298 VVVLRQ---MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 351



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 222/415 (53%), Gaps = 18/415 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LC+   I + L L    +M  H GF           + +V++ + L+  L ++ + + 
Sbjct: 73  DGLCKCGRIENALTL--YDDMAIHFGF-----------RPTVVTYSTLIDGLCRDHEVDK 119

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + +EM  R    N  ++N ++N L   G+  +A  ++E M + G  P+++T+ ++I 
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 230 GYCKKGGIGKMYKA-DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           G CK+G I   ++  D +F  M+E+G+ P+ +TFN+++DG CK++ I  A  VF+     
Sbjct: 180 GLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G    VVTY++LI+GL    K+DEA+ L  +M+  G + N VT + +++G  K   +E A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            V+   + + G  P  +TYNTLID + K  R+ +A  +   ML+ G  P V TY  L  G
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R G  +    I++ +   G     +TY+ +V  LCK G+  +A+   ++M +   E  
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR--DEVV 415

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            P+++ Y+ LI G C+ GK+++A   L  ++  G IP+  T+ I+   + + G I
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 470



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 208/368 (56%), Gaps = 9/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   + ++ N L+ AL+ +G+ ++   + ++M        L +F  ++ GLCK G++  A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190

Query: 206 SDIMEDMKSL--GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
             ++++M  +  G+SP V+T+N ++DG CK+    ++  A  VFK  +E G  PN VT++
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ---RILDAHNVFKRALERGCRPNVVTYS 247

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLIDG  K   +  A+++  +M   G  A  VTY+++++GL   G++++AV +  +M  +
Sbjct: 248 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+ VT N LI+GF K++ + +A  L  ++ E G  PSV+TY TL    C+ GR ++A
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG-LVTYNILVG 442
             + + M  RG  P+  TY+ ++ GL + G V        ++  + + A  ++ Y+ L+ 
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 427

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK GK  +A   L+ M +     + P++VT+++LI G C  G+++    L   + E+G
Sbjct: 428 GLCKAGKIDEAYEFLERMIR---AGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERG 484

Query: 503 LIPNQTTY 510
            +P+  TY
Sbjct: 485 CVPDMVTY 492



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 221/410 (53%), Gaps = 9/410 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ K       FK+  D  +   V++   L+  L K+ + ++   +++E + +     + 
Sbjct: 7   KSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 66

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMK-SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           ++N +++GLCK G++  A  + +DM    G  P VVTY+ LIDG C+   + K  K   +
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCK---L 123

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            ++M   G  PN VT+NTL++          A  + E+M ++G    ++T+  +I GLC 
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 307 DGKLDEAVALRDE--MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           +G+++ A  + DE  M+ SGL P+V+T N++++G CK++ +  A  +F    E+G  P+V
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY+TLID   K  +M++A  +   M++ G   +  TY+ ++ GL + G +E    ++ +
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           + + G     VTYN L+    K  + ++AV LL EM    +    P++VTY  L  G C+
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML---EAGFHPSVVTYTTLCHGLCR 360

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
            G+ ++A  +L+ +  +G  PN  TY  + + + + G + +  G+   ++
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 410



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 190/353 (53%), Gaps = 7/353 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N +L  L KE +  D   V+K    R    N+ +++ +++GL K  K+++A
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M  LG     VTY+ ++DG  K   +G+M  A  V + M + G LP+ VT+NTL
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLK---VGRMEDAVVVLRQMRDAGCLPDAVTYNTL 319

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGF K + +  A+ +  EM   G    VVTY +L +GLC  G+ DEAV + D M A G 
Sbjct: 320 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDIS-EQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            PN +T +++++G CK   V +A   F+ ++ ++ ++P VI Y+ LID  CK G++++A+
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                M+  G +PDV T++ LI GL   G ++    +   +   G    +VTY  LV  L
Sbjct: 440 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           C+  +  +A  L  +   M  +   P+  T   +I G  +  + EDA  + +E
Sbjct: 500 CRASRVDEAFDLFQQ---MRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 179/303 (59%), Gaps = 11/303 (3%)

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +IDG CK     K+ KA  +FK MV+  I P+ VT+  LIDG  K   +  A  +FEE  
Sbjct: 1   MIDGLCKSR---KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR 57

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPNVVTSNALINGFCKKKLV 345
           + G    VVTYN++I+GLC  G+++ A+ L D+M +  G +P VVT + LI+G C+   V
Sbjct: 58  AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEV 117

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +K   L ++++ +G +P+ +TYNTL++A   +GR ++AF++   M   G  P++ T+  +
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 406 IAGLSREGNVEGVRNIMNE--LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           I GL +EG +E    +++E  ++ +G+   ++T+N ++  LCK+ +   A      +FK 
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDA----HNVFKR 233

Query: 464 EKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             E+   PN+VTY+ LI G  +  K+++A  LL +++E G   N  TY  V + +++ G 
Sbjct: 234 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 293

Query: 523 IPD 525
           + D
Sbjct: 294 MED 296



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 182/355 (51%), Gaps = 26/355 (7%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LC+   I+D                  FKRA + G + +V++ + L+  L K  K ++
Sbjct: 216 DGLCKEQRILD--------------AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 261

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +  +M       N  +++ V++GL K G++  A  ++  M+  G  P  VTYN LID
Sbjct: 262 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 321

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+ K+    ++ +A  + ++M+E G  P+ VT+ TL  G C+      A+++ + M + G
Sbjct: 322 GFFKR---QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVAL-----RDEMMASGLKPNVVTSNALINGFCKKKL 344
            A   +TY+S+++GLC  G++ EA+       RDE++A    P+V+  +ALI+G CK   
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA----PHVIAYSALIDGLCKAGK 434

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A    + +   G  P V+T++ LI+  C  GR++    +   M +RG +PD+ TY  
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           L+  L R   V+   ++  ++ ++G+     T   ++  L +  + + A  + DE
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 242/461 (52%), Gaps = 25/461 (5%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
            R  L  F K GK      +F  +    + +  + I  ++L+  Y K  +       ++ 
Sbjct: 11  FRVVLKSFCKQGKLRDGYKLFEQM--LDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               GL+ S+ + N LL A  KE K ++   ++K M  +  E ++ +++ +++GLCK GK
Sbjct: 69  MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128

Query: 202 LNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           + +A +++   M   G S   V YN LI+G CK   I + YK   + ++M   G +P+ +
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK---LLEEMASKGYVPDNI 185

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+NT++ G C+   +S A + F+ M S G +  VV YN L++ L  +GK DEA+ L  ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +A G  P+ VT N+++ G  +K  +++A  +F  +   G +P+  TY+ ++  +C+  ++
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +DA  +   M   G +PDV TYN L+ GL +   V+    + + +V+NG    +V+Y+++
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LCK  K   A  L D M +    K  P++VT+N+L+ G C+ GKL++A  LL+++  
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIE---RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422

Query: 501 KGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            G  P+   Y                  + + M EKGF+ D
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 221/407 (54%), Gaps = 5/407 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N     +++ ++ K  K   G++ F++  D G+    +  N L+    K+G+ ++   +Y
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM    +E ++ ++N +LN  CK  K+ +A ++ + M   G  P VVTY+ +I G CK 
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + +    + +F  M+E G   N V +N LI+G CKDENI  A K+ EEM S G     
Sbjct: 127 GKVTEAL--EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN++++GLC  GK+ EA    D M + G  P+VV  N L++   K+   ++A  LF D
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P  +TYN+++    ++  M++A  M   M+  G  P+ +TY+ +++G  R   
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+    ++ E+   G    +VTYNIL+  LCK     KA  L   M         P+IV+
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV---DNGCAPDIVS 361

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           Y+V++ G C+  K+ DA  L + ++E+ L+P+  T+ I+ + + + G
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 223/387 (57%), Gaps = 23/387 (5%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           +L++  K+GK  D   ++++M    I  +   +N +++G  K G++++A+ + E+M S+G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P + TYN L++ +CK+    KM +A  +FK M E G  P+ VT++T+I G CK   ++
Sbjct: 74  LEPSIYTYNSLLNAFCKET---KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130

Query: 277 AAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            A++ +F +M   G +A  V YN+LINGLC D  ++ A  L +EM + G  P+ +T N +
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ++G C+   V +A+  FD +  +G SP V+ YN L+DA  KEG+ ++A  +   ++ +G 
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY 250

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PD  TYN ++ GL+R+ N++    +  ++V +G      TY+I++   C+  K   A  
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR- 514
           +L+EM K+      P++VTYN+L+ G C+   ++ A+ L + +++ G  P+  +Y +V  
Sbjct: 311 VLEEMSKI---GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 515 ---------------EEMMEKGFIPDI 526
                          + M+E+  +PD+
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDV 394



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 183/333 (54%), Gaps = 25/333 (7%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP   T+ +++  +CK+G +   YK   +F+ M++NGI P+ + +N LIDG+ K   +  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYK---LFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A +++EEM S G+   + TYNSL+N  C + K+ EA+ L   M   G +P+VVT + +I+
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 338 GFCKK-KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           G CK  K+ E   +LF  + E+G S + + YN LI+  CK+  +E A+ +   M  +G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TYN +++GL R G V   +   + + + G    +V YN L+ AL K+GK+ +A+ L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             ++     +   P+ VTYN ++ G  +K  +++A  +  +++  G  PN  TY I    
Sbjct: 242 FKDVI---AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298

Query: 513 ------------VREEMMEKGFIPDIEGHMYNI 533
                       V EEM + G +PD+    YNI
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVV--TYNI 329


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 259/521 (49%), Gaps = 33/521 (6%)

Query: 8   TIEDITELIRNHHWSKLKNTDPNTVIL----QLFNSDADPVLI------LRYFCWSTKEL 57
           T E I++ + +  W  ++   PN         L+N  + P L+      L   C  TK  
Sbjct: 70  TZEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSY 129

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI 117
               +++L  RL          PK+   L   V   +  +   +F  L+   D L   S 
Sbjct: 130 --CLAVVLLARL--------PSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSS 179

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I+  L+   +K  +  +GF         G K +V+S N ++      G  E    +   M
Sbjct: 180 IVFDLLEGKLKKAREFIGFME-----GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 234

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           + + IE +  ++  +++G+CK G+L +AS + + M  +G+ P  VTYN LIDGYC KG +
Sbjct: 235 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 294

Query: 238 GKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            + +     ++D MV+ GI+P+  T+N L+     +  +  A  + +EM   GI    +T
Sbjct: 295 ERAFS----YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 350

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LING    G    A  L +EM++ G++P  VT  +LI    ++  +++A  LF+ I 
Sbjct: 351 YNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 410

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           +QG+SP VI +N +ID +C  G +E AF +   M  + V PD  T+N L+ G  REG VE
Sbjct: 411 DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 470

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             R +++E+   G++   ++YN L+    + G  K A  + DEM  +      P ++TYN
Sbjct: 471 EARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFN---PTLLTYN 527

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            LIK  C+  + + A  LL E++ KG+ P+ +TY  + E M
Sbjct: 528 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 48/337 (14%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GK+ KA      M   G  PN V++NT+I G+    NI  A ++ + M   GI     TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            SLI+G+C +G+L+EA  L D+M+  GL PN VT N LI+G+C K  +E+A    D++ +
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G+ PSV TYN L+ A   EGRM +A  M   M  +G++PD  TYN LI G SR GN + 
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF---------------- 461
             ++ NE+++ G+    VTY  L+  L +  + K+A  L +++                 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 462 ----------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                           +M+++   P+ VT+N L++G C++GK+E+A  LL+E+  +G+ P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 506 NQTTYQI----------------VREEMMEKGFIPDI 526
           +  +Y                  VR+EM+  GF P +
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTL 523



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 177/333 (53%), Gaps = 8/333 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +    K G+    S +F  +      L  N++  + L+  Y         F       
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIG--LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+  SV + N L+ AL  EG+  + + + KEM+++ I  +  ++N ++NG  + G   
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D+  +M S G+ P  VTY  LI    ++    +M +AD +F+ +++ G+ P+ + FN
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN---RMKEADDLFEKILDQGVSPDVIMFN 422

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +IDG C + N+  A  + +EM    +    VT+N+L+ G C +GK++EA  L DEM   
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+KP+ ++ N LI+G+ ++  ++ A  + D++   G +P+++TYN LI   CK    + A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             +   M+++G+ PD STY  LI G+   GNV+
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGM---GNVD 572



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 137/251 (54%), Gaps = 28/251 (11%)

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           ++GKL +A      M   G KPNVV+ N +I+G+  +  +E AR + D +  +G+ P   
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY +LI   CKEGR+E+A  + + M++ G++P+  TYN LI G   +G++E   +  +E+
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQ 484
           V  G+   + TYN+LV AL  +G+  +A    D+M K M K+   P+ +TYN+LI G+ +
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEA----DDMIKEMRKKGIIPDAITYNILINGYSR 360

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD--- 525
            G  + A  L NE+L KG+ P   TY                  + E+++++G  PD   
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420

Query: 526 ----IEGHMYN 532
               I+GH  N
Sbjct: 421 FNAMIDGHCAN 431



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 24/201 (11%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R LFD+++   LS   ++  + I     EG+++ A      M   G  P+V +YN +I G
Sbjct: 161 RELFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG 217

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            S  GN+EG R I++ +   G+     TY  L+  +CK+G+ ++A  L D+M ++     
Sbjct: 218 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI---GL 274

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
            PN VTYN LI G+C KG LE A    +E+++KG++P+ +TY ++               
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 334

Query: 515 --EEMMEKGFIPDIEGHMYNI 533
             +EM +KG IPD     YNI
Sbjct: 335 MIKEMRKKGIIPD--AITYNI 353


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/481 (33%), Positives = 247/481 (51%), Gaps = 27/481 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNG---KFTSVSTIFHALSTCS-DSLCRNSIIIDMLML 124
           +LH L+ +  +   +S L   +         + S++FH L+    DS   + +I + ++ 
Sbjct: 31  ILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIIN 90

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A+V++  P        +    GL     + N LL  L+K   FE    V+ E K   ++L
Sbjct: 91  AHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKL 149

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ SF  ++ G C+ G L+K  +++  M+ +G+SP VV Y  LIDG CK G I +     
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIER---GK 206

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F  M E  ++ N+ T+  LI+GF K       ++++E+M   GI   V TYNS+I   
Sbjct: 207 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 266

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C DGKL+ A  L DEM   G+  NVVT N LI G C+++ V +A  L   +   GLSP++
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I+YNTLID YC  G ++ A ++ N M   G  P ++TYN LIAG S   N  GV +++ E
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G+    VTY IL+ AL +    +KA  +      MEK     +I  Y VLI G C 
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS---SMEKAGLVADIYIYGVLIHGLCV 443

Query: 485 KGKLEDANGLLNELLEKGLIPNQ--------------TTYQIVR--EEMMEKGFIPDIEG 528
            G +++A+ L   L E  L PN               ++Y+ +R  +EM E G +P++  
Sbjct: 444 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503

Query: 529 H 529
           +
Sbjct: 504 Y 504



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 41/382 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GFE   +  + GL  +V+    L+    K G  E  + ++ +M    +  N  ++  ++N
Sbjct: 170 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 229

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  K G      ++ E MK  G+ P V TYN +I   C+    GK+  A  +F +M E G
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI---CRCCNDGKLNNAFELFDEMRERG 286

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           +  N VT+NTLI G C++  +  A ++   M   G++  +++YN+LI+G C  G LD+A 
Sbjct: 287 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 346

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L ++M +SG  P++ T N LI GF + K       +  ++  +GLSPS +TY  L+DA 
Sbjct: 347 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 406

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS------------------------ 410
            +   +E AF + +SM   G++ D+  Y  LI GL                         
Sbjct: 407 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 466

Query: 411 -----------REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
                      +EG+      ++ E+  NGM   + +YN  +  LCKD K  +A  LL +
Sbjct: 467 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKD 526

Query: 460 MFKMEKEKKWPNIVTYNVLIKG 481
           M ++  +   P+I  +N++ K 
Sbjct: 527 MIELGLK---PSISIWNMISKA 545


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 245/467 (52%), Gaps = 24/467 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +LL +L+  K+Y  +              S+ TI  +  T   SL   SI+I+    A+ 
Sbjct: 74  KLLSTLIKLKRYNAV-------------VSLYTILQSKPTIKPSLITFSILIN----AFA 116

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           +  +    F         G +  V     L++ L  +G+  +   +  E   R    +  
Sbjct: 117 QLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEV 176

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +  ++NGLCK GK   A  +   MK + V P ++ YN +IDG CK+G +    +A  + 
Sbjct: 177 CYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD---EACGLC 233

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCV 306
            +MVENGI  +  ++N++I GFC      AA+K+ +EM   G +   V T+N LI+GLC 
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G++ EA  +   M+  G KP++V+ NAL+NG+C    V +A+ +FD + E+   P+VI+
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVIS 353

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y TLI+ YCK   +++A  +   M ++ ++PD  TYNCL+ GLS+ G      +++  + 
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMR 413

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G  A L+TYN+L+    K  K  KA++L   + ++      PNI TYN+L+ G C+ G
Sbjct: 414 ASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGIS---PNIRTYNILLDGLCKSG 470

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +L+ A  +   L  KG  PN  TY I+   + ++GF+ + E  +Y +
Sbjct: 471 RLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 203/379 (53%), Gaps = 9/379 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G +   +    ++  L K GK  D   ++ +MK+ R+  NL  +N V++GLCK G ++
Sbjct: 168 DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD 227

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTF 262
           +A  +  +M   G+   V +YN +I G+C    +G+   A  +  +MV  G + P+  TF
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFC---SVGRFQAAVKLLDEMVVRGKVYPDVYTF 284

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LIDG CK   +S A  V   M   G    +V+YN+L+NG C+ G + EA  + D+M+ 
Sbjct: 285 NILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVE 344

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
               PNV++   LING+CK ++V++A VL  ++  + L P  +TYN L+D   K GR   
Sbjct: 345 RTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLY 404

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
            + +  +M   G   D+ TYN L+    +    +    +   ++  G+   + TYNIL+ 
Sbjct: 405 EWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            LCK G+ K A     E+F++   K   PNI TYN++I G C++G L++A  LL +++  
Sbjct: 465 GLCKSGRLKYA----KEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 502 GLIPNQTTYQIVREEMMEK 520
             +PN  T+  +   ++ K
Sbjct: 521 NYLPNYITFDTIVRAILVK 539



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 179/335 (53%), Gaps = 8/335 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           FN +L+ L K  + N    +   ++S   + P ++T++ILI+ + +   +G+M  A ++ 
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQ---LGQMGFAFSLL 128

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            ++++ G   +     TL+ G C    +  A+ +  E    G     V Y ++INGLC  
Sbjct: 129 GNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKI 188

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK  +A+ +  +M    + PN++  N +I+G CK+ LV++A  L  ++ E G+   V +Y
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           N++I  +C  GR + A  + + M+ RG V PDV T+N LI GL + G V    N++  ++
Sbjct: 249 NSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMI 308

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G +  +V+YN L+   C  G   +A  + D   KM +    PN+++Y  LI G+C+  
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD---KMVERTALPNVISYCTLINGYCKVR 365

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +++A  LL E+  K L+P+  TY  + + + + G
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 253/493 (51%), Gaps = 59/493 (11%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +LL +LV  K Y  + S      +  +F  VS   + L+   + LC   ++         
Sbjct: 109 QLLAALVRMKHYDSVVSIY----RKMEFFGVSCSVYTLTILINCLCHLHLV--------- 155

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF----EDVEYVYKE------- 176
                 LGF    +    G K S+++ N L+  L  EG+     E ++Y+          
Sbjct: 156 -----GLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVY 210

Query: 177 --------------------MKRRRIELNLD----SFNFVLNGLCKAGKLNKASDIMEDM 212
                                 ++ +EL+ +    S++ +++ LCK   +N+A D+   M
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +S+G+SP VVTYN LI G C  G   +  +A  +FK+M+E  + P+ VTF+ L+D  CK+
Sbjct: 271 RSIGISPTVVTYNSLIYGMCNSG---QWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A+ VF +M    +   +VTY+SLI+G+C      E+  L +EM++  ++P+VVT 
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTF 387

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           +  ++ FCKK +V +A+ + + + E+GL P+V+TYN+L+D YC   +M++A  + + M++
Sbjct: 388 SIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN 447

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G  PDV +YN LI G  +   ++  + + +E+ + G+    +T+  L+  LC+ G+   
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYA 507

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L     KM      P+++TY+ L+ GFC+ G L++A  L   L +  L PN    +I
Sbjct: 508 AKELFK---KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 513 VREEMMEKGFIPD 525
           +   M + G + D
Sbjct: 565 LLGGMCKAGKLED 577



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 208/399 (52%), Gaps = 35/399 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           NQLL ALV+   ++ V  +Y++M+   +  ++ +   ++N LC    +     ++  +  
Sbjct: 108 NQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFK 167

Query: 215 LGVSPKVVTYNILIDGYCKKG--------------------------------GIGKMYK 242
           LG  P ++T+N LI+G C +G                                 IGK   
Sbjct: 168 LGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSA 227

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A    K MVE    P  V+++ +ID  CK+  ++ A+ +F  M S GI+  VVTYNSLI 
Sbjct: 228 AIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G+C  G+  +A  L  EM+   +KP+VVT + L++  CK+ +V +A  +F  + +  + P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            ++TY++LI   CK    +++  + N ML R + PDV T++  +    ++G V   ++I+
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           N ++  G+R  +VTYN L+   C   +  +A  + D M     +   P++++YN+LIKG+
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV---NKGCAPDVLSYNILIKGY 464

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           C+  ++++A  L +E+  KGL PN  T+  +   + + G
Sbjct: 465 CKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 191/354 (53%), Gaps = 9/354 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +   SIIID L     KN   +   + F      G+  +V++ N L+  +   G++
Sbjct: 240 CEPEVVSYSIIIDSL----CKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    ++KEM    ++ ++ +F+ +++ LCK G + +A  +   M  + + P +VTY+ L
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 228 IDGYCKKGGIGKMYK-ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           I G CK      ++K +  +  +M+   I P+ VTF+  +D FCK   +S A  +   M 
Sbjct: 356 IHGVCKSS----LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   VVTYNSL++G C+  ++DEA  + D M+  G  P+V++ N LI G+CK + ++
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A+ LFD++S +GL+P+ IT+ TLI   C+ GR   A  +   M   G  PD+ TY+ L+
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +G  + G+++    +   L  + ++   V   IL+G +CK GK + A  L   +
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 195/383 (50%), Gaps = 24/383 (6%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+D    + +M        +  FN +L  L +    +    I   M+  GVS  V T  I
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI+  C    +G  +   +V   + + G  P+ +TFNTLI+G C +  I  AM+  + + 
Sbjct: 145 LINCLCHLHLVGLGF---SVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S G    V T+  ++NGLC  GK   A+    +M+    +P VV+ + +I+  CK +LV 
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVN 261

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  LF  +   G+SP+V+TYN+LI   C  G+ + A  +   ML+  + PDV T++ L+
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L +EG V    ++  +++   M   +VTY+ L+  +CK    K++ +LL+EM      
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY---------------- 510
              P++VT+++ +  FC+KG + +A  ++N ++E+GL PN  TY                
Sbjct: 382 ---PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
           + V + M+ KG  PD+    YNI
Sbjct: 439 RKVFDIMVNKGCAPDVLS--YNI 459



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 156/296 (52%), Gaps = 17/296 (5%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
             S   D+LC+  ++++ L                F +     ++  +++ + L+  + K
Sbjct: 316 TFSILVDALCKEGVVLEAL--------------SVFGKMIQIAMEPDIVTYSSLIHGVCK 361

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
              +++   +  EM  R I  ++ +F+  ++  CK G +++A  I+  M   G+ P VVT
Sbjct: 362 SSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVT 421

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN L+DGYC      +M +A  VF  MV  G  P+ +++N LI G+CK E I  A ++F+
Sbjct: 422 YNSLMDGYCLHS---QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFD 478

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM   G+    +T+ +LI+GLC  G+   A  L  +M + G  P+++T + L++GFCK  
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            +++A  LF+ + +  L P+ +    L+   CK G++EDA  + +S+    + PDV
Sbjct: 539 HLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 38/338 (11%)

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N  +   CK G       A A F  MV     P    FN L+    + ++  + + ++ +
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 285 MGSHGIAAGVVTYNSL-----------------------------------INGLCVDGK 309
           M   G++  V T   L                                   INGLC++G+
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA+   D +M+ G +P V T   ++NG CK      A V    + E    P V++Y+ 
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID+ CK   + +A  +   M   G+ P V TYN LI G+   G  +    +  E++   
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           M+  +VT++ILV ALCK+G   +A+S+  +M ++  E   P+IVTY+ LI G C+    +
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME---PDIVTYSSLIHGVCKSSLWK 366

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++ LLNE+L + + P+  T+ I  +   +KG + + +
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 213/368 (57%), Gaps = 7/368 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKE-MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+ ++ + V  E M       ++ ++N ++ GLCK G L  A ++M +M+
Sbjct: 357 NTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ 416

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G  P V+TY ILID +CK+G   ++ +A  V  +M   G+  N V +N LI   CKDE
Sbjct: 417 IKGCEPNVITYTILIDRFCKEG---RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A+ +F +M S G    + T+NSLI GLC   K +EA+ L  +M+  G+  N +T N
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+ F ++  +++A  L +D+  +G     ITYN LI A C+ G +E   A+   M+ +
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P+  + N LI GL R GN++     + ++++ G+   +VTYN L+  LCK G++++A
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 653

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++L D   K++ E   P+ +TYN LI   C++G  +DA+ LL+  ++ G IPN+ T+ I+
Sbjct: 654 LNLFD---KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710

Query: 514 REEMMEKG 521
               +++G
Sbjct: 711 VSNFIKEG 718



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 205/381 (53%), Gaps = 11/381 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  +   L+  L + GK ++   +  ++    + L    FN ++NG    G+L++A
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEA 372

Query: 206 SDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             +M E M S+G  P + TYN LI G CKKG    +  A  +  +M   G  PN +T+  
Sbjct: 373 KAVMHESMLSVGCGPDIFTYNTLILGLCKKG---YLVSARELMNEMQIKGCEPNVITYTI 429

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID FCK+  +  A  V +EM   G+A   V YN LI+ LC D K+ +A+ +  +M + G
Sbjct: 430 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            KP++ T N+LI G CK    E+A  L+ D+  +G+  + ITYNTLI A+ + G M++A 
Sbjct: 490 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N ML RG   D  TYN LI  L R GN+E    +  ++++ G+    ++ NIL+  L
Sbjct: 550 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 609

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G  + A+  L +M         P+IVTYN LI G C+ G+ ++A  L ++L  +G+ 
Sbjct: 610 CRTGNIQHALEFLRDMIH---RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666

Query: 505 PNQTTYQIVREEMMEKGFIPD 525
           P+  TY  +     ++G   D
Sbjct: 667 PDAITYNTLISWHCKEGMFDD 687



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 206/395 (52%), Gaps = 32/395 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G   + +    L+ AL K G+  +V  + +EM       ++++FN  ++GLCK  ++++
Sbjct: 246 HGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHE 305

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------- 237
           A+ +++ M   G +P   TY +L+ G C+ G +                           
Sbjct: 306 AAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVS 365

Query: 238 -GKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            G++ +A AV  + M+  G  P+  T+NTLI G CK   + +A ++  EM   G    V+
Sbjct: 366 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 425

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY  LI+  C +G+L+EA  + DEM   GL  N V  N LI+  CK + V+ A  +F D+
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           S +G  P + T+N+LI   CK  + E+A  +   ML  GV+ +  TYN LI    R G +
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    ++N+++  G     +TYN L+ ALC+ G  +K ++L ++M  M K    PN ++ 
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM--MSKGLN-PNNISC 602

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N+LI G C+ G ++ A   L +++ +GL P+  TY
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 226/455 (49%), Gaps = 33/455 (7%)

Query: 6   NSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLL 65
           N  I  + +++R H  +KL +     ++L+ F  ++    +L             H L  
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDR----MLLRGFTPNSFTYGVLM------------HGLCR 334

Query: 66  TGRLLHSLVVAKKYPK-----IRSFLHMFVKNGKFTSVSTIFH----ALSTCSDSLCRNS 116
            G++  + ++  K P        + ++ +V  G+      + H    ++    D    N+
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +I+ +    Y+ + +     E        G + +V++   L+    KEG+ E+   V  E
Sbjct: 395 LILGLCKKGYLVSAR-----ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  + + LN   +N +++ LCK  K+  A ++  DM S G  P + T+N LI G CK   
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK--- 506

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + K  +A  +++DM+  G++ N +T+NTLI  F +   +  A+K+  +M   G     +T
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI  LC  G +++ +AL ++MM+ GL PN ++ N LING C+   ++ A     D+ 
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL+P ++TYN+LI+  CK GR ++A  + + +   G+ PD  TYN LI+   +EG  +
Sbjct: 627 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
               +++  V++G     VT+ ILV    K+G  +
Sbjct: 687 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 232/450 (51%), Gaps = 31/450 (6%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           G+ T +      + +C  +    ++++D+L+      + P++ +E   +    G+  +V 
Sbjct: 163 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK----GISPTVY 218

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +   +++AL    + +    + K+M R     N   +  +++ L K G++N+   ++E+M
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEM 278

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
             +G  P V T+N  I G CK   + ++++A  +   M+  G  PN  T+  L+ G C+ 
Sbjct: 279 LLMGCIPDVNTFNDAIHGLCK---MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 335

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE-MMASGLKPNVVT 331
             +  A  +  ++ +      VV +N+LING    G+LDEA A+  E M++ G  P++ T
Sbjct: 336 GKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CKK  +  AR L +++  +G  P+VITY  LID +CKEGR+E+A  + + M 
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+  +   YNCLI+ L ++  V+   N+  ++ + G +  + T+N L+  LCK  K +
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L  +M     E    N +TYN LI  F ++G +++A  L+N++L +G   +  TY 
Sbjct: 512 EALGLYQDML---LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 568

Query: 512 ----------------IVREEMMEKGFIPD 525
                            + E+MM KG  P+
Sbjct: 569 GLIKALCRAGNIEKGLALFEDMMSKGLNPN 598



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 198/434 (45%), Gaps = 76/434 (17%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL- 215
           L+  L   G+F+ ++ +  +MK+  I      F  ++    +AG   +A+ ++ DM+ + 
Sbjct: 117 LIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVY 176

Query: 216 GVSPKVVTYNILID----GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
              P   +YN+++D    G C K           VF +M+  GI P   TF  ++   C 
Sbjct: 177 SCEPTFRSYNVVLDVLLAGNCPK-------VVPNVFYEMLSKGISPTVYTFGVVMKALCL 229

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + ++M  HG     + Y +LI+ L   G+++E + L +EM+  G  P+V T
Sbjct: 230 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNT 289

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY------------------------ 367
            N  I+G CK   + +A  L D +  +G +P+  TY                        
Sbjct: 290 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP 349

Query: 368 -------NTLIDAYCKEGRMEDAFA-MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                  NTLI+ Y   GR+++A A M  SML  G  PD+ TYN LI GL ++G +   R
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF------------------ 461
            +MNE+   G    ++TY IL+   CK+G+ ++A ++LDEM                   
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 462 --------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
                          M  +   P+I T+N LI G C+  K E+A GL  ++L +G+I N 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 508 TTYQIVREEMMEKG 521
            TY  +    + +G
Sbjct: 530 ITYNTLIHAFLRRG 543



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 167/353 (47%), Gaps = 14/353 (3%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
            D +  +++ L  AG+      ++  MK  G+  +   + +++  Y + G  G+   A  
Sbjct: 111 FDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQ---ATR 167

Query: 246 VFKDMVENGILPNEVTF---NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           +  DM   G+   E TF   N ++D             VF EM S GI+  V T+  ++ 
Sbjct: 168 LLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMK 225

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC+  ++D A AL  +M   G  PN +    LI+   K   V +   L +++   G  P
Sbjct: 226 ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIP 285

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V T+N  I   CK  R+ +A  + + ML RG  P+  TY  L+ GL R G V+  R ++
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           N++ N      +V +N L+      G+  +A +++ E   M      P+I TYN LI G 
Sbjct: 346 NKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE--SMLSVGCGPDIFTYNTLILGL 399

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           C+KG L  A  L+NE+  KG  PN  TY I+ +   ++G + +    +  +SG
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 23/427 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++  +L++AY    +              G+   +   N ++  L K GK E+     
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            E++ R ++ +  +F   + G  K GK+ +A+   ++M   G+ P    Y +LI+G+ K 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G    + +A ++F+ +   G+LP+  T +  I G  K+  +  A+KVF E+   G+   V
Sbjct: 592 G---NLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY+SLI+G C  G++++A  L DEM   G+ PN+   NAL++G CK   +++AR LFD 
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+GL P  +TY+T+ID YCK   + +AF++ + M  +GV P    YN L+ G  +EG+
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E   N+  E++  G  A  +++N L+   CK  K ++A  L  EM     ++  P+ VT
Sbjct: 769 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMI---AKQIMPDHVT 824

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMM 518
           Y  +I   C+ GK+E+AN L  E+ E+ LI +  TY                  + E+M+
Sbjct: 825 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884

Query: 519 EKGFIPD 525
            KG  PD
Sbjct: 885 AKGVKPD 891



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 239/461 (51%), Gaps = 44/461 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+  + K GK T  +  F  +      L  N+ +  +L+  + K          F+R  
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLH 605

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+   V +C+  +  L+K G+ ++   V+ E+K + +  ++ +++ +++G CK G++ 
Sbjct: 606 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA ++ ++M   G++P +  YN L+DG CK G I    +A  +F  M E G+ P+ VT++
Sbjct: 666 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI---QRARKLFDGMPEKGLEPDSVTYS 722

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+IDG+CK EN++ A  +F EM S G+      YN+L++G C +G +++A+ L  EM+  
Sbjct: 723 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G     ++ N LI+G+CK   +++A  LF ++  + + P  +TY T+ID +CK G+ME+A
Sbjct: 783 GF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 841

Query: 384 -----------------------------------FAMRNSMLDRGVLPDVSTYNCLIAG 408
                                              FA+   M+ +GV PD  TY  +I  
Sbjct: 842 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 901

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             +E N+     + +E+V  GM      +++L+ ALCK     +A  LLDEM ++  +  
Sbjct: 902 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK-- 959

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            P++   N L++ F + GK+++A  +   +   GL+P+ TT
Sbjct: 960 -PSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 208/403 (51%), Gaps = 22/403 (5%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           +  G+ GL  +  +   +   L +  +  + +  ++EM++  ++ + ++ + +++G  + 
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G +++   I + M S G+   ++TYN+LI G CK    GKM KA  + K MV  G  PN 
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK---FGKMEKAAEILKGMVTLGCKPNS 403

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            TF  LI+G+C++ N+  A+++ +EM    +    V+Y ++INGLC    L  A  L ++
Sbjct: 404 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 463

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  SGLKPNVV  + LI  +  +  +E+AR L D +S  G++P +  YN +I    K G+
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ME+A      +  RG+ PD  T+   I G S+ G +       +E++++G+      Y +
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+    K G   +A+S+   +  +      P++ T +  I G  + G++++A  + +EL 
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHAL---GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 500 EKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           EKGL+P+  TY                  + +EM  KG  P+I
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 247/498 (49%), Gaps = 9/498 (1%)

Query: 13  TELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           T ++ +H  SKL       V+ Q  N   DP  +L +F WS  ++     L     L   
Sbjct: 58  TIMVSSHIPSKLNPDVIRAVLHQ--NQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQ 115

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L  ++ +      L   ++   ++S S +   L    +    + ++ D+L+ +Y +    
Sbjct: 116 LCNSELFGLANGVLTQMIRT-PYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGML 174

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                 F  A +  +  S++ CN LL+ L+K G  E    VY  M   ++  ++ ++ ++
Sbjct: 175 DEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYL 234

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +  LCK G L  A  ++ +M   G++P    Y+++I+G C+   +G + +A  + + M E
Sbjct: 235 VGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ---VGDIDEAVELKRSMGE 291

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++PN  T+  +  G C+ + ++ A   FEEM   G+       ++LI+G   +G +DE
Sbjct: 292 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 351

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            + ++D M++ G+  N++T N LI+G CK   +EKA  +   +   G  P+  T+  LI+
Sbjct: 352 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YC+E  M  A  + + M  R ++P   +Y  +I GL    ++     ++ ++  +G++ 
Sbjct: 412 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 471

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +V Y+IL+ A   +G+ ++A  LLD    M      P+I  YN +I    + GK+E+A+
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLD---GMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 493 GLLNELLEKGLIPNQTTY 510
             L E+  +GL P+  T+
Sbjct: 529 TYLLEIQGRGLKPDAVTF 546



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 211/432 (48%), Gaps = 9/432 (2%)

Query: 68   RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
            R LH+L V        +F+H  +KNG+      +F  L      L  +      L+  + 
Sbjct: 602  RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK--EKGLVPDVFTYSSLISGFC 659

Query: 128  KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            K  +    FE        G+  ++   N L+  L K G  +    ++  M  + +E +  
Sbjct: 660  KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719

Query: 188  SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +++ +++G CK+  + +A  +  +M S GV P    YN L+ G CK+G    M KA  +F
Sbjct: 720  TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLF 776

Query: 248  KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            ++M++ G     ++FNTLIDG+CK   I  A ++F+EM +  I    VTY ++I+  C  
Sbjct: 777  REMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835

Query: 308  GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            GK++EA  L  EM    L  + VT  +L+ G+ K     +   LF+ +  +G+ P  +TY
Sbjct: 836  GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 895

Query: 368  NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
              +I A+CKE  + +AF +R+ ++ +G+L   + ++ LI  L +  ++     +++E+  
Sbjct: 896  GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955

Query: 428  NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             G++  L   N LV +  + GK  +A  + + +  +      P+  T   L+ G      
Sbjct: 956  LGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSL---GLVPDTTTLIDLVNGNLNDTD 1012

Query: 488  LEDANGLLNELL 499
             EDA  L+ +L+
Sbjct: 1013 SEDARNLIKQLV 1024



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 21/192 (10%)

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           VLF   +  G SP  + ++ LID+Y + G +++A  +     +  +L  +   N L+  L
Sbjct: 146 VLFWFRNYGGSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDL 203

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G +E    + N +++  M   + TY  LVGALCK G  + A  +L EM   +++   
Sbjct: 204 LKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEM---DEKGLN 260

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR--------------- 514
           PN   Y+++I+G CQ G +++A  L   + EKGL+PN  TY I+                
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320

Query: 515 -EEMMEKGFIPD 525
            EEM + G  PD
Sbjct: 321 FEEMQKTGLKPD 332


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 226/443 (51%), Gaps = 13/443 (2%)

Query: 85  FLHMFVKNGKFTSVSTIF--HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            L  FV+  K      +F  H    CS     +SI    L+  + K       +      
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSP----DSITYSTLINGFCKARDFQQAYRLLDEM 59

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              G+       N +++ L   G+ +     Y++M+R     ++ ++  +++ LCK+ ++
Sbjct: 60  EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARI 118

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + AS I+EDM   G +P VVTYN LI+G+CK   +G M +A  +F  M+EN   P+  T+
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCK---LGNMDEAVVLFNQMLENSCSPDVFTY 175

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LIDG+CK E      K+ +EM  +G     +TYN+L++ L   GK  +A  L   M+ 
Sbjct: 176 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 235

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
              KP+  T N +I+ FCK   ++ A  LF  ++++G  P + TYN +I   C+  R++D
Sbjct: 236 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 295

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M + G  PDV TYN +++GL +   V+    +   L N G    +VT + L+ 
Sbjct: 296 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK  +   A  LL EM   E+    P++V Y +LI GFC+  +L+ +    +E+L+KG
Sbjct: 356 GLCKSRRLDDAEKLLREM---ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 412

Query: 503 LIPNQTTYQIVREEMMEKGFIPD 525
            +P   TY IV +++ +   + D
Sbjct: 413 CVPTVITYSIVIDKLCKSARVRD 435



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 177/322 (54%), Gaps = 9/322 (2%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N +L+   +  K  +A D+ ++      SP  +TY+ LI+G+CK     + Y+   +  +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYR---LLDE 58

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M + GI+P+   +NT+I G C +  + +A+  + +M  H  A  V+TY  L++ LC   +
Sbjct: 59  MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSAR 117

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + +A  + ++M+ +G  PNVVT N LINGFCK   +++A VLF+ + E   SP V TYN 
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LID YCK+ R +D   +   M+  G  P+  TYN L+  L + G      N+   ++   
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKL 488
            +    T+N+++   CK G+    + L  E+F++  ++   P+I TYN++I G C+  ++
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQ----LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 293

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           +DA  LL  + E G  P+  TY
Sbjct: 294 DDARQLLERMTEAGCPPDVVTY 315



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 181/338 (53%), Gaps = 7/338 (2%)

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           CN LL A V++ K ++   ++K         +  +++ ++NG CKA    +A  ++++M+
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G+ P    YN +I G C  G +     A   ++DM +    P+ +T+  L+D  CK  
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDS---ALVHYRDM-QRHCAPSVITYTILVDALCKSA 116

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            IS A  + E+M   G A  VVTYN+LING C  G +DEAV L ++M+ +   P+V T N
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+G+CK++  +    L  ++ + G  P+ ITYNTL+D+  K G+  DAF +   ML R
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
              P   T+N +I    + G ++    +   + + G    + TYNI++   C+  +   A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             LL+   +M +    P++VTYN ++ G C+  ++++A
Sbjct: 297 RQLLE---RMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 38/348 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV++   L+ AL K  +  D   + ++M       N+ ++N ++NG CK G +++A  + 
Sbjct: 101 SVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLF 160

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL---- 265
             M     SP V TYNILIDGYCK+    +      + ++MV+ G  PN +T+NTL    
Sbjct: 161 NQMLENSCSPDVFTYNILIDGYCKQE---RPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217

Query: 266 -------------------------------IDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                                          ID FCK   +  A ++F+ M   G    +
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN +I+G C   ++D+A  L + M  +G  P+VVT N++++G CK   V++A  +++ 
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G    V+T +TLID  CK  R++DA  +   M   G  PDV  Y  LI G  +   
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           ++      +E+++ G    ++TY+I++  LCK  + +    LL  M +
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 150/280 (53%), Gaps = 3/280 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V + N L+    K+ + +D   + +EM +   E N  ++N +++ L K+GK   A ++ +
Sbjct: 172 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 231

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M      P   T+N++ID +CK G +   Y+   +F+ M + G LP+  T+N +I G C
Sbjct: 232 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE---LFQLMTDRGCLPDIYTYNIMISGAC 288

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   I  A ++ E M   G    VVTYNS+++GLC   ++DEA  + + +   G   +VV
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T + LI+G CK + ++ A  L  ++   G +P V+ Y  LI  +CK  +++ + A  + M
Sbjct: 349 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 408

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           LD+G +P V TY+ +I  L +   V     ++  ++  G+
Sbjct: 409 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 4/224 (1%)

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N L++      K  EA  L    +     P+ +T + LINGFCK +  ++A  L D++ +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G+ P    YNT+I   C  GR++ A      M  R   P V TY  L+  L +   +  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I+ +++  G    +VTYN L+   CK G   +AV L ++M    +    P++ TYN+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML---ENSCSPDVFTYNI 177

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           LI G+C++ + +D   LL E+++ G  PN  TY  + + +++ G
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 212/405 (52%), Gaps = 24/405 (5%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +V S N L+  L +    +    V+ +M +  I+ ++ +F  ++NG+C  GK+  
Sbjct: 122 FGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKV 181

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++  +M   G  P V++YN LI+G C  G       A  VFK M +NG  PN VT+NT
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM---AVHVFKKMEQNGCKPNVVTYNT 238

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CKD  ++ AM    EM   GI    +TYNS+++GLC  G+L+EA  L   M  +G
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            KP+VVT N +I+   K +LV  A     ++ +QG+ P V+TY T++   C  G++ +A 
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +G  PDV  YN +I  L ++  V      ++E+V+ G+    VTY+ ++   
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G+  +A  L  EM         PN +T+++L+ G CQ+G + +A  +   + EKG+ 
Sbjct: 419 CNLGQLDEATQLFKEMV---GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
           PN  TY                  V E M+ KG  PD+  H YNI
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDL--HSYNI 518



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 228/414 (55%), Gaps = 13/414 (3%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++  NSI+  +  L  +           FKR    G K  V++ N ++ +L K+    D
Sbjct: 267 DAITYNSIVHGLCCLGQLNE-----ATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVND 321

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                 EM  + I  ++ ++  +L+GLC  G+LN+A  + + M+  G  P VV YN +ID
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK   +     A     +MV+ GI PN VT++T++ GFC    +  A ++F+EM    
Sbjct: 382 SLCKDRLVND---AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +    +T++ L++GLC +G + EA  + + M   G++PN+ T NAL+NG+C +  + +AR
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F+ +  +G +P + +YN LI+ YC   RM+ A A+   M  + + P+  TYN ++ GL
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G +   + +  ++ ++GM   L+TY+IL+  LCK G   +A+ L    FK  KEKK 
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKL----FKSMKEKKL 614

Query: 470 -PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            P+I+ Y +LI+G    GKLE A GL ++L   G+ P   TY ++ + ++++G 
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGL 668



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 214/391 (54%), Gaps = 6/391 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R      + S++   + L ++ K  ++  V Y+  +M    +   + S N ++N
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+   ++ A  +   M  LG+ P V+T+  LI+G C +   GK+  A  ++ +MV +G
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNE---GKIKVAVELYNEMVRSG 193

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ +++NTLI+G C   N + A+ VF++M  +G    VVTYN++I+ LC D  +++A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
               EM+  G+ P+ +T N++++G C    + +A  LF  + + G  P V+TYN +ID+ 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K+  + DA    + M+D+G+ PDV TY  ++ GL   G +     +  ++   G +  +
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V YN ++ +LCKD     A+  L EM         PN VTY+ ++ GFC  G+L++A  L
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMV---DRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             E++ + ++PN  T+ I+ + + ++G + +
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 214/391 (54%), Gaps = 6/391 (1%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           ++    FK+    G K +V++ N ++ +L K+    D      EM  R I  +  ++N +
Sbjct: 215 NMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI 274

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLC  G+LN+A+ + + M+  G  P VVTYNI+ID   K   +     A     +MV+
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN---DAADFLSEMVD 331

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI P+ VT+ T++ G C    ++ A+++F++M   G    VV YN++I+ LC D  +++
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND 391

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+    EM+  G+ PN VT + +++GFC    +++A  LF ++  + + P+ +T++ L+D
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVD 451

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C+EG + +A  +  +M ++GV P++ TYN L+ G      +   R +   +V  G   
Sbjct: 452 GLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAP 511

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L +YNIL+   C   +  KA +LL +   M  +K  PN VTYN ++KG C  G+L DA 
Sbjct: 512 DLHSYNILINGYCNSRRMDKAKALLTQ---MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            L  ++   G++P   TY I+   + + G +
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 221/416 (53%), Gaps = 12/416 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S +H     G+    + +F  +    C   +   +IIID L     K+   +   +    
Sbjct: 273 SIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL----YKDRLVNDAADFLSE 328

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             D G+   V++   +L  L   G+  +   ++K+M+++  + ++ ++N +++ LCK   
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +N A + + +M   G+ P  VTY+ ++ G+C    +G++ +A  +FK+MV   ++PN +T
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN---LGQLDEATQLFKEMVGRNVMPNTLT 445

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F+ L+DG C++  +S A  VFE M   G+   + TYN+L+NG C+  K++EA  + + M+
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  P++ + N LING+C  + ++KA+ L   +S + L+P+ +TYNT++   C  GR+ 
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLL 565

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M   G+LP + TY+ L+ GL + G+++    +   +    +   ++ Y IL+
Sbjct: 566 DAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             +   GK + A  L     K+  +   P   TYNV+IKG  ++G  ++A  L  +
Sbjct: 626 EGMFIGGKLEVAKGLFS---KLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 189/341 (55%), Gaps = 13/341 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK+    G K  V++ N ++ +L K+    D      EM  R I  N  +++ +L+G C 
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+L++A+ + ++M    V P  +T++IL+DG C++G + +   A  VF+ M E G+ PN
Sbjct: 421 LGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE---ARWVFETMTEKGVEPN 477

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N L++G+C    ++ A KVFE M   G A  + +YN LING C   ++D+A AL  
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLT 537

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M    L PN VT N ++ G C    +  A+ LF  +   G+ P+++TY+ L++  CK G
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHG 597

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++A  +  SM ++ + PD+  Y  LI G+   G +E  + + ++L  +G++    TYN
Sbjct: 598 HLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYN 657

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +++  L K+G S +A  L          +KW  ++ +NV+I
Sbjct: 658 VMIKGLLKEGLSDEAYELF---------RKW-KMMKHNVII 688



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           ++  A+  F  M        +V +   +  +    +    V L ++M   G+   V + N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LIN  C+   V+ A  ++  + + G+ P VIT+ TLI+  C EG+++ A  + N M+  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  PDV +YN LI GL   GN     ++  ++  NG +  +VTYN ++ +LCKD     A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +  L EM         P+ +TYN ++ G C  G+L +A  L   + + G  P+  TY I+
Sbjct: 253 MDFLSEMV---GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 514 RE----------------EMMEKGFIPDI 526
            +                EM+++G  PD+
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDV 338



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 63/120 (52%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E FK+    G+  ++++ + LL  L K G  ++   ++K MK +++E ++  +  ++ G+
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGM 628

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
              GKL  A  +   + + G+ P   TYN++I G  K+G   + Y+    +K M  N I+
Sbjct: 629 FIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVII 688


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 260/564 (46%), Gaps = 90/564 (15%)

Query: 2   FCSANSTIEDITE--------------LIRNHHWSK---LKNTDP---NTVILQLFNSDA 41
           FCS +  I ++ E              ++   +W K   LK+  P    + +  LF+ D 
Sbjct: 42  FCSVSPLIRNLPEDESDPTSVPHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFSLDL 101

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
           DP   L +  W ++  R  HS+                    S L + + NG    V  I
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVY----------------SYASLLTLLINNGYVGVVFKI 145

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC-NQLLRA 160
              +    DS+     ++D+      + M     FE       Y L   ++ C N LL +
Sbjct: 146 RLLMIKSCDSVADTLFVLDL-----CRKMNKDESFEL-----KYKL---IIGCYNTLLNS 192

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L + G  ++++ VY EM   ++  N+ ++N ++NG CK G + +A+  +  +   G+ P 
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPD 252

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
             TY  LI GYC++  +   +K   VFK+M   G   NEV +  LI G C +  I  AM 
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFK---VFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMD 309

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F +M        V TY  LI  LC   +  EA+ L  EM   G+KPN+ T   LI+  C
Sbjct: 310 LFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLC 369

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF---------------- 384
            +  +EKAR L   + E+GL P+VITYN LI+ YCK G +EDA                 
Sbjct: 370 SQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTR 429

Query: 385 ------------------AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
                              + N ML+R VLPDV TYN LI G  R GN +    +++ + 
Sbjct: 430 TYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+     TY  ++ +LCK  + ++A  L D    +E++   PN+V Y  LI G+C+ G
Sbjct: 490 DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS---LEQKDVIPNVVMYTALIDGYCKAG 546

Query: 487 KLEDANGLLNELLEKGLIPNQTTY 510
           K+ +A+ +L ++L K  +PN  T+
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTF 570



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 206/397 (51%), Gaps = 7/397 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN +    L+       +     + F +  D     +V +   L++AL    +  +   +
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            KEM+ + I+ N+ ++  +++ LC   KL KA +++  M   G+ P V+TYN LI+GYCK
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCK 405

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G I     A  V + M    + PN  T+N LI G+CK  N+  AM V  +M    +   
Sbjct: 406 RGMIE---DALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPD 461

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTYNSLI+G C  G  D A  L   M   GL P+  T  ++I+  CK K VE+A  LFD
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + ++ + P+V+ Y  LID YCK G++ +A  M   ML +  LP+  T+N LI GL  +G
Sbjct: 522 SLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDG 581

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    +  ++V   ++  + T  IL+  L KDG    A     +M     +   P+  
Sbjct: 582 KLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK---PDAH 638

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           TY   I+ +C++G+L+DA  ++ ++ E G+ P+  TY
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 206/383 (53%), Gaps = 7/383 (1%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           K   + G+K ++ +   L+ +L  + K E    +  +M  + +  N+ ++N ++NG CK 
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G +  A D++E M+S  + P   TYN LI GYCK+     ++KA  V   M+E  +LP+ 
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN----VHKAMGVLNKMLERKVLPDV 462

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+N+LIDG C+  N  +A ++   M   G+     TY S+I+ LC   +++EA  L D 
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           +    + PNVV   ALI+G+CK   V +A ++ + +  +   P+ +T+N LI   C +G+
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  +   M+   + P VST   LI  L ++G+ +       +++++G +    TY  
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            +   C++G+ + A    D + KM++    P++ TY+ LIKG+   G+   A  +L  + 
Sbjct: 643 FIQTYCREGRLQDAE---DMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699

Query: 500 EKGLIPNQTTYQIVREEMMEKGF 522
           + G  P+Q T+  + + ++E  +
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKY 722



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L++ Y +       F+ FK     G + + ++   L+  L  E + ++   ++ +MK   
Sbjct: 259 LIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD 318

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               + ++  ++  LC + + ++A +++++M+  G+ P + TY +LID  C +    K+ 
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC---KLE 375

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA  +   M+E G++PN +T+N LI+G+CK   I  A+ V E M S  +     TYN LI
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C    + +A+ + ++M+   + P+VVT N+LI+G C+    + A  L   ++++GL 
Sbjct: 436 KGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY ++ID+ CK  R+E+A  + +S+  + V+P+V  Y  LI G  + G V     +
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + ++++       +T+N L+  LC DGK K+A  L ++M K++ +   P + T  +LI  
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ---PTVSTDTILIHR 611

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             + G  + A     ++L  G  P+  TY    +    +G + D E
Sbjct: 612 LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 187/413 (45%), Gaps = 49/413 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  +V++ N L+    K G  ED   V + M+ R +  N  ++N ++ G CK   ++KA
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKA 446

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----------------------- 242
             ++  M    V P VVTYN LIDG C+ G     Y+                       
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506

Query: 243 ---------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                    A  +F  + +  ++PN V +  LIDG+CK   ++ A  + E+M S      
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            +T+N+LI+GLC DGKL EA  L ++M+   L+P V T   LI+   K    + A   F 
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +   G  P   TY T I  YC+EGR++DA  M   M + GV PD+ TY+ LI G    G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALC--KDGKSK---KAVSLLDEMF------- 461
                  ++  + + G      T+  L+  L   K GK K     V ++  M        
Sbjct: 687 RTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE 746

Query: 462 ---KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK-GLIPNQTTY 510
              KM +    PN  +Y  L+ G C+ G L  A  + + + +K G+ P++  +
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 227/526 (43%), Gaps = 78/526 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLA 125
           L+ SL    K  K R  L   ++ G   +V T ++AL    +  C+  +I   +D++ L 
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVIT-YNALI---NGYCKRGMIEDALDVVELM 419

Query: 126 YVKNMKP-----------------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
             +N++P                 H       +  +  +   V++ N L+    + G F+
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M  R +  +  ++  +++ LCK+ ++ +A D+ + ++   V P VV Y  LI
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI 539

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK G   K+ +A  + + M+    LPN +TFN LI G C D  +  A  + E+M   
Sbjct: 540 DGYCKAG---KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI 596

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
            +   V T   LI+ L  DG  D A     +M++SG KP+  T    I  +C++  ++ A
Sbjct: 597 DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +   + E G+SP + TY++LI  Y   GR   AF +   M D G  P   T+  LI  
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716

Query: 409 L--SREGNVEG----------------VRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L   + G V+G                V  ++ ++V +G+     +Y  L+  +C+ G  
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776

Query: 451 KKAVSLLDEM--------------------FKMEKEKK-------------WPNIVTYNV 477
           + A  + D M                     K+EK  +              P + +  +
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKI 836

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           LI    +KG+ E    +   LL+ G   ++  ++I+ + + ++G +
Sbjct: 837 LICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLV 882



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 3/229 (1%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L+N L   G +DE   +  EM+   + PN+ T N ++NG+CK   VE+A      I 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E GL P   TY +LI  YC+   ++ AF +   M  +G   +   Y  LI GL  E  ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++  ++ ++     + TY +L+ ALC   +  +A++L+ EM   E++   PNI TY 
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM---EEKGIKPNIHTYT 362

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           VLI   C + KLE A  LL ++LEKGL+PN  TY  +     ++G I D
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 22/314 (7%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+ +V +   L+  L+K+G F+     +++M     + +  ++   +   C+ G+L  A 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D++  MK  GVSP + TY+ LI GY   G +G+   A  V K M + G  P++ TF +LI
Sbjct: 658 DMVAKMKENGVSPDLFTYSSLIKGY---GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714

Query: 267 ---------------DGFCKDENI---SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
                           G C   N+      +++ E+M  HG+     +Y  L+ G+C  G
Sbjct: 715 KHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIG 774

Query: 309 KLDEAVALRDEMMA-SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            L  A  + D M    G+ P+ +  NAL++  CK +   +A  + DD+   G  P + + 
Sbjct: 775 NLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESC 834

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             LI    K+G  E   ++  ++L  G   D   +  +I G+ ++G VE    + N +  
Sbjct: 835 KILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 428 NGMRAGLVTYNILV 441
           NG      TY++L+
Sbjct: 895 NGCTFSSQTYSLLI 908



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 163/350 (46%), Gaps = 27/350 (7%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+ N L+  L  +GK ++   + ++M +  ++  + +   +++ L K G  + A    + 
Sbjct: 568 LTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQ 627

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S G  P   TY   I  YC++G   ++  A+ +   M ENG+ P+  T+++LI G+  
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREG---RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLIN---------------GLCVDG---KLDEA 313
               ++A  V + M   G      T+ SLI                G+CV     + D  
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPSVITYNTLID 372
           V L ++M+  G+ PN  +   L+ G C+   +  A  +FD + + +G+SPS + +N L+ 
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK  +  +A  + + M+  G LP + +   LI  L ++G  E   ++   L+  G   
Sbjct: 805 CCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYD 864

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKG 481
             + + I++  + K G     V    E+F  MEK     +  TY++LI+G
Sbjct: 865 DELAWKIIIDGVGKQG----LVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 258/557 (46%), Gaps = 83/557 (14%)

Query: 45  LILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           L L++  W  K+  L   H   +     H LV A+ Y   +S L    + G      +IF
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG--IGSKSIF 149

Query: 103 HALSTCSDSLCRNSI--IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
            AL   +  LC NSI  + D+L+  Y+K        E F+  G  G K SV +CN +L +
Sbjct: 150 GALMD-TYPLC-NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           +VK+ + E V  +++EM  + I  N+ +FN ++NGLC  G L KA ++++ M+  G  P 
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 267

Query: 221 VVTYNILIDGYCKKG---------------GI-----------------GKMYKADAVFK 248
           +VTYN L++ YCKKG               GI                  +  KA  + K
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M +  I PNEVT+NTLI+GF K+  I  A +VF EM    ++   VTYN+LI G C  G
Sbjct: 328 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387

Query: 309 KLDEAVALRDEMMASGLKPNV-----------------------VTSNALINGFCKKKLV 345
             +EA+ L D M A+GL+ N                         T N L++  C+   +
Sbjct: 388 DFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 447

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A      +S  GL P+ ITY+ +I+ Y   G   +AF+  + M+  G  P   TY  L
Sbjct: 448 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 507

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + GL + GN+   +  +N L         V YN L+   CK G   +AV+L D   KM +
Sbjct: 508 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD---KMVQ 564

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPNQTTYQIVR---------- 514
               P+  TY+ L+ G C+KGK   A  L    + +G L PN   Y  +           
Sbjct: 565 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 624

Query: 515 ------EEMMEKGFIPD 525
                 EEMM+KG  PD
Sbjct: 625 AAFYFFEEMMKKGTCPD 641



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 204/450 (45%), Gaps = 45/450 (10%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+  +VK  K  +  + F     + L  + ++ N L+      G FE+   + 
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396

Query: 175 KEMKRRRIELN---------------------LDSF--NFVLNGLCKAGKLNKASDIMED 211
             M+   + LN                      D F  N +++ LC+ GKL +A   +  
Sbjct: 397 DHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 456

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M  +G+ P  +TY+ +I+GY   G IG    A + F DM++ G  P+  T+ +L+ G CK
Sbjct: 457 MSRIGLVPNSITYDCIINGY---GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 513

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A K    +     A   V YN+L+   C  G L EAVAL D+M+ + + P+  T
Sbjct: 514 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 573

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            ++L+ G C+K     A  LF     +G L P+ + Y  L+D   K G  + AF     M
Sbjct: 574 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 633

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G  PD   +N +I   SR G +    +  + +   G+   L TYNIL+    K    
Sbjct: 634 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 693

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG------------KLEDANGLLNEL 498
            + +SL   M    +E  +P+ +T++ LI G  + G             +E++  +L+E+
Sbjct: 694 LRYLSLYSTMM---REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEM 750

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           LE G+IP    Y  +   M   G   DI+G
Sbjct: 751 LENGVIPKHAQYITLINGMCRVG---DIQG 777



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 197/447 (44%), Gaps = 48/447 (10%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  NSI  D ++  Y     P   F  F      G   S  +   LL+ L K G   + +
Sbjct: 462 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 521

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
                +      ++   +N +L   CK+G L++A  + + M    V P   TY+ L+ G 
Sbjct: 522 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 581

Query: 232 CKKGGIGKMYKADAVFKDMVENGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           C+KG   K   A  +F   +  G L PN V +  L+DG  K  +  AA   FEEM   G 
Sbjct: 582 CRKG---KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 638

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               V +N++I+     G++ +A      M   G+ PN+ T N L++GF KK+ + +   
Sbjct: 639 CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLS 698

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGR------------MEDAFAMRNSMLDRGVLPD 398
           L+  +  +G+ P  +T+++LI    K G             ME++  + + ML+ GV+P 
Sbjct: 699 LYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPK 758

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
            + Y  LI G+ R G+++G   + +E+   G  +  V  + +V  L   GK++ A+ +LD
Sbjct: 759 HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 818

Query: 459 EMFKME----------------KEKKWP----------------NIVTYNVLIKGFCQKG 486
            M +M                 ++ K                  ++V YNVLI G C  G
Sbjct: 819 HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANG 878

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
               A  L  E+  + L PN TTY ++
Sbjct: 879 DSAAAFELYEEMRHRDLCPNITTYAVL 905



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 186/416 (44%), Gaps = 19/416 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S++ + L+    K+   H     F +     +     + + LL  L ++GK      ++
Sbjct: 535 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 594

Query: 175 -KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
              M R  +  N   +  +++GL KAG    A    E+M   G  P  V +N +ID   +
Sbjct: 595 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 654

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G   +M KA+  F  M   G+ PN  T+N L+ GF K + +   + ++  M   GI   
Sbjct: 655 RG---QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 711

Query: 294 VVTYNSLINGLCVDGK------------LDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            +T++SLI GL   G             ++E+  +  EM+ +G+ P       LING C+
Sbjct: 712 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCR 771

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              ++ A  L D++   G     +  + ++      G+ EDA  + + ML   +LP ++T
Sbjct: 772 VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 831

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  L+    R+  +     +   +   G++  +V YN+L+  +C +G S  A  L +EM 
Sbjct: 832 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM- 890

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
                   PNI TY VL+        L     LL +L E+GLI    + Q + +E+
Sbjct: 891 --RHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKEL 944


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 213/368 (57%), Gaps = 7/368 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKE-MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+ ++ + V  E M       ++ ++N ++ GLCK G L  A ++M +M+
Sbjct: 375 NTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ 434

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G  P V+TY ILID +CK+G   ++ +A  V  +M   G+  N V +N LI   CKDE
Sbjct: 435 IKGCEPNVITYTILIDRFCKEG---RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A+ +F +M S G    + T+NSLI GLC   K +EA+ L  +M+  G+  N +T N
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+ F ++  +++A  L +D+  +G     ITYN LI A C+ G +E   A+   M+ +
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P+  + N LI GL R GN++     + ++++ G+   +VTYN L+  LCK G++++A
Sbjct: 612 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 671

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++L D   K++ E   P+ +TYN LI   C++G  +DA+ LL+  ++ G IPN+ T+ I+
Sbjct: 672 LNLFD---KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728

Query: 514 REEMMEKG 521
               +++G
Sbjct: 729 VSNFIKEG 736



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 211/399 (52%), Gaps = 11/399 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K ++ H   +   R    G   +  +   L+  L + GK ++   +  ++    + L   
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL--- 373

Query: 188 SFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            FN ++NG    G+L++A  +M E M S+G  P + TYN LI G CKKG    +  A  +
Sbjct: 374 -FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG---YLVSAREL 429

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +M   G  PN +T+  LID FCK+  +  A  V +EM   G+A   V YN LI+ LC 
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D K+ +A+ +  +M + G KP++ T N+LI G CK    E+A  L+ D+  +G+  + IT
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 549

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI A+ + G M++A  + N ML RG   D  TYN LI  L R GN+E    +  +++
Sbjct: 550 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+    ++ NIL+  LC+ G  + A+  L +M         P+IVTYN LI G C+ G
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH---RGLTPDIVTYNSLINGLCKTG 666

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + ++A  L ++L  +G+ P+  TY  +     ++G   D
Sbjct: 667 RAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 705



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 218/409 (53%), Gaps = 29/409 (7%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G   + +    L+ AL K G+  +V  + +EM       ++++FN  ++GLCK  ++++
Sbjct: 264 HGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHE 323

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+ +++ M   G +P   TY +L+ G C+   +GK+ +A  +  + V N   PN V FNT
Sbjct: 324 AAKLVDRMLLRGFTPNSFTYGVLMHGLCR---MGKVDEARMLL-NKVPN---PNVVLFNT 376

Query: 265 LIDGFCKDENISAAMKVFEE-MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           LI+G+     +  A  V  E M S G    + TYN+LI GLC  G L  A  L +EM   
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G +PNV+T   LI+ FCK+  +E+AR + D++S +GL+ + + YN LI A CK+ +++DA
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   M  +G  PD+ T+N LI GL +    E    +  +++  G+ A  +TYN L+ A
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             + G  ++A+ L+++M      +  P + +TYN LIK  C+ G +E    L  +++ KG
Sbjct: 557 FLRRGAMQEALKLVNDMLF----RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 503 LIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
           L PN  +  I+                  +M+ +G  PDI  +   I+G
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 661



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 205/400 (51%), Gaps = 17/400 (4%)

Query: 61  HSLLLTGRLLHSLVVAKKYPK-----IRSFLHMFVKNGKFTSVSTIFH----ALSTCSDS 111
           H L   G++  + ++  K P        + ++ +V  G+      + H    ++    D 
Sbjct: 348 HGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 407

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
              N++I+ +    Y+ + +     E        G + +V++   L+    KEG+ E+  
Sbjct: 408 FTYNTLILGLCKKGYLVSAR-----ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 462

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V  EM  + + LN   +N +++ LCK  K+  A ++  DM S G  P + T+N LI G 
Sbjct: 463 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   + K  +A  +++DM+  G++ N +T+NTLI  F +   +  A+K+  +M   G  
Sbjct: 523 CK---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 579

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +TYN LI  LC  G +++ +AL ++MM+ GL PN ++ N LING C+   ++ A   
Sbjct: 580 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
             D+  +GL+P ++TYN+LI+  CK GR ++A  + + +   G+ PD  TYN LI+   +
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 699

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           EG  +    +++  V++G     VT+ ILV    K+G  +
Sbjct: 700 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 232/450 (51%), Gaps = 31/450 (6%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           G+ T +      + +C  +    ++++D+L+      + P++ +E   +    G+  +V 
Sbjct: 181 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK----GISPTVY 236

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +   +++AL    + +    + K+M R     N   +  +++ L K G++N+   ++E+M
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
             +G  P V T+N  I G CK   + ++++A  +   M+  G  PN  T+  L+ G C+ 
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCK---MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 353

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE-MMASGLKPNVVT 331
             +  A  +  ++ +      VV +N+LING    G+LDEA A+  E M++ G  P++ T
Sbjct: 354 GKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CKK  +  AR L +++  +G  P+VITY  LID +CKEGR+E+A  + + M 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+  +   YNCLI+ L ++  V+   N+  ++ + G +  + T+N L+  LCK  K +
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L  +M     E    N +TYN LI  F ++G +++A  L+N++L +G   +  TY 
Sbjct: 530 EALGLYQDML---LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 586

Query: 512 ----------------IVREEMMEKGFIPD 525
                            + E+MM KG  P+
Sbjct: 587 GLIKALCRAGNIEKGLALFEDMMSKGLNPN 616



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 197/434 (45%), Gaps = 76/434 (17%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL- 215
           L+  L   G+F+  + +  +MK+  I      F  ++    +AG   +A+ ++ DM+ + 
Sbjct: 135 LIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVY 194

Query: 216 GVSPKVVTYNILID----GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
              P   +YN+++D    G C K           VF +M+  GI P   TF  ++   C 
Sbjct: 195 SCEPTFRSYNVVLDVLLAGNCPK-------VVPNVFYEMLSKGISPTVYTFGVVMKALCL 247

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + ++M  HG     + Y +LI+ L   G+++E + L +EM+  G  P+V T
Sbjct: 248 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNT 307

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY------------------------ 367
            N  I+G CK   + +A  L D +  +G +P+  TY                        
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP 367

Query: 368 -------NTLIDAYCKEGRMEDAFA-MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                  NTLI+ Y   GR+++A A M  SML  G  PD+ TYN LI GL ++G +   R
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF------------------ 461
            +MNE+   G    ++TY IL+   CK+G+ ++A ++LDEM                   
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 462 --------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
                          M  +   P+I T+N LI G C+  K E+A GL  ++L +G+I N 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 508 TTYQIVREEMMEKG 521
            TY  +    + +G
Sbjct: 548 ITYNTLIHAFLRRG 561



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 167/353 (47%), Gaps = 14/353 (3%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
            D +  +++ L  AG+      ++  MK  G+  +   + +++  Y + G  G+   A  
Sbjct: 129 FDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQ---ATR 185

Query: 246 VFKDMVENGILPNEVTF---NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           +  DM   G+   E TF   N ++D             VF EM S GI+  V T+  ++ 
Sbjct: 186 LLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMK 243

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC+  ++D A AL  +M   G  PN +    LI+   K   V +   L +++   G  P
Sbjct: 244 ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIP 303

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V T+N  I   CK  R+ +A  + + ML RG  P+  TY  L+ GL R G V+  R ++
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           N++ N      +V +N L+      G+  +A +++ E   M      P+I TYN LI G 
Sbjct: 364 NKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE--SMLSVGCGPDIFTYNTLILGL 417

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           C+KG L  A  L+NE+  KG  PN  TY I+ +   ++G + +    +  +SG
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 221/412 (53%), Gaps = 20/412 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LCRN  + +              GFE +      G+  +  +   L+R L   GKF +
Sbjct: 193 DCLCRNGFVDE--------------GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLE 238

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +  EM RR +++++  F  +++GLCK G L +A ++ ++M + G  P +VT   L+ 
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           GYC KG +     A  +F  + E G   +  T+N  I G+CK   +  A++VF+EM   G
Sbjct: 299 GYCLKGNVDM---ARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG 355

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +VTYNSLI+ LC  G++  A  +   M  SGL P++VT   L++G CK K +++A 
Sbjct: 356 VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI 415

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           +LF+ + E GL+P V +Y  LI   C   RM +A  +   M  + ++P + TY+CLI GL
Sbjct: 416 LLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            R G +     ++NE+   G     +TY+IL+ AL K     +AV L ++M K   E   
Sbjct: 476 CRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE--- 532

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           P+++ Y ++I G+C+  ++++A  L  E+  K L+P+  TY I+   + + G
Sbjct: 533 PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 223/464 (48%), Gaps = 64/464 (13%)

Query: 133 HLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           HLG     F  F +    G     ++ N +L+ L   G        + E+      LN  
Sbjct: 84  HLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEV 143

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMK--------SLGVSPKVVTYNILIDGYCKKGGIGK 239
           S+  ++NGLC+ G++N+A +++  ++           V   VV Y+I+ID  C+ G + +
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            ++    + +M+ NG+ PNE T+ +LI G C          + +EM   G+   V  +  
Sbjct: 204 GFE---FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GLC +G L EA  + DEM+  G +PN+VT  AL+ G+C K  V+ AR LFD I E G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
               V TYN  I  YCK GR+ DA  + + M   GV+P++ TYN LI  L + G V G  
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK----------------- 462
            I+  +  +G+   +VT  IL+  LCK  +  +A+ L +++ +                 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 463 ---------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
                          M  +   P+IVTY+ LI G C+ G++ +A  LLNE+  KG +P+ 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 508 TTYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
            TY I+ +                +M+++G  PD+  +   I G
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 544



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 189/384 (49%), Gaps = 21/384 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           G L+  L    K+ +    +   ++ G   SV    +  +   D LC+N ++++      
Sbjct: 224 GSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSV----YVFTVLIDGLCKNGMLVE------ 273

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
                     E F    + G + ++++C  L+     +G  +    ++  +     + ++
Sbjct: 274 --------AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++N  ++G CK G++  A  + ++M   GV P +VTYN LID  CK G +   ++   +
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE---I 382

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            K M  +G+ P+ VT   L+DG CK + +  A+ +F ++   G+   V +Y  LI+G C 
Sbjct: 383 VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             ++ EA+ L  +M    L P++VT + LI+G C+   +  A  L +++  +G  P  IT
Sbjct: 443 SRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTIT 502

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y+ L+DA  K+  +++A  + N M+ RG+ PDV  Y  +I G  +   ++   N+  E+ 
Sbjct: 503 YSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMH 562

Query: 427 NNGMRAGLVTYNILVGALCKDGKS 450
              +   +VTY IL  A+ K G +
Sbjct: 563 MKNLVPDIVTYTILFNAVFKSGSN 586



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 32/320 (10%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    LM  Y       +  E F   G++G K  V + N  +    K G+  D   V+
Sbjct: 289 NIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVF 348

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R  +  N+ ++N +++ LCKAG+++ A +I++ M   G++P +VT  IL+DG CK 
Sbjct: 349 DEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKS 408

Query: 235 GGIG--------------------------------KMYKADAVFKDMVENGILPNEVTF 262
             +                                 +M +A  + +DM    ++P+ VT+
Sbjct: 409 KRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTY 468

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           + LIDG C+   IS A ++  EM   G     +TY+ L++ L     LDEAV L ++M+ 
Sbjct: 469 SCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIK 528

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL+P+V+    +I+G+CK + +++A  LF ++  + L P ++TY  L +A  K G    
Sbjct: 529 RGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSY 588

Query: 383 AFAMRNSMLDRGVLPDVSTY 402
            +   N + D    P V  Y
Sbjct: 589 EWKFVNVIRDINPPPRVLKY 608


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 258/517 (49%), Gaps = 23/517 (4%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L    +D +  L +F W   +L    S+     L+H L  +K++ +   FL   +K  K 
Sbjct: 98  LLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKD 157

Query: 96  TSVST-IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
            S +  +F  L  C      + +I DML+ AYV+      GF  F++  + G   SV+SC
Sbjct: 158 CSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISC 217

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  L+K  + +    VYKEM R  I  N  +FN + +  C+ G ++K +D +E M+ 
Sbjct: 218 NCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEE 277

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P +VTYN LI  YC+K   G++  A  +++ M    +LP+ V++  L++G CK+  
Sbjct: 278 EGFEPDIVTYNTLISCYCRK---GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F  M   G+   +V++N+LI G C +GK+ E+ +L  EM+ SG+ P+ VT   
Sbjct: 335 VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQV 394

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI G+ K+  +  A  L  ++   G+  S   Y+ L+ + C+EGR   A ++   +  RG
Sbjct: 395 LIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRG 454

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            +P V  YN LI  L +  ++     + +E+ +  ++   +TY  L+  LC+  +S +A 
Sbjct: 455 YVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAE 514

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
           SL++EM    +    P+      L+  +C++  +  A  LL    ++  I +  +Y    
Sbjct: 515 SLMEEML---QSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLV 571

Query: 513 --------------VREEMMEKGFIPDIEGHMYNISG 535
                         +++ M++ GF P+I+     I G
Sbjct: 572 KTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHG 608



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 6/357 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            +R  + G +  +++ N L+    ++G+ +D  Y+Y+ M RR +  +L S+  ++NGLCK
Sbjct: 272 LERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCK 331

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK+ +A  +   M   G++P +V++N LI GYCK+G   KM ++ ++  +M+ +GI P+
Sbjct: 332 EGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEG---KMRESRSLLHEMIGSGICPD 388

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           +VT   LI+G+ K+  I +A+ +  E+   G+      Y+ L+  +C +G+   A +L  
Sbjct: 389 KVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQ 448

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +   G  P V   N LI   CK   +  A ++  ++  + + PS ITY  LI   C+  
Sbjct: 449 RISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTS 508

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R  +A ++   ML  G+LPD      L+    +E ++     ++             +YN
Sbjct: 509 RSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYN 568

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            LV   C+D  + + + L D M K+      PNI T+  +I G  +   +E    LL
Sbjct: 569 TLVKTYCEDADATRLMELQDRMLKVGFA---PNIQTFRQMIHGLWKAMAVEKDKLLL 622


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 222/406 (54%), Gaps = 33/406 (8%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V+  + ++  L K+G+  D   +Y EM+ + I  +L ++N +++G C +G+ ++A 
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++++M    ++P VVTY+ LI+ Y K+    K ++A+ ++ +M+  GI+PN +T+N++I
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKE---RKFFEAEELYDEMLPRGIIPNTITYNSMI 361

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK   + AA  +F  M + G +  V T+N+LI+G C   ++D+   L  EM  +GL 
Sbjct: 362 DGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLV 421

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF-- 384
            +  T N LI+GFC    +  A  L   +   G+ P ++T NTL+D  C  G+++DA   
Sbjct: 422 ADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481

Query: 385 --AMRNSMLD-------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             AM+ S +D        GV PDV TYN LI+GL  EG       +  E+ + G+    +
Sbjct: 482 FKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTI 541

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY+ ++  LCK  +  +A  + D    M  +   P++VT+N L+ G+C+ G+++D   L 
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFD---SMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598

Query: 496 NELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            E+  +G++ +  TY                  + +EM+  G  PD
Sbjct: 599 CEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 220/437 (50%), Gaps = 53/437 (12%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            ++L+  +    K       F +    G +  V++ + LL  L  E +  +   ++ +M 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC 174

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
           R     N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK G   
Sbjct: 175 RP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 238 --------------------------------GKMYKADAVFKDMVENGILPNEVTFNTL 265
                                           G+   A  ++ +M E GI P+  T+N +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGFC     S A ++ +EM    I   VVTY++LIN    + K  EA  L DEM+  G+
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN +T N++I+GFCK+  ++ A  +F  ++ +G SP V T+NTLID YC   R++D   
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M + G++ D +TYN LI G    G++    ++  +++++G+   +VT N L+  LC
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLEDANG 493
            +GK K A+    EMFK  ++ K             P++ TYN+LI G   +GK  +A  
Sbjct: 471 DNGKLKDAL----EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526

Query: 494 LLNELLEKGLIPNQTTY 510
           L  E+  +G++PN  TY
Sbjct: 527 LYKEMPHRGIVPNTITY 543



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 189/360 (52%), Gaps = 49/360 (13%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKE KF + E +Y EM  R I  N  ++N +++G CK  +L+ A 
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M + G SP V T+N LIDGYC   G  ++     +  +M E G++ +  T+NTLI
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYC---GAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD--------------- 311
            GFC   +++AA+ + ++M S G+   +VT N+L++GLC +GKL                
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 312 -------------------------------EAVALRDEMMASGLKPNVVTSNALINGFC 340
                                          EA  L  EM   G+ PN +T +++ING C
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  +++A  +FD +  +  SP V+T+NTL+  YCK GR++D   +   M  RG++ D  
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  LI G  + GN+ G  +I  E++++G+    +T   ++  L    + K+AV++L+++
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 196/377 (51%), Gaps = 17/377 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   + + N ++      G++ + + + +EM  R+I  N+ +++ ++N   K  K  +A
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M   G+ P  +TYN +IDG+CK+    ++  A+ +F  M   G  P+  TFNTL
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQ---NRLDAAEHMFYVMATKGCSPDVFTFNTL 395

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C  + I    ++  EM   G+ A   TYN+LI+G C+ G L+ A+ L  +M++SG+
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITYNTLIDAY 374
            P++VT N L++G C    ++ A  +F  + +            G+ P V TYN LI   
Sbjct: 456 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             EG+  +A  +   M  RG++P+  TY+ +I GL ++  ++    + + + +      +
Sbjct: 516 INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDV 575

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VT+N LV   CK G+    + L  E   M +     + +TY  LI GF + G +  A  +
Sbjct: 576 VTFNTLVSGYCKAGRVDDGLELFCE---MGRRGIVADAITYITLIHGFRKVGNINGALDI 632

Query: 495 LNELLEKGLIPNQTTYQ 511
             E++  G+ P+  T +
Sbjct: 633 FQEMISSGVYPDTITIR 649



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 205/412 (49%), Gaps = 32/412 (7%)

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +G+ G +   L     LR+   E K  ED   ++ +M R R   ++  FN ++  + +  
Sbjct: 36  SGEAGFRGESLK----LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRME 91

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           + +    + + M+   +   V ++NILI  +C      K+  A + F  + + G  P+ V
Sbjct: 92  RPDLVISLYQKMERKQIPCDVYSFNILIKCFCS---CSKLPFALSTFGKITKLGFQPDVV 148

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF+TL+ G C ++ +S A+ +F +M        VVT+ +L+NGLC +G++ EAVAL D M
Sbjct: 149 TFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRM 204

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGR 379
           +  GL+PN +T   +++G CK      A  L   + E   + P+V+ Y+ +ID   K+GR
Sbjct: 205 VEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGR 264

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
             DA  +   M ++G+ PD+ TYNC+I G    G     + ++ E++   +   +VTY+ 
Sbjct: 265 HSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSA 324

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ A  K+ K  +A  L DEM         PN +TYN +I GFC++ +L+ A  +   + 
Sbjct: 325 LINAYVKERKFFEAEELYDEML---PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMA 381

Query: 500 EKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
            KG  P+  T+  + +                EM E G + D   +   I G
Sbjct: 382 TKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 6/218 (2%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D LC N  + D L + +    K  +  +A +     G++  V + N L+  L+ EG
Sbjct: 463 NTLLDGLCDNGKLKDALEM-FKAMQKSKMDLDASRPFN--GVEPDVQTYNILISGLINEG 519

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           KF + E +YKEM  R I  N  +++ ++NGLCK  +L++A+ + + M S   SP VVT+N
Sbjct: 520 KFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 579

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+ GYCK G +    +   +F +M   GI+ + +T+ TLI GF K  NI+ A+ +F+EM
Sbjct: 580 TLVSGYCKAGRVDDGLE---LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            S G+    +T  S++  L    +L  AVA+ +++  S
Sbjct: 637 ISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 231/469 (49%), Gaps = 65/469 (13%)

Query: 115 NSIIIDMLMLAYVKNMKPHLG---FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF--ED 169
            S + D  + AY +   PHL      + +R    G++ S+ + N +L AL +      + 
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQA 191

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              V++ +   R+  N  +FN +++  C  G L  A   +  M+  G+SP  VTYN L++
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            +C+KG +G   +A A+   M  +GI P + T+NTL+  F +   I  A KV E M ++G
Sbjct: 252 AHCRKGMLG---EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRD------------------------------- 318
               + TYN L  GLC  GK+DEA  L+D                               
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 319 -----EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                EM   G+KP +VT N ++   CK+  +E+A    + I+E+GL+P VITYNTLIDA
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK G +  AF + + M+ +G+  D  T N ++  L +    E    +++     G    
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            V+Y  ++ A  K+   + A+ L D+M    + K  P+I TYN LIKG C+  +L++A  
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMI---ERKLIPSISTYNTLIKGLCRMERLKEAID 545

Query: 494 LLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            LNE +EKGL+P++TTY I+                  +M+E  F PD+
Sbjct: 546 KLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 206/388 (53%), Gaps = 8/388 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  + N L+ A  + G  +    V + M     E +L ++N +  GLC+AGK+++A
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA 332

Query: 206 SDIMEDMKSLGVS-PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             + ++M+ LG + P VVTYN L+D  C K        A  + ++M + G+ P  VT N 
Sbjct: 333 FRLKDEMERLGTALPDVVTYNTLVDA-CFKWRCSS--DALRLLEEMRDKGVKPTLVTHNI 389

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++   CK+  +  A+   E++   G+A  V+TYN+LI+  C  G + +A  L DEM+  G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           LK +  T N ++   CK K  E A  L     ++G  P  ++Y T++ AY KE   E A 
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M++R ++P +STYN LI GL R   ++   + +NE V  G+     TYNI++ A 
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+G  + A    ++M  +E   K P++VT N L+ G C  GKL+ A  L    +EKG  
Sbjct: 570 CKEGDLENAFRFHNKM--VENSFK-PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626

Query: 505 PNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            +  TY  + + M + G + D   H ++
Sbjct: 627 VDVITYNTLIQSMCKVGDV-DTALHFFD 653



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ A  K     D   + +EM+ + ++  L + N V+  LCK GKL +A   +E
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +   G++P V+TYN LID YCK G + K +    +  +MV  G+  +  T NT++   C
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAF---TLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K +    A ++       G     V+Y +++     +   + A+ L D+M+   L P++ 
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI G C+ + +++A    ++  E+GL P   TYN +I AYCKEG +E+AF   N M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++    PDV T N L+ GL   G ++    +    V  G +  ++TYN L+ ++CK G  
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A+   D+M   E +   P+  TYNV++    + G+ E+A+ +L++L + G +      
Sbjct: 646 DTALHFFDDM---EVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFAC 702

Query: 511 QIVREEMMEKGFIPDIEG 528
            +++    ++  + + EG
Sbjct: 703 PLLKPSSADEADVKEHEG 720



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 216/410 (52%), Gaps = 36/410 (8%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+K ++++ N ++++L KEGK E+     +++    +  ++ ++N +++  CKAG + 
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +M++M   G+     T N ++   CK   + +   A+ +     + G +P+EV++ 
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCK---MKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T++  + K+ N   A++++++M    +   + TYN+LI GLC   +L EA+   +E +  
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+  T N +I+ +CK+  +E A    + + E    P V+T NTL++  C  G+++ A
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +  S +++G   DV TYN LI  + + G+V+   +  +++   G++    TYN+++ A
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 444 LCKDGKSKKAVSLLDEMFKMEK--------------------------------EKKWPN 471
           L + G+S++A ++L ++    K                                EK   N
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 472 IV-TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + TY   + G C  G+L++A  +L+E+++KG+  + +TY  + E ++++
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKR 783



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 178/380 (46%), Gaps = 9/380 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           + L  + I  + L+ AY K       F         GLK    + N +L  L K  ++ED
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED 472

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +     +R    +  S+  V+    K      A  + + M    + P + TYN LI 
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C+   + ++ +A     + VE G++P+E T+N +I  +CK+ ++  A +   +M  + 
Sbjct: 533 GLCR---MERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               VVT N+L+NGLC+ GKLD+A+ L +  +  G K +V+T N LI   CK   V+ A 
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             FDD+  +GL P   TYN ++ A  + GR E+A  M + + D G L        L    
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSS 709

Query: 410 SREGNV-EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           + E +V E       E         L TY   +  LC  G+ K+A ++LDEM     +K 
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMM----QKG 765

Query: 469 WP-NIVTYNVLIKGFCQKGK 487
            P +  TY  L++G  ++ K
Sbjct: 766 MPVDCSTYITLMEGLIKRQK 785



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 4/211 (1%)

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L PN  T N L++  C K  +  A      +   GLSP  +TYNTL++A+C++G + +A 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           A+   M   G+ P   TYN L++  +R G ++    ++  +   G    L TYN+L   L
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL-EDANGLLNELLEKGL 503
           C+ GK  +A  L DEM ++      P++VTYN L+   C K +   DA  LL E+ +KG+
Sbjct: 324 CQAGKVDEAFRLKDEMERLGT--ALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGV 380

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
            P   T+ IV + + ++G + +  G +  I+
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIA 411


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 236/469 (50%), Gaps = 18/469 (3%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHM---------FVKNGKFTSVSTIFHALSTCSDSL 112
           S   TGR   +L + +  P +  F +          F + G       +F  +  C   L
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC--L 291

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           C +    + L+ A  K          F +    G+  ++ + N  ++ L KEG  +    
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           +   + R  +  ++ ++N V+ GLC+  ++ +A + +  M + G  P   TYN +IDGYC
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           KKG +     A+ + KD V  G  P+E T+ +L++GFC+D +   AM VF++    G+  
Sbjct: 412 KKGMV---VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            ++ YN+LI GLC  G +  A+ L +EM   G KP++ T N +ING CK   +  A  L 
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D   +G  P + TYNTL+D YC++ +++ A  + N M  +G+ PDV TYN L+ GL + 
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
              E V  I   +   G    ++TYN ++ +LC   K  +AV LL E   M+ +   P++
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGE---MKSKGLTPDV 645

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT-TYQIVREEMMEK 520
           V++  LI GFC+ G L+ A GL   + ++  + + T TY I+     E+
Sbjct: 646 VSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQ 694



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 227/460 (49%), Gaps = 23/460 (5%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           +S L     +GKF  +  +   + +  D+     + ++  M  Y +  K     + F+R 
Sbjct: 123 KSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEA-MRFYGRKGKIQEAVDTFERM 181

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
             +    SV S N ++  LV+ G F     VY  MK +++E ++ ++   +   C+ G+ 
Sbjct: 182 DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRP 241

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  ++ +M  LG     V Y  ++ G+ +    G   +A  +F +M+E  + P+  TF
Sbjct: 242 YAALRLLRNMPVLGCFSNAVAYCTVVTGFYE---FGDNDRARELFDEMLECCLCPDVTTF 298

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N L+   CK   +  + ++F+++   G+   + T+N  I GLC +G LD AV L   +  
Sbjct: 299 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 358

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL+P+VVT N +I G C+K  V +A      +   G  P+  TYN++ID YCK+G + D
Sbjct: 359 EGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVD 418

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +    + +G  PD  TY  L+ G  ++G+ +    +  + +  G+R  ++ YN L+ 
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIK 478

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G    A+ L++EM   EK  K P+I TYN++I G C+ G L DAN L+ + + KG
Sbjct: 479 GLCQQGLILPALQLMNEM--AEKGCK-PDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535

Query: 503 LIPNQTTYQIVRE----------------EMMEKGFIPDI 526
            IP+  TY  + +                 M  +G  PD+
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDV 575



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 203/401 (50%), Gaps = 42/401 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+  V++ N ++  L ++ +  + E    +M     E N  ++N +++G CK G +  A
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + I++D    G  P   TY  L++G+C+ G   +   A AVFKD +  G+ P+ + +NTL
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQ---AMAVFKDGLGKGLRPSIIVYNTL 476

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC-------------------- 305
           I G C+   I  A+++  EM   G    + TYN +INGLC                    
Sbjct: 477 IKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGC 536

Query: 306 ----------VDG-----KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                     VDG     KLD A+ L + M + G+ P+V+T N L+NG CK    E+   
Sbjct: 537 IPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVME 596

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +F  ++E+G +P++ITYNT+I++ C   ++ +A  +   M  +G+ PDV ++  LI G  
Sbjct: 597 IFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC 656

Query: 411 REGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           + G+++G   +   +     +     TYNI++ A  +    K A+ L  EM   +K    
Sbjct: 657 KVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM---KKNGCD 713

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           P+  TY VLI GFC+ G +      L E +EKG IP+ TT+
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTF 754



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 182/342 (53%), Gaps = 4/342 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + ++  P      FK     GL+ S++  N L++ L ++G       +  EM  + 
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            + ++ ++N ++NGLCK G L+ A+ ++ D  + G  P + TYN L+DGYC++    K+ 
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQL---KLD 557

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +   M   G+ P+ +T+NTL++G CK       M++F+ M   G A  ++TYN++I
Sbjct: 558 SAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 617

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GL 360
             LC   K++EAV L  EM + GL P+VV+   LI GFCK   ++ A  LF  + +Q  +
Sbjct: 618 ESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDV 677

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           S +  TYN +I A+ ++  M+ A  + + M   G  PD  TY  LI G  + GNV     
Sbjct: 678 SHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYK 737

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
            + E +  G    L T+  ++  LC + K ++AV ++  M +
Sbjct: 738 FLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQ 779



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 197/420 (46%), Gaps = 50/420 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC-------- 197
           G K ++ +   +L+ L   GKF ++E +  EM+      NLD  N +L G+         
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS-----NLD--NTLLEGVYVEAMRFYG 166

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           + GK+ +A D  E M      P V +YN +++   + G   + +K   V+  M +  +  
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHK---VYMRMKDKKVES 223

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T+   I  FC+     AA+++   M   G  +  V Y +++ G    G  D A  L 
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           DEM+   L P+V T N L++  CKK  V ++  LFD + ++G+ P++ T+N  I   CKE
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A  +   +   G+ PDV TYN +I GL R+  V      ++++VN G      TY
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 438 NILVGALCKDGKSKKAVSLL-DEMFKMEKEKKW--------------------------- 469
           N ++   CK G    A  +L D +FK  K  ++                           
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 470 ----PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
               P+I+ YN LIKG CQ+G +  A  L+NE+ EKG  P+  TY ++   + + G + D
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 130/255 (50%), Gaps = 6/255 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           + L+  Y + +K     E   R    G+   V++ N LL  L K  K E+V  ++K M  
Sbjct: 544 NTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE 603

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +    N+ ++N ++  LC + K+N+A D++ +MKS G++P VV++  LI G+CK G +  
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDG 663

Query: 240 MYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            Y    +F+ M +   +     T+N +I  F +  N+  A+++F EM  +G      TY 
Sbjct: 664 AY---GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LI+G C  G +++      E +  G  P++ T   ++N  C +  V++A  +   + ++
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQK 780

Query: 359 GLSPSVITYNTLIDA 373
            + P   T NT+ +A
Sbjct: 781 DIVPD--TVNTIFEA 793


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 207/373 (55%), Gaps = 9/373 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+K ++++ N L++     G+ E    +  EMK +  + ++ ++N +L+ +C  G+   
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR--- 310

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           AS+++ +MK +G+ P  V+YNILI G C   G  +M  A A   +MV+ G++P   T+NT
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRG-CSNNGDLEM--AFAYRDEMVKQGMVPTFYTYNT 367

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G   +  I AA  +  E+   GI    VTYN LING C  G   +A AL DEMM  G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P   T  +LI   C+K    +A  LF+ +  +G+ P ++  NTL+D +C  G M+ AF
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++   M    + PD  TYNCL+ GL  EG  E  R +M E+   G++   ++YN L+   
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G +K A  + DEM  +      P ++TYN L+KG  +  + E A  LL E+  +G++
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFN---PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604

Query: 505 PNQTTYQIVREEM 517
           PN +++  V E M
Sbjct: 605 PNDSSFCSVIEAM 617



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 228/464 (49%), Gaps = 26/464 (5%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHLGFEA 138
           PK  + L   V   +  S+  +F  L    D L  +++I+ D+L+    +        E 
Sbjct: 118 PKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIEC 177

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G      +CN +L  L +  + E+    Y +M R  I+ N+ +FN ++N LCK
Sbjct: 178 FYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCK 237

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL KA   +  M+  G+ P +VTYN L+ G+  +   G++  A  +  +M   G  P+
Sbjct: 238 EGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR---GRIEGARLIISEMKSKGFQPD 294

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N ++   C   N   A +V  EM   G+    V+YN LI G   +G L+ A A RD
Sbjct: 295 MQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+ P   T N LI+G   +  +E A +L  +I E+G+    +TYN LI+ YC+ G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             + AFA+ + M+  G+ P   TY  LI  L R+        +  ++V  GM+  LV  N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   C  G   +A SLL EM  M      P+ VTYN L++G C +GK E+A  L+ E+
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSIN---PDDVTYNCLMRGLCGEGKFEEARELMGEM 528

Query: 499 LEKGLIPNQTTYQ----------------IVREEMMEKGFIPDI 526
             +G+ P+  +Y                 +VR+EM+  GF P +
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 145/265 (54%), Gaps = 3/265 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  + N L+  L  E K E  E + +E++ + I L+  ++N ++NG C+ G   KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M + G+ P   TY  LI   C+K    K  +AD +F+ +V  G+ P+ V  NTL
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKN---KTREADELFEKVVGKGMKPDLVMMNTL 473

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG C   N+  A  + +EM    I    VTYN L+ GLC +GK +EA  L  EM   G+
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+ ++ N LI+G+ KK   + A ++ D++   G +P+++TYN L+    K    E A  
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLS 410
           +   M   G++P+ S++  +I  +S
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMS 618



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 9/296 (3%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SPK VT  +      +K  I  ++    +  D +E     + + F+ L+   C+   +  
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLET---KSTILFDLLVRCCCQLRMVDE 173

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A++ F  M   G      T N ++  L    +++ A     +M    +K NV T N +IN
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             CK+  ++KA+     +   G+ P+++TYNTL+  +   GR+E A  + + M  +G  P
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D+ TYN +++ +  EG    V   M E+   G+    V+YNIL+     +G  + A +  
Sbjct: 294 DMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYR 350

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           DEM    K+   P   TYN LI G   + K+E A  L+ E+ EKG++ +  TY I+
Sbjct: 351 DEMV---KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 24/257 (9%)

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             + ++ L+   C    +DEA+     M   G  P   T N ++    +   +E A V +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+    +  +V T+N +I+  CKEG+++ A      M   G+ P + TYN L+ G S  
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G +EG R I++E+ + G +  + TYN ++  +C +G++ + +  + E+  +      P+ 
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV------PDS 327

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREE 516
           V+YN+LI+G    G LE A    +E++++G++P   TY                +I+  E
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387

Query: 517 MMEKGFIPDIEGHMYNI 533
           + EKG + D     YNI
Sbjct: 388 IREKGIVLD--SVTYNI 402


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 223/412 (54%), Gaps = 46/412 (11%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN LL AL +  +F+ +  +  EMK   I+ N+ +F  ++N LCK  ++++A ++ E M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366

Query: 213 ---KSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNTLI 266
              +S G  V P V+TYN LIDG CK   +G+  +   + + M  +   +PN VT+N LI
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCK---VGRQEEGLGLVERMRSQPRCMPNTVTYNCLI 423

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+CK   I AA ++F++M   G+   VVT N+L++G+C  G+++ AV   +EM   GLK
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDD-------------------------------- 354
            N VT  ALI  FC    +EKA  LFD+                                
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543

Query: 355 ---ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G SP ++++N LI+ +C++ ++++A+ M   M + G+ PD  TYN LI+  S+
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G+      +M ++V  G+   +VTY  L+ A C +G   +A+ +  +M    K    PN
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP--PN 661

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            V YN+LI   C+K +++ A  L++++  KG+ PN  T+  + + + EK ++
Sbjct: 662 TVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWL 713



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 185/336 (55%), Gaps = 12/336 (3%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++ LC++G+ ++A D++  +  LG   +  + N L+    +     +M   + +  +M 
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRM---NTLLAEMK 332

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG---SHG--IAAGVVTYNSLINGLCV 306
           E  I PN VTF  LI+  CK   +  A++VFE+M    S+G  +   V+TYN+LI+GLC 
Sbjct: 333 EMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCK 392

Query: 307 DGKLDEAVALRDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            G+ +E + L + M +     PN VT N LI+G+CK  ++E AR LFD +++ G+ P+V+
Sbjct: 393 VGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T NTL+D  CK GR+  A    N M  +G+  +  TY  LI       N+E    + +E+
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           +  G     + Y  L+  L + GK  +A  +L    KM++    P+IV++NVLI GFC+K
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS---KMKEAGFSPDIVSFNVLINGFCRK 569

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            KL++A  +L E+   G+ P+  TY  +     + G
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 181/386 (46%), Gaps = 49/386 (12%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFVLNGLCKAGKLN 203
           + ++  V++ N L+  L K G+ E+   + + M+ + R   N  ++N +++G CKA  + 
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ + M   GV P VVT N L+DG CK G I     A   F +M   G+  N VT+ 
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING---AVEFFNEMQGKGLKGNAVTYT 490

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI  FC   NI  AM++F+EM   G +   + Y +LI+GL   GKLD A  +  +M  +
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P++V+ N LINGFC+K  +++A  +  ++   G+ P  +TYNTLI  + K G    A
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 384 FAMRNSMLDRGVLPDVSTY------------------------------------NCLIA 407
             +   M+  G++P V TY                                    N LI 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------- 460
            L R+  V+   ++M+++   G++    T+N +   L +     KA  L+D M       
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730

Query: 461 --FKMEKEKKWPNIVTYNVLIKGFCQ 484
               ME   +W + V     +K F Q
Sbjct: 731 DYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 165/315 (52%), Gaps = 4/315 (1%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D +  N + ++ L+    K+ + +   E F      GLK + ++   L+RA       E 
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++ EM       +   +  +++GL +AGKL++AS ++  MK  G SP +V++N+LI+
Sbjct: 505 AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLIN 564

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C+K  + + Y+   + K+M   GI P+ VT+NTLI  F K  + S A ++ ++M   G
Sbjct: 565 GFCRKNKLDEAYE---MLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVAL-RDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           +   VVTY +LI+  C++G LDEA+ + RD    S + PN V  N LIN  C+K  V+ A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L DD+  +G+ P+  T+N +     ++  +  AF + + M +    PD  T   L   
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEW 741

Query: 409 LSREGNVEGVRNIMN 423
           LS  G    +++ + 
Sbjct: 742 LSAVGETAKLKSFVQ 756



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 172/345 (49%), Gaps = 4/345 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+  Y K        E F +    G+  +V++ N L+  + K G+       +
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+ + ++ N  ++  ++   C    + KA ++ ++M   G SP  + Y  LI G  + 
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   K+ +A  V   M E G  P+ V+FN LI+GFC+   +  A ++ +EM + GI    
Sbjct: 535 G---KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LI+     G    A  L  +M+  GL P VVT  ALI+ +C    +++A  +F D
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 355 ISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +S    + P+ + YN LI++ C++ +++ A ++ + M  +GV P+ +T+N +  GL  + 
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
            +     +M+ +  +      +T  IL   L   G++ K  S + 
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 174/420 (41%), Gaps = 75/420 (17%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY--NILIDG 230
           ++K  K  +I L++++   ++    +A  ++++  +  ++       + +T+  NILID 
Sbjct: 146 LFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRNILIDV 201

Query: 231 YCKKGGIG-KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG--- 286
             +KG +   ++  D + +   E    PN  T + +     K + +  A+   E +G   
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAE--FPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVS 259

Query: 287 ---SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
               H +    +    LI+ LC  G+ D A  +   +M  G      + NAL+    + +
Sbjct: 260 KFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAR 319

Query: 344 LVEKARVLFDDISEQGLSPSVITY------------------------------------ 367
             ++   L  ++ E  + P+V+T+                                    
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPD 379

Query: 368 ----NTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIM 422
               NTLID  CK GR E+   +   M  +   +P+  TYNCLI G  +   +E  R + 
Sbjct: 380 VITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELF 439

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +++  +G+   +VT N LV  +CK G+   AV   +E   M+ +    N VTY  LI+ F
Sbjct: 440 DQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNE---MQGKGLKGNAVTYTALIRAF 496

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
           C    +E A  L +E+LE G  P+   Y                  V  +M E GF PDI
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 29/407 (7%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           ++R    G    V++ N LL    K G+ ++   ++    +R    ++ ++N ++NG CK
Sbjct: 33  YERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCK 92

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A KL++A  I++ M S  + P VVTYN L++G CK G      + D     +V+ G  PN
Sbjct: 93  ADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNG------RVDEARMLIVDKGFSPN 146

Query: 259 EVTFNTLIDGFCKD-ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
            +T++TLI G C++   +S A+K+F  +   G    V TYN LI+GL  + +++EA  L 
Sbjct: 147 VITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELF 206

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++  GL+P+ +T    I+G CK   VE A ++  D+ E+G  P V+++N +I+  CKE
Sbjct: 207 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 266

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+++A  + + M  +G  P+  ++N LI G  R G  +       E++  G++  +VTY
Sbjct: 267 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 326

Query: 438 NILVGALCK---DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           NILV  LCK   +G+ K+A++L D M    ++ + P++VTY+ LI G  + GKL+DA  L
Sbjct: 327 NILVDGLCKARQEGRIKEAITLFDAMI---EKGRVPDVVTYSALIDGLGKAGKLDDARRL 383

Query: 495 LNELLEKGLIPNQTTY----------QIVRE------EMMEKGFIPD 525
           L  +  KG IPN  TY          + V E       M+EKG +PD
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPD 430



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 213/379 (56%), Gaps = 29/379 (7%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M++     N  ++N +L+GLC  G+++ A  + E M   G SP VVTYN L+ G+CK   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK--- 57

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G++ +A  +F   V+ G +P+ VT+N LI+GFCK + +  A ++ + M S  +   VVT
Sbjct: 58  VGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDI 355
           YNSL+NGLC +G++DEA  L   ++  G  PNV+T + LI+G C++ + V +A  LF  +
Sbjct: 118 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +QG  P V TYN LID   KE R+ +AF + + ++  G+ PD  TY   I GL + G V
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    ++ ++   G    +V++N ++  LCK+ +  +A  LL     ME +   PN +++
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS---GMEAKGCSPNAISF 291

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------REE------------ 516
           N LI G C+ GK + A     E+L++G+ P   TY I+       R+E            
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 517 MMEKGFIPDIEGHMYNISG 535
           M+EKG +PD+  +   I G
Sbjct: 352 MIEKGRVPDVVTYSALIDG 370



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 219/385 (56%), Gaps = 13/385 (3%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G   + ++ N LL  L   G+  D + +Y+ M +     ++ ++N +L+G CK G+L++
Sbjct: 4   HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I +     G  P VVTYN LI+G+CK     K+ +A  + + MV   ++P+ VT+N+
Sbjct: 64  ALKIFDGAVKRGFVPDVVTYNALINGFCKA---DKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-LDEAVALRDEMMAS 323
           L++G CK+  +  A  +  +    G +  V+TY++LI+GLC + + + EA+ L   ++  
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G +P V T N LI+G  K+  V +A  LF  + + GL P  ITY   ID  CK GR+EDA
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   M ++G +PDV ++N +I GL +E  V+    +++ +   G     +++N L+  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC---QKGKLEDANGLLNELLE 500
            C+ GK KKA++   EM K   +   P +VTYN+L+ G C   Q+G++++A  L + ++E
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVK---PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPD 525
           KG +P+  TY  + + + + G + D
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDD 379



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 211/378 (55%), Gaps = 11/378 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   G    V++ N L+    K  K ++ + + + M    +  ++ ++N ++NGLCK
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++++A  ++ D    G SP V+TY+ LI G C++  +  + +A  +F  +++ G  P 
Sbjct: 128 NGRVDEARMLIVDK---GFSPNVITYSTLISGLCRE--LRGVSEALKLFGSVLKQGYEPE 182

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N LIDG  K++ ++ A ++F  +  HG+    +TY   I+GLC  G++++A+ +  
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M   G  P+VV+ NA+ING CK+K V++A VL   +  +G SP+ I++NTLI   C+ G
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 302

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGVRNIMNELVNNGMRAGLV 435
           + + A      ML RGV P V TYN L+ GL +   EG ++    + + ++  G    +V
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY+ L+  L K GK   A  LL     ME +   PN+ TYN LI G C   K+++A  L 
Sbjct: 363 TYSALIDGLGKAGKLDDARRLLG---AMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419

Query: 496 NELLEKGLIPNQTTYQIV 513
             ++EKG +P+  TY  +
Sbjct: 420 VAMVEKGCVPDTITYGTI 437



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 191/364 (52%), Gaps = 12/364 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K  K      I   +   S++L  + +  + L+    KN +     EA     
Sbjct: 85  ALINGFCKADKLDEAQRILQRM--VSENLVPDVVTYNSLVNGLCKNGRVD---EARMLIV 139

Query: 144 DYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           D G   +V++ + L+  L +E +   +   ++  + ++  E  + ++N +++GL K  ++
Sbjct: 140 DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRV 199

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           N+A ++   +   G+ P  +TY + IDG CK G   ++  A  + KDM E G +P+ V+ 
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDALLMLKDMDEKGCVPDVVSH 256

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N +I+G CK++ +  A  +   M + G +   +++N+LI G C  GK  +A+    EM+ 
Sbjct: 257 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 316

Query: 323 SGLKPNVVTSNALINGFCKKKL---VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
            G+KP VVT N L++G CK +    +++A  LFD + E+G  P V+TY+ LID   K G+
Sbjct: 317 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 376

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++DA  +  +M  +G +P+V TYN LI+GL     V+    +   +V  G     +TY  
Sbjct: 377 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGT 436

Query: 440 LVGA 443
           ++ A
Sbjct: 437 IISA 440



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 184/361 (50%), Gaps = 29/361 (8%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L++    A K  + +  L   V       V T     ++  + LC+N  + +  ML   K
Sbjct: 86  LINGFCKADKLDEAQRILQRMVSENLVPDVVT----YNSLVNGLCKNGRVDEARMLIVDK 141

Query: 129 NMKPHL--------GF--------EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFED 169
              P++        G         EA K  G     G +  V + N L+  L+KE +  +
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++  + +  +E +  ++   ++GLCKAG++  A  +++DM   G  P VV++N +I+
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK+    ++ +A+ +   M   G  PN ++FNTLI G C+      AM  F+EM   G
Sbjct: 262 GLCKEK---RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318

Query: 290 IAAGVVTYNSLINGLC---VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           +   VVTYN L++GLC    +G++ EA+ L D M+  G  P+VVT +ALI+G  K   ++
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR L   +  +G  P+V TYN+LI   C   ++++A  +  +M+++G +PD  TY  +I
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438

Query: 407 A 407
           +
Sbjct: 439 S 439


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 201/333 (60%), Gaps = 22/333 (6%)

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           + +M+  G+ P  V Y ++I G+C+ G    M  A  V  +MV  G LP+ VT+NTL++G
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAG---LMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+  +  A  +  EM   G+   + T+ +LI+G C++GKLD+A+ L D M+   L+P+
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N LI+G C++  ++KA  L+DD+  + + P+ +TY+ LID++C++G++EDAF   +
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+++G+LP++ TYN +I G  R GNV   +  + +++ N +   L+TYN L+    K+ 
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K   A  LL+    MEKEK  P++VTYN+LI GF   G +++A  +  ++  KG+ P++ 
Sbjct: 241 KMHDAFKLLN---MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 297

Query: 509 TYQ----------------IVREEMMEKGFIPD 525
           TY                  + +EM+++GF PD
Sbjct: 298 TYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 177/318 (55%), Gaps = 6/318 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  V+ G C+AG ++ A  + ++M   G  P VVTYN L++G CK+    ++  A+ +  
Sbjct: 19  YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE---RRLLDAEGLLN 75

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M E G+ P+  TF TLI G+C +  +  A+++F+ M +  +   +VTYN+LI+G+C  G
Sbjct: 76  EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 135

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LD+A  L D+M +  + PN VT + LI+  C+K  VE A    D++  +G+ P+++TYN
Sbjct: 136 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 195

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           ++I  YC+ G +         M+   V PD+ TYN LI G  +E  +     ++N +   
Sbjct: 196 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 255

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            ++  +VTYN+L+      G  ++A  + ++M     E   P+  TY  +I G    G  
Sbjct: 256 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE---PDRYTYMSMINGHVTAGNS 312

Query: 489 EDANGLLNELLEKGLIPN 506
           ++A  L +E+L++G  P+
Sbjct: 313 KEAFQLHDEMLQRGFAPD 330



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 156/284 (54%), Gaps = 3/284 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N LL  L KE +  D E +  EM+ R +  +L +F  +++G C  GKL+KA
Sbjct: 46  GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 105

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M +  + P +VTYN LIDG C++G +    KA+ ++ DM    I PN VT++ L
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD---KANDLWDDMHSREIFPNHVTYSIL 162

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C+   +  A    +EM + GI   ++TYNS+I G C  G + +      +MM + +
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+++T N LI+G+ K+  +  A  L + + ++ + P V+TYN LI+ +   G +++A  
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +   M  +G+ PD  TY  +I G    GN +    + +E++  G
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 143/249 (57%), Gaps = 8/249 (3%)

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           M    EM   G+    V Y  +I G C  G + +A+ +RDEM+  G  P+VVT N L+NG
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            CK++ +  A  L +++ E+G+ P + T+ TLI  YC EG+++ A  + ++ML++ + PD
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           + TYN LI G+ R+G+++   ++ +++ +  +    VTY+IL+ + C+ G+ + A   LD
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-----V 513
           EM     +   PNI+TYN +IKG+C+ G +      L +++   + P+  TY       +
Sbjct: 181 EMI---NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 237

Query: 514 REEMMEKGF 522
           +E+ M   F
Sbjct: 238 KEDKMHDAF 246



 Score = 38.5 bits (88), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 22/103 (21%), Positives = 49/103 (47%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I  + L+  Y+K  K H  F+         ++  V++ N L+      G  ++  +++++
Sbjct: 227 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 286

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           M  + IE +  ++  ++NG   AG   +A  + ++M   G +P
Sbjct: 287 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL     +   L+    +    ++   V+  M ++  + N  S+  +++GLC+AG++N+A
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  DM      P V TY +LI       G G+  +A  +F +M E G  PN  T+  L
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYAL---SGSGRKVEALNLFNEMKEKGCEPNVHTYTVL 340

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK+  +  A K+  EM   G+   VVTYN+LI+G C +G +D+A  + D M ++  
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N LI G CKK+ V KA  L + + E+ LSPS+ITYN+LI   CK   +E A+ 
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M + G++PD  TY+  I  L +EG VE    + + +   G++A  V Y  L+   C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK   A SLL+ M     +   PN  TYNVLI+G C++ K+++A+ L+ ++L  G+ P
Sbjct: 521 KVGKIDVAYSLLERML---NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 506 NQTTYQIVREEMMEKG 521
              TY I+  EM++ G
Sbjct: 578 TVVTYTILIGEMLKDG 593



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 204/357 (57%), Gaps = 6/357 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL   G+  +   ++ EMK +  E N+ ++  +++GLCK  K+++A  ++ +M   G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVTYN LIDGYCK+G I   ++   +   M  N   PN  T+N LI G CK   + 
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFE---ILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            AM +  +M    ++  ++TYNSLI+G C    L+ A  L   M  +GL P+  T +  I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +  CK+  VE+A  LFD +  +G+  + + Y  LID YCK G+++ A+++   ML+   L
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN LI GL +E  ++   +++ +++  G++  +VTY IL+G + KDG    A+ +
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + M  +  +   P++ TY   +  +  +G LE+ + ++ ++ E+G++P+  TY ++
Sbjct: 602 FNHMVSLGYQ---PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 224/430 (52%), Gaps = 22/430 (5%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +N      +E F      G + + +S   L+  L + G+  +   ++ +M    
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               + ++  ++  L  +G+  +A ++  +MK  G  P V TY +LIDG CK+    KM 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE---NKMD 351

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  +  +M E G++P+ VT+N LIDG+CK+  I  A ++ + M S+       TYN LI
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC   K+ +A+AL ++M+   L P+++T N+LI+G CK   +E A  L   ++E GL 
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY+  ID  CKEGR+E+A  + +S+  +GV  +   Y  LI G  + G ++   ++
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  ++N+       TYN+L+  LCK+ K K+A SL+ +M  M  +   P +VTY +LI  
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK---PTVVTYTILIGE 588

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY---------QIVREE-------MMEKGFIPD 525
             + G  + A  + N ++  G  P+  TY         Q + EE       M E+G +PD
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 526 IEGHMYNISG 535
           +  +   I G
Sbjct: 649 LVTYTVLIDG 658



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 202/365 (55%), Gaps = 12/365 (3%)

Query: 167 FEDVEYVYKEMKRR------RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
            EDV +V +  ++       + +  L  +N +L  L K   +++   +  ++ +  +SP 
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           + T+N +++GYCK   IG + +A+     +V+ G+ P+  T+ +LI G C+++ +  A +
Sbjct: 194 IYTFNAMVNGYCK---IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           VF  M   G     V+Y +LI+GLC  G+++EA+ L  +M      P V T   LI    
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
                 +A  LF+++ E+G  P+V TY  LID  CKE +M++A  M + M ++G++P V 
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN LI G  +EG ++    I++ + +N       TYN L+  LCK  K  KA++LL+  
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN-- 428

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            KM + K  P+++TYN LI G C+   LE A  LL+ + E GL+P+Q TY +  + + ++
Sbjct: 429 -KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 521 GFIPD 525
           G + +
Sbjct: 488 GRVEE 492



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 216/423 (51%), Gaps = 8/423 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H   + G+      +F  ++   D+ C       +L+ A   + +       F    
Sbjct: 269 NLIHGLCEAGRINEALKLFADMT--EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G + +V +   L+  L KE K ++   +  EM  + +  ++ ++N +++G CK G ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I++ M+S    P   TYN LI G CKK    K++KA A+   M+E  + P+ +T+N
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKK---RKVHKAMALLNKMLERKLSPSLITYN 443

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI G CK  ++ +A ++   M  +G+     TY+  I+ LC +G+++EA  L D + A 
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+K N V   ALI+G+CK   ++ A  L + +      P+  TYN LI+  CKE +M++A
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            ++   ML  GV P V TY  LI  + ++G  +    + N +V+ G +  + TY   + A
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
               G  ++     D + KM +E   P++VTY VLI G+ + G    A   L  +++ G 
Sbjct: 624 YFSQGMLEEVD---DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 504 IPN 506
            P+
Sbjct: 681 KPS 683



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 207/416 (49%), Gaps = 15/416 (3%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           P +R++   ++    +G+      +F+ +    C  ++   +++ID L     K  K   
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL----CKENKMDE 352

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +      + GL  SV++ N L+    KEG  +D   +   M+      N  ++N ++ 
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLCK  K++KA  ++  M    +SP ++TYN LI G CK   +   Y+   +   M ENG
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR---LLSLMNENG 469

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           ++P++ T++  ID  CK+  +  A  +F+ + + G+ A  V Y +LI+G C  GK+D A 
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L + M+     PN  T N LI G CK+K +++A  L   +   G+ P+V+TY  LI   
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K+G  + A  + N M+  G  PDV TY   +     +G +E V +++ ++   G+   L
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           VTY +L+    + G + +A   L  M     +   P++   ++LIK    + ++++
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK---PSLYIVSILIKNLSHENRMKE 702



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 200/423 (47%), Gaps = 45/423 (10%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N+L+  L K+ K      +  +M  R++  +L ++N +++G CK   L  A  ++  M  
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P   TY++ ID  CK+G   ++ +A  +F  +   G+  NEV +  LIDG+CK   
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEG---RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A  + E M +        TYN LI GLC + K+ EA +L  +M+  G+KP VVT   
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI    K    + A  +F+ +   G  P V TY   + AY  +G +E+   +   M + G
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK-- 452
           +LPD+ TY  LI G +R G      + +  +V+ G +  L   +IL+  L  + + K+  
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704

Query: 453 ------------AVSLLDEMFKMEKEKKWP------------NIVTYNVLIKGFCQKGKL 488
                       +V + D    +E E                ++  Y  LI GFCQ+ +L
Sbjct: 705 SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 764

Query: 489 EDANGLLNELLEKGLIPNQTTY--------------QIVR--EEMMEKGFIPDIEGHMYN 532
           E+A GL++ + E+G+ P++  Y              + VR  + M+E G +P +E +   
Sbjct: 765 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824

Query: 533 ISG 535
           + G
Sbjct: 825 VCG 827



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 217/499 (43%), Gaps = 58/499 (11%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           F+    K G+     T+F ++   +  +  N +I   L+  Y K  K  + +   +R  +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVK--AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
                +  + N L+  L KE K ++   +  +M    ++  + ++  ++  + K G  + 
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  +   M SLG  P V TY   +  Y  +G    + + D V   M E GILP+ VT+  
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG---MLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE------------ 312
           LIDG+ +      A    + M   G    +   + LI  L  + ++ E            
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 313 -----------------AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
                            A+ L ++M+  G   +V    ALI GFC+++ +E+A+ L   +
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            E+G+SPS   YN+L+D  CK G   +A  + ++M++ G+LP + +Y  L+ GL  EG+ 
Sbjct: 775 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 834

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  + + + L++ G     V + +L+  L K     +   L+D M   EK+      +  
Sbjct: 835 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM--EEKDATAQADIAC 892

Query: 476 NVLIK---GFCQKGKLEDA---------------NGLLNELLEKGLIPNQTTYQIVREE- 516
             L++       KG LED                +GL+N L+  GL    T   +V E+ 
Sbjct: 893 AALMRLAAANSTKGALEDHELRGLSVNHGELTQLSGLVNNLISVGLGCVATFAAVVLEDN 952

Query: 517 -MMEKGF--IPDIEGHMYN 532
            +MEK +  I  +  H +N
Sbjct: 953 VLMEKAWQDIGILRAHAWN 971


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 198/340 (58%), Gaps = 6/340 (1%)

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           ++  L +FN +L+GLC   K+  A  + ++M  +G  P V+TY+ +I+G CK   +G   
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCK---MGNTT 62

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  + K M E G  PN V +NT+ID  CKD  ++ AM  F EM   GI   V TY+S++
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  G+++EA +L  +M+   + PN VT   LI+G CKK+++ +A ++F+ ++E+GL 
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P V TYN L+D YC   +M++A  + N M  +G  P+V +YN LI G  + G ++  + +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+ +  +   + TY+ L+   C+ G+ ++A  LL EM         PN++TY++++ G
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY---GLLPNLITYSIVLDG 299

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+ G L++A  LL  + E  + PN   Y I+ E M   G
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 215/377 (57%), Gaps = 6/377 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ ++++ N LL  L  + K  D   ++ EM +   E ++ +++ ++NGLCK G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++ M+  G  P VV YN +ID  CK   +    +A   F +MV+ GI P+  T++++
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLV---TEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GFC    ++ A  +F++M    +    VT+  LI+GLC    + EA  + + M   GL
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+V T NAL++G+C +  +++A+ LF+ +  +G +P+V +YN LI+ +CK GR+++A  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + + PD+ TY+ L+ G  + G  +  + ++ E+ + G+   L+TY+I++  LC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G   +A  LL     M++ K  PNI  Y +LI+G C  GKLE A  L + L  KG+ P
Sbjct: 302 KHGHLDEAFELLK---AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358

Query: 506 NQTTYQIVREEMMEKGF 522
              TY ++   +++ G 
Sbjct: 359 TVVTYTVMISGLLKGGL 375



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 212/382 (55%), Gaps = 6/382 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  +  K+  + G K +V++ N ++ +L K+    +    + EM +  I  ++ +++ +L
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C  G++N+A+ + + M    V P  VT+ ILIDG CKK  I + +    VF+ M E 
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW---LVFETMTEK 179

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+  T+N L+DG+C    +  A K+F  M   G A  V +YN LING C  G++DEA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  EM    L P++ T + L+ GFC+    ++A+ L  ++   GL P++ITY+ ++D 
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G +++AF +  +M +  + P++  Y  LI G+   G +E  R + + L   G++  
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY +++  L K G S +A  L  EM         PN  TYNV+I+GF + G   +A  
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREM---AVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416

Query: 494 LLNELLEKGLIPNQTTYQIVRE 515
           L+ E++ KG   + +T++++ +
Sbjct: 417 LIEEMVGKGFSADSSTFRMLSD 438



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 180/357 (50%), Gaps = 17/357 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A +T  DSLC++ ++ + +              + F      G+   V + + +L     
Sbjct: 82  AYNTIIDSLCKDRLVTEAM--------------DFFSEMVKEGIPPDVFTYSSILHGFCN 127

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+  +   ++K+M  R +  N  +F  +++GLCK   +++A  + E M   G+ P V T
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN L+DGYC +    +M +A  +F  M   G  PN  ++N LI+G CK   I  A  +  
Sbjct: 188 YNALVDGYCSRS---QMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM    +   + TY++L+ G C  G+  EA  L  EM + GL PN++T + +++G CK  
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  L   + E  + P++  Y  LI+  C  G++E A  + +++  +G+ P V TY 
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +I+GL + G       +  E+  NG      TYN+++    ++G +  AV L++EM
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M + G+ P  VTFNTL+ G C    I  A+K+F+EM   G    V+TY+++INGLC  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
              A+ L  +M   G KPNVV  N +I+  CK +LV +A   F ++ ++G+ P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVL--------------------------------- 396
           ++  +C  GR+ +A ++   M++R V+                                 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 397 --PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV TYN L+ G      ++  + + N +   G    + +YNIL+   CK G+  +A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL E   M  +   P+I TY+ L++GFCQ G+ ++A  LL E+   GL+PN  TY IV 
Sbjct: 241 GLLAE---MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 515 EEMMEKGFI 523
           + + + G +
Sbjct: 298 DGLCKHGHL 306



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 139/250 (55%), Gaps = 5/250 (2%)

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   +VT+N+L++GLC   K+ +AV L DEM+  G +P+V+T + +ING CK      A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L   + E+G  P+V+ YNT+ID+ CK+  + +A    + M+  G+ PDV TY+ ++ G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
               G V    ++  ++V   +    VT+ IL+  LCK    K+ +S    +F+   EK 
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK----KRMISEAWLVFETMTEKG 180

Query: 469 W-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             P++ TYN L+ G+C + ++++A  L N +  KG  PN  +Y I+     + G I + +
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 528 GHMYNISGTS 537
           G +  +S  S
Sbjct: 241 GLLAEMSHKS 250



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 149/324 (45%), Gaps = 40/324 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S LH F   G+    +++F  +     ++  N +   +L+    K       +  F+   
Sbjct: 120 SILHGFCNLGRVNEATSLFKQM--VERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL+  V + N L+       + ++ + ++  M R+    N+ S+N ++NG CK+G+++
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++ +M    ++P + TY+ L+ G+C+   +G+  +A  + K+M   G+LPN +T++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ---VGRPQEAQELLKEMCSYGLLPNLITYS 294

Query: 264 TLIDGFCK----DE-------------------------------NISAAMKVFEEMGSH 288
            ++DG CK    DE                                + AA ++F  +   
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   VVTY  +I+GL   G  +EA  L  EM  +G  PN  T N +I GF +      A
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414

Query: 349 RVLFDDISEQGLSPSVITYNTLID 372
             L +++  +G S    T+  L D
Sbjct: 415 VRLIEEMVGKGFSADSSTFRMLSD 438


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 250/488 (51%), Gaps = 45/488 (9%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
            G LL SL+ + K  K   F+   +  G    +ST    +S     LCR S I D   + 
Sbjct: 19  VGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYIS----GLCRASRIGDAQTV- 72

Query: 126 YVKNMKPHLGF------------------------EAFKRAGDYGLKSSVLSCNQLLRAL 161
               M+ H GF                          ++R    G    V++ N LL   
Sbjct: 73  -FDGMRKH-GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K GK ++   ++    +R    ++ ++N ++NG CKA KL++A  I++ M S  + P V
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD-ENISAAMK 280
           VTYN L++G CK G      + D     +V+ G  PN +T++TLI G C++   + +A +
Sbjct: 191 VTYNSLVNGLCKNG------RVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQ 244

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + E+M  +G    +V+YN+LI+GL  +  + EA+ L   ++  G +P V T N LI+G  
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  V +A  LF  + + GL P  ITY   ID  CK GR+EDA  M   M ++G +PDV 
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           ++N +I GL +E  V+    +++ +   G     +++N L+   C+ GK KKA++   EM
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424

Query: 461 FKMEKEKKWPNIVTYNVLIKGFC---QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            K   +   P +VTYN+L+ G C   Q+G++++A  L + ++EKG +P+  TY  + + +
Sbjct: 425 LKRGVK---PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 481

Query: 518 MEKGFIPD 525
            + G + D
Sbjct: 482 GKAGKLDD 489



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 232/428 (54%), Gaps = 27/428 (6%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+  + K  K     + F  A   G    V++ N L+    K  K ++ + + + 
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    +  ++ ++N ++NGLCK G++++A  ++ D    G SP V+TY+ LI G C++  
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRE-- 235

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + ++  A  + + MV NG  P+ V++N LI G  +++ +S A+K+F  +   G    V T
Sbjct: 236 LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPT 295

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI+GL  + +++EA  L   ++  GL+P+ +T    I+G CK   VE A ++  D+ 
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G  P V+++N +I+  CKE R+++A  + + M  +G  P+  ++N LI G  R G  +
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCK---DGKSKKAVSLLDEMFKMEKEKKWPNIV 473
                  E++  G++  +VTYNILV  LCK   +G+ K+A++L D M    ++ + P++V
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI---EKGRVPDVV 472

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EM 517
           TY+ LI G  + GKL+DA  LL  +  KG IPN  TY  +                   M
Sbjct: 473 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAM 532

Query: 518 MEKGFIPD 525
           +EKG +PD
Sbjct: 533 VEKGCVPD 540



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 230/448 (51%), Gaps = 20/448 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + LH F K GK      IF            + +  + L+  + K  K        +R  
Sbjct: 125 TLLHGFCKVGKLDEALKIFDG--AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA-GKL 202
              L   V++ N L+  L K G+ ++   +  +   +    N+ +++ +++GLC+   +L
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRL 239

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  ++E M   G  P +V+YN LI G  ++ G+ +  K   +F  ++  G  P   T+
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK---LFGSVLRQGYEPEVPTY 296

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LIDG  K++ ++ A ++F  +  HG+    +TY   I+GLC  G++++A+ +  +M  
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P+VV+ NA+ING CK+K V++A VL   +  +G SP+ I++NTLI   C+ G+ + 
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           A      ML RGV P V TYN L+ GL +   EG ++    + + ++  G    +VTY+ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  L K GK   A  LL     ME +   PN+ TYN LI G C   K+++A  L   ++
Sbjct: 477 LIDGLGKAGKLDDARRLLG---AMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533

Query: 500 EKGLIPNQTTYQIV-----REEMMEKGF 522
           EKG +P+  TY  +     ++EM++K  
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKAL 561



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 229/431 (53%), Gaps = 15/431 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K  K      I   +   S+SL  + +  + L+    KN +     EA     
Sbjct: 160 ALINGFCKADKLDEAQRILQRM--VSESLVPDVVTYNSLVNGLCKNGRVD---EARMLIV 214

Query: 144 DYGLKSSVLSCNQLLRALVKE-GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           D G   +V++ + L+  L +E  + E    + ++M     + ++ S+N +++GL +   +
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV 274

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           ++A  +   +   G  P+V TYNILIDG  K+  + + ++   +F  +V++G+ P+ +T+
Sbjct: 275 SEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE---LFSGLVKHGLEPDAITY 331

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
              IDG CK   +  A+ + ++M   G    VV++N++INGLC + ++DEA  L   M A
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK---EGR 379
            G  PN ++ N LI G C+    +KA   F ++ ++G+ P+V+TYN L+D  CK   EGR
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  + ++M+++G +PDV TY+ LI GL + G ++  R ++  +   G    + TYN 
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LC   K  +A+ L      M ++   P+ +TY  +I   C++  ++ A  L +  L
Sbjct: 512 LISGLCGLDKVDEALELF---VAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568

Query: 500 EKGLIPNQTTY 510
           E G++P    Y
Sbjct: 569 EAGVVPTSGMY 579



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 190/354 (53%), Gaps = 9/354 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  ++S N L+  L +E    +   ++  + R+  E  + ++N +++GL K  ++N+A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G+ P  +TY + IDG CK G   ++  A  + KDM E G +P+ V+ N +
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK++ +  A  +   M + G +   +++N+LI G C  GK  +A+    EM+  G+
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 326 KPNVVTSNALINGFCKKKL---VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           KP VVT N L++G CK +    +++A  LFD + E+G  P V+TY+ LID   K G+++D
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  +M  +G +P+V TYN LI+GL     V+    +   +V  G     +TY  ++ 
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           ALCK     KA++L D      +    P    Y  LI G C   ++++A  LL 
Sbjct: 550 ALCKQEMVDKALALFDGSL---EAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 56/367 (15%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP   T  IL+    K G   K+ KA    + ++  G L +  TFN  I G C+   I  
Sbjct: 13  SPDAYTVGILLRSLLKSG---KIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGD 68

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  VF+ M  HG     +TYN+L++GLC  G++ +A AL + M+ +G  P+VVT N L++
Sbjct: 69  AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           GFCK   +++A  +FD   ++G  P V+TYN LI+ +CK  ++++A  +   M+   ++P
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188

Query: 398 DVSTYNCLIAGLSREGNV---------------------------------EGVRNIMNE 424
           DV TYN L+ GL + G V                                 E  R ++ +
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V NG +  +V+YN L+  L ++    +A+ L   + +   E   P + TYN+LI G  +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE---PEVPTYNILIDGLLK 305

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEG 528
           + ++ +A  L + L++ GL P+  TY +                + ++M EKG +PD+  
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 529 HMYNISG 535
           H   I+G
Sbjct: 366 HNAVING 372



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 192/370 (51%), Gaps = 18/370 (4%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCS 109
           +ELR   S     +LL  +V+    P I S+   +H   +    +    +F ++      
Sbjct: 234 RELRRLES---ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE 290

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
             +   +I+ID L+    K  + +  FE F     +GL+   ++    +  L K G+ ED
Sbjct: 291 PEVPTYNILIDGLL----KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 346

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + K+M  +    ++ S N V+NGLCK  ++++A  ++  M++ G SP  +++N LI 
Sbjct: 347 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 406

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK---DENISAAMKVFEEMG 286
           G C+ G   K  KA   FK+M++ G+ P  VT+N L+DG CK   +  I  A+ +F+ M 
Sbjct: 407 GQCRAG---KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G    VVTY++LI+GL   GKLD+A  L   M A G  PNV T N+LI+G C    V+
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  LF  + E+G  P  ITY T+I A CK+  ++ A A+ +  L+ GV+P    Y  LI
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583

Query: 407 AGLSREGNVE 416
            GL     V+
Sbjct: 584 DGLCAVARVD 593



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 178/327 (54%), Gaps = 9/327 (2%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA K  G     G +  V + N L+  L+KE +  +   ++  + +  +E +  ++   +
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCKAG++  A  +++DM   G  P VV++N +I+G CK+    ++ +A+ +   M   
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK---RVDEAEVLLSGMEAK 392

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC---VDGKL 310
           G  PN ++FNTLI G C+      AM  F+EM   G+   VVTYN L++GLC    +G++
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+ L D M+  G  P+VVT +ALI+G  K   ++ AR L   +  +G  P+V TYN+L
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I   C   ++++A  +  +M+++G +PD  TY  +I+ L ++  V+    + +  +  G+
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLL 457
                 Y  L+  LC   +  +A+ LL
Sbjct: 573 VPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 14/277 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LC+   + D L++               K   + G    V+S N ++  L KE + ++
Sbjct: 336 DGLCKAGRVEDALLM--------------LKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +   M+ +    N  SFN ++ G C+AGK  KA    ++M   GV P VVTYNIL+D
Sbjct: 382 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK    G++ +A  +F  M+E G +P+ VT++ LIDG  K   +  A ++   M + G
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               V TYNSLI+GLC   K+DEA+ L   M+  G  P+ +T   +I+  CK+++V+KA 
Sbjct: 502 CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKAL 561

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            LFD   E G+ P+   Y +LID  C   R+++A  +
Sbjct: 562 ALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 221/411 (53%), Gaps = 9/411 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++   L++ Y    +              G+   +   N ++  L K GK E+     
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            E++ R ++ +  +F   + G  K GK+ +A+   ++M   G+ P    Y +LI+G+ K 
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G    + +A ++F+ +   G+LP+  T +  I G  K+  +  A+KVF E+   G+   V
Sbjct: 304 G---NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY+SLI+G C  G++++A  L DEM   G+ PN+   NAL++G CK   +++AR LFD 
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+GL P  +TY+T+ID YCK   + +AF++ + M  +GV P    YN L+ G  +EG+
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E   N+  E++  G  A  +++N L+   CK  K ++A  L  EM     ++  P+ VT
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMI---AKQIMPDHVT 536

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           Y  +I   C+ GK+E+AN L  E+ E+ LI +  T   + E+M+ KG  PD
Sbjct: 537 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVD--TVFALFEKMVAKGVKPD 585



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 238/443 (53%), Gaps = 26/443 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+  + K GK T  +  F  +      L  N+ +  +L+  + K          F+   
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+   V +C+  +  L+K G+ ++   V+ E+K + +  ++ +++ +++G CK G++ 
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA ++ ++M   G++P +  YN L+DG CK G I    +A  +F  M E G+ P+ VT++
Sbjct: 378 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI---QRARKLFDGMPEKGLEPDSVTYS 434

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+IDG+CK EN++ A  +F EM S G+      YN+L++G C +G +++A+ L  EM+  
Sbjct: 435 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 494

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G     ++ N LI+G+CK   +++A  LF ++  + + P  +TY T+ID +CK G+ME+A
Sbjct: 495 GF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 553

Query: 384 -----------------FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
                            FA+   M+ +GV PD  TY  +I    +E N+     + +E+V
Sbjct: 554 NLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 613

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             GM      +++L+ ALCK     +A  LLDEM ++  +   P++   + L++ F + G
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK---PSLAACSTLVRSFHEAG 670

Query: 487 KLEDANGLLNELLEKGLIPNQTT 509
           K+++A  +   +   GL+P+ TT
Sbjct: 671 KMDEATRVFEGVKSLGLVPDTTT 693



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 213/412 (51%), Gaps = 44/412 (10%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L FE  ++ G   LK    +C+ L+   ++EG  ++V  +   M    I +NL ++N ++
Sbjct: 31  LTFEEMQKTG---LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 87

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCK GK+ KA++I++ M +LG  P   T+ +LI+GYC++  +G   +A  +  +M + 
Sbjct: 88  HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG---RALELLDEMEKR 144

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            ++P+ V++  +I+G C  +++S A K+ E+M   G+   VV Y++LI G   +G+++EA
Sbjct: 145 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEA 204

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L D M  SG+ P++   NA+I+   K   +E+A     +I  +GL P  +T+   I  
Sbjct: 205 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 264

Query: 374 YCKEGRMEDAFAMRNSMLDR-----------------------------------GVLPD 398
           Y K G+M +A    + MLD                                    GVLPD
Sbjct: 265 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V T +  I GL + G V+    + +EL   G+   + TY+ L+   CK G+ +KA  L D
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           EM     +   PNI  YN L+ G C+ G ++ A  L + + EKGL P+  TY
Sbjct: 385 EMC---LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 208/400 (52%), Gaps = 22/400 (5%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           G+ GL  +  +   +   L +  +  + +  ++EM++  ++ + ++ + +++G  + G +
Sbjct: 2   GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 61

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           ++   I + M S G+   ++TYN+LI G CK    GKM KA  + K M+  G  PN  TF
Sbjct: 62  DEVLRIKDVMVSCGIPINLITYNVLIHGLCK---FGKMEKAAEILKGMITLGCKPNSRTF 118

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             LI+G+C++ N+  A+++ +EM    +    V+Y ++INGLC    L  A  L ++M  
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           SGLKPNVV  + LI G+  +  +E+AR L D +S  G++P +  YN +I    K G+ME+
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 238

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      +  RG+ PD  T+   I G S+ G +       +E++++G+      Y +L+ 
Sbjct: 239 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G   +A+S+   +  +      P++ T +  I G  + G++++A  + +EL EKG
Sbjct: 299 GHFKAGNLMEALSIFRHLHAL---GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355

Query: 503 LIPNQTTYQI----------------VREEMMEKGFIPDI 526
           L+P+  TY                  + +EM  KG  P+I
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 226/495 (45%), Gaps = 54/495 (10%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           Y    + +  F++ G    V  I   + +C   +  N I  ++L+    K  K     E 
Sbjct: 45  YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI--NLITYNVLIHGLCKFGKMEKAAEI 102

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K     G K +  +   L+    +E        +  EM++R +  +  S+  ++NGLC 
Sbjct: 103 LKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 162

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
              L+ A+ ++E M   G+ P VV Y+ LI GY  +G I                     
Sbjct: 163 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222

Query: 238 -----------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                      GKM +A     ++   G+ P+ VTF   I G+ K   ++ A K F+EM 
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
            HG+      Y  LING    G L EA+++   + A G+ P+V T +A I+G  K   V+
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F ++ E+GL P V TY++LI  +CK+G +E AF + + M  +G+ P++  YN L+
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL + G+++  R + + +   G+    VTY+ ++   CK     +A SL  E   M  +
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE---MPSK 459

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN----------------QTTY 510
              P+   YN L+ G C++G +E A  L  E+L+KG                    Q   
Sbjct: 460 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 519

Query: 511 QIVREEMMEKGFIPD 525
           Q+  +EM+ K  +PD
Sbjct: 520 QLF-QEMIAKQIMPD 533



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 182/375 (48%), Gaps = 22/375 (5%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  + +  N  ++  +  GLC+A ++N+A    E+M+  G+ P     + LIDG+ ++G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I ++ +   V   MV  GI  N +T+N LI G CK   +  A ++ + M + G      T
Sbjct: 61  IDEVLRIKDV---MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           +  LI G C +  +  A+ L DEM    L P+ V+  A+ING C  K +  A  L + ++
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             GL P+V+ Y+TLI  Y  EGR+E+A  + + M   GV PD+  YN +I+ LS+ G +E
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                + E+   G++   VT+   +    K GK  +A    DEM         PN   Y 
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD---HGLMPNNPLYT 294

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEK 520
           VLI G  + G L +A  +   L   G++P+  T                   V  E+ EK
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354

Query: 521 GFIPDIEGHMYNISG 535
           G +PD+  +   ISG
Sbjct: 355 GLVPDVFTYSSLISG 369



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 58/411 (14%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R LH+L V        +F+H  +KNG+      +F  L      L  +      L+  + 
Sbjct: 314 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK--EKGLVPDVFTYSSLISGFC 371

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +    FE        G+  ++   N L+  L K G  +    ++  M  + +E +  
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +++ +++G CK+  + +A  +  +M S GV P    YN L+ G CK+G    M KA  +F
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLF 488

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M++ G     ++FNTLIDG+CK   I  A ++F+EM +  I    VTY ++I+  C  
Sbjct: 489 REMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547

Query: 308 GKLDEA-----------------VALRDEMMASGLKPNVVT------------------- 331
           GK++EA                  AL ++M+A G+KP+ VT                   
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607

Query: 332 ----------------SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                            + LI   CK++ + +A  L D++ E GL PS+   +TL+ ++ 
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + G+M++A  +   +   G++PD +T   L+ G   + + E  RN++ +LV
Sbjct: 668 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 241/468 (51%), Gaps = 39/468 (8%)

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           +F + S++ H L T S++    S + ++++ AYV++         F    D G       
Sbjct: 73  QFFTSSSLLHYL-TESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNC 131

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            N LL  +V    F      + E K + + L++ SF  V+ G C+AG++ K+ D++ +++
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNESKIKVV-LDVYSFGIVIKGCCEAGEIEKSFDLLVELR 190

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGK--------------------------MYK----- 242
             G SP VV Y  LIDG CKKG I K                          ++K     
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250

Query: 243 -ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
               +++ M E+G+ PN  T+N +++  CKD     A KVF+EM   G++  +VTYN+LI
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC + K +EA  + D+M + G+ PN++T N LI+GFC  + + KA  L  D+  +GLS
Sbjct: 311 GGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS 370

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           PS++TYN L+  +CK+G    A  +   M +RG+ P   TY  LI   +R  N+E    +
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIK 480
            + +   G+   + TY++L+   C  G+  +A  L    FK   EKK+ PN V YN ++ 
Sbjct: 431 RSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL----FKSMVEKKFEPNEVIYNTMVL 486

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           G+C++G    A  L  E+ EK L PN  +Y+ + E + ++    + EG
Sbjct: 487 GYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEG 534



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 210/370 (56%), Gaps = 6/370 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++G   +V+    L+    K+G+ E  + ++ EM +  +  N  ++  +++GL K G   
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +  ++ E M+  GV P + TYN +++  CK G     +K   VF +M E G+  N VT+N
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK---VFDEMRERGVSCNIVTYN 307

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI G C++   + A +V ++M S GI   ++TYN+LI+G C   KL +A++L  ++ + 
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P++VT N L++GFCKK     A  +  ++ E+G+ PS +TY  LID + +   ME A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +R+SM + G+ PDV TY+ LI G   +G +     +   +V        V YN +V  
Sbjct: 428 IQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK+G S +A+ L  E   ME+++  PN+ +Y  +I+  C++ K ++A GL+ ++++ G+
Sbjct: 488 YCKEGSSYRALRLFRE---MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544

Query: 504 IPNQTTYQIV 513
            P+ +   ++
Sbjct: 545 GPSDSILNLI 554



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 186/319 (58%), Gaps = 3/319 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +L+    KN     GFE +++  ++G+  ++ + N ++  L K+G+ +D  
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAF 288

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V+ EM+ R +  N+ ++N ++ GLC+  K N+A+++M+ MKS G++P ++TYN LIDG+
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C   G+ K+ KA ++ +D+   G+ P+ VT+N L+ GFCK  + S A KV +EM   GI 
Sbjct: 349 C---GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+       +++A+ LR  M   GL P+V T + LI+GFC K  + +A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E+   P+ + YNT++  YCKEG    A  +   M ++ + P+V++Y  +I  L +
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 412 EGNVEGVRNIMNELVNNGM 430
           E   +    ++ +++++G+
Sbjct: 526 ERKSKEAEGLVEKMIDSGI 544



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 178/322 (55%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F   G +GL ++  +   L+  L K G  +    +Y++M+   +  NL ++N V+N LCK
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCK 280

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+   A  + ++M+  GVS  +VTYN LI G C++    K  +A+ V   M  +GI PN
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE---MKANEANEVMDQMKSDGINPN 337

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+NTLIDGFC    +  A+ +  ++ S G++  +VTYN L++G C  G    A  +  
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   G+KP+ VT   LI+ F +   +EKA  L   + E GL+P V TY+ LI  +C +G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           RM +A  +  SM+++   P+   YN ++ G  +EG+      +  E+    +   + +Y 
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            ++  LCK+ KSK+A  L+++M
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKM 539



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 26/184 (14%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y  +I+AY +   ++ +    N M+D+G +P  + +N L+  +    +        NE  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-- 154

Query: 427 NNGMRAGLVTYN--ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            + ++  L  Y+  I++   C+ G+ +K+  LL E+ +       PN+V Y  LI G C+
Sbjct: 155 -SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFS---PNVVIYTTLIDGCCK 210

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEG 528
           KG++E A  L  E+ + GL+ N+ TY ++                 E+M E G  P++  
Sbjct: 211 KGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL-- 268

Query: 529 HMYN 532
           H YN
Sbjct: 269 HTYN 272



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 378 GRMEDAFAMRNSMLDRGVLPDVST-----YNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           G+++  F   +S+L      + S      Y  +I    +  +++      NE+V+ G   
Sbjct: 68  GKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           G   +N L+  +       +     +E     K K   ++ ++ ++IKG C+ G++E + 
Sbjct: 128 GSNCFNNLLTFVVGSSSFNQWWCFFNE----SKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            LL EL E G  PN   Y  + +   +KG I
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 218/406 (53%), Gaps = 23/406 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ ++  +CN  +R L ++G+ E+   + + M    +  ++ ++N ++ GLCK  K+ +A
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEA 299

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +  +  M + G  P   TYN +IDGYCK G    + +A  + KD V  G +P+ VT+ +L
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSG---MLQEATELLKDAVFKGFVPDRVTYCSL 356

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C + +I  A+++F E  +  +   +V YNSL+ GLC  G +  A+ + +EM+  G 
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T N +ING CK   +  A V+ +D   +G  P V T+NTLID YCK  +++ A  
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G+ PDV TYN ++ GL + G  + V     E++  G R   +TYNIL+   C
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  + ++A  ++    +M ++   P+ V++N LI GFC+ G L+ A  L  +L EKG   
Sbjct: 537 KINQLEEASGVI---VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA 593

Query: 506 NQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
              T+ I                +  EM+ KG+ PD+  +   + G
Sbjct: 594 TADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 217/415 (52%), Gaps = 42/415 (10%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           +PH+     +   + G  +   +   ++R L   G   +  +++ EM  R +  ++ +FN
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 191 FVLN-----------------------------------GLCKAGKLNKASDIMEDMKSL 215
            VL+                                   GLC+ G+L +A  ++E M + 
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
            V+P VVTYN L+ G CK     K+ +A      M+  G +P++ T+NT+IDG+CK   +
Sbjct: 276 -VAPDVVTYNTLMRGLCKD---SKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGML 331

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A ++ ++    G     VTY SLINGLC +G ++ A+ L +E  A  LKP++V  N+L
Sbjct: 332 QEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           + G C++ L+  A  + +++ E+G  P + TYN +I+  CK G + DA  + N  + +G 
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           LPDV T+N LI G  +   ++    ++  +   G+   ++TYN ++  LCK GK+K+   
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             +EM     +   PN +TYN+LI+ FC+  +LE+A+G++  + + GL+P+  ++
Sbjct: 512 TFEEMI---LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSF 563



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 202/379 (53%), Gaps = 18/379 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L  EG  E    ++ E + + ++ +L  +N ++ GLC+ G +  A  +M +M   G
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P + TYNI+I+G CK G I     A  V  D +  G LP+  TFNTLIDG+CK   + 
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISD---AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLD 472

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           +A+++ E M ++GIA  V+TYNS++NGLC  GK  E     +EM+  G +PN +T N LI
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 532

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             FCK   +E+A  +   + + GL P  +++NTLI  +C+ G ++ A+ +   + ++G  
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
               T+N LI   S + N++    I  E+++ G +  L TY ILV  LCK     +A + 
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ--------- 507
           L EM     +   P++ T+  ++       ++ +A  +++ ++  G++P           
Sbjct: 653 LAEMI---SKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDK 709

Query: 508 ---TTYQIVREEMMEKGFI 523
                 +I+ EE+M+KG I
Sbjct: 710 KEIAAPKILVEELMKKGHI 728



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 222/474 (46%), Gaps = 30/474 (6%)

Query: 72  SLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI--IIDMLMLAYVKN 129
           S + A   P  R+ +   V  G+   V     AL++    L  +S+  +    + AY + 
Sbjct: 28  SELTASTIPAYRALIRELVSAGRLDDVDA---ALASARSHLAPDSLQPLYVASIQAYARA 84

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            +     +AF+R   +    +  + N ++ ALV     +    VY  M    +  +  + 
Sbjct: 85  GRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTH 144

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
              L   C  G+ + A  ++  +   G   K   Y  ++ G       G  Y A  +F +
Sbjct: 145 TVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAH---GHGYNARHLFDE 201

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+   + P+  TFN ++   C+  ++  +  +  ++   G++A   T N  I GLC DG+
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+EAVAL  E M + + P+VVT N L+ G CK   V++A      +  QG  P   TYNT
Sbjct: 262 LEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID YCK G +++A  +    + +G +PD  TY  LI GL  EG++E    + NE     
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  LV YN LV  LC+ G    A+ +++EM    +E   P+I TYN++I G C+ G + 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMV---EEGCHPDIWTYNIIINGLCKMGNIS 437

Query: 490 DANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIPDI 526
           DA  ++N+ + KG +P+  T+                 Q+V E M   G  PD+
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWTYGIAPDV 490



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 11/381 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F  A    LK  ++  N L++ L ++G       V  EM       ++ ++N ++N
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLCK G ++ A+ +M D    G  P V T+N LIDGYCK+    K+  A  + + M   G
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR---LKLDSALQLVERMWTYG 485

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ +T+N++++G CK        + FEEM   G     +TYN LI   C   +L+EA 
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M   GL P+ V+ N LI+GFC+   ++ A +LF  + E+G S +  T+N LI AY
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             +  M+ A  +   M+ +G  PD+ TY  L+ GL +  NV+     + E+++ G    +
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSM 665

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            T+  ++  L  + +  +AV+++  M +M      P +V  + ++     K ++     L
Sbjct: 666 ATFGRMLNLLAMNHRVSEAVAIIHIMVRM---GVVPEVV--DTILS--TDKKEIAAPKIL 718

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           + EL++KG I +   Y+++ E
Sbjct: 719 VEELMKKGHI-SYRAYEVLHE 738



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 182/406 (44%), Gaps = 34/406 (8%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV----LNGLCKAGKLNK 204
           S++ +   L+R LV  G+ +DV+     +   R  L  DS   +    +    +AG+L  
Sbjct: 33  STIPAYRALIRELVSAGRLDDVD---AALASARSHLAPDSLQPLYVASIQAYARAGRLRA 89

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A D  E M      P    YN ++D         + +K   V+  M+  G+ P+  T   
Sbjct: 90  AVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHK---VYVRMLAAGVAPDARTHTV 146

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            +  FC       A+++   +   G  A    Y +++ GL   G    A  L DEM+   
Sbjct: 147 RLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRD 206

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+V T N +++  C+K  V ++  L   + ++G+S +  T N  I   C++GR+E+A 
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           A+   M    V PDV TYN L+ GL ++  V+     +  ++N G      TYN ++   
Sbjct: 267 ALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325

Query: 445 CKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           CK G  ++A  LL D +FK       P+ VTY  LI G C +G +E A  L NE   K L
Sbjct: 326 CKSGMLQEATELLKDAVFK----GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
            P+   Y                  V  EM+E+G  PDI    YNI
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI--WTYNI 425



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 16/313 (5%)

Query: 63  LLLTGRLLHSLVVAKK------YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-- 114
           L   G +LH+L V  +      +P I ++    + NG    +  I  A    +D++ +  
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTY--NIIING-LCKMGNISDAAVVMNDAIVKGY 451

Query: 115 --NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
             +    + L+  Y K +K     +  +R   YG+   V++ N +L  L K GK ++V  
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
            ++EM  +    N  ++N ++   CK  +L +AS ++  M   G+ P  V++N LI G+C
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           + G +   Y    +F+ + E G      TFN LI  +    N+  A K+F EM S G   
Sbjct: 572 RNGDLDGAY---LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            + TY  L++GLC    +D A A   EM++ G  P++ T   ++N       V +A  + 
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688

Query: 353 DDISEQGLSPSVI 365
             +   G+ P V+
Sbjct: 689 HIMVRMGVVPEVV 701


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 214/396 (54%), Gaps = 23/396 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   +   N ++  L K GK E+      E++ R ++ +  +F   + G  K GK+ +A
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +   ++M   G+ P    Y +LI+G+ K G    + +A ++F+ +   G+LP+  T +  
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAG---NLMEALSIFRHLHALGVLPDVQTCSAF 530

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  K+  +  A+KVF E+   G+   V TY+SLI+G C  G++++A  L DEM   G+
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+   NAL++G CK   +++AR LFD + E+GL P  +TY+T+ID YCK   + +AF+
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  +GV P    YN L+ G  +EG++E   N+  E++  G  A  +++N L+   C
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC 709

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  K ++A  L  EM     ++  P+ VTY  +I   C+ GK+E+AN L  E+ E+ LI 
Sbjct: 710 KSCKIQEASQLFQEMI---AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 766

Query: 506 NQTTYQ----------------IVREEMMEKGFIPD 525
           +  TY                  + E+M+ KG  PD
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 802



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 238/461 (51%), Gaps = 44/461 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+  + K GK T  +  F  +      L  N+ +  +L+  + K          F+   
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+   V +C+  +  L+K G+ ++   V+ E+K + +  ++ +++ +++G CK G++ 
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA ++ ++M   G++P +  YN L+DG CK G I    +A  +F  M E G+ P+ VT++
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI---QRARKLFDGMPEKGLEPDSVTYS 633

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+IDG+CK EN++ A  +F EM S G+      YN+L++G C +G +++A+ L  EM+  
Sbjct: 634 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 693

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G     ++ N LI+G+CK   +++A  LF ++  + + P  +TY T+ID +CK G+ME+A
Sbjct: 694 GFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 752

Query: 384 -----------------------------------FAMRNSMLDRGVLPDVSTYNCLIAG 408
                                              FA+   M+ +GV PD  TY  +I  
Sbjct: 753 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 812

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             +E N+     + +E+V  GM      +++L+ ALCK     +A  LLDEM ++  +  
Sbjct: 813 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK-- 870

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            P++   + L++ F + GK+++A  +   +   GL+P+ TT
Sbjct: 871 -PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 259/548 (47%), Gaps = 43/548 (7%)

Query: 13  TELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           T ++ +H  SKL       V+ Q  N   DP  +L +F WS  ++     L     L   
Sbjct: 56  TIMVSSHIPSKLNPDVIRAVLHQ--NQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQ 113

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L  ++ +      L   ++   ++S S +   L    +    + ++ D+L+ +Y +    
Sbjct: 114 LCNSELFGLANGVLTQMIRT-PYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGML 172

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQL------------------LRALVKEGKFEDVEYVY 174
                 F  A +  +  S++ CN L                     L +  +  + +  +
Sbjct: 173 DEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTF 232

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM++  ++ + ++ + +++G  + G +++   I + M S G+   ++TYN+LI G CK 
Sbjct: 233 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK- 291

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GKM KA  + K M+  G  PN  TF  LI+G+C++ N+  A+++ +EM    +    
Sbjct: 292 --FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 349

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V+Y ++INGLC    L  A  L ++M  SGLKPNVV  + LI G+  +  +E+AR L D 
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 409

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S  G++P +  YN +I    K G+ME+A      +  RG+ PD  T+   I G S+ G 
Sbjct: 410 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +       +E++++G+      Y +L+    K G   +A+S+   +  +      P++ T
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL---GVLPDVQT 526

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMM 518
            +  I G  + G++++A  + +EL EKGL+P+  TY                  + +EM 
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 586

Query: 519 EKGFIPDI 526
            KG  P+I
Sbjct: 587 LKGIAPNI 594



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 211/432 (48%), Gaps = 9/432 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R LH+L V        +F+H  +KNG+      +F  L      L  +      L+  + 
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK--EKGLVPDVFTYSSLISGFC 570

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +    FE        G+  ++   N L+  L K G  +    ++  M  + +E +  
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +++ +++G CK+  + +A  +  +M S GV P    YN L+ G CK+G    M KA  +F
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLF 687

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M++ G     ++FNTLIDG+CK   I  A ++F+EM +  I    VTY ++I+  C  
Sbjct: 688 REMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 746

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK++EA  L  EM    L  + VT  +L+ G+ K     +   LF+ +  +G+ P  +TY
Sbjct: 747 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 806

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             +I A+CKE  + +AF +R+ ++ +G+L   + ++ LI  L +  ++     +++E+  
Sbjct: 807 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  L   + LV +  + GK  +A  + + +  +      P+  T   L+ G      
Sbjct: 867 LGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSL---GLVPDTTTLIDLVNGNLNDTD 923

Query: 488 LEDANGLLNELL 499
            EDA  L+ +L+
Sbjct: 924 SEDARNLIKQLV 935



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 184/401 (45%), Gaps = 46/401 (11%)

Query: 157 LLRALVKEGKFED----VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           ++RA++ + +  D    +++ Y    +  +   LDSF+ +   LC +     A+ ++  M
Sbjct: 71  VIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQM 130

Query: 213 ------------------KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
                             ++ G S  VV ++ILID Y +   +G + +A  VF     + 
Sbjct: 131 IRTPYSSSSILDSVLFWFRNYGGSSPVV-FDILIDSYKR---MGMLDEAANVFFVAKNDS 186

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           IL + +  N+L                   MG  G+     TY  +  GLC   +++EA 
Sbjct: 187 ILISLIRCNSL-----------------RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAK 229

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
              +EM  +GLKP+    +ALI+GF ++  +++   + D +   G+  ++ITYN LI   
Sbjct: 230 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 289

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G+ME A  +   M+  G  P+  T+  LI G  RE N+     +++E+    +    
Sbjct: 290 CKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 349

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y  ++  LC       A  LL+   KM      PN+V Y+ LI G+  +G++E+A  L
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLE---KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           L+ +   G+ P+   Y  +   + + G + +   ++  I G
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 447


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL     +   L+    +    ++   V+  M ++  + N  S+  +++GLC+AG++N+A
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  DM      P V TY +LI       G G+  +A  +F +M E G  PN  T+  L
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYAL---SGSGRKVEALNLFNEMKEKGCEPNVHTYTVL 340

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK+  +  A K+  EM   G+   VVTYN+LI+G C +G +D+A  + D M ++  
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N LI G CKK+ V KA  L + + E+ LSPS+ITYN+LI   CK   +E A+ 
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M + G++PD  TY+  I  L +EG VE    + + +   G++A  V Y  L+   C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK   A SLL+ M     +   PN  TYNVLI+G C++ K+++A+ L+ ++L  G+ P
Sbjct: 521 KVGKIDVAYSLLERML---NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 506 NQTTYQIVREEMMEKG 521
              TY I+  EM++ G
Sbjct: 578 TVVTYTILIGEMLKDG 593



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 204/357 (57%), Gaps = 6/357 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL   G+  +   ++ EMK +  E N+ ++  +++GLCK  K+++A  ++ +M   G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVTYN LIDGYCK+G I   ++   +   M  N   PN  T+N LI G CK   + 
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFE---ILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            AM +  +M    ++  ++TYNSLI+G C    L+ A  L   M  +GL P+  T +  I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +  CK+  VE+A  LFD +  +G+  + + Y  LID YCK G+++ A+++   ML+   L
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN LI GL +E  ++   +++ +++  G++  +VTY IL+G + KDG    A+ +
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + M  +  +   P++ TY   +  +  +G LE+ + ++ ++ E+G++P+  TY ++
Sbjct: 602 FNHMVSLGYQ---PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 224/430 (52%), Gaps = 22/430 (5%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +N      +E F      G + + +S   L+  L + G+  +   ++ +M    
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               + ++  ++  L  +G+  +A ++  +MK  G  P V TY +LIDG CK+    KM 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE---NKMD 351

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  +  +M E G++P+ VT+N LIDG+CK+  I  A ++ + M S+       TYN LI
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC   K+ +A+AL ++M+   L P+++T N+LI+G CK   +E A  L   ++E GL 
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY+  ID  CKEGR+E+A  + +S+  +GV  +   Y  LI G  + G ++   ++
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  ++N+       TYN+L+  LCK+ K K+A SL+ +M  M  +   P +VTY +LI  
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK---PTVVTYTILIGE 588

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY---------QIVREE-------MMEKGFIPD 525
             + G  + A  + N ++  G  P+  TY         Q + EE       M E+G +PD
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 526 IEGHMYNISG 535
           +  +   I G
Sbjct: 649 LVTYTVLIDG 658



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 202/365 (55%), Gaps = 12/365 (3%)

Query: 167 FEDVEYVYKEMKRR------RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
            EDV +V +  ++       + +  L  +N +L  L K   +++   +  ++ +  +SP 
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           + T+N +++GYCK   IG + +A+     +V+ G+ P+  T+ +LI G C+++ +  A +
Sbjct: 194 IYTFNAMVNGYCK---IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           VF  M   G     V+Y +LI+GLC  G+++EA+ L  +M      P V T   LI    
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
                 +A  LF+++ E+G  P+V TY  LID  CKE +M++A  M + M ++G++P V 
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN LI G  +EG ++    I++ + +N       TYN L+  LCK  K  KA++LL+  
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN-- 428

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            KM + K  P+++TYN LI G C+   LE A  LL+ + E GL+P+Q TY +  + + ++
Sbjct: 429 -KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 521 GFIPD 525
           G + +
Sbjct: 488 GRVEE 492



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 239/527 (45%), Gaps = 78/527 (14%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           P +R++   ++    +G+      +F+ +    C  ++   +++ID L     K  K   
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL----CKENKMDE 352

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +      + GL  SV++ N L+    KEG  +D   +   M+      N  ++N ++ 
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLCK  K++KA  ++  M    +SP ++TYN LI G CK   +   Y+   +   M ENG
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR---LLSLMNENG 469

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           ++P++ T++  ID  CK+  +  A  +F+ + + G+ A  V Y +LI+G C  GK+D A 
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L + M+     PN  T N LI G CK+K +++A  L   +   G+ P+V+TY  LI   
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K+G  + A  + N M+  G  PDV TY   +     +G +E V +++ ++   G+   L
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF--------------------------------- 461
           VTY +L+    + G + +A   L  M                                  
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709

Query: 462 -----------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                            KM +     ++  Y  LI GFCQ+ +LE+A GL++ + E+G+ 
Sbjct: 710 DSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 769

Query: 505 PNQTTY--------------QIVR--EEMMEKGFIPDIEGHMYNISG 535
           P++  Y              + VR  + M+E G +P +E +   + G
Sbjct: 770 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCG 816



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 216/423 (51%), Gaps = 8/423 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H   + G+      +F  ++   D+ C       +L+ A   + +       F    
Sbjct: 269 NLIHGLCEAGRINEALKLFADMT--EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G + +V +   L+  L KE K ++   +  EM  + +  ++ ++N +++G CK G ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I++ M+S    P   TYN LI G CKK    K++KA A+   M+E  + P+ +T+N
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKK---RKVHKAMALLNKMLERKLSPSLITYN 443

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI G CK  ++ +A ++   M  +G+     TY+  I+ LC +G+++EA  L D + A 
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+K N V   ALI+G+CK   ++ A  L + +      P+  TYN LI+  CKE +M++A
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            ++   ML  GV P V TY  LI  + ++G  +    + N +V+ G +  + TY   + A
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
               G  ++     D + KM +E   P++VTY VLI G+ + G    A   L  +++ G 
Sbjct: 624 YFSQGMLEEVD---DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 504 IPN 506
            P+
Sbjct: 681 KPS 683



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 212/492 (43%), Gaps = 88/492 (17%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+S   N+   + L+    K  K H       +  +  L  S+++ N L+    K    E
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M    +  +  +++  ++ LCK G++ +A  + + +K+ GV    V Y  LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK   +GK+  A ++ + M+ +  LPN  T+N LI+G CK++ +  A  +  +M + 
Sbjct: 517 DGYCK---VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   VVTY  LI  +  DG  D A+ + + M++ G +P+V T  A ++ +  + ++E+ 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP----------- 397
             +   ++E+G+ P ++TY  LID Y + G    AF     M+D G  P           
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693

Query: 398 ------------------------------------------DVSTYNCLIAGLSREGNV 415
                                                     DVS Y  LIAG  ++  +
Sbjct: 694 LSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 753

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-----------FKM- 463
           E  + +++ +   GM      YN L+   CK G   +AV L+D M           +K+ 
Sbjct: 754 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813

Query: 464 ----------EKEKKW----------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
                     EK K             + V + VLI G  ++  +++ + L++ + EKG 
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873

Query: 504 IPNQTTYQIVRE 515
            PN  TY ++ E
Sbjct: 874 QPNPLTYSLLIE 885



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 195/416 (46%), Gaps = 26/416 (6%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           F+    K G+     T+F ++   +  +  N +I   L+  Y K  K  + +   +R  +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVK--AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
                +  + N L+  L KE K ++   +  +M    ++  + ++  ++  + K G  + 
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  +   M SLG  P V TY   +  Y  +G    + + D V   M E GILP+ VT+  
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG---MLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE------------ 312
           LIDG+ +      A    + M   G    +   + LI  L  + ++ E            
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 313 ------AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
                 A+ L ++M+  G   +V    ALI GFC+++ +E+A+ L   + E+G+SPS   
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN+L+D  CK G   +A  + ++M++ G+LP + +Y  L+ GL  EG+ E  + + + L+
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + G     V + +L+  L K     +   L+D    ME++   PN +TY++LI+G 
Sbjct: 835 SCGYNYDEVAWKVLIDGLLKRDLVDECSELID---IMEEKGCQPNPLTYSLLIEGL 887



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 146/353 (41%), Gaps = 50/353 (14%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           +D+   NS   ++L+    K  K         +    G+K +V++   L+  ++K+G F+
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               V+  M     + ++ ++   L+     G L +  D++  M   G+ P +VTY +LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 229 DGYCKKGGIGKMYK---------------------------------------------- 242
           DGY + G   + +                                               
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTL 716

Query: 243 ----ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
               A  +F+ MVE+G   +   +  LI GFC+ E +  A  +   M   G++     YN
Sbjct: 717 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 776

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           SL++  C  G   EAV L D M+ +GL P + +   L+ G   +   EKA+ +F  +   
Sbjct: 777 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 836

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           G +   + +  LID   K   +++   + + M ++G  P+  TY+ LI GL R
Sbjct: 837 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 228/444 (51%), Gaps = 60/444 (13%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G E F+   + G    V++ N L+ +L K G  E+   ++ +M  R    N+ +++ ++N
Sbjct: 235 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLIN 294

Query: 195 GLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYCKKG----------------- 235
           GLCK G++++A +++++M  KS  V P ++TYN  +DG CK+                  
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 354

Query: 236 -----------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
                              G++ +A +VF DM+  G +PN +T+N L++G CK + +  A
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
             + E M   G+   V+TY+ L++  C   ++DEA+ L   M + G  PNVVT N++I+G
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474

Query: 339 FCKKKLVEKARVLFDDIS-EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            CK     +A  +FDD++ + GL P  ITY TLID   + GR   A A+ ++M D    P
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----P 530

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D   +NC I GLS+ G+V     + N ++   +    VT+NIL+   CK G  ++A +L 
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---- 513
           +EM     +   P+++T+  LI G C+ G++E A  +L+ +   G+ PN  TY  +    
Sbjct: 591 EEMVAKNLQ---PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647

Query: 514 ------------REEMMEKGFIPD 525
                        EEM+  G +PD
Sbjct: 648 CKSGRIEEACQFLEEMVSSGCVPD 671



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 229/411 (55%), Gaps = 36/411 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  ++++ N ++  L K  +      +++E+  R    ++ ++N +++ LCKAG L +A
Sbjct: 211 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 270

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTFN 263
             +  DM S    P VVTY++LI+G CK   +G++ +A  + ++M      +LPN +T+N
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCK---VGRIDEARELIQEMTRKSCDVLPNIITYN 327

Query: 264 TLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + +DG CK    + A ++   +  GS  ++   VT+++LI+GLC  G++DEA ++ D+M+
Sbjct: 328 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A G  PNV+T NAL+NG CK   +E+A  + + + ++G++P VITY+ L+DA+CK  R++
Sbjct: 388 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 447

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNIL 440
           +A  + + M  RG  P+V T+N +I GL +         + +++ + +G+    +TY  L
Sbjct: 448 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTL 507

Query: 441 VGALCKDGKSKKAVSLLDEMF----------------------------KMEKEKKWPNI 472
           +  L + G++ +A +LLD M                             +M + +  P+ 
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDK 567

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           VT+N+LI G C+ G  E A+ L  E++ K L P+  T+  + + + + G +
Sbjct: 568 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 618



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/403 (33%), Positives = 212/403 (52%), Gaps = 27/403 (6%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R G   +    ++ + L+  L K G+ ++   V+ +M       N+ ++N ++NGLCKA 
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           K+ +A  ++E M   GV+P V+TY++L+D +CK     ++ +A  +   M   G  PN V
Sbjct: 410 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA---SRVDEALELLHGMASRGCTPNVV 466

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           TFN++IDG CK +    A ++F++M   HG+    +TY +LI+GL   G+  +A AL D 
Sbjct: 467 TFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDA 526

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M      P+    N  ING  K   V +A  +++ + E  L P  +T+N LI   CK G 
Sbjct: 527 MP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN 582

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            E A A+   M+ + + PDV T+  LI GL + G VE  R+I++ + N G+   +VTYN 
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV  LCK G+ ++A   L+EM         P+ +TY  L+   C+  + +DA  L++EL 
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMV---SSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 500 EKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
             G  P+  TY I                V EEM+ KG  PD+
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDV 742



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 237/477 (49%), Gaps = 54/477 (11%)

Query: 97  SVSTIFHALSTCS--DSLCRNSIIIDMLMLAYVKNMKPHLGF-------EAFKRAG---- 143
           + ST+   L  C   D  C  S+  DM+   YV N+  +          +  +RA     
Sbjct: 362 TFSTLIDGLCKCGQIDEAC--SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419

Query: 144 ---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
              D G+   V++ + L+ A  K  + ++   +   M  R    N+ +FN +++GLCK+ 
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 479

Query: 201 KLNKASDIMEDMK-SLGVSPKVVTYNILIDGYCKKG------------------------ 235
           +  +A  + +DM    G+ P  +TY  LIDG  + G                        
Sbjct: 480 RSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCI 539

Query: 236 ----GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                +G + +A  V+  M+E  ++P++VTFN LI G CK  N   A  +FEEM +  + 
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+T+ +LI+GLC  G+++ A  + D M   G+ PNVVT NAL++G CK   +E+A   
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++   G  P  ITY +L+ A C+  R +DA  + + +   G  PD  TYN L+ GL +
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G  E    ++ E+V  G    +VTYN L+ +LCK G  ++A  L  +M         PN
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKG--LIPNQTTYQ-----IVREEMMEKG 521
           +VTY+VLI G C+ G++++A  L+ E++ K   ++PN  TY      + ++ MM + 
Sbjct: 780 VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 247/488 (50%), Gaps = 38/488 (7%)

Query: 69   LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
            L+ +L V        + +H   K+G+          +   S     +SI    L+ A  +
Sbjct: 627  LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV--SSGCVPDSITYGSLVYALCR 684

Query: 129  NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
              +     +       +G     ++ N L+  L K G+ E    V +EM  +    ++ +
Sbjct: 685  ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 189  FNFVLNGLCKAGKLNKASDIMEDMKSL---GVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
            +N +++ LCKAG L +A  +  DM S       P VVTY++LI+G CK   +G++ +A  
Sbjct: 745  YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK---VGRIDEARE 801

Query: 246  VFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLI 301
            + ++M+     +LPN +T+N+ +DG CK   ++ A ++   +  GS  ++   VT+++LI
Sbjct: 802  LIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 302  NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            +GLC  G+ DEA  + D+M+A G  PNVVT N L+NG CK   +E+A  + + + ++G++
Sbjct: 862  DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921

Query: 362  PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
            P VITY+ L+DA+CK   +++A  + + M  RG  P+V T+N +I GL +         +
Sbjct: 922  PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981

Query: 422  MNEL-VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------------- 460
             +++ + +G+    +TY  L+  L + G + +A  LLD M                    
Sbjct: 982  FDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGD 1041

Query: 461  -----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
                  +M + +  P+ VT+N+LI G C+ G  E A+ L  E++ K L P+  T+  + +
Sbjct: 1042 VSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 1101

Query: 516  EMMEKGFI 523
             + + G +
Sbjct: 1102 GLCKAGQV 1109



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/364 (34%), Positives = 203/364 (55%), Gaps = 24/364 (6%)

Query: 137  EAFKRAGDYGLKSS------VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL--NLDS 188
            EA +  GD   + S      V++ + L+  L K G+ ++   + +EM R+  ++  N+ +
Sbjct: 760  EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 189  FNFVLNGLCKAGKLNKASDIMEDMK--SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +N  L+GLCK   + +A ++M  ++  SL VSP  VT++ LIDG CK    G+  +A  V
Sbjct: 820  YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK---CGQTDEACNV 876

Query: 247  FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            F DM+  G +PN VT+N L++G CK + +  A  + E M   G+   V+TY+ L++  C 
Sbjct: 877  FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 936

Query: 307  DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS-EQGLSPSVI 365
               +DEA+ L   M + G  PNVVT N++I+G CK     +A  +FDD++ + GL+P  I
Sbjct: 937  ASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKI 996

Query: 366  TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            TY TLID   + G    A  + ++M D    PD   +NC I GLS+ G+V    + M EL
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRMLEL 1052

Query: 426  VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
                +    VT+NIL+   CK G  ++A +L +EM     +   P+++T+  LI G C+ 
Sbjct: 1053 ---ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ---PDVMTFGALIDGLCKA 1106

Query: 486  GKLE 489
            G++E
Sbjct: 1107 GQVE 1110



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 213/409 (52%), Gaps = 43/409 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K ++ S N+ L  LVK G       +++     R   N  +++ +L    KAG     
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG----- 160

Query: 206 SDIMEDMKSLG-------VSPKVVTYNILIDGYCKKGGIGKMYKADAVFK-DMVENGILP 257
            D+    ++LG        S  V  YNI++   C+ G   +  +A  +F+ +M  +G+ P
Sbjct: 161 GDVE---RTLGFFRRIRSSSRSVADYNIVLQSLCRAG---ETARALEIFRGEMARDGVAP 214

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
             VT+NT+I+G CK   + A M++FEE+   G    VVTYN+LI+ LC  G L+EA  L 
Sbjct: 215 TIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH 274

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYC 375
            +M +    PNVVT + LING CK   +++AR L  +++ +     P++ITYN+ +D  C
Sbjct: 275 GDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC 334

Query: 376 KEGRMEDAFAMRNSMLDRG--VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           K+    +A  +  S+ D    V PD  T++ LI GL + G ++   ++ ++++  G    
Sbjct: 335 KQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPN 394

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           ++TYN LV  LCK  K ++A ++++ M     +   P+++TY+VL+  FC+  ++++A  
Sbjct: 395 VITYNALVNGLCKADKMERAHAMIESMV---DKGVTPDVITYSVLVDAFCKASRVDEALE 451

Query: 494 LLNELLEKGLIPNQTT-----------------YQIVREEMMEKGFIPD 525
           LL+ +  +G  PN  T                 +Q+  +  ++ G +PD
Sbjct: 452 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 159/303 (52%), Gaps = 34/303 (11%)

Query: 151  VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF--VLNGLCKAGKLNKASDI 208
            +++ N  L  L K+    +   + + ++   + ++ D+  F  +++GLCK G+ ++A ++
Sbjct: 817  IITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876

Query: 209  MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
             +DM + G  P VVTYN+L++G CK     KM +A A+ + MV+ G+ P+ +T++ L+D 
Sbjct: 877  FDDMIAGGYVPNVVTYNVLMNGLCKTD---KMERAHAMIESMVDKGVTPDVITYSVLVDA 933

Query: 269  FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKP 327
            FCK  ++  A+++   M S G    VVT+NS+I+GLC   +  EA  + D+M +  GL P
Sbjct: 934  FCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAP 993

Query: 328  NVVTSNALINGFCKKKLVEKARVLFD---------------------DIS-------EQG 359
            + +T   LI+G  +     +A VL D                     D+S       E  
Sbjct: 994  DKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE 1053

Query: 360  LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            L P  +T+N LI   CK G  E A A+   M+ + + PDV T+  LI GL + G VE   
Sbjct: 1054 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113

Query: 420  NIM 422
            +IM
Sbjct: 1114 DIM 1116



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 26/223 (11%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            N +  ++LM    K  K        +   D G+   V++ + L+ A  K    ++   + 
Sbjct: 888  NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK-SLGVSPKVVTYNILIDGYCK 233
              M  R    N+ +FN +++GLCK+ +  +A  + +DM    G++P  +TY  LIDG  +
Sbjct: 948  HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFR 1007

Query: 234  KG-------------------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
             G                         G+ K+         M+E  ++P++VTFN LI G
Sbjct: 1008 TGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAG 1067

Query: 269  FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
             CK  N   A  +FEEM +  +   V+T+ +LI+GLC  G+++
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 204/377 (54%), Gaps = 13/377 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F R G++G K +V   N LL AL+ E KF+ +  +Y  MK+  +  N+ ++N +L 
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  +++ A  +  +M + G  P  VTY  ++   CK G I    +    FK      
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK------ 241

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+   +N LIDG CK+  I  A+K+  EM  +G+   VV+Y+ +IN LCV G ++ A 
Sbjct: 242 --PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 315 ALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           AL  +M   G   N+ T   LI G F + KL E A  L+  + + G  P+V+ YNTLI  
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G +E+A  + + M   G LP+V+TY+ LI G ++ G++ G     N ++++G R  
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY  +V  LCK+    +A SL++   KM  E   PN +T+N  IKG C  G++E A  
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVE---KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 494 LLNELLEKGLIPNQTTY 510
           LL  +   G +PN TTY
Sbjct: 476 LLERMQGHGCLPNITTY 492



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+  +V+S + ++ +L   G  E    ++ +M  R  + N+ +F  ++ G    GKL 
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY 331

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D+ + M   G  P VV YN LI G C  G    + +A  V   M  +G LPN  T++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG---SLEEALQVCDQMQRSGCLPNVTTYS 388

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDGF K  ++  A + +  M SHG    VVTY  +++ LC +   D+A +L ++M   
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN +T N  I G C    VE A  L + +   G  P++ TYN L+DA  +  + E+A
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F +   +  R + P++ TYN ++ G SR G +     +  + +  G     +TYN ++ A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            CK GK K A  L++ +  M   K+W P+I+TY  LI G C    +E+A   L++ + +G
Sbjct: 569 YCKQGKVKIAAQLVERVSSM---KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625

Query: 503 LIPNQTTY 510
           + PN  T+
Sbjct: 626 ICPNFATW 633



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 11/334 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++  L +  +++    I++ MK  G++     +  +I+GY +   +G   +A  +F
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKR---VGSAEQALKMF 132

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             + E G  P    +N L+D    +        ++  M   G+   V TYN L+  LC +
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            ++D A  L  EM   G  P+ VT   +++  CK   ++ AR L          PSV  Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVY 247

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LID  CKEGR+E A  +   M+D GV P+V +Y+C+I  L   GNVE    +  ++  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G  A + T+  L+      GK  +A+ L   M +   E   PN+V YN LI G C  G 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE---PNVVAYNTLIHGLCSNGS 364

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           LE+A  + +++   G +PN TTY I+ +   + G
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 7/225 (3%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + ++  M     KN  F   +++   ++   +    N+I  +  +     N +     
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTL--EGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  +R   +G   ++ + N+LL AL +  K+E+   +++E++ R ++ NL ++N VL G 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            +AG + +A  +       G +P  +TYN +I  YCK+G +    +       M E    
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WH 592

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           P+ +T+ +LI G C   NI  AM   ++  + GI     T+N+L+
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 223/434 (51%), Gaps = 54/434 (12%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKL 202
           ++G   S +S N ++    KEG+ ED     +EM  +     +  +FN ++NGLCKAG +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------- 237
             A +IM+ M   G  P V TYN +I G CK G +                         
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371

Query: 238 -------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                   ++ +A  + + +   GILP+  TFN+LI G C   N   AM++FEEM S G 
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                TYN LI+ LC  GKLDEA+ +  +M  SG   +V+T N LI+GFCK   + +A  
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +FD++   G+S + +TYNTLID  CK  R+EDA  + + M+  G  PD  TYN L+    
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC 551

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R G+++   +I+  + +NG    +VTY  L+  LCK G+ + A  LL  + +M+     P
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGIALTP 610

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPNQTTYQIV-----------RE--- 515
           +   YN +I+G  +K K  +A  L  E+LE+    P+  +Y+IV           RE   
Sbjct: 611 H--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVD 668

Query: 516 ---EMMEKGFIPDI 526
              E++EKGF+P+ 
Sbjct: 669 FLVELLEKGFVPEF 682



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 206/400 (51%), Gaps = 36/400 (9%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D+GLK      N++L  LV     + VE  + +M    I+ ++ +FN ++  LC+A +L 
Sbjct: 147 DFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------- 237
            A  ++EDM S G+ P   T+  ++ GY ++G +                          
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 238 ------GKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                 G++  A    ++M  ++G  P++ TFNTL++G CK  ++  A+++ + M   G 
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              V TYNS+I+GLC  G++ EAV   D+M+     PN VT N LI+  CK+  VE+A  
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L   ++ +G+ P V T+N+LI   C       A  +   M  +G  PD  TYN LI  L 
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
            +G ++   N++ ++  +G    ++TYN L+   CK  K ++A  + DE   ME      
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDE---MEVHGVSR 503

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N VTYN LI G C+  ++EDA+ L+++++ +G  P++ TY
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 13/291 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS C+ S+   + +ID     + K  K     E F     +G+  + ++ N L+  L K 
Sbjct: 463 LSGCARSVITYNTLID----GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            + ED   +  +M     + +  ++N +L   C+ G + KA+DI++ M S G  P +VTY
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             LI G CK    G++  A  + + +   GI      +N +I G  +    + A+ +F E
Sbjct: 579 GTLISGLCKA---GRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 285 MGSHGIAA-GVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           M     AA   V+Y  +  GLC   G + EAV    E++  G  P   +   L  G    
Sbjct: 636 MLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695

Query: 343 KLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
            + E    L + + ++   S   +   +++    K  + +DA A    +LD
Sbjct: 696 SMEETLVKLVNMVMQKARFSEEEV---SMVKGLLKIRKFQDALATLGGVLD 743



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK---------- 446
           P+ + Y  ++  L R G+ + +R I+ ++ N+G   G   + IL+ +  +          
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 447 ------DGKSKKAVSLLDEMFKM--------------EKEKKW---PNIVTYNVLIKGFC 483
                 D   K      + M  +               K   W   P++ T+NVLIK  C
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +  +L  A  +L ++   GL+P++ T+  + +  +E+G   D++G +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG---DLDGAL 244


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 232/410 (56%), Gaps = 26/410 (6%)

Query: 136 FEAFKRAGD----YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           +E  KR  D     GL  +  + N +L    ++    + E V+ EM +R +  +L SF+ 
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++    + G+L +A    E MK +G+ P  V Y ILI+GYC+   +    K      +MV
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR---NEMV 426

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           E G + + VT+NTL++G C+ + +  A ++F+EM   G+     T  +LI+G C DG + 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A++L + M    LKP+VVT N L++GFCK   +EKA+ L+ D+  + + PS I+++ LI
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + +C  G + +AF + + M ++G+ P + T N +I G  R GN+    + +N +++ G+ 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              +TYN L+ +  K+    +A  L++    ME+    PN+VTYN ++ GF + G++++A
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLIN---NMEERGLLPNLVTYNAILGGFSRHGRMQEA 663

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
             +L+++++KG+ P+++TY                  V +EM+++GF+PD
Sbjct: 664 EMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 265/525 (50%), Gaps = 39/525 (7%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           T+I QL     +  L+L     +      + S++ T  L+H LV +KK P+ +S L   +
Sbjct: 69  TLIPQLLQKCQNYPLLLPNLIQTIASTSPNPSIIAT--LIHFLVQSKKLPEAQSLLLRII 126

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNS--IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           +    + V  I   +ST S +L  N   ++ D+L+  YV+  K   G EAF+     G  
Sbjct: 127 RKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFC 186

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            S+ +CN LL A+VK G  +    VY++  +    +N+ + N ++N LCK GKL+     
Sbjct: 187 VSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVY 246

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY--------------------------- 241
           + +M+  GV   +VTYN L++ YC++G + + +                           
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306

Query: 242 -----KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                +A  V  +M+  G+ PN  TFN ++   C+ E++  A +VF EM   G+   +++
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           ++S++     +G+L  A+A  ++M   GL P+ V    LING+C+   V  A  + +++ 
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G    V+TYNTL++  C+   ++DA  +   M++RGV PD  T   LI G  ++GN+ 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++   +    ++  +VTYN L+   CK G+ +KA  L  +M   E    +P+ ++++
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE---IFPSYISFS 543

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +LI GFC  G + +A  L +E+ EKG+ P   T   + +  +  G
Sbjct: 544 ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 215/406 (52%), Gaps = 22/406 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK  + + N L+  L KEG +E  + V  EM    +  N  +FN +L   C+   + +A
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M   GV P +++++ ++  + + G +G+   A A F+ M   G++P+ V +  L
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGR---ALAYFEKMKGVGLVPDTVIYTIL 405

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+C+++++S A+K+  EM   G    VVTYN+L+NGLC    LD+A  L  EM+  G+
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T   LI+G+CK   + KA  LF+ ++ + L P V+TYNTL+D +CK G ME A  
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+ R + P   +++ LI G    G V     + +E+   G++  LVT N ++    
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G   KA   L+ M     E   P+ +TYN LI  F ++   + A  L+N + E+GL+P
Sbjct: 586 RAGNLSKANDFLNTMIS---EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP 642

Query: 506 NQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
           N  TY                ++V  +M++KG  PD   +   I+G
Sbjct: 643 NLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 268/544 (49%), Gaps = 64/544 (11%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           T++++ F S +     L  F   TK L    SL+    LLH L V  +  +   F H   
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITK-LGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC 173

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML---AYVKNMKPH-----LGFEAFKRA 142
           K            A +T  + LCR   +++ + L        ++P+        +   + 
Sbjct: 174 KPNVI--------AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 143 GDY--------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           GD                +K +V+  + ++  L K+G+  D + ++ EM+ + I  NL +
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG C +G+ ++A  ++ +M    +SP VVT+++LI+   K+   GK ++A+ ++ 
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKE---GKFFEAEELYN 342

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M+  GI+PN +T+N++IDGF K   + AA ++F  M + G +  V+T++ LI+G C   
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D+ + L  EM   GL  N +T   LI+GFC+   +  A  L  ++   G+ P+V+T N
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462

Query: 369 TLIDAYCKEGRMEDAF----AMRNSMLD-------RGVLPDVSTYNCLIAGLSREGNVEG 417
           TL+D  C  G+++DA      M+ S +D         V PDV TYN LI GL  EG    
Sbjct: 463 TLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSE 522

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E+ + G+    +TYN ++  LCK  +  +A  + D    M  +   P++VT+  
Sbjct: 523 AEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD---SMGSKGFSPDVVTFTT 579

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           LI G+C+ G++ D   +  E+  +G++ N  TY+                 + +EM+  G
Sbjct: 580 LINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSG 639

Query: 522 FIPD 525
             PD
Sbjct: 640 VYPD 643



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 218/408 (53%), Gaps = 36/408 (8%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V++   L+  L +EG+  +   +   M    ++ N  ++  +++G+CK G    A +
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 208 IMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++  M+ +  + P VV Y+ +IDG  K G   +   A  +F +M E GI PN  T+N +I
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDG---RQTDAQNLFSEMQEKGISPNLFTYNCMI 290

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +GFC     S A ++  EM    ++  VVT++ LIN L  +GK  EA  L +EM+  G+ 
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T N++I+GF K+  ++ A  +F  ++ +G SP VIT++ LID YC   R++D   +
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  RG++ +  TY  LI G  + GN+    +++ E++++G+   +VT N L+  LC 
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK+ ++ K             P++ TYN+LI G   +GK  +A  L
Sbjct: 471 NGKLKDAL----EMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526

Query: 495 LNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
             E+  +GL+P+  TY  V                 + M  KGF PD+
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 216/437 (49%), Gaps = 42/437 (9%)

Query: 128 KNMKPHLGFEAFKRAGD------YGLKSSVLSC----NQLLRALVKEGKFEDVEYVYKEM 177
           + +K   GF   K   D      Y ++S  L C     +LL  +V+  + + V  ++++M
Sbjct: 43  ERLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKM 102

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           + RRI  N+ SF  ++   C   KL  A      +  LG  P +VT++ L+ G C +  +
Sbjct: 103 EMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       G++ +A A+   MVE+G+ PN++T+ T++DG 
Sbjct: 163 SEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 270 CKDENISAAMKVFEEMGS-HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           CK  +  +A+ +  +M     I   VV Y+++I+GL  DG+  +A  L  EM   G+ PN
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           + T N +INGFC      +A+ L  ++ E+ +SP V+T++ LI+A  KEG+  +A  + N
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML RG++P+  TYN +I G S++  ++    +   +   G    ++T++IL+   C   
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +    + LL E   M +     N +TY  LI GFCQ G L  A  LL E++  G+ PN  
Sbjct: 403 RVDDGMKLLHE---MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVV 459

Query: 509 TYQIVREEMMEKGFIPD 525
           T   + + +   G + D
Sbjct: 460 TCNTLLDGLCNNGKLKD 476



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 199/366 (54%), Gaps = 21/366 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+R     +   V++ + L+ ALVKEGKF + E +Y EM  R I  N  ++N +++G 
Sbjct: 308 EMFERK----MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            K  +L+ A  +   M + G SP V+T++ILIDGYC   G  ++     +  +M   G++
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYC---GAKRVDDGMKLLHEMSRRGLV 420

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            N +T+ TLI GFC+  N++AA+ + +EM S G+   VVT N+L++GLC +GKL +A+ +
Sbjct: 421 ANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEM 480

Query: 317 RDEMMASGL-----------KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              M  S +           +P+V T N LI G   +    +A  L++++  +GL P  I
Sbjct: 481 FKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN++ID  CK+ R+++A  M +SM  +G  PDV T+  LI G  + G V     +  E+
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM 600

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
              G+ A  +TY  L+   C+ G    A+ +  EM        +P+ +T   ++ G   K
Sbjct: 601 GRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGLWSK 657

Query: 486 GKLEDA 491
            +L+ A
Sbjct: 658 EELKRA 663



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 191/408 (46%), Gaps = 31/408 (7%)

Query: 21  WSKLKNTDPNTVILQLFNSDADPVL-----ILRYFCWSTKELRASHSLLLTGRLLHSLVV 75
           W   + TD   +  ++      P L     ++  FC S +   A        RLL  +  
Sbjct: 259 WKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ-------RLLREMFE 311

Query: 76  AKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
            K  P + +F   ++  VK GKF     +++ +      +  N+I  + ++  + K  + 
Sbjct: 312 RKMSPDVVTFSVLINALVKEGKFFEAEELYNEM--LPRGIIPNTITYNSMIDGFSKQNRL 369

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                 F      G    V++ + L+       + +D   +  EM RR +  N  ++  +
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++G C+ G LN A D++++M S GV P VVT N L+DG C     GK+  A  +FK M +
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN---GKLKDALEMFKVMQK 486

Query: 253 -----------NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
                      N + P+  T+N LI G   +   S A +++EEM   G+    +TYNS+I
Sbjct: 487 SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC   +LDEA  + D M + G  P+VVT   LING+CK   V     +F ++  +G+ 
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            + ITY TLI  +C+ G +  A  +   M+  GV PD  T   ++ GL
Sbjct: 607 ANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 25/271 (9%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F  M        V+ +  L+  +    + D  ++L  +M    
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +  N+ +   LI  FC    +  A   F  I++ G  PS++T++TL+   C E R+ +A 
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + +      P+V  +  L+ GL REG V     +++ +V +G++   +TY  +V  +
Sbjct: 167 HFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M ++ + K  PN+V Y+ +I G  + G+  DA  L +E       
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIK--PNVVIYSAIIDGLWKDGRQTDAQNLFSE------- 273

Query: 505 PNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
                       M EKG  P++  +   I+G
Sbjct: 274 ------------MQEKGISPNLFTYNCMING 292


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 265/524 (50%), Gaps = 49/524 (9%)

Query: 41  ADPVLILRYFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSV 98
           + P  +L +F W      +S  HS      LL  L+  +K+   +S L  F+ +      
Sbjct: 65  SQPETLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDH---P 121

Query: 99  STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
               HA    SD      ++ D  + AYV + +PHLG + F +      + ++L+CN LL
Sbjct: 122 HHSLHAHLLRSDHTIPKPLL-DTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLL 180

Query: 159 RALVKEGKFEDVEY---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
            ALV+      + +   V+++  +  ++ N+++FN +++G C      +A  ++  M   
Sbjct: 181 NALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEY 240

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G  P  VTYN ++   CK+    ++ +   +   M  +G+ PN  T+N L+ G+CK + +
Sbjct: 241 GCCPDNVTYNTVLTALCKR---SQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWL 297

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A +V E M   G+   V TYN+++ GLC +GK+DEAV LRD+M +  L P+VVT N L
Sbjct: 298 KEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTL 357

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G  + +  + A  L +++  +G+  + +T+N +I  +C EG++++A  +   M++ G 
Sbjct: 358 IDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGF 417

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG------- 448
            PD  TYN +I G  + G +     +M+E+   G++    T N L+  +C +        
Sbjct: 418 SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYT 477

Query: 449 ---KSKKAVSLLDEM---------FKMEKE----KKW---------PNIVTYNVLIKGFC 483
              K++K   +LDE+         FK E+     K W           I+TYN +I+G C
Sbjct: 478 LTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLC 537

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
             GK + A   LNELLEKGL+P+++T  I+      E  +EK F
Sbjct: 538 LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAF 581



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 216/382 (56%), Gaps = 6/382 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V + N ++R L  EGK ++   +  +M+  ++  ++ ++N +++G  +    + A
Sbjct: 311 GMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAA 370

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E+MK+ GV    VT+NI+I  +C +G I +   A  V   MVE+G  P+  T+NT+
Sbjct: 371 FKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDE---ASNVMVKMVESGFSPDCFTYNTM 427

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+CK   ++ A K+ +EMG  G+     T N+L++ +C++ +LD+A  L  +    G 
Sbjct: 428 INGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGY 487

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + VT   LI G+ K +  ++A  L++++ E G+  ++ITYNT+I   C  G+ + A  
Sbjct: 488 ILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVD 547

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             N +L++G++PD ST N +I G   EG VE      N++V + ++  + T NIL+  LC
Sbjct: 548 KLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLC 607

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++G  +K ++L +      K     + VTYN++I  FC++ +LEDA  L+ E+  K L P
Sbjct: 608 REGMLEKGLTLFNTWISKGKPM---DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEP 664

Query: 506 NQTTYQIVREEMMEKGFIPDIE 527
           ++ TY  +   + + G   + E
Sbjct: 665 DRYTYNAIVTGLTKAGRTEEAE 686



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 207/414 (50%), Gaps = 46/414 (11%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E+FK   D      V++ N L+    +    +    + +EMK R ++ N  + N ++   
Sbjct: 343 ESFKLVPD------VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWF 396

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA------------- 243
           C  GK+++AS++M  M   G SP   TYN +I+GYCK G + + YK              
Sbjct: 397 CTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDT 456

Query: 244 -----------------DAVFKDM--VENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                            DA    M   + G + +EVT+ TLI G+ KDE    A+K++EE
Sbjct: 457 FTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEE 516

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   GI A ++TYN++I GLC+ GK D+AV   +E++  GL P+  TSN +I+G+C +  
Sbjct: 517 MKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGA 576

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           VEKA    + + E  L P + T N L+   C+EG +E    + N+ + +G   D  TYN 
Sbjct: 577 VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNI 636

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS----KKAVSLLDEM 460
           +I+   +E  +E   ++M E+    +     TYN +V  L K G++    K A+   ++ 
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG 696

Query: 461 FKMEKEKKWPNIVT----YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +++ +   P + T    Y+  I   C +GK +DA  L  +  +KG+  N+ TY
Sbjct: 697 QQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 22/265 (8%)

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD---EMMASGLKPNVVTSNALI 336
           ++F +M        ++T N+L+N L         V  R+   + +  G++PNV T N LI
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+C     E+A  L + + E G  P  +TYNT++ A CK  ++     +   M + G+ 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+ G  +   ++    ++  +   GM   + TYN +V  LC +GK  +AV L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
            D   KME  K  P++VTYN LI G  +    + A  L+ E+  +G+  N  T+ I    
Sbjct: 339 RD---KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW 395

Query: 513 ------------VREEMMEKGFIPD 525
                       V  +M+E GF PD
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPD 420



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 49/268 (18%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L++ Y K+ +     + ++   + G+ +++++ N ++R L   GK +       E+  + 
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +  + N +++G C  G + KA      M    + P + T NIL+ G C++G    + 
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREG---MLE 613

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           K   +F   +  G   + VT+N +I  FCK+  +  A  +  EM    +     TYN+++
Sbjct: 614 KGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIV 673

Query: 302 NGL----------------------------------------------CVDGKLDEAVA 315
            GL                                              C  GK  +A+ 
Sbjct: 674 TGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMK 733

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKK 343
           L  +    G+  N  T   L++G  K++
Sbjct: 734 LFQQAEQKGVSLNKYTYIKLMDGLLKRR 761


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 15/411 (3%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++++L   +N +     + F++  +  +     S   L+  L K GK  D   +++++  
Sbjct: 292 NIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             +  +  ++  +++GLC A   + A ++  DM   G  P  VTYN++ID  CK+G    
Sbjct: 352 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG---M 408

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + +A  + K M+E+G +P+ VT+NT++DG CK   +  A+ +F EM   G      ++N+
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468

Query: 300 LINGLCVD---------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           +I GLC           GKLDEA  L   M   G  P+VVT + LI+G C    V+ AR 
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L +D+ ++   P+V+T NTLI   CK GR+++A  + ++M+  G  PDV TYN L+ G  
Sbjct: 529 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R G  E  R +++++V  G+   +VTY  LV  LCK  +  +A  +  +M   +     P
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM---KSSGCAP 645

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           N+ TY  LI GFC  G+++    L  E++  G+ P+   Y  +  E+ + G
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 696



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 198/352 (56%), Gaps = 15/352 (4%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L  +N V+ GLC+  ++++A  + E M    VSP   +Y ILIDG  K G   K+  A  
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG---KLNDARN 344

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F+ ++ +G+ P+ V + +LI G C   +   A ++F +M   G     VTYN +I+  C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G L+EA  L  +M+  G  P+VVT N +++G CK   VE+A +LF+++   G +P+  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 366 TYNTLI---------DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++NT+I         D  C+ G++++AF +   M D G +PDV TY+ LI+GL     V+
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             R+++ ++V    +  +VT N L+  LCK G+ K+A  +LD M       + P++VTYN
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS---SGQSPDVVTYN 581

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            L+ G C+ G+ E A  LL++++ +GL PN  TY  +   + +   +P+  G
Sbjct: 582 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 216/426 (50%), Gaps = 15/426 (3%)

Query: 89  FVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
             K GK      +F  L        ++   S+I  + M     + +     E F      
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR-----ELFADMNRR 387

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S ++ N ++ A  K G  E+   + K+M       ++ ++N V++GLCK+ ++ +A
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------GKMYKADAVFKDMVENGILPNE 259
             +  +M+ LG +P   ++N +I G C++  I      GK+ +A  + K M ++G +P+ 
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT++TLI G C    +  A  + E+M        VVT N+LI+GLC  G++ EA  + D 
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M++SG  P+VVT N L++G C+    E+AR L  D+  +GL+P+V+TY  L+   CK  R
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           + +A  +   M   G  P++ TY  LI G    G V+G   +  E+V  G+    V Y  
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L   LCK G+S +A+ +L E  +  + + W + V Y   + G  + GK+E A G + +++
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMV 746

Query: 500 EKGLIP 505
             G +P
Sbjct: 747 RGGQLP 752



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 218/421 (51%), Gaps = 18/421 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS   +++++A  K  +     E  +   +  +  +  S + +L  L+  G+ ++   VY
Sbjct: 144 NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVY 203

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +E +R   E  L + N +L G C  G+++KA +++  M     +P  V+Y  ++DG CK 
Sbjct: 204 RENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKA 260

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVT------FNTLIDGFCKDENISAAMKVFEEMGSH 288
           G   ++ +A  +F D        +  +      +N +I G C+++ I  A+++FE+M   
Sbjct: 261 G---RVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNER 317

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
            ++    +Y  LI+GL   GKL++A  L  +++ SG+ P+ V   +LI+G C     + A
Sbjct: 318 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 377

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R LF D++ +G  PS +TYN +IDA CK G +E+A  +   M++ G +PDV TYN ++ G
Sbjct: 378 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 437

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL--LDEMF----K 462
           L +   VE    + NE+   G      ++N ++  LC+  K  +A     LDE F    +
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTY+ LI G C   +++DA  LL +++++   P   T   +   + + G 
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 523 I 523
           I
Sbjct: 558 I 558



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 195/444 (43%), Gaps = 56/444 (12%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLA 125
           +LLHS V         S +H       F     +F  ++   C  S    +++ID    A
Sbjct: 348 KLLHSGVTPSTV-AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID----A 402

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K        +  K+  + G    V++ N ++  L K  + E+   ++ EM+R     N
Sbjct: 403 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 462

Query: 186 LDSFNFVLNGLCKA---------GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
             S N ++ GLC+          GKL++A  +++ M   G  P VVTY+ LI G C    
Sbjct: 463 RRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS--- 519

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I ++  A  + +DMV+    P  VT NTLI G CK   I  A +V + M S G +  VVT
Sbjct: 520 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 579

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L++G C  G+ + A  L  +M+A GL PNVVT  AL++G CK   + +A  +F  + 
Sbjct: 580 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 639

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA--------- 407
             G +P++ TY  LI  +C  G+++    +   M+  G+ PD   Y  L A         
Sbjct: 640 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 699

Query: 408 ----------------------------GLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
                                       GL   G +E     + ++V  G          
Sbjct: 700 RALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS 759

Query: 440 LVGALCKDGKSKKAVSLLDEMFKM 463
           LV  LCK G+  +A ++L+E+  +
Sbjct: 760 LVAGLCKSGQGGEARAVLEEIMDL 783



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 190/400 (47%), Gaps = 54/400 (13%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+ +L K  + E V+ + + M  R    +  +F  +L GLCKAGK+++A  +M++M+S
Sbjct: 48  NVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRS 107

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             + P   T + L    C +G + + ++       ++E   + N   +N ++   CK   
Sbjct: 108 RMIPPYFATSSFLAHELCLRGSMERAFQ-------LLEIMPVANSSAYNIVVVALCKAAR 160

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A+++   M    I     + +S++ GL   G++DEA+ +  E   +  +P +VT N 
Sbjct: 161 VDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNV 217

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME------------- 381
           L+ GFC +  V+KAR L   + ++  +P  ++Y T++D  CK GR+E             
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPS 277

Query: 382 ----------------------------DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
                                       +A  M   M +R V PD  +Y  LI GL++ G
Sbjct: 278 SSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG 337

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +   RN+  +L+++G+    V Y  L+  LC       A  L  +   M +    P+ V
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD---MNRRGCPPSPV 394

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           TYNV+I   C++G LE+A  L+ +++E G +P+  TY  V
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 434



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 48/408 (11%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G      +   +L  L K GK ++ E V  EM+ R I     + +F+ + LC  G + 
Sbjct: 72  DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------- 237
           +A  ++E M     S     YNI++   CK   +                          
Sbjct: 132 RAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVL 187

Query: 238 ------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                 G++ +A  V++   EN   P  VT N L++GFC    +  A ++   M     A
Sbjct: 188 VGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECA 244

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDE------MMASGLKPNVVTSNALINGFCKKKLV 345
              V+Y ++++GLC  G+++EAV L  +        +S   P++   N +I G C+   +
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRI 304

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++A  +F+ ++E+ +SP   +Y  LID   K G++ DA  +   +L  GV P    Y  L
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL    + +  R +  ++   G     VTYN+++ A CK G  ++A  L+    KM +
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK---KMIE 421

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +   P++VTYN ++ G C+  ++E+A  L NE+   G  PN+ ++  +
Sbjct: 422 DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 14/286 (4%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G+ P  + +  +I G+C    +G+ ++A  +F  ++E    P    +N LID   K
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCN---VGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSK 56

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            +   A  K+ + M   G      T+ +++ GLC  GK+DEA  + DEM +  + P   T
Sbjct: 57  RQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFAT 116

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
           S+ L +  C +  +E+A  L + +     S     YN ++ A CK  R++DA  +  +M 
Sbjct: 117 SSFLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMS 172

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++ +     + + ++ GL   G ++    +  E   N     LVT N+L+   C  G+  
Sbjct: 173 EKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVD 229

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           KA  LL     M  E+  P+ V+Y  ++ G C+ G++E+A  L  +
Sbjct: 230 KARELLR---AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G+ P  +   ++I G+C      +A  +F  + E+  SP    YN LID+  K   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT--- 436
            E    M   M+DRG  PD  T+  ++ GL + G ++    +M+E+ +  +     T   
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 437 ----------------------------YNILVGALCKDGKSKKAVSL------------ 456
                                       YNI+V ALCK  +   A+ L            
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 457 ----------------LDEMFKMEKE-KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
                           +DE  ++ +E ++ P +VT NVL++GFC +G+++ A  LL  + 
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMP 239

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++   P++ +Y  V + + + G + +
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEE 265


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 213/388 (54%), Gaps = 7/388 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  +YG +   ++   +L  L K G       ++++M+ R I+ ++  ++ V++ LCK G
Sbjct: 229 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 288

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
             + A  +  +M+  G+   VVTY+ LI G C     GK      + ++M+   I+P+ V
Sbjct: 289 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND---GKWDDGAKMLREMIGRNIIPDVV 345

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF+ LID F K+  +  A +++ EM + GIA   +TYNSLI+G C +  L EA  + D M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G +P++VT + LIN +CK K V+    LF +IS +GL P+ ITYNTL+  +C+ G++
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +   M+ RGV P V TY  L+ GL   G +     I  ++  + M  G+  YNI+
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +C   K   A SL      +  +   P++VTYNV+I G C+KG L +A+ L  ++ E
Sbjct: 526 IHGMCNASKVDDAWSLF---CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 501 KGLIPNQTTYQI-VREEMMEKGFIPDIE 527
            G  P+  TY I +R  +   G I  +E
Sbjct: 583 DGCTPDDFTYNILIRAHLGGSGLISSVE 610



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 220/388 (56%), Gaps = 8/388 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  + F++  +  +K+SV+  + ++ +L K+G F+D   ++ EM+ + I+ ++ +++ ++
Sbjct: 257 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 316

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLC  GK +  + ++ +M    + P VVT++ LID + K+G   K+ +A  ++ +M+  
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITR 373

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+ +T+N+LIDGFCK+  +  A ++F+ M S G    +VTY+ LIN  C   ++D+ 
Sbjct: 374 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 433

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L  E+ + GL PN +T N L+ GFC+   +  A+ LF ++  +G+ PSV+TY  L+D 
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G +  A  +   M    +   +  YN +I G+     V+   ++   L + G++  
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           +VTYN+++G LCK G   +A    D +F KM+++   P+  TYN+LI+       L  + 
Sbjct: 554 VVTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 609

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEK 520
            L+ E+   G   + +T ++V + + ++
Sbjct: 610 ELIEEMKVCGFSADSSTIKMVIDMLSDR 637



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 193/362 (53%), Gaps = 6/362 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS  + LR  + + K  D   +++ M + R       FN + + + +  + +      + 
Sbjct: 65  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 124

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+  G+   + T  I+I+ YC+K    K+  A +V     + G  P+ +TF+TL++GFC 
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKK---KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 181

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +S A+ + + M        +VT ++LINGLC+ G++ EA+ L D M+  G +P+ VT
Sbjct: 182 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 241

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              ++N  CK      A  LF  + E+ +  SV+ Y+ +ID+ CK+G  +DA ++ N M 
Sbjct: 242 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 301

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+  DV TY+ LI GL  +G  +    ++ E++   +   +VT++ L+    K+GK  
Sbjct: 302 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 361

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  L +EM         P+ +TYN LI GFC++  L +AN + + ++ KG  P+  TY 
Sbjct: 362 EAKELYNEMI---TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 418

Query: 512 IV 513
           I+
Sbjct: 419 IL 420



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 9/321 (2%)

Query: 67  GRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
            ++L  ++     P + +F   + +FVK GK      +++ + T    +  ++I  + L+
Sbjct: 329 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT--RGIAPDTITYNSLI 386

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + K    H   + F      G +  +++ + L+ +  K  + +D   +++E+  + + 
Sbjct: 387 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 446

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N  ++N ++ G C++GKLN A ++ ++M S GV P VVTY IL+DG C     G++ KA
Sbjct: 447 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN---GELNKA 503

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +F+ M ++ +      +N +I G C    +  A  +F  +   G+   VVTYN +I G
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G L EA  L  +M   G  P+  T N LI        +  +  L +++   G S  
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623

Query: 364 VITYNTLIDAYCKEGRMEDAF 384
             T   +ID    + R++ +F
Sbjct: 624 SSTIKMVIDML-SDRRLDKSF 643



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 50/286 (17%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I    ++Y   +    VD K+++A+ L + M+ S   P  +  N L +   + K  +   
Sbjct: 60  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 119

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
                +   G+   + T   +I+ YC++ ++  AF++       G  PD  T++ L+ G 
Sbjct: 120 GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 179

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------- 461
             EG V     +++ +V    R  LVT + L+  LC  G+  +A+ L+D M         
Sbjct: 180 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 239

Query: 462 ------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                                   KME+     ++V Y+++I   C+ G  +DA  L NE
Sbjct: 240 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 299

Query: 498 LLEKGLIPNQTTY-----------------QIVREEMMEKGFIPDI 526
           +  KG+  +  TY                 +++R EM+ +  IPD+
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR-EMIGRNIIPDV 344


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 218/412 (52%), Gaps = 6/412 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N   + +L+  +    +  L F    +    GL+ ++++   L+  L K GKF    
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ +M  R    ++ ++  ++NGLCK G+   A+ +++ M+  G  P VVTY+ +ID +
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            K     ++ +A  +F  M   GI P+  T+N+LI G C       A  +  EM S  I 
Sbjct: 249 RKD---RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VT+N L++ +C +GK+ EA  +   M   G++P+VVT ++L+ G+  +  V +AR L
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD +  +G  P V +YN LI+ YCK  R+++A  + N M+ +G+ P+  +YN LI GL +
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G++   RN+   +  NG    L TY+IL+   CK G   KA  L      M+     PN
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFR---AMQSTYSKPN 482

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +V YN+LI   C+ G L DA  L +EL  KGL PN   Y  +   + ++G +
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 208/371 (56%), Gaps = 6/371 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K+  + G + +V++ + ++ +  K+ +  +   ++  MK + I  ++ ++N ++ GLC 
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             +  +AS ++ +M+SL + P +VT+N+L+D  CK+G   K+ +A  V K M E G+ P+
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEG---KVSEAQGVLKTMTEMGVEPD 342

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+++L+ G+     +  A K+F+ M + G    V +YN LING C   ++DEA  L +
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  GL PN V+ N LI+G C+   + +AR LF ++   G  P++ TY+ L+D +CK+G
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               AF +  +M      P++  YN LI  + + GN+   R + +EL   G++     Y 
Sbjct: 463 YFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYT 522

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++  LCK+G   +A   L+    ME++   P+ ++YNV+I+GF        A  L+ E+
Sbjct: 523 TIINGLCKEGLLDEA---LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579

Query: 499 LEKGLIPNQTT 509
            +KG I +  T
Sbjct: 580 RDKGFIADVGT 590



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 203/373 (54%), Gaps = 7/373 (1%)

Query: 151 VLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++   +LL A+VK G++ D V  + K+M+   +  N+ + + ++N      +++ A  ++
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P +VT+  LI+  CK   +GK  +A  +F DMV  G  P+  T+ T+I+G 
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCK---VGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK    +AA  + ++M   G    VVTY+++I+    D +++EA+ +   M   G+ P++
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N+LI G C     ++A  L +++    + P ++T+N L+D  CKEG++ +A  +  +
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M + GV PDV TY+ L+ G S    V   R + + ++  G +  + +YNIL+   CK  +
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  L +EM     +   PN V+YN LI G CQ G L +A  L   +   G +PN  T
Sbjct: 394 IDEAKQLFNEMI---HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450

Query: 510 YQIVREEMMEKGF 522
           Y I+ +   ++G+
Sbjct: 451 YSILLDGFCKQGY 463



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 192/355 (54%), Gaps = 7/355 (1%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL-NKASDIMEDMKSLGVSPKVVTYNI 226
           +D    +  M  R+    +  F  +L+ + K G+  +    + + M+  G+SP + T +I
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI+ +     + ++  A +V   +++ G+ P  VTF TLI+  CK    + AM++F++M 
Sbjct: 139 LINCF---SHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G    V TY ++INGLC  G+   A  L  +M  +G +PNVVT + +I+   K + V 
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F  +  +G+SP + TYN+LI   C   + ++A A+ N M    ++PD+ T+N L+
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             + +EG V   + ++  +   G+   +VTY+ L+       +  +A  L D M  + K 
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM--ITKG 373

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            K P++ +YN+LI G+C+  ++++A  L NE++ +GL PN  +Y  +   + + G
Sbjct: 374 CK-PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLG 427



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 3/213 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  Y K  +     + F      GL  + +S N L+  L + G   +   ++K M  
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                NL +++ +L+G CK G   KA  +   M+S    P +V YNILID  CK G    
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN--- 498

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +  A  +F ++   G+ PN   + T+I+G CK+  +  A++ F  M   G     ++YN 
Sbjct: 499 LRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +I G         AV L  EM   G   +V T+
Sbjct: 559 IIRGFLHHKDESRAVQLIGEMRDKGFIADVGTT 591


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 213/388 (54%), Gaps = 7/388 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  +YG +   ++   +L  L K G       ++++M+ R I+ ++  ++ V++ LCK G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
             + A  +  +M+  G+   VVTY+ LI G C     GK      + ++M+   I+P+ V
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND---GKWDDGAKMLREMIGRNIIPDVV 316

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF+ LID F K+  +  A +++ EM + GIA   +TYNSLI+G C +  L EA  + D M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G +P++VT + LIN +CK K V+    LF +IS +GL P+ ITYNTL+  +C+ G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +   M+ RGV P V TY  L+ GL   G +     I  ++  + M  G+  YNI+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +C   K   A SL      +  +   P++VTYNV+I G C+KG L +A+ L  ++ E
Sbjct: 497 IHGMCNASKVDDAWSLF---CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 501 KGLIPNQTTYQI-VREEMMEKGFIPDIE 527
            G  P+  TY I +R  +   G I  +E
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVE 581



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 218/431 (50%), Gaps = 41/431 (9%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +  K    F    RA   G +   ++ + L+     EG+  +   +   M   +   +
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L + + ++NGLC  G++++A  +++ M   G  P  VTY  +++  CK G       A  
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL---ALD 231

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F+ M E  I  + V ++ +ID  CKD +   A+ +F EM   GI A VVTY+SLI GLC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291

Query: 306 VDGKLD-----------------------------------EAVALRDEMMASGLKPNVV 330
            DGK D                                   EA  L +EM+  G+ P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+LI+GFCK+  + +A  +FD +  +G  P ++TY+ LI++YCK  R++D   +   +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             +G++P+  TYN L+ G  + G +   + +  E+V+ G+   +VTY IL+  LC +G+ 
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            KA+ + +   KM+K +    I  YN++I G C   K++DA  L   L +KG+ P+  TY
Sbjct: 472 NKALEIFE---KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528

Query: 511 QIVREEMMEKG 521
            ++   + +KG
Sbjct: 529 NVMIGGLCKKG 539



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 220/388 (56%), Gaps = 8/388 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  + F++  +  +K+SV+  + ++ +L K+G F+D   ++ EM+ + I+ ++ +++ ++
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLC  GK +  + ++ +M    + P VVT++ LID + K+G   K+ +A  ++ +M+  
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITR 344

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+ +T+N+LIDGFCK+  +  A ++F+ M S G    +VTY+ LIN  C   ++D+ 
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L  E+ + GL PN +T N L+ GFC+   +  A+ LF ++  +G+ PSV+TY  L+D 
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G +  A  +   M    +   +  YN +I G+     V+   ++   L + G++  
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           +VTYN+++G LCK G   +A    D +F KM+++   P+  TYN+LI+       L  + 
Sbjct: 525 VVTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEK 520
            L+ E+   G   + +T ++V + + ++
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVIDMLSDR 608



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 193/362 (53%), Gaps = 6/362 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS  + LR  + + K  D   +++ M + R       FN + + + +  + +      + 
Sbjct: 36  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+  G+   + T  I+I+ YC+K    K+  A +V     + G  P+ +TF+TL++GFC 
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKK---KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +S A+ + + M        +VT ++LINGLC+ G++ EA+ L D M+  G +P+ VT
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              ++N  CK      A  LF  + E+ +  SV+ Y+ +ID+ CK+G  +DA ++ N M 
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+  DV TY+ LI GL  +G  +    ++ E++   +   +VT++ L+    K+GK  
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  L +EM         P+ +TYN LI GFC++  L +AN + + ++ KG  P+  TY 
Sbjct: 333 EAKELYNEMI---TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389

Query: 512 IV 513
           I+
Sbjct: 390 IL 391



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 9/321 (2%)

Query: 67  GRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
            ++L  ++     P + +F   + +FVK GK      +++ + T    +  ++I  + L+
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT--RGIAPDTITYNSLI 357

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + K    H   + F      G +  +++ + L+ +  K  + +D   +++E+  + + 
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N  ++N ++ G C++GKLN A ++ ++M S GV P VVTY IL+DG C     G++ KA
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN---GELNKA 474

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +F+ M ++ +      +N +I G C    +  A  +F  +   G+   VVTYN +I G
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G L EA  L  +M   G  P+  T N LI        +  +  L +++   G S  
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594

Query: 364 VITYNTLIDAYCKEGRMEDAF 384
             T   +ID    + R++ +F
Sbjct: 595 SSTIKMVIDML-SDRRLDKSF 614



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 50/286 (17%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I    ++Y   +    VD K+++A+ L + M+ S   P  +  N L +   + K  +   
Sbjct: 31  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
                +   G+   + T   +I+ YC++ ++  AF++       G  PD  T++ L+ G 
Sbjct: 91  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------- 461
             EG V     +++ +V    R  LVT + L+  LC  G+  +A+ L+D M         
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210

Query: 462 ------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                                   KME+     ++V Y+++I   C+ G  +DA  L NE
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270

Query: 498 LLEKGLIPNQTTY-----------------QIVREEMMEKGFIPDI 526
           +  KG+  +  TY                 +++R EM+ +  IPD+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR-EMIGRNIIPDV 315


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 222/434 (51%), Gaps = 54/434 (12%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKL 202
           ++G   S +S N ++    KEG+ ED     +EM  +     +  +FN ++NGLCKAG +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------- 237
             A +IM+ M   G  P V TYN +I G CK G +                         
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371

Query: 238 -------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                   ++ +A  + + +   GILP+  TFN+LI G C   N   AM++FEEM S G 
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                TYN LI+ LC  GKLDEA+ +  +M  SG   +V+T N LI+GFCK     +A  
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +FD++   G+S + +TYNTLID  CK  R+EDA  + + M+  G  PD  TYN L+    
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R G+++   +I+  + +NG    +VTY  L+  LCK G+ + A  LL  + +M+     P
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTP 610

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPNQTTYQIV-----------RE--- 515
           +   YN +I+G  +K K  +A  L  E+LE+    P+  +Y+IV           RE   
Sbjct: 611 H--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668

Query: 516 ---EMMEKGFIPDI 526
              E++EKGF+P+ 
Sbjct: 669 FLVELLEKGFVPEF 682



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 201/368 (54%), Gaps = 7/368 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++GLK      N++L  LV     + VE  + +M    I+ ++ +FN ++  LC+A +L 
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  ++EDM S G+ P   T+  ++ GY ++G +    +   + + MVE G   + V+ N
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR---IREQMVEFGCSWSNVSVN 263

Query: 264 TLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            ++ GFCK+  +  A+   +EM +  G      T+N+L+NGLC  G +  A+ + D M+ 
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P+V T N++I+G CK   V++A  + D +  +  SP+ +TYNTLI   CKE ++E+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   +  +G+LPDV T+N LI GL    N      +  E+ + G      TYN+L+ 
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +LC  GK  +A+++L +   ME      +++TYN LI GFC+  K  +A  + +E+   G
Sbjct: 444 SLCSKGKLDEALNMLKQ---MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 503 LIPNQTTY 510
           +  N  TY
Sbjct: 501 VSRNSVTY 508



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 201/367 (54%), Gaps = 7/367 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+K  V + N L++AL +  +      + ++M    +  +  +F  V+ G  + G L+ 
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEVTFN 263
           A  I E M   G S   V+ N+++ G+CK+G   ++  A    ++M  ++G  P++ TFN
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEG---RVEDALNFIQEMSNQDGFFPDQYTFN 299

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL++G CK  ++  A+++ + M   G    V TYNS+I+GLC  G++ EAV + D+M+  
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
              PN VT N LI+  CK+  VE+A  L   ++ +G+ P V T+N+LI   C       A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  +G  PD  TYN LI  L  +G ++   N++ ++  +G    ++TYN L+  
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK  K+++A  + DE   ME      N VTYN LI G C+  ++EDA  L+++++ +G 
Sbjct: 480 FCKANKTREAEEIFDE---MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536

Query: 504 IPNQTTY 510
            P++ TY
Sbjct: 537 KPDKYTY 543



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 22/351 (6%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +L  L ++G  +    I+EDMKS        T+ ILI+ Y +     ++        D  
Sbjct: 89  ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID-- 146

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           E G+ P+   +N +++      ++        +M   GI   V T+N LI  LC   +L 
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+ + ++M + GL P+  T   ++ G+ ++  ++ A  + + + E G S S ++ N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 372 DAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
             +CKEGR+EDA      M ++ G  PD  T+N L+ GL + G+V+    IM+ ++  G 
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              + TYN ++  LCK G+ K+AV +LD+M   +     PN VTYN LI   C++ ++E+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS---PNTVTYNTLISTLCKENQVEE 383

Query: 491 ANGLLNELLEKGLIPNQTTYQ-------IVR---------EEMMEKGFIPD 525
           A  L   L  KG++P+  T+        + R         EEM  KG  PD
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 10/388 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+    K  +     E  +     G+   V + N L++ L           ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM+ +  E +  ++N +++ LC  GKL++A ++++ M+  G +  V+TYN LIDG+CK 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               K  +A+ +F +M  +G+  N VT+NTLIDG CK   +  A ++ ++M   G     
Sbjct: 484 ---NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C  G + +A  +   M ++G +P++VT   LI+G CK   VE A  L   
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREG 413
           I  +G++ +   YN +I    ++ +  +A  +   ML++    PD  +Y  +  GL   G
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660

Query: 414 N-VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +    + + EL+  G      +  +L   L      +  V L++ +  M+K +     
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV--MQKARFSEEE 718

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLE 500
           V+   ++KG  +  K +DA   L  +L+
Sbjct: 719 VS---MVKGLLKIRKFQDALATLGGVLD 743



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 13/291 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS C+ S+   + +ID     + K  K     E F     +G+  + ++ N L+  L K 
Sbjct: 463 LSGCARSVITYNTLID----GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            + ED   +  +M     + +  ++N +L   C+ G + KA+DI++ M S G  P +VTY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             LI G CK    G++  A  + + +   GI      +N +I G  +    + A+ +F E
Sbjct: 579 GTLISGLCKA---GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 285 MGSHGIA-AGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           M     A    V+Y  +  GLC   G + EAV    E++  G  P   +   L  G    
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695

Query: 343 KLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
            + E    L + + ++   S   +   +++    K  + +DA A    +LD
Sbjct: 696 SMEETLVKLVNMVMQKARFSEEEV---SMVKGLLKIRKFQDALATLGGVLD 743


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 234/427 (54%), Gaps = 36/427 (8%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ L+  Y+K   P    + F  A   G+ ++V + N LL  L KEGK  +   ++++M 
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMV 460

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
           R+ +  ++ S+N ++ G C+ G ++ A+ +  +M   G+ P ++TY++L+DGY KKG   
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+  ++    K +V+ G +P  +T+N +I
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGF K+ ++++A+ V+ EM   G++  V TY +LING C    +D A+ + DEM   G++
Sbjct: 581 DGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIE 640

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +V    ALI+GFC+K  +  A  L  ++ E GLSP+ + Y+++I  + K   ME A  +
Sbjct: 641 LDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHL 700

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M++ G+  D+  Y  LI+GL +EG +     +  E++  G+   L+TY++L+  LC 
Sbjct: 701 HKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCN 760

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+ + A  +L++   M+++   P +  YN LI G  ++G L++A  L NE+L+KGL+P+
Sbjct: 761 KGQLENAQKILED---MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPD 817

Query: 507 QTTYQIV 513
            TTY I+
Sbjct: 818 DTTYDIL 824



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 263/526 (50%), Gaps = 45/526 (8%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKY-PKIRSFLHMFVKNG- 93
           L N   DP   L YF W++++     S+     LLH L  + +   K R+ L+ F  +  
Sbjct: 71  LLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDW 130

Query: 94  ------------------KFTSVSTIFHAL-------------STCSDSLCRNSII---- 118
                              F S S +F+ L               C +SL    I+    
Sbjct: 131 GPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLT 190

Query: 119 -IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
            +++ +   VKN       + + +    G+K    + + ++RA ++EGK E+ E  ++E 
Sbjct: 191 VMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREA 250

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           K + +EL+  +++ V+  +CK      A  ++ +M+  G  P  V +  +I G C K   
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQ-- 307

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GKM +A  V  +M+  G   N V   TL+ G+CK  ++ +A+++F++M  +GI    VTY
Sbjct: 308 GKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTY 367

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
             +I   C +G +D+A  + ++M    + P V   N+LI G+ K +  E+A  LFD+   
Sbjct: 368 AVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVA 427

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G++ +V TYN+L+   CKEG+M +A ++   M+ +GV P V +YN +I G  ++G+++ 
Sbjct: 428 CGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDS 486

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E++  G++  L+TY++L+    K G ++ A  L D   +M  E   P+  T N+
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYD---RMRGENIAPSDFTCNI 543

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +I G C+ G+  ++   L +L+++G IP   TY  + +  +++G +
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 198/384 (51%), Gaps = 10/384 (2%)

Query: 130 MKPHLGFEAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           MK     EA K  G+    G   +V+    L++   K+G  +    ++ +M    I  N 
Sbjct: 305 MKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN 364

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++  ++   CK G ++KA +I   MK+  +SP V   N LI GY K        +A  +
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARS---PEEASKL 421

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F + V  GI  N  T+N+L+   CK+  +S A  ++E+M   G+   VV+YN++I G C 
Sbjct: 422 FDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQ 480

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G +D A  +  EM+  GLKPN++T + L++G+ KK   E A  L+D +  + ++PS  T
Sbjct: 481 QGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFT 540

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            N +I+  CK GR  ++      ++  G +P   TYNC+I G  +EG+V     +  E+ 
Sbjct: 541 CNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC 600

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   + TY  L+   CK      A+ ++DEM     E    ++  Y  LI GFC+KG
Sbjct: 601 KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIEL---DVTVYCALIDGFCRKG 657

Query: 487 KLEDANGLLNELLEKGLIPNQTTY 510
            + +A+ LL+EL E GL PN+  Y
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVY 681



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 169/279 (60%), Gaps = 3/279 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  K+    G   + ++ N ++   VKEG       VY EM +  +  N+ ++  ++NG 
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK+  ++ A  +M++MK+ G+   V  Y  LIDG+C+KG    M  A  +  ++ E G+ 
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKG---DMVNASQLLSELQEVGLS 675

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN+V ++++I GF K +N+ AA+ + + M + GI   +  Y +LI+GL  +GKL  A  L
Sbjct: 676 PNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASEL 735

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+A G+ P+++T + LI+G C K  +E A+ + +D+  + ++P+V  YNTLI  + K
Sbjct: 736 YAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFK 795

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           EG +++AF + N MLD+G++PD +TY+ L+ G  ++GN+
Sbjct: 796 EGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 5/187 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F + G   + S +   L      L  N ++   ++  + K           KR  + G+ 
Sbjct: 653 FCRKGDMVNASQLLSELQEVG--LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIP 710

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             +     L+  L+KEGK      +Y EM  + I  +L +++ +++GLC  G+L  A  I
Sbjct: 711 CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKI 770

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +EDM    ++P V  YN LI G+ K+G + + ++   +  +M++ G++P++ T++ L++G
Sbjct: 771 LEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR---LHNEMLDKGLVPDDTTYDILVNG 827

Query: 269 FCKDENI 275
             KD N+
Sbjct: 828 KVKDGNL 834


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 208/366 (56%), Gaps = 7/366 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++   L+ A  +  K E+   + +EM+ R    NL ++N +++ LCK   +  A
Sbjct: 52  GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 111

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+++ M   G +P V+T+N L+DG+CK+G +    K   +   MV  G+ PN VT++ L
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK---LLGIMVAKGMRPNVVTYSAL 168

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK +    A +V EEM + G+     TY++LI+GLC   K++EA  +   M  SG 
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VV  +++I+ FCK   + +A+    ++ +Q  SP V+TYNT+ID  CK G++ +A  
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 288

Query: 386 MRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           + + M + G VLPDV TY+ +I GL +   +   + +++ +   G    +VTY  ++  L
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G+ ++A  LL     M++    PN+VTY  LI G C+  K+++A  ++ E+   G  
Sbjct: 349 CKCGRLEEAEYLLQ---GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405

Query: 505 PNQTTY 510
           PN  TY
Sbjct: 406 PNLVTY 411



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 218/420 (51%), Gaps = 26/420 (6%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H   E  +     G      +   ++ A+   G   D++     ++    + N+ ++  +
Sbjct: 7   HAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTAL 63

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +    +A KL +A  ++E+M+  G  P +VTYN+L+D  CK   +G    A  V K M+E
Sbjct: 64  IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG---AAQDVVKKMIE 120

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G  PN +TFN+L+DGFCK  N+  A K+   M + G+   VVTY++LI+GLC   K  E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  + +EM ASG+ P+  T +ALI+G CK   +E+A  +   ++  G +P V+ Y+++I 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MR 431
           A+CK G++ +A      M  +   PDV TYN +I GL + G +   + I++++  +G + 
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTY+ ++  LCK     +A  LLD M K       P++VTY  +I G C+ G+LE+A
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN---PDVVTYTTIIDGLCKCGRLEEA 357

Query: 492 NGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
             LL  +   G  PN  TY                + V EEM   G  P++  +   ++G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 204/363 (56%), Gaps = 5/363 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  K+  + G   +V++ N L+    K G  +D   +   M  + +  N+ +++ +++GL
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK+ K  +A +++E+MK+ GV+P   TY+ LI G CK     K+ +A+ + + M  +G  
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKAD---KIEEAEQMLRRMAGSGCT 229

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V ++++I  FCK   +  A K  +EM     +  VVTYN++I+GLC  GK+ EA  +
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 289

Query: 317 RDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
            D+M  SG + P+VVT + +ING CK  ++ +A+ L D + + G +P V+TY T+ID  C
Sbjct: 290 LDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K GR+E+A  +   M   G  P+V TY  LI+GL +   V+    +M E+ N G    LV
Sbjct: 350 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 409

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN +V  LC  G+ K+A  L+  M K  + +  P+  TY  ++        +++A  LL
Sbjct: 410 TYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 468

Query: 496 NEL 498
            ++
Sbjct: 469 EQM 471



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 211/416 (50%), Gaps = 9/416 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    L+ A+ +  K     +  +   + G   ++++ N L+ AL K       + V 
Sbjct: 56  NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M       N+ +FN +++G CK G ++ A  ++  M + G+ P VVTY+ LIDG CK 
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               K  +A  V ++M  +G+ P+  T++ LI G CK + I  A ++   M   G    V
Sbjct: 176 ---QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y+S+I+  C  GKL EA     EM      P+VVT N +I+G CK   + +A+V+ D 
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292

Query: 355 ISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           + E G + P V+TY+T+I+  CK   + +A  + + M   G  PDV TY  +I GL + G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +E    ++  +   G    +VTY  L+  LCK  K  +A  +++E   M      PN+V
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE---MRNAGCPPNLV 409

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLE--KGLIPNQTTYQIVREEMMEKGFIPDIE 527
           TYN ++ G C  G++++A  L+  + +      P+  TY+ +   +M    + + E
Sbjct: 410 TYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAE 465



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 173/318 (54%), Gaps = 10/318 (3%)

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C AG L+ A +++E+MKS G +P   T+  +I      G +      D     +   G  
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDL------DGAMDHLRSMGCD 54

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+  LI  F + + +  AMK+ EEM   G    +VTYN L++ LC    +  A  +
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M+  G  PNV+T N+L++GFCK+  V+ AR L   +  +G+ P+V+TY+ LID  CK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             +  +A  +   M   GV PD  TY+ LI GL +   +E    ++  +  +G    +V 
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y+ ++ A CK GK  +A   L E   M K++K P++VTYN +I G C+ GK+ +A  +L+
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQE---MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 497 ELLEKG-LIPNQTTYQIV 513
           ++ E G ++P+  TY  V
Sbjct: 292 QMQESGDVLPDVVTYSTV 309



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 6/232 (2%)

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G L  A+ L +EM ++G  P+  T   +I        ++ A    D +   G  P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY  LI A+ +  ++E+A  +   M +RG  P++ TYN L+  L +   V   ++++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++  G    ++T+N LV   CK G    A  LL  M     +   PN+VTY+ LI G C+
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA---KGMRPNVVTYSALIDGLCK 174

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
             K  +A  +L E+   G+ P+  TY  +   + +   I + E  +  ++G+
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 226


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 204/377 (54%), Gaps = 13/377 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F R G++G K +V   N LL AL+ E KF+ +  +Y  MK+  +  N+ ++N +L 
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  +++ A  +  +M + G  P  VTY  ++   CK G I    +    FK      
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK------ 241

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+   +N LIDG CK+  I  A+K+  EM  +G+   VV+Y+ +IN LCV G ++ A 
Sbjct: 242 --PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 315 ALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           AL  +M   G   N+ T   LI G F + KL E A  L+  + + G  P+V+ YNTLI  
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G +E+A  + + M   G LP+V+TY+ LI G ++ G++ G     N ++++G R  
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY  +V  LCK+    +A SL++   KM  E   PN +T+N  IKG C  G++E A  
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVE---KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 494 LLNELLEKGLIPNQTTY 510
           LL  +   G +PN TTY
Sbjct: 476 LLERMQGHGCLPNITTY 492



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+  +V+S + ++ +L   G  E    ++ +M  R  + N+ +F  ++ G    GKL 
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY 331

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D+ + M   G  P VV YN LI G C  G    + +A  V   M  +G LPN  T++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG---SLEEALQVCDQMQRSGCLPNVTTYS 388

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDGF K  ++  A + +  M SHG    VVTY  +++ LC +   D+A +L ++M   
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN +T N  I G C    VE A  L + +   G  P++ TYN L+DA  +  + E+A
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F +   +  R + P++ TYN ++ G SR G +     +  + +  G     +TYN ++ A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            CK GK K A  L++ +  M   K+W P+I+TY  LI G C    +E+A   L++ + +G
Sbjct: 569 YCKQGKVKIAAQLVERVSSM---KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625

Query: 503 LIPNQTTY 510
           + PN  T+
Sbjct: 626 ICPNFATW 633



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 11/334 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++  L +  +++    I++ MK  G++     +  +I+GY +   +G   +A  +F
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKR---VGSAEQALKMF 132

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             + E G  P    +N L+D    +        ++  M   G+   V TYN L+  LC +
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            ++D A  L  EM   G  P+ VT   +++  CK   ++ AR L          PSV  Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVY 247

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LID  CKEGR+E A  +   M+D GV P+V +Y+C+I  L   GNVE    +  ++  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G  A + T+  L+      GK  +A+ L   M +   E   PN+V YN LI G C  G 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE---PNVVAYNTLIHGLCSNGS 364

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           LE+A  + +++   G +PN TTY I+ +   + G
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 7/225 (3%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + ++  M     KN  F   +++   ++   +    N++  +  +     N +     
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTL--EGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  +R   +G   ++ + N+LL AL +  K+E+   +++E++ R ++ NL ++N VL G 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            +AG + +A  +       G +P  +TYN +I  YCK+G +    +       M E    
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WH 592

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           P+ +T+ +LI G C   NI  AM   ++  + GI     T+N+L+
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 247/509 (48%), Gaps = 58/509 (11%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS--LCRNSIIIDMLMLA 125
           R+LH        P I  F  + +   K    ST+  +LS   DS  +  N   +++L+ +
Sbjct: 49  RMLH----MHPPPSIADFTKLLISITKMKHYSTVL-SLSHQMDSFGIPPNIYTLNILINS 103

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           +    +    F    +    G + ++ + N L+R L  EGK  +V +++ +M     + N
Sbjct: 104 FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 163

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---- 241
           + ++  ++NGLCK G  + A  ++  M+     P VV Y  +ID  CK   + + +    
Sbjct: 164 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 223

Query: 242 ----------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                          A+  +MV + I+PN V F+T++D  CK+ 
Sbjct: 224 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 283

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A  V + M   G+   VVTYN+L++G C+  ++DEAV + D M+  G  P+VV+ +
Sbjct: 284 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 343

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LING+CK + +EKA  LF+++  + L P+ +TY+TL+   C  GR++DA A+ + M+ R
Sbjct: 344 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 403

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G +PD  +Y  L+  L +   ++    ++  +  + M   +  Y I++  +C+ G+ + A
Sbjct: 404 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 463

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L      +  +   PN+ TY ++I G CQ+G L +A+ L  E+  KG  PN  TY ++
Sbjct: 464 RDLFS---NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520

Query: 514 R----------------EEMMEKGFIPDI 526
                            +EM+ +GF  D+
Sbjct: 521 TRGFLRNNETLRGIQLLQEMLARGFSADV 549



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 201/379 (53%), Gaps = 6/379 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S+    +LL ++ K   +  V  +  +M    I  N+ + N ++N
Sbjct: 43  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +L  A  ++  +  LG  P + T+N LI G C +G IG++     +F  M+  G
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLH---LFDKMIGEG 159

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  + SAA+++   M        VV Y S+I+ LC D ++ +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P++ T N+LI+  C     +    L +++    + P+V+ ++T++DA 
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TYN L+ G      ++    + + +V  G    +
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y+ L+   CK  + +KA+ L +EM + E     PN VTY+ L+ G C  G+L+DA  L
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKEL---IPNTVTYSTLMHGLCHVGRLQDAIAL 396

Query: 495 LNELLEKGLIPNQTTYQIV 513
            +E++ +G IP+  +Y I+
Sbjct: 397 FHEMVTRGQIPDFVSYCIL 415



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 205/393 (52%), Gaps = 10/393 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +   + IID L     K+ +    F  F      G+  S+ + N L+ AL    ++
Sbjct: 195 CQPDVVVYTSIIDSL----CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 250

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           + V  +  EM   +I  N+  F+ V++ LCK GK+ +A D+++ M   GV P VVTYN L
Sbjct: 251 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +DG+C +    +M +A  VF  MV  G  P+ V+++TLI+G+CK + I  AM +FEEM  
Sbjct: 311 MDGHCLR---SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 367

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
             +    VTY++L++GLC  G+L +A+AL  EM+  G  P+ V+   L++  CK + +++
Sbjct: 368 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 427

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L   I    + P +  Y  +ID  C+ G +E A  + +++  +G+ P+V TY  +I 
Sbjct: 428 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 487

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL ++G +     +  E+   G      TYN++     ++ ++ + + LL EM       
Sbjct: 488 GLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML---ARG 544

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
              ++ T  VL++     G  +    +L+E L+
Sbjct: 545 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 19/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A + F  M+     P+   F  L+    K ++ S  + +  +M S GI   + T N LIN
Sbjct: 43  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C   +L  A ++  +++  G +PN+ T N LI G C +  + +   LFD +  +G  P
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 162

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V+TY TLI+  CK G    A  +  SM      PDV  Y  +I  L ++  V    N+ 
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+++ G+   + TYN L+ ALC   + K   +LL+EM      K  PN+V ++ ++   
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV---NSKIMPNVVIFSTVVDAL 279

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY------QIVREEMME----------KGFIPDI 526
           C++GK+ +A+ +++ ++++G+ PN  TY        +R EM E          KGF PD+
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 527 EGHMYNISG 535
             +   I+G
Sbjct: 340 VSYSTLING 348



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A++  + M+     P++     L+    K K       L   +   G+ P++ T N 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+++C   R+  AF++   +L  G  P+++T+N LI GL  EG +  V ++ ++++  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY  L+  LCK G +  A+ LL     ME+    P++V Y  +I   C+  ++ 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLR---SMEQGNCQPDVVVYTSIIDSLCKDRQVT 216

Query: 490 DANGLLNELLEKGLIPNQTTY 510
            A  L +E++ +G+ P+  TY
Sbjct: 217 QAFNLFSEMIHQGISPSIFTY 237



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           ++NT          ++DA +  N ML     P ++ +  L+  +++  +   V ++ +++
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G+   + T NIL+ + C   +   A S+L ++ K+  +   PNI T+N LI+G C +
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVE 142

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
           GK+ +   L ++++ +G  PN  TY
Sbjct: 143 GKIGEVLHLFDKMIGEGFQPNVVTY 167


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 219/436 (50%), Gaps = 49/436 (11%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  +    K       F +    GL   V++   LL  L  E +  +    + +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-- 237
                N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CKKG    
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+   A  +F +M E GI P+  T+N++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC     S A ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T N++I+GFCK+  ++ A  +F  ++ +G SP V T+ TLID YC   R++D   +
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  RG++ +  TYN LI G    G++    ++  +++++G+   +VT N L+  LC 
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 477

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK  ++ K             P+++TYN+LI G   +GK  +A  L
Sbjct: 478 NGKLKDAL----EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 495 LNELLEKGLIPNQTTY 510
             E+  +G++P+  TY
Sbjct: 534 YEEMPHRGIVPDTITY 549



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 251/506 (49%), Gaps = 59/506 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII------DML 122
           LLH L V  +  +   F H   +     +V T     +T  + LCR   I+      D +
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCRPNVVT----FTTLMNGLCREGRIVEAVALLDRM 210

Query: 123 MLAYVKNMKPHLG--FEAFKRAGDY--------------GLKSSVLSCNQLLRALVKEGK 166
           M   ++  +   G   +   + GD                +  +V+  + ++ +L K+G+
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             D + ++ EM+ + I  +L ++N ++ G C +G+ + A  ++++M    +SP VVTYN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI+ + K+G   K ++A  ++ +M+  GI+PN +T+N++IDGFCK + + AA  +F  M 
Sbjct: 331 LINAFVKEG---KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G +  V T+ +LI+G C   ++D+ + L  EM   GL  N VT N LI+GFC    + 
Sbjct: 388 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF----AMRNSMLD-------RGV 395
            A  L   +   G+ P ++T NTL+D  C  G+++DA     AM+ S +D        GV
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PDV TYN LI GL  EG       +  E+ + G+    +TY+ ++  LCK  +  +A  
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--- 512
           +      M  +   PN+VT+N LI G+C+ G+++D   L  E+  +G++ +   Y     
Sbjct: 568 MF---VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 624

Query: 513 -------------VREEMMEKGFIPD 525
                        + +EM+  G  PD
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPD 650



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 199/382 (52%), Gaps = 17/382 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+   + + N ++      G++ D E + +EM  R+I  ++ ++N ++N   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A+++ ++M   G+ P  +TYN +IDG+CK+    ++  A+ +F  M   G  P+
Sbjct: 338 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ---DRLDAAEDMFYLMATKGCSPD 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             TF TLIDG+C  + I   M++  EM   G+ A  VTYN+LI+G C+ G L+ A+ L  
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-----------GLSPSVITY 367
           +M++SG+ P++VT N L++G C    ++ A  +F  + +            G+ P V+TY
Sbjct: 455 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI     EG+  +A  +   M  RG++PD  TY+ +I GL ++  ++    +   + +
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VT+N L+   CK G+    + L  E   M +     + + Y  LI GF + G 
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCE---MGRRGIVADAIIYITLIYGFRKVGN 631

Query: 488 LEDANGLLNELLEKGLIPNQTT 509
           +  A  +  E++  G+ P+  T
Sbjct: 632 INGALDIFQEMISSGVYPDTIT 653



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 203/395 (51%), Gaps = 25/395 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+   +L+  +V+  + + V  +Y++M+R++I  ++ SFN ++   C   KL  A    
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P VVT+  L+ G C +    ++ +A   F  M E    PN VTF TL++G 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVE---DRVSEALDFFHQMFETTCRPNVVTFTTLMNGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPN 328
           C++  I  A+ + + M   G+    +TY ++++G+C  G    A+ L  +M   S + PN
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV  +A+I+  CK      A+ LF ++ E+G+ P + TYN++I  +C  GR  DA  +  
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+R + PDV TYN LI    +EG       + +E++  G+    +TYN ++   CK  
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374

Query: 449 KSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           +   A    ++MF +   K   P++ T+  LI G+C   +++D   LL+E+  +GL+ N 
Sbjct: 375 RLDAA----EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430

Query: 508 TTYQI----------------VREEMMEKGFIPDI 526
            TY                  + ++M+  G  PDI
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 465



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 210/406 (51%), Gaps = 9/406 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM   V+  +P L    +++     ++  + S N L++      K       + ++ +  
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  ++ +F  +L+GLC   ++++A D    M      P VVT+  L++G C++   G++ 
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCRE---GRIV 201

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG--SHGIAAGVVTYNS 299
           +A A+   M+E+G+ P ++T+ T++DG CK  +  +A+ +  +M   SH I   VV Y++
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSA 260

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+ LC DG+  +A  L  EM   G+ P++ T N++I GFC       A  L  ++ E+ 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           +SP V+TYN LI+A+ KEG+  +A  + + ML RG++P+  TYN +I G  ++  ++   
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++   +   G    + T+  L+   C   +    + LL E   M +     N VTYN LI
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE---MPRRGLVANTVTYNTLI 437

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            GFC  G L  A  L  +++  G+ P+  T   + + + + G + D
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 483



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 197/363 (54%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF +   +Y EM  R I  N  ++N +++G CK  +L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+   M + G SP V T+  LIDGYC   G  ++     +  +M   G++ N VT+NTLI
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYC---GAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GFC   +++AA+ + ++M S G+   +VT N+L++GLC +GKL +A+ +   M  S   
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V+T N LI G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M  SM  +   P+V T+N LI G  + G V+    +  E+   G+ A  +
Sbjct: 558 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 617

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  L+    K G    A+ +  EM        +P+ +T   ++ GF  K +LE A  +L
Sbjct: 618 IYITLIYGFRKVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGFWSKEELERAVAML 674

Query: 496 NEL 498
            +L
Sbjct: 675 EDL 677



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 167/321 (52%), Gaps = 13/321 (4%)

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV---FKDM 250
           +G  +   L  A D+  DM      P VV +  L+      G + +M + D V   ++ M
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKM 105

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
               I  +  +FN LI  FC    +  A+  F ++   G+   VVT+ +L++GLCV+ ++
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M  +  +PNVVT   L+NG C++  + +A  L D + E GL P+ ITY T+
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 371 IDAYCKEGRMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +D  CK+G    A  +   M +   ++P+V  Y+ +I  L ++G     +N+  E+   G
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   L TYN ++   C  G+   A  LL EM    + K  P++VTYN LI  F ++GK  
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFF 342

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L +E+L +G+IPN  TY
Sbjct: 343 EAAELYDEMLPRGIIPNTITY 363



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 159/297 (53%), Gaps = 20/297 (6%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F DM+ +  LP+ V F  L+    + E     + ++++M    I   + ++N LI   C
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              KL  A++   ++   GL P+VVT   L++G C +  V +A   F  + E    P+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+ TL++  C+EGR+ +A A+ + M++ G+ P   TY  ++ G+ ++G+     N++ ++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 426 VN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
              + +   +V Y+ ++ +LCKDG+   A +L  E   M+++  +P++ TYN +I GFC 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE---MQEKGIFPDLFTYNSMIVGFCS 302

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQ-----IVRE-----------EMMEKGFIPD 525
            G+  DA  LL E+LE+ + P+  TY       V+E           EM+ +G IP+
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 18/278 (6%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L  GF + + +  A+ +F +M        VV +  L+  +    + D  ++L  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ ++ + N LI  FC    +  A   F  I++ GL P V+T+ TL+   C E R+ +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + M +    P+V T+  L+ GL REG +     +++ ++ +G++   +TY  +V  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +  A++LL +M   E     PN+V Y+ +I   C+ G+  DA  L  E+ EKG+ 
Sbjct: 230 CKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           P+  TY                + + +EM+E+   PD+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 107/178 (60%), Gaps = 3/178 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  VL+ N L+  L+ EGKF + E +Y+EM  R I  +  +++ +++GLCK  +L++A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +   M S   SP VVT+N LI+GYCK G +    +   +F +M   GI+ + + + TL
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE---LFCEMGRRGIVADAIIYITL 622

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           I GF K  NI+ A+ +F+EM S G+    +T  +++ G     +L+ AVA+ +++  S
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 258/536 (48%), Gaps = 45/536 (8%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
           + I  ++    W  L + D     L+L +      L L++  W  K+  L   H + L  
Sbjct: 21  KSIYNILTIDRWGSLNHMDYRQARLRLVHGK----LALKFLKWVVKQPGLETDHIVQLVC 76

Query: 68  RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
              H LV A+ Y   R  L  + + +GK    S +F AL T       N  + D+L+  Y
Sbjct: 77  ITTHILVRARMYDPARHILKELSLMSGK---SSFVFGALMTTYRLCNSNPSVYDILIRVY 133

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++        E F+  G YG   SV +CN +L ++VK G+   V    KEM +R+I  ++
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
            +FN ++N LC  G   K+S +M+ M+  G +P +VTYN ++  YCKKG           
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 236 ----GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               G+                  ++ K   + +DM +  I PNEVT+NTLI+GF  +  
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++  EM S G++   VT+N+LI+G   +G   EA+ +   M A GL P+ V+   
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK    + AR  +  +   G+    ITY  +ID  CK G +++A  + N M   G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD+ TY+ LI G  + G  +  + I+  +   G+    + Y+ L+   C+ G  K+A+
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            + + M     E    +  T+NVL+   C+ GK+ +A   +  +   G++PN  ++
Sbjct: 494 RIYEAMI---LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 201/396 (50%), Gaps = 6/396 (1%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +     E        G+ + V + N L+  L +  +      + ++M++R I  N
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             ++N ++NG    GK+  AS ++ +M S G+SP  VT+N LIDG+  +G   +  K   
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK--- 354

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  M   G+ P+EV++  L+DG CK+     A   +  M  +G+  G +TY  +I+GLC
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G LDEAV L +EM   G+ P++VT +ALINGFCK    + A+ +   I   GLSP+ I
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y+TLI   C+ G +++A  +  +M+  G   D  T+N L+  L + G V      M  +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            ++G+    V+++ L+      G+  KA S+ DEM K+      P   TY  L+KG C+ 
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKG 591

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G L +A   L  L       +   Y  +   M + G
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 23/399 (5%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++ N L+   + EG F++   ++  M+ + +  +  S+  +L+GLCK  + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A      MK  GV    +TY  +IDG CK G + +   A  +  +M ++GI P+ VT++ 
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE---AVVLLNEMSKDGIDPDIVTYSA 443

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFCK      A ++   +   G++   + Y++LI   C  G L EA+ + + M+  G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              +  T N L+   CK   V +A      ++  G+ P+ ++++ LI+ Y   G    AF
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++ + M   G  P   TY  L+ GL + G++      +  L         V YN L+ A+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-L 503
           CK G   KAVSL  EM    +    P+  TY  LI G C+KGK   A     E   +G +
Sbjct: 624 CKSGNLAKAVSLFGEMV---QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDI 526
           +PN+  Y                   RE+M   G  PDI
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 193/384 (50%), Gaps = 23/384 (5%)

Query: 160  ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
             + K G+++   Y  ++M       ++ + N +++G  + GK+ K +D++ +M +    P
Sbjct: 693  GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752

Query: 220  KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             + TYNIL+ GY K+  +   +    +++ ++ NGILP+++T ++L+ G C+   +   +
Sbjct: 753  NLTTYNILLHGYSKRKDVSTSF---LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 280  KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            K+ +     G+     T+N LI+  C +G+++ A  L   M + G+  +  T +A+++  
Sbjct: 810  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 340  CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
             +    +++R++  ++S+QG+SP    Y  LI+  C+ G ++ AF ++  M+   + P  
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 400  STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
               + ++  L++ G  +    ++  ++   +   + ++  L+   CK+G   +A+ L   
Sbjct: 930  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL--- 986

Query: 460  MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------- 511
               M       ++V+YNVLI G C KG +  A  L  E+   G + N TTY+        
Sbjct: 987  RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046

Query: 512  ---------IVREEMMEKGFIPDI 526
                     I+ ++++ +GFI  +
Sbjct: 1047 RETAFSGADIILKDLLARGFITSM 1070



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 9/416 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K GK          ++  SD +  N++  D L+  Y  + +    F  F      G   +
Sbjct: 520 KAGKVAEAEEFMRCMT--SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             +   LL+ L K G   + E   K +      ++   +N +L  +CK+G L KA  +  
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGF 269
           +M    + P   TY  LI G C+KG   K   A    K+    G +LPN+V +   +DG 
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKG---KTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K     A +   E+M + G    +VT N++I+G    GK+++   L  EM      PN+
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N L++G+ K+K V  + +L+  I   G+ P  +T ++L+   C+   +E    +  +
Sbjct: 755 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
            + RGV  D  T+N LI+     G +    +++  + + G+     T + +V  L ++ +
Sbjct: 815 FICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 874

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +++  +L E   M K+   P    Y  LI G C+ G ++ A  +  E++   + P
Sbjct: 875 FQESRMVLHE---MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N   ++ LI  + ++  I  ++++F  MG +G    V T N+++  +   G+     +  
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM+   + P+V T N LIN  C +   EK+  L   + + G +P+++TYNT++  YCK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           GR + A  + + M  +GV  DV TYN LI  L R   +     ++ ++    +    VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N L+     +GK   A  LL+EM         PN VT+N LI G   +G  ++A  +   
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLS---PNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 498 LLEKGLIPNQTTYQIV 513
           +  KGL P++ +Y ++
Sbjct: 359 MEAKGLTPSEVSYGVL 374



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 4/246 (1%)

Query: 120  DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +ML+     N + +  F+  K     G+     +C+ ++  L +  +F++   V  EM +
Sbjct: 828  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 180  RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
            + I      +  ++NGLC+ G +  A  + E+M +  + P  V  + ++    K    GK
Sbjct: 888  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK---CGK 944

Query: 240  MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              +A  + + M++  ++P   +F TL+   CK+ N+  A+++   M + G+   +V+YN 
Sbjct: 945  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004

Query: 300  LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQ 358
            LI GLC  G +  A  L +EM   G   N  T  ALI G   ++     A ++  D+  +
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1064

Query: 359  GLSPSV 364
            G   S+
Sbjct: 1065 GFITSM 1070



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)

Query: 155  NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            + ++RAL K GK ++   + + M + ++   + SF  +++  CK G + +A ++   M +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 215  LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             G+   +V+YN+LI G C K   G M  A  ++++M  +G L N  T+  LI G    E 
Sbjct: 993  CGLKLDLVSYNVLITGLCAK---GDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049

Query: 275  -ISAAMKVFEEMGSHGIAAGVVTYNSL 300
              S A  + +++    +A G +T  SL
Sbjct: 1050 AFSGADIILKDL----LARGFITSMSL 1072


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/413 (34%), Positives = 212/413 (51%), Gaps = 46/413 (11%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           EA KR   +    +  + N L+ A VK G  +    VY+ M +  +  +  +FN ++N  
Sbjct: 75  EALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAF 134

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            KA +++    + E+M++   SP V+TY+ILID  CK GG+ K  K   VF DM   G  
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK---VFLDMKSRGCR 191

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  T+ ++IDG  K  ++  A  +FEEM S G+ A  V YNSLI+GL   G+ D A  L
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251

Query: 317 RDEMMASGLKPNVVT-----------------------------------SNALINGFCK 341
             EM++ GL+P+ VT                                    N LI+  CK
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            K +++A  +F ++ E GL P V T+N L+D  CK GR+ DAF +   M   G  PDV+ 
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN LI GL + G VE    ++ E+ + G    +VTYN L+   CK G+ + A+ L +E+ 
Sbjct: 372 YNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI- 430

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDA----NGLLNELLEKGLIPNQTTY 510
                K + N VTYN ++ G C  G++++A    NG+  E ++  + P+  TY
Sbjct: 431 ---SAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 209/416 (50%), Gaps = 15/416 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  FVK G       ++  +      L  ++   ++LM A+ K  +    ++ F+   
Sbjct: 94  SLIDAFVKAGYTQKALAVYRVMG--QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +     +V++ + L+ A+ K G  E    V+ +MK R    N+ ++  +++GL K+G ++
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA---VFKDMVENGILPNEV 260
           KA  + E+M S G+    V YN LI       G+G+  +ADA   +F++M+  G+ P+ V
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIH------GLGRSGRADAAAKLFREMLSKGLQPDHV 265

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF +L+ G       S A ++F+E    G A  V  YN LI+ LC   +LDEA  +  E+
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              GL P+V T NAL++G CK   +  A +L  D+   G +P V  YNTLID   K GR+
Sbjct: 326 EEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRV 385

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A  +   M   G  PDV TYN LI    + G +E    +  E+   G  A  VTYN +
Sbjct: 386 EEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTI 444

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGL 494
           +  LC  G+  +A  L + M K E       P+ VTY  L+ G  Q G  E AN L
Sbjct: 445 LNGLCMAGRVDEAYKLFNGM-KQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 199/376 (52%), Gaps = 6/376 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV +C  L+  L    +F + E V  E+++ R  L    F  +  G   AG L K+ + +
Sbjct: 18  SVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEAL 77

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           + M+    +     YN LID + K    G   KA AV++ M ++G+ P+  TFN L++ F
Sbjct: 78  KRMEGHRCALTASAYNSLIDAFVKA---GYTQKALAVYRVMGQSGLRPDTYTFNVLMNAF 134

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K + + +  K+FEEM +   +  V+TY+ LI+ +C  G +++A+ +  +M + G +PN+
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNI 194

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T  ++I+G  K   V+KA  LF++++ +GL  + + YN+LI    + GR + A  +   
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML +G+ PD  T+  L+ GL   G     R I  E  + G    +  YN+L+  LCK  +
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  +  E   +E++   P++ T+N L+ G C+ G++ DA  LL ++   G  P+ T 
Sbjct: 315 LDEAWEIFGE---LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371

Query: 510 YQIVREEMMEKGFIPD 525
           Y  + + + + G + +
Sbjct: 372 YNTLIDGLRKSGRVEE 387



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 157/309 (50%), Gaps = 9/309 (2%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALST-CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           P I ++  M    GK   V   F       S+ L    ++ + L+    ++ +     + 
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+     GL+   ++   L+  L   G+  +   +++E +     L+++ +N +++ LCK
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           + +L++A +I  +++  G+ P V T+N L+DG CK    G+++ A  +  DM   G  P+
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS---GRIHDAFILLGDMKRAGCTPD 368

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              +NTLIDG  K   +  A ++  EM S G    VVTYN+LI+  C  G++++A+ L +
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG----LSPSVITYNTLIDAY 374
           E+ A G   N VT N ++NG C    V++A  LF+ + ++     + P  +TY TL++  
Sbjct: 429 EISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGA 487

Query: 375 CKEGRMEDA 383
            + G  E A
Sbjct: 488 RQAGLSELA 496


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 207/377 (54%), Gaps = 9/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL       N L+R LV+ G+    + V+ EM+ R +   + SFN +++G+C+AG L+
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M   GV+P V TY  LI G C+   +G++  A  VF+ M   G+ PN V F 
Sbjct: 293 GAETLHRRMSEAGVTPDVYTYGALIQGLCR---VGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  CK  +    +++  EM   G+    VTYN+++NGLC    L  A  +  EM ++
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P+ VT   LI+G+CK++ ++ A  +  ++  +G+    +TY  LI    K GR  DA
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++ G+ PD +TY  +I    R+G+V+    ++ E+ N G + G+VTYN+++  
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G+ K A  LL+ M  +      P+ +TYN+L+ G C+ GK+ D   L +    KG 
Sbjct: 530 FCKLGQMKNADMLLNAMINI---GVSPDDITYNILLDGHCKHGKVTDIEELKS---AKGT 583

Query: 504 IPNQTTYQIVREEMMEK 520
           +P+   Y  +  E+++K
Sbjct: 584 VPDLGVYTSIVGEIVKK 600



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 191/339 (56%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++  L + G+L  A ++ ++M+S GV   VV++N +I G C+ G +     A+ + +
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDG---AETLHR 299

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M E G+ P+  T+  LI G C+   I  A  VFE+M   G+    V +  LI+  C  G
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +  + L  EM   G++P+ VT NA++NG C+ + ++ A  +  ++   GL P  +TY 
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 419

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YCKE  ++ A  ++ +M+  GV  D  TY  LI+GLS+ G       ++ E++  
Sbjct: 420 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 479

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+     TY +++ A C+ G  K  + LL EM   + + + P +VTYNV++ GFC+ G++
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM---QNKGRKPGVVTYNVIMNGFCKLGQM 536

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++A+ LLN ++  G+ P+  TY I+ +   + G + DIE
Sbjct: 537 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE 575



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 3/280 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A A +  +++ G+ P    FN L+    +   +++A  VF+EM S G+   VV++N++I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G+C  G LD A  L   M  +G+ P+V T  ALI G C+   +E AR +F+ +  +G+ 
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ + +  LIDA+CK+G  E    +   M +RGV PD  TYN ++ GL R  +++    I
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+ + G+R   VTY  L+   CK+ +   A+ +   M     E    + VTY  LI G
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV---AEGVGLDEVTYTALISG 459

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + G+  DA  +L E++E GL P+ TTY +V +    KG
Sbjct: 460 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 170/312 (54%), Gaps = 6/312 (1%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           +R  + G+   V +   L++ L + G+ ED   V+++M  R ++ N   F  +++  CK 
Sbjct: 299 RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKK 358

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G      ++  +M+  GV P  VTYN +++G C+      +  A  +  +M   G+ P+ 
Sbjct: 359 GDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA---RDLKSASGIVVEMRSAGLRPDT 415

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+ TLIDG+CK+E +  AM++ + M + G+    VTY +LI+GL   G+  +A  +  E
Sbjct: 416 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 475

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           MM +GL+P+  T   +I+ FC+K  V+    L  ++  +G  P V+TYN +++ +CK G+
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 535

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M++A  + N+M++ GV PD  TYN L+ G  + G V  +  + +     G    L  Y  
Sbjct: 536 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTS 592

Query: 440 LVGALCKDGKSK 451
           +VG + K   +K
Sbjct: 593 IVGEIVKKKTTK 604



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 150/269 (55%), Gaps = 6/269 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++    G+K + +    L+ A  K+G  E +  +++EM+ R +  +  ++N ++NGLC+
Sbjct: 333 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 392

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A  L  AS I+ +M+S G+ P  VTY  LIDGYCK+    ++  A  + ++MV  G+  +
Sbjct: 393 ARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE---EELDMAMEIKQNMVAEGVGLD 449

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           EVT+  LI G  K    + A +V  EM   G+     TY  +I+  C  G +   + L  
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   G KP VVT N ++NGFCK   ++ A +L + +   G+SP  ITYN L+D +CK G
Sbjct: 510 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 569

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           ++ D   ++++   +G +PD+  Y  ++ 
Sbjct: 570 KVTDIEELKSA---KGTVPDLGVYTSIVG 595



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 143/294 (48%), Gaps = 8/294 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +    + G+      +F  +  C   +  N+++  +L+ A+ K        E  +   
Sbjct: 315 ALIQGLCRVGRIEDARGVFEKM--CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 372

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++   ++ N ++  L +    +    +  EM+   +  +  ++  +++G CK  +L+
Sbjct: 373 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 432

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I ++M + GV    VTY  LI G  K    G+   A+ V  +M+E G+ P+  T+ 
Sbjct: 433 MAMEIKQNMVAEGVGLDEVTYTALISGLSKA---GRSADAERVLGEMMEAGLEPDNTTYT 489

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FC+  ++   +++ +EM + G   GVVTYN ++NG C  G++  A  L + M+  
Sbjct: 490 MVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINI 549

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           G+ P+ +T N L++G CK   V     L    S +G  P +  Y +++    K+
Sbjct: 550 GVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIVGEIVKK 600



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 51/200 (25%)

Query: 374 YCKEGRMEDA-----FAMRN---------------------------SMLDRGVLPDVST 401
           Y +EG + DA      A+R                             +LD G+ P+   
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKL 242

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N L+  L R G +   +N+ +E+ + G+R  +V++N ++  +C+ G    A +L     
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL---HR 299

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
           +M +    P++ TY  LI+G C+ G++EDA G+  ++  +G+ PN   + I         
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359

Query: 513 -------VREEMMEKGFIPD 525
                  +  EM E+G  PD
Sbjct: 360 DAETMLELHREMRERGVRPD 379


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 247/509 (48%), Gaps = 58/509 (11%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS--LCRNSIIIDMLMLA 125
           R+LH        P I  F  + +   K    ST+  +LS   DS  +  N   +++L+ +
Sbjct: 58  RMLH----MHPPPSIADFTKLLISITKMKHYSTVL-SLSHQMDSFGIPPNIYTLNILINS 112

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           +    +    F    +    G + ++ + N L+R L  EGK  +V +++ +M     + N
Sbjct: 113 FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 172

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---- 241
           + ++  ++NGLCK G  + A  ++  M+     P VV Y  +ID  CK   + + +    
Sbjct: 173 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 232

Query: 242 ----------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                          A+  +MV + I+PN V F+T++D  CK+ 
Sbjct: 233 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 292

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A  V + M   G+   VVTYN+L++G C+  ++DEAV + D M+  G  P+VV+ +
Sbjct: 293 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 352

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LING+CK + +EKA  LF+++  + L P+ +TY+TL+   C  GR++DA A+ + M+ R
Sbjct: 353 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 412

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G +PD  +Y  L+  L +   ++    ++  +  + M   +  Y I++  +C+ G+ + A
Sbjct: 413 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 472

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L      +  +   PN+ TY ++I G CQ+G L +A+ L  E+  KG  PN  TY ++
Sbjct: 473 RDLFS---NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529

Query: 514 R----------------EEMMEKGFIPDI 526
                            +EM+ +GF  D+
Sbjct: 530 TRGFLRNNETLRGIQLLQEMLARGFSADV 558



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 201/379 (53%), Gaps = 6/379 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S+    +LL ++ K   +  V  +  +M    I  N+ + N ++N
Sbjct: 52  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +L  A  ++  +  LG  P + T+N LI G C +G IG++     +F  M+  G
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLH---LFDKMIGEG 168

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  + SAA+++   M        VV Y S+I+ LC D ++ +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P++ T N+LI+  C     +    L +++    + P+V+ ++T++DA 
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TYN L+ G      ++    + + +V  G    +
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y+ L+   CK  + +KA+ L +EM + E     PN VTY+ L+ G C  G+L+DA  L
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKEL---IPNTVTYSTLMHGLCHVGRLQDAIAL 405

Query: 495 LNELLEKGLIPNQTTYQIV 513
            +E++ +G IP+  +Y I+
Sbjct: 406 FHEMVTRGQIPDFVSYCIL 424



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 205/393 (52%), Gaps = 10/393 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +   + IID L     K+ +    F  F      G+  S+ + N L+ AL    ++
Sbjct: 204 CQPDVVVYTSIIDSL----CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 259

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           + V  +  EM   +I  N+  F+ V++ LCK GK+ +A D+++ M   GV P VVTYN L
Sbjct: 260 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +DG+C +    +M +A  VF  MV  G  P+ V+++TLI+G+CK + I  AM +FEEM  
Sbjct: 320 MDGHCLR---SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 376

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
             +    VTY++L++GLC  G+L +A+AL  EM+  G  P+ V+   L++  CK + +++
Sbjct: 377 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 436

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L   I    + P +  Y  +ID  C+ G +E A  + +++  +G+ P+V TY  +I 
Sbjct: 437 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 496

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL ++G +     +  E+   G      TYN++     ++ ++ + + LL EM       
Sbjct: 497 GLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML---ARG 553

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
              ++ T  VL++     G  +    +L+E L+
Sbjct: 554 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 19/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A + F  M+     P+   F  L+    K ++ S  + +  +M S GI   + T N LIN
Sbjct: 52  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C   +L  A ++  +++  G +PN+ T N LI G C +  + +   LFD +  +G  P
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 171

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V+TY TLI+  CK G    A  +  SM      PDV  Y  +I  L ++  V    N+ 
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+++ G+   + TYN L+ ALC   + K   +LL+EM      K  PN+V ++ ++   
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV---NSKIMPNVVIFSTVVDAL 288

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY------QIVREEMME----------KGFIPDI 526
           C++GK+ +A+ +++ ++++G+ PN  TY        +R EM E          KGF PD+
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 527 EGHMYNISG 535
             +   I+G
Sbjct: 349 VSYSTLING 357



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A++  + M+     P++     L+    K K       L   +   G+ P++ T N 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+++C   R+  AF++   +L  G  P+++T+N LI GL  EG +  V ++ ++++  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY  L+  LCK G +  A+ LL     ME+    P++V Y  +I   C+  ++ 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRS---MEQGNCQPDVVVYTSIIDSLCKDRQVT 225

Query: 490 DANGLLNELLEKGLIPNQTTY 510
            A  L +E++ +G+ P+  TY
Sbjct: 226 QAFNLFSEMIHQGISPSIFTY 246



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           ++NT          ++DA +  N ML     P ++ +  L+  +++  +   V ++ +++
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G+   + T NIL+ + C   +   A S+L ++ K+  +   PNI T+N LI+G C +
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVE 151

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
           GK+ +   L ++++ +G  PN  TY
Sbjct: 152 GKIGEVLHLFDKMIGEGFQPNVVTY 176


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 233/467 (49%), Gaps = 57/467 (12%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N   + + M  + +  +  LGF    +    GL+ ++++   L+  L K G+F    
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAV 183

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGK------------------------------ 201
            ++ +M  +  + ++ ++N ++NGLCK G+                              
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243

Query: 202 -----LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
                +N+A DI   MK+ G+SP + TY  LI G CK     +  +A A+  +M    I+
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK---FSRWKEASALLNEMTSLNIM 300

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VTFN L+D FCK+  +S A+ V + M   G+   VVTY+SL+ G  +   + EA  L
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M+  G KPN+ + N LING+CK K +++A  LF+++  QGL+P+ ++YNTLI  +C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G++ +A  +  +M   G LPD+ TY+ L+ G  ++G +     +   + +  ++  LV 
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y ILV A+CK G  K A  L  E+F    +   P++  Y  +I G C++G L++A     
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELF---VQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537

Query: 497 ELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIE 527
            +   G  P++ +Y ++                  EM ++GFI D+ 
Sbjct: 538 NMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 212/369 (57%), Gaps = 7/369 (1%)

Query: 156 QLLRALVKEGKFEDVEY-VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           +LL A+VK G++ DV   + K+M+   +  N+ + +  +N  C+  +++    ++  +  
Sbjct: 97  KLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIK 156

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           LG+ P +VT+  LI+G CK   +G+  +A  +F DMV  G  P+  T+NT+I+G CK   
Sbjct: 157 LGLQPTIVTFTTLINGLCK---VGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +AA  + ++M   G    +VTY++LI+ LC D  ++EA+ +   M A G+ P++ T  +
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI G CK    ++A  L ++++   + P ++T+N L+D +CKEG++ +A  +  +M + G
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V P+V TY+ L+ G S   +V   R + + ++  G +  + +YNIL+   CK  +  +A+
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L +EM     +   PN V+YN LI GFCQ GKL +A  L   +   G +P+  TY I+ 
Sbjct: 394 QLFNEMI---HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILL 450

Query: 515 EEMMEKGFI 523
           +   ++G++
Sbjct: 451 DGFCKQGYL 459



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL-NKASDIMEDMKSLGVSPKVVTYNI 226
           +D    +  M  R+    +  F  +L+ + K G+  +    + + M+ +G+SP + T +I
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            ++ +C+   + ++    +V   +++ G+ P  VTF TLI+G CK    + A+++F++M 
Sbjct: 134 FMNCFCQ---LQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G    V TYN++INGLC  G+   A  L  +M  +G +PN+VT + LI+  C+ +LV 
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +F  +  +G+SP + TY +LI   CK  R ++A A+ N M    ++PD+ T+N L+
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
               +EG V     ++  +   G+   +VTY+ L+          +A  L   M  + K 
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM--ITKG 368

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            K PNI +YN+LI G+C+  ++++A  L NE++ +GL PN  +Y
Sbjct: 369 CK-PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSY 411



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 185/355 (52%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+ ++ + L              + F      G+   + +   L++ L K  
Sbjct: 237 STLIDSLCRDRLVNEAL--------------DIFSYMKAKGISPDIFTYTSLIQGLCKFS 282

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++++   +  EM    I  ++ +FN +++  CK GK+++A  +++ M  +GV P VVTY+
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS 342

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+ GY     +    +A  +F  M+  G  PN  ++N LI+G+CK + I  AM++F EM
Sbjct: 343 SLMYGYSLWTDV---VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    V+YN+LI+G C  GKL EA  L   M  +G  P++ T + L++GFCK+  +
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            KA  LF  +    L P+++ Y  L+ A CK G  +DA  + + +  +G+ P V  Y  +
Sbjct: 460 GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I GL +EG ++        +  +G     ++YN+++  L +     +A+ L+ EM
Sbjct: 520 INGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEM 574



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 8/230 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L H ++     P I S+   ++ + K  +      +F+ +      L  N++  + L+ 
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM--IHQGLTPNNVSYNTLIH 416

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +  K     + F+     G    + + + LL    K+G       +++ M+   ++ 
Sbjct: 417 GFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKP 476

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           NL  +  +++ +CK+G    A  +  ++   G+ P V  Y  +I+G CK+G + +  +A 
Sbjct: 477 NLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEA- 535

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             F++M  +G  P+E+++N +I G  + ++ S A+ +  EM   G  A V
Sbjct: 536 --FRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 55/222 (24%)

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG------------ 413
           TY    DA      ++DA A  N ML R  LP +  +  L++ + + G            
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 414 --------NVEGVRNIMN----------------ELVNNGMRAGLVTYNILVGALCKDGK 449
                   N+  +   MN                +++  G++  +VT+  L+  LCK G+
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +AV L D+M     +   P++ TYN +I G C+ G+   A GLL ++ E G  PN  T
Sbjct: 179 FAQAVELFDDMV---AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVT 235

Query: 510 Y----------QIVREE------MMEKGFIPDIEGHMYNISG 535
           Y          ++V E       M  KG  PDI  +   I G
Sbjct: 236 YSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 258/536 (48%), Gaps = 45/536 (8%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
           + I  ++    W  L + D     L+L +      L L++  W  K+  L   H + L  
Sbjct: 61  KSIYNILTIDRWGSLNHMDYRQARLRLVHGK----LALKFLKWVVKQPGLETDHIVQLVC 116

Query: 68  RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
              H LV A+ Y   R  L  + + +GK    S +F AL T       N  + D+L+  Y
Sbjct: 117 ITTHILVRARMYDPARHILKELSLMSGK---SSFVFGALMTTYRLCNSNPSVYDILIRVY 173

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++        E F+  G YG   SV +CN +L ++VK G+   V    KEM +R+I  ++
Sbjct: 174 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 233

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
            +FN ++N LC  G   K+S +M+ M+  G +P +VTYN ++  YCKKG           
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293

Query: 236 ----GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               G+                  ++ K   + +DM +  I PNEVT+NTLI+GF  +  
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++  EM S G++   VT+N+LI+G   +G   EA+ +   M A GL P+ V+   
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK    + AR  +  +   G+    ITY  +ID  CK G +++A  + N M   G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD+ TY+ LI G  + G  +  + I+  +   G+    + Y+ L+   C+ G  K+A+
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            + + M     E    +  T+NVL+   C+ GK+ +A   +  +   G++PN  ++
Sbjct: 534 RIYEAMI---LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 201/396 (50%), Gaps = 6/396 (1%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +     E        G+ + V + N L+  L +  +      + ++M++R I  N
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             ++N ++NG    GK+  AS ++ +M S G+SP  VT+N LIDG+  +G   +  K   
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK--- 394

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  M   G+ P+EV++  L+DG CK+     A   +  M  +G+  G +TY  +I+GLC
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G LDEAV L +EM   G+ P++VT +ALINGFCK    + A+ +   I   GLSP+ I
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y+TLI   C+ G +++A  +  +M+  G   D  T+N L+  L + G V      M  +
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            ++G+    V+++ L+      G+  KA S+ DEM K+      P   TY  L+KG C+ 
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKG 631

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G L +A   L  L       +   Y  +   M + G
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 23/399 (5%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++ N L+   + EG F++   ++  M+ + +  +  S+  +L+GLCK  + + 
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A      MK  GV    +TY  +IDG CK G + +   A  +  +M ++GI P+ VT++ 
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE---AVVLLNEMSKDGIDPDIVTYSA 483

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFCK      A ++   +   G++   + Y++LI   C  G L EA+ + + M+  G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              +  T N L+   CK   V +A      ++  G+ P+ ++++ LI+ Y   G    AF
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++ + M   G  P   TY  L+ GL + G++      +  L         V YN L+ A+
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-L 503
           CK G   KAVSL  EM    +    P+  TY  LI G C+KGK   A     E   +G +
Sbjct: 664 CKSGNLAKAVSLFGEMV---QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDI 526
           +PN+  Y                   RE+M   G  PDI
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 193/385 (50%), Gaps = 23/385 (5%)

Query: 160  ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
             + K G+++   Y  ++M       ++ + N +++G  + GK+ K +D++ +M +    P
Sbjct: 733  GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792

Query: 220  KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             + TYNIL+ GY K+  +   +    +++ ++ NGILP+++T ++L+ G C+   +   +
Sbjct: 793  NLTTYNILLHGYSKRKDVSTSF---LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 280  KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            K+ +     G+     T+N LI+  C +G+++ A  L   M + G+  +  T +A+++  
Sbjct: 850  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909

Query: 340  CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
             +    +++R++  ++S+QG+SP    Y  LI+  C+ G ++ AF ++  M+   + P  
Sbjct: 910  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969

Query: 400  STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
               + ++  L++ G  +    ++  ++   +   + ++  L+   CK+G   +A+ L   
Sbjct: 970  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL--- 1026

Query: 460  MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------- 511
               M       ++V+YNVLI G C KG +  A  L  E+   G + N TTY+        
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1086

Query: 512  ---------IVREEMMEKGFIPDIE 527
                     I+ ++++ +GFI  + 
Sbjct: 1087 RETAFSGADIILKDLLARGFITSMS 1111



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 9/416 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K GK          ++  SD +  N++  D L+  Y  + +    F  F      G   +
Sbjct: 560 KAGKVAEAEEFMRCMT--SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             +   LL+ L K G   + E   K +      ++   +N +L  +CK+G L KA  +  
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 677

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGF 269
           +M    + P   TY  LI G C+KG   K   A    K+    G +LPN+V +   +DG 
Sbjct: 678 EMVQRSILPDSYTYTSLISGLCRKG---KTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K     A +   E+M + G    +VT N++I+G    GK+++   L  EM      PN+
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N L++G+ K+K V  + +L+  I   G+ P  +T ++L+   C+   +E    +  +
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 854

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
            + RGV  D  T+N LI+     G +    +++  + + G+     T + +V  L ++ +
Sbjct: 855 FICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 914

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +++  +L E   M K+   P    Y  LI G C+ G ++ A  +  E++   + P
Sbjct: 915 FQESRMVLHE---MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N   ++ LI  + ++  I  ++++F  MG +G    V T N+++  +   G+     +  
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM+   + P+V T N LIN  C +   EK+  L   + + G +P+++TYNT++  YCK+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           GR + A  + + M  +GV  DV TYN LI  L R   +     ++ ++    +    VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N L+     +GK   A  LL+EM         PN VT+N LI G   +G  ++A  +   
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLS---PNHVTFNALIDGHISEGNFKEALKMFYM 398

Query: 498 LLEKGLIPNQTTYQIV 513
           +  KGL P++ +Y ++
Sbjct: 399 MEAKGLTPSEVSYGVL 414



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 4/247 (1%)

Query: 119  IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
             +ML+     N + +  F+  K     G+     +C+ ++  L +  +F++   V  EM 
Sbjct: 867  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926

Query: 179  RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            ++ I      +  ++NGLC+ G +  A  + E+M +  + P  V  + ++    K    G
Sbjct: 927  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK---CG 983

Query: 239  KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            K  +A  + + M++  ++P   +F TL+   CK+ N+  A+++   M + G+   +V+YN
Sbjct: 984  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043

Query: 299  SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISE 357
             LI GLC  G +  A  L +EM   G   N  T  ALI G   ++     A ++  D+  
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1103

Query: 358  QGLSPSV 364
            +G   S+
Sbjct: 1104 RGFITSM 1110



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)

Query: 155  NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            + ++RAL K GK ++   + + M + ++   + SF  +++  CK G + +A ++   M +
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032

Query: 215  LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             G+   +V+YN+LI G C K   G M  A  ++++M  +G L N  T+  LI G    E 
Sbjct: 1033 CGLKLDLVSYNVLITGLCAK---GDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1089

Query: 275  -ISAAMKVFEEMGSHGIAAGVVTYNSL 300
              S A  + +++    +A G +T  SL
Sbjct: 1090 AFSGADIILKDL----LARGFITSMSL 1112


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 232/456 (50%), Gaps = 37/456 (8%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           + +F + S++ H L+    S  +  +  ++++ +YV++   +L    F    D G     
Sbjct: 71  HSQFFTSSSLLHYLTESETSKTKFRLY-EVIINSYVQSQSLNLSISYFNEMVDNGFVPGS 129

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
              N LL  +V    F      + E K + + L++ SF  ++ G C+AG++ K+ D++ +
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIE 188

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGK--------------------------MYKADA 245
           +   G SP VV Y  LIDG CKKG I K                          ++K   
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248

Query: 246 ------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
                 +++ M E+G+ PN  T+N +++  CKD     A +VF+EM   G++  +VTYN+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI GLC + KL+EA  + D+M + G+ PN++T N LI+GFC    + KA  L  D+  +G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           LSPS++TYN L+  +C++G    A  M   M +RG+ P   TY  LI   +R  N+E   
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +   +   G+   + TY++L+   C  G+  +A  L   M +   E   PN V YN +I
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE---PNEVIYNTMI 485

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            G+C++G    A  LL E+ EK L PN  +Y+ + E
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 214/378 (56%), Gaps = 6/378 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+      ++G   +V+    L+    K+G+ E  + ++ EM +  +  N  ++  ++NG
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K G   +  ++ E M+  GV P + TYN +++  CK G   +   A  VF +M E G+
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG---RTKDAFQVFDEMRERGV 299

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N VT+NTLI G C++  ++ A KV ++M S GI   ++TYN+LI+G C  GKL +A++
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L  ++ + GL P++VT N L++GFC+K     A  +  ++ E+G+ PS +TY  LID + 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +   ME A  +R SM + G++PDV TY+ LI G   +G +     +   +V        V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN ++   CK+G S +A+ LL E   ME+++  PN+ +Y  +I+  C++ K ++A  L+
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKE---MEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536

Query: 496 NELLEKGLIPNQTTYQIV 513
            ++++ G+ P+ +   ++
Sbjct: 537 EKMIDSGIDPSTSILSLI 554



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 186/319 (58%), Gaps = 3/319 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +L+    KN     GFE +++  + G+  ++ + N ++  L K+G+ +D  
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V+ EM+ R +  N+ ++N ++ GLC+  KLN+A+ +++ MKS G++P ++TYN LIDG+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C   G+GK+ KA ++ +D+   G+ P+ VT+N L+ GFC+  + S A K+ +EM   GI 
Sbjct: 349 C---GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+       +++A+ LR  M   GL P+V T + LI+GFC K  + +A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E+   P+ + YNT+I  YCKEG    A  +   M ++ + P+V++Y  +I  L +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525

Query: 412 EGNVEGVRNIMNELVNNGM 430
           E   +    ++ +++++G+
Sbjct: 526 ERKSKEAERLVEKMIDSGI 544



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 190/395 (48%), Gaps = 52/395 (13%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           + FN++L  +  +   N+      + KS  V   V ++ ILI G C+ G I K +    +
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFD---L 185

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             ++ E G  PN V + TLIDG CK   I  A  +F EMG  G+ A   TY  LINGL  
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +G   +   + ++M   G+ PN+ T N ++N  CK    + A  +FD++ E+G+S +++T
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI   C+E ++ +A  + + M   G+ P++ TYN LI G    G +    ++  +L 
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------------------- 460
           + G+   LVTYNILV   C+ G +  A  ++ EM                          
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 461 ------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
                   ME+    P++ TY+VLI GFC KG++ +A+ L   ++EK   PN+  Y    
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485

Query: 513 --------------VREEMMEKGFIPDIEGHMYNI 533
                         + +EM EK   P++  + Y I
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 181/364 (49%), Gaps = 58/364 (15%)

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN---------------- 263
           K   Y ++I+ Y +   +     + + F +MV+NG +P    FN                
Sbjct: 93  KFRLYEVIINSYVQSQSLNL---SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149

Query: 264 ------------------TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
                              LI G C+   I  +  +  E+   G +  VV Y +LI+G C
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G++++A  L  EM   GL  N  T   LING  K  + ++   +++ + E G+ P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN +++  CK+GR +DAF + + M +RGV  ++ TYN LI GL RE  +     +++++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            ++G+   L+TYN L+   C  GK  KA+SL  +   ++     P++VTYN+L+ GFC+K
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD---LKSRGLSPSLVTYNILVSGFCRK 386

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEK-----------GFIPDIEGH 529
           G    A  ++ E+ E+G+ P++ TY I+     R + MEK           G +PD+  H
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV--H 444

Query: 530 MYNI 533
            Y++
Sbjct: 445 TYSV 448


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 211/361 (58%), Gaps = 8/361 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +L+ L + G   +   + +EM R+ +  ++ S+N ++NGLCKA KL +A  ++ +M++
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P  VT   L+DG CK    G+M +A  + + M + G   + V + TLI GFC + N
Sbjct: 62  AGCFPNSVTCTTLMDGLCKD---GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +    ++F+EM   GI+A VVTY+ L++GLC  G+  EA  + + M   G+ P+VVT   
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+G CK      A  L + + E+G  PS +TYN L+   CKEG + DAF +   M+++G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN--NGMRAGLVTYNILVGALCKDGKSKK 452
              DV TYN L+ GL  +G V+    + N + +  N +   + T+N+L+G LCK+G+  K
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           AV +     KM K+    N+VTYN+L+ G  + GK+++A  L  ++L+ G +PN  TY I
Sbjct: 299 AVKI---HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355

Query: 513 V 513
           +
Sbjct: 356 L 356



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/353 (36%), Positives = 199/353 (56%), Gaps = 20/353 (5%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            N VL GLC+ G + +A  ++ +M    VSP +V+YN LI+G CK     K+ +A  +  
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAK---KLKEAVGLLL 57

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G  PN VT  TL+DG CKD  +  AM++ E M   G  A VV Y +LI+G C +G
Sbjct: 58  EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LD    L DEM+  G+  NVVT + L++G C+    ++A  + + ++E G+ P V+TY 
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LID  CK+GR   A  + N M+++G  P   TYN L++GL +EG V     I+  ++  
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G +A +VTYN L+  LC  GK  +A+ L + MF  E   + PN+ T+N+LI G C++G+L
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE-PNVFTFNMLIGGLCKEGRL 296

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------VREEM------MEKGFIPD 525
             A  +  ++++KG   N  TY +          ++E M      ++ GF+P+
Sbjct: 297 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 349



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 207/391 (52%), Gaps = 11/391 (2%)

Query: 136 FEAFKRAGDYGLKS---SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           FEA     + G KS    ++S N L+  L K  K ++   +  EM+      N  +   +
Sbjct: 15  FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTL 74

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCK G++++A +++E MK  G    VV Y  LI G+C  G +    +   +F +M+ 
Sbjct: 75  MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD---RGKELFDEMLG 131

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI  N VT++ L+ G C+      A  V   M  HGI   VVTY  LI+GLC DG+   
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ L + M+  G +P+ VT N L++G CK+ LV  A  +   + E+G    V+TYNTL+ 
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251

Query: 373 AYCKEGRMEDAFAMRNSMLD--RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
             C +G++++A  + NSM D    + P+V T+N LI GL +EG +     I  ++V  G 
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 311

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              LVTYN+L+G   K GK K+A+ L  ++  +      PN  TY++LI GFC+   L  
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL---GFVPNSFTYSILIDGFCKMRMLNI 368

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           A GL  E+   GL P    Y  +   + ++G
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 217/429 (50%), Gaps = 24/429 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS+    LM    K+ +     E  +     G  + V+    L+      G  +  + ++
Sbjct: 67  NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 126

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + I  N+ +++ +++GLC+ G+  +A+ ++  M   G+ P VVTY  LIDG CK 
Sbjct: 127 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 186

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G+   A  +   MVE G  P+ VT+N L+ G CK+  +  A K+   M   G  A V
Sbjct: 187 ---GRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMM--ASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           VTYN+L+ GLC  GK+DEA+ L + M    + L+PNV T N LI G CK+  + KA  + 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + ++G   +++TYN L+    K G++++A  +   +LD G +P+  TY+ LI G  + 
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +   + +  E+  +G+   L  YN L+ +LCK+G  ++A SL  EM     E   P+I
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE---PDI 420

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REE 516
           +++N +I G  + G  +    L  +++E GL P+  T+  +                 E 
Sbjct: 421 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALER 480

Query: 517 MMEKGFIPD 525
           M+  GF PD
Sbjct: 481 MVASGFTPD 489



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 216/425 (50%), Gaps = 37/425 (8%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           ++   L+  +  N     G E F      G+ ++V++ + L+  L + G++++   V   
Sbjct: 104 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 163

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    I  ++ ++  +++GLCK G+   A D++  M   G  P  VTYN+L+ G CK+G 
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223

Query: 237 I--------------------------------GKMYKADAVFKDMV--ENGILPNEVTF 262
           +                                GK+ +A  +F  M   EN + PN  TF
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI G CK+  ++ A+K+  +M   G    +VTYN L+ G    GK+ EA+ L  +++ 
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  PN  T + LI+GFCK +++  A+ LF ++   GL+P++  YNTL+ + CKEG +E 
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 403

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A ++   M +    PD+ ++N +I G  + G+ + V+ +  ++V  G+R   +T++ L+ 
Sbjct: 404 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 463

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            L K G+  +A S L+   +M      P+ + Y+ L+KG   KG   +   LL+++  KG
Sbjct: 464 RLSKLGELDEAKSALE---RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 503 LIPNQ 507
            + ++
Sbjct: 521 TVLDR 525



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 197/384 (51%), Gaps = 23/384 (5%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L++ V+ G+  S  T    LS     LC+  ++ID               F+  +   +
Sbjct: 195 LLNLMVEKGEEPSNVTYNVLLS----GLCKEGLVID--------------AFKILRMMIE 236

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM--KRRRIELNLDSFNFVLNGLCKAGKL 202
            G K+ V++ N L++ L  +GK ++   ++  M      +E N+ +FN ++ GLCK G+L
Sbjct: 237 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 296

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            KA  I   M   G    +VTYN+L+ G  K G   K+ +A  ++K +++ G +PN  T+
Sbjct: 297 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG---KIKEAMELWKQVLDLGFVPNSFTY 353

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           + LIDGFCK   ++ A  +F EM +HG+   +  YN+L+  LC +G L++A +L  EM  
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +  +P++++ N +I+G  K    +  + L   + E GL P  +T++TLI+   K G +++
Sbjct: 414 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 473

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A +    M+  G  PD   Y+ L+ GLS +G+   + N+++++   G        + ++ 
Sbjct: 474 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 533

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKE 466
            LC   +    + LL   F+   E
Sbjct: 534 CLCHSIQEVDVMELLPTFFQGTSE 557


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 217/388 (55%), Gaps = 6/388 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             F  F +    G     ++   L++ L  +G+ +     + ++       +  S+  ++
Sbjct: 138 FAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCK G+   A D+++ +    V P VV YN +ID  CK   + + +    +F +M+  
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD---LFSEMISK 254

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+ VT++ LI GFC    ++ A+ +F +M    I   V T+N L+N  C DGK+ E 
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             + D MM  G+KPN VT N+L++G+C  K V KA+ +F+ +++ G++P + +Y+ +I+ 
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CK  + ++A  +   M  + ++PDV TY+ LI GLS+ G +     +++++ + G+   
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TYN ++ ALCK  +  KA++LL    K++ +   PN+ TY++LIKG CQ GKLEDA  
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLT---KLKDKGIQPNMYTYSILIKGLCQSGKLEDARK 491

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +   LL KG   N  TY I+ +    +G
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEG 519



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 211/375 (56%), Gaps = 6/375 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+      + + +    ++ N+  +N +++ +CK   +N+A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M S G+SP VVTY+ LI G+C    +GK+  A  +F  M+   I P+  TFN L
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCI---LGKLNDAIDLFNKMILENIKPDVYTFNIL 301

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++ FCKD  +     VF+ M   GI    VTYNSL++G C+  ++++A ++ + M   G+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ + + +INGFCK K  ++A  LF ++  + + P V+TY++LID   K GR+  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRGV P + TYN ++  L +   V+    ++ +L + G++  + TY+IL+  LC
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC 481

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + GK + A  + + +          N+ TY ++I+GFC +G   +A  LL+++ + G IP
Sbjct: 482 QSGKLEDARKVFEGLLVKGHNL---NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538

Query: 506 NQTTYQIVREEMMEK 520
           +  TY+I+   + +K
Sbjct: 539 DAKTYEIIILSLFKK 553



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 204/361 (56%), Gaps = 6/361 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           ++ +V+  N ++ ++ K     +   ++ EM  + I  ++ +++ +++G C  GKLN A 
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+   M    + P V T+NIL++ +CK G   KM +   VF  M++ GI PN VT+N+L+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDG---KMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+C  + ++ A  +F  M   G+   + +Y+ +ING C   K DEA+ L  EM    + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+VVT ++LI+G  K   +  A  L D + ++G+ P++ TYN+++DA CK  +++ A A+
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              + D+G+ P++ TY+ LI GL + G +E  R +   L+  G    + TY I++   C 
Sbjct: 458 LTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCV 517

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G   +A++LL    KME     P+  TY ++I    +K + + A  LL E++ +G+ P 
Sbjct: 518 EGLFNEALALLS---KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPR 574

Query: 507 Q 507
           Q
Sbjct: 575 Q 575



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 3/264 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N +++++    F  + ++  A+ +F  +           +N ++  L         + L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G+KPN+V  N LIN FC+  L+  A  +F  I + G  P  IT+ TLI   C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+++ AF   + ++  G   D  +Y  LI GL + G      +++  +  N ++  +V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++ ++CK     +A  L  EM     +   P++VTY+ LI GFC  GKL DA  L N+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMI---SKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           ++ + + P+  T+ I+     + G
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDG 309



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 149/301 (49%), Gaps = 8/301 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L + +++    P + +F   ++ F K+GK     T+F  +      +  N +  + LM  
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM--MKQGIKPNFVTYNSLMDG 339

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y    + +     F      G+   + S + ++    K  KF++   ++KEM R+ I  +
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + +++ +++GL K+G+++ A  +++ M   GV P + TYN ++D  CK   I ++ KA A
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCK---IHQVDKAIA 456

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +   + + GI PN  T++ LI G C+   +  A KVFE +   G    V TY  +I G C
Sbjct: 457 LLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           V+G  +EA+AL  +M  +G  P+  T   +I    KK   + A  L  ++  +G+ P  I
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576

Query: 366 T 366
            
Sbjct: 577 A 577



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 62/261 (23%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           ++Y+S       +  +D+AV+L + ++     P     N ++    K K       L   
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+ P+++  N LI+ +C+ G +  AF++   +L  G +PD                
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDT--------------- 155

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----FKMEKEKKWP 470
                               +T+  L+  LC  G+ ++A    D++    F  ++     
Sbjct: 156 --------------------ITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQ----- 190

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------------- 515
             ++Y  LI G C+ G+   A  LL  +    + PN   Y  + +               
Sbjct: 191 --ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 516 -EMMEKGFIPDIEGHMYNISG 535
            EM+ KG  PD+  +   ISG
Sbjct: 249 SEMISKGISPDVVTYSALISG 269


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 258/536 (48%), Gaps = 45/536 (8%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
           + I  ++    W  L + D     L+L +      L L++  W  K+  L   H + L  
Sbjct: 21  KSIYNILTIDRWGSLNHMDYRQARLRLVHGK----LALKFLKWVVKQPGLETDHIVQLVC 76

Query: 68  RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
              H LV A+ Y   R  L  + + +GK    S +F AL T       N  + D+L+  Y
Sbjct: 77  ITTHILVRARMYDPARHILKELSLMSGK---SSFVFGALMTTYRLCNSNPSVYDILIRVY 133

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++        E F+  G YG   SV +CN +L ++VK G+   V    KEM +R+I  ++
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
            +FN ++N LC  G   K+S +M+ M+  G +P +VTYN ++  YCKKG           
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 236 ----GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               G+                  ++ K   + +DM +  I PNEVT+NTLI+GF  +  
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++  EM S G++   VT+N+LI+G   +G   EA+ +   M A GL P+ V+   
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK    + AR  +  +   G+    ITY  +ID  CK G +++A  + N M   G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD+ TY+ LI G  + G  +  + I+  +   G+    + Y+ L+   C+ G  K+A+
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            + + M     E    +  T+NVL+   C+ GK+ +A   +  +   G++PN  ++
Sbjct: 494 RIYEAMI---LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 201/396 (50%), Gaps = 6/396 (1%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +     E        G+ + V + N L+  L +  +      + ++M++R I  N
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             ++N ++NG    GK+  AS ++ +M S G+SP  VT+N LIDG+  +G   +  K   
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK--- 354

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  M   G+ P+EV++  L+DG CK+     A   +  M  +G+  G +TY  +I+GLC
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G LDEAV L +EM   G+ P++VT +ALINGFCK    + A+ +   I   GLSP+ I
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y+TLI   C+ G +++A  +  +M+  G   D  T+N L+  L + G V      M  +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            ++G+    V+++ L+      G+  KA S+ DEM K+      P   TY  L+KG C+ 
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKG 591

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G L +A   L  L       +   Y  +   M + G
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 23/399 (5%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++ N L+   + EG F++   ++  M+ + +  +  S+  +L+GLCK  + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A      MK  GV    +TY  +IDG CK G + +   A  +  +M ++GI P+ VT++ 
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE---AVVLLNEMSKDGIDPDIVTYSA 443

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFCK      A ++   +   G++   + Y++LI   C  G L EA+ + + M+  G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              +  T N L+   CK   V +A      ++  G+ P+ ++++ LI+ Y   G    AF
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++ + M   G  P   TY  L+ GL + G++      +  L         V YN L+ A+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-L 503
           CK G   KAVSL  EM    +    P+  TY  LI G C+KGK   A     E   +G +
Sbjct: 624 CKSGNLAKAVSLFGEMV---QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDI 526
           +PN+  Y                   RE+M   G  PDI
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 193/384 (50%), Gaps = 23/384 (5%)

Query: 160  ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
             + K G+++   Y  ++M       ++ + N +++G  + GK+ K +D++ +M +    P
Sbjct: 693  GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752

Query: 220  KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             + TYNIL+ GY K+  +   +    +++ ++ NGILP+++T ++L+ G C+   +   +
Sbjct: 753  NLTTYNILLHGYSKRKDVSTSF---LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 280  KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            K+ +     G+     T+N LI+  C +G+++ A  L   M + G+  +  T +A+++  
Sbjct: 810  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 340  CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
             +    +++R++  ++S+QG+SP    Y  LI+  C+ G ++ AF ++  M+   + P  
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 400  STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
               + ++  L++ G  +    ++  ++   +   + ++  L+   CK+G   +A+ L   
Sbjct: 930  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL--- 986

Query: 460  MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------- 511
               M       ++V+YNVLI G C KG +  A  L  E+   G + N TTY+        
Sbjct: 987  RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046

Query: 512  ---------IVREEMMEKGFIPDI 526
                     I+ ++++ +GFI  +
Sbjct: 1047 RETAFSGADIILKDLLARGFITSM 1070



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 11/417 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K GK          ++  SD +  N++  D L+  Y  + +    F  F      G   +
Sbjct: 520 KAGKVAEAEEFMRCMT--SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             +   LL+ L K G   + E   K +      ++   +N +L  +CK+G L KA  +  
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGG--IGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +M    + P   TY  LI G C+KG   I  ++  +A         +LPN+V +   +DG
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA----EARGNVLPNKVMYTCFVDG 693

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
             K     A +   E+M + G    +VT N++I+G    GK+++   L  EM      PN
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           + T N L++G+ K+K V  + +L+  I   G+ P  +T ++L+   C+   +E    +  
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           + + RGV  D  T+N LI+     G +    +++  + + G+     T + +V  L ++ 
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + +++  +L E   M K+   P    Y  LI G C+ G ++ A  +  E++   + P
Sbjct: 874 RFQESRMVLHE---MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N   ++ LI  + ++  I  ++++F  MG +G    V T N+++  +   G+     +  
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM+   + P+V T N LIN  C +   EK+  L   + + G +P+++TYNT++  YCK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           GR + A  + + M  +GV  DV TYN LI  L R   +     ++ ++    +    VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N L+     +GK   A  LL+EM         PN VT+N LI G   +G  ++A  +   
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLS---PNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 498 LLEKGLIPNQTTYQIV 513
           +  KGL P++ +Y ++
Sbjct: 359 MEAKGLTPSEVSYGVL 374



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 4/247 (1%)

Query: 119  IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
             +ML+     N + +  F+  K     G+     +C+ ++  L +  +F++   V  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 179  RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            ++ I      +  ++NGLC+ G +  A  + E+M +  + P  V  + ++    K    G
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK---CG 943

Query: 239  KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            K  +A  + + M++  ++P   +F TL+   CK+ N+  A+++   M + G+   +V+YN
Sbjct: 944  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 299  SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISE 357
             LI GLC  G +  A  L +EM   G   N  T  ALI G   ++     A ++  D+  
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063

Query: 358  QGLSPSV 364
            +G   S+
Sbjct: 1064 RGFITSM 1070



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 21/192 (10%)

Query: 155  NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            + ++RAL K GK ++   + + M + ++   + SF  +++  CK G + +A ++   M +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 215  LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             G+   +V+YN+LI G C K   G M  A  ++++M  +G L N  T+  LI G    E 
Sbjct: 993  CGLKLDLVSYNVLITGLCAK---GDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049

Query: 275  -ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL----------DEAVALRDEMMAS 323
              S A  + +++    +A G +T  SL      + K+          D AV  R+E+   
Sbjct: 1050 AFSGADIILKDL----LARGFITSMSLSQDSHRNLKMAMEKLKALQNDIAVCHREEL--- 1102

Query: 324  GLKPNVVTSNAL 335
             L+ NV++ N L
Sbjct: 1103 DLQSNVLSKNQL 1114


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 13/493 (2%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           S L N D   + L L + +      LR+F +  +       L     L   L  A+K+ +
Sbjct: 23  SLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAE 82

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLAYVKNMKPHLGFEA 138
           +++ L   V +G   S   +   +S+        SI+    DML   Y+ N       E 
Sbjct: 83  MKNVLKFIVNDGNLWS--NVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEV 140

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   G +    SC + L AL + G  E      ++M    IE+ + S+  V++GLCK
Sbjct: 141 FDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCK 200

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +A  +M+++   G  P V+TYN L++GY +   +G +   + +   M +N +  N
Sbjct: 201 KGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV---NEILSLMEKNVVDYN 257

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+  LI+ + +   I  A K+F+EM   GI   V  Y S+IN  C  G +  A  L D
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM    L PN  T  ALING CK   ++ A ++ +D+  +G+  + + +NTL+D YCK+G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++A  ++N M  +G   D  T N + +G  R    E  + ++  +   G+   +V+++
Sbjct: 378 MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 437

Query: 439 ILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           IL+   CK+    +A  L    FK MEK+ K P++VTYN  I+ +C+KGK+E+A  L+NE
Sbjct: 438 ILIDIYCKEQNFAEARRL----FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 498 LLEKGLIPNQTTY 510
           + E+GL+P+  TY
Sbjct: 494 MQERGLMPDTYTY 506



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 190/347 (54%), Gaps = 8/347 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V +   L+    +  K E+ E ++ EM ++ IE ++  +  ++N  CK G + +A  + 
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 316

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M    + P   TY  LI+G CK G   +M  A+ +  DM   G+  N V FNTL+DG+
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAG---EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   I  A+++   M   G      T N + +G C   + +EA  L   M   G+ PNV
Sbjct: 374 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ + LI+ +CK++   +AR LF  + ++G +PSV+TYN  I+ YCK+G+ME+A+ + N 
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +RG++PD  TY  LI G    GNV+    + NE+   G+   +VTY +++  L KDG+
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           + +A  L DE   M KE   P+   Y+ LI    + G L   +GL N
Sbjct: 554 ADEAFKLYDE---MNKEGIVPDDGIYSSLIASLHKVGPL--VSGLEN 595



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K SV++ N LL   ++      V  +   M++  ++ N+ ++  ++    ++ K+ +A
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M   G+ P V  Y  +I+  CK    G M +A  +F +M E  ++PN  T+  L
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCK---FGNMKRAFVLFDEMTERRLVPNAYTYGAL 334

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK   + AA  +  +M S G+    V +N+L++G C  G +DEA+ L++ M   G 
Sbjct: 335 INGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 394

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + +  T N + +GFC+    E+A+ L   + E+G++P+V++++ LID YCKE    +A  
Sbjct: 395 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 454

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G  P V TYN  I    ++G +E    ++NE+   G+     TY  L+    
Sbjct: 455 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 514

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G   +A+ L +EM ++   +   N+VTY V+I G  + G+ ++A  L +E+ ++G++P
Sbjct: 515 ASGNVDRALELFNEMPQLGLNR---NVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 571

Query: 506 NQTTY 510
           +   Y
Sbjct: 572 DDGIY 576



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 3/165 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V+S + L+    KE  F +   ++K M+++    ++ ++N  +   CK GK+ +A
Sbjct: 428 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M+  G+ P   TY  LIDG    G +    +A  +F +M + G+  N VT+  +
Sbjct: 488 YKLINEMQERGLMPDTYTYTSLIDGERASGNVD---RALELFNEMPQLGLNRNVVTYTVI 544

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           I G  KD     A K+++EM   GI      Y+SLI  L   G L
Sbjct: 545 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 13/154 (8%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI+ID+    Y K          FK     G   SV++ N  +    K+GK E+   +  
Sbjct: 437 SILIDI----YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 492

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM+ R +  +  ++  +++G   +G +++A ++  +M  LG++  VVTY ++I G  K G
Sbjct: 493 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 552

Query: 236 GIGKMYKADAVFK---DMVENGILPNEVTFNTLI 266
                 +AD  FK   +M + GI+P++  +++LI
Sbjct: 553 ------RADEAFKLYDEMNKEGIVPDDGIYSSLI 580


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 13/493 (2%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           S L N D   + L L + +      LR+F +  +       L     L   L  A+K+ +
Sbjct: 27  SLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAE 86

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLAYVKNMKPHLGFEA 138
           +++ L   V +G   S   +   +S+        SI+    DML   Y+ N       E 
Sbjct: 87  MKNVLKFIVNDGNLWS--NVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEV 144

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   G +    SC + L AL + G  E      ++M    IE+ + S+  V++GLCK
Sbjct: 145 FDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCK 204

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +A  +M+++   G  P V+TYN L++GY +   +G +   + +   M +N +  N
Sbjct: 205 KGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV---NEILSLMEKNVVDYN 261

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+  LI+ + +   I  A K+F+EM   GI   V  Y S+IN  C  G +  A  L D
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM    L PN  T  ALING CK   ++ A ++ +D+  +G+  + + +NTL+D YCK+G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++A  ++N M  +G   D  T N + +G  R    E  + ++  +   G+   +V+++
Sbjct: 382 MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 441

Query: 439 ILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           IL+   CK+    +A  L    FK MEK+ K P++VTYN  I+ +C+KGK+E+A  L+NE
Sbjct: 442 ILIDIYCKEQNFAEARRL----FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 498 LLEKGLIPNQTTY 510
           + E+GL+P+  TY
Sbjct: 498 MQERGLMPDTYTY 510



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 190/347 (54%), Gaps = 8/347 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V +   L+    +  K E+ E ++ EM ++ IE ++  +  ++N  CK G + +A  + 
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 320

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M    + P   TY  LI+G CK G   +M  A+ +  DM   G+  N V FNTL+DG+
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAG---EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   I  A+++   M   G      T N + +G C   + +EA  L   M   G+ PNV
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ + LI+ +CK++   +AR LF  + ++G +PSV+TYN  I+ YCK+G+ME+A+ + N 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +RG++PD  TY  LI G    GNV+    + NE+   G+   +VTY +++  L KDG+
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           + +A  L DE   M KE   P+   Y+ LI    + G L   +GL N
Sbjct: 558 ADEAFKLYDE---MNKEGIVPDDGIYSSLIASLHKVGPL--VSGLEN 599



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K SV++ N LL   ++      V  +   M++  ++ N+ ++  ++    ++ K+ +A
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M   G+ P V  Y  +I+  CK    G M +A  +F +M E  ++PN  T+  L
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCK---FGNMKRAFVLFDEMTERRLVPNAYTYGAL 338

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK   + AA  +  +M S G+    V +N+L++G C  G +DEA+ L++ M   G 
Sbjct: 339 INGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 398

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + +  T N + +GFC+    E+A+ L   + E+G++P+V++++ LID YCKE    +A  
Sbjct: 399 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 458

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G  P V TYN  I    ++G +E    ++NE+   G+     TY  L+    
Sbjct: 459 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 518

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G   +A+ L +EM ++   +   N+VTY V+I G  + G+ ++A  L +E+ ++G++P
Sbjct: 519 ASGNVDRALELFNEMPQLGLNR---NVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 575

Query: 506 NQTTY 510
           +   Y
Sbjct: 576 DDGIY 580



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 3/165 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V+S + L+    KE  F +   ++K M+++    ++ ++N  +   CK GK+ +A
Sbjct: 432 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 491

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M+  G+ P   TY  LIDG    G +    +A  +F +M + G+  N VT+  +
Sbjct: 492 YKLINEMQERGLMPDTYTYTSLIDGERASGNVD---RALELFNEMPQLGLNRNVVTYTVI 548

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           I G  KD     A K+++EM   GI      Y+SLI  L   G L
Sbjct: 549 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 13/154 (8%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI+ID+    Y K          FK     G   SV++ N  +    K+GK E+   +  
Sbjct: 441 SILIDI----YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 496

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM+ R +  +  ++  +++G   +G +++A ++  +M  LG++  VVTY ++I G  K G
Sbjct: 497 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 556

Query: 236 GIGKMYKADAVFK---DMVENGILPNEVTFNTLI 266
                 +AD  FK   +M + GI+P++  +++LI
Sbjct: 557 ------RADEAFKLYDEMNKEGIVPDDGIYSSLI 584


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 207/367 (56%), Gaps = 7/367 (1%)

Query: 155 NQLLRALVKEGKFEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+FE+  + +Y  M     E +  +FN +++GL K G L  A +++ +M 
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           +    P V+TY ILI+G+CK+G   ++ +A  +   M   G+  N V +N LI   CKD 
Sbjct: 405 AKRFEPNVITYTILINGFCKQG---RLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           NI  A+++F EM   G    + T+NSLINGLC + K++EA++L  +M   G+  N VT N
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L++ F  +  +++A  L D++  +G     ITYN LI A CK G +E    +   ML +
Sbjct: 522 TLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK 581

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P + + N LI+GL R G V      + ++++ G+   +VTYN L+  LCK G  ++A
Sbjct: 582 GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            +L +   K++ E   P+ +TYN LI   C +G   DA  LL + ++ G IPN+ T+ I+
Sbjct: 642 SNLFN---KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSIL 698

Query: 514 REEMMEK 520
              +++K
Sbjct: 699 INYIVKK 705



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 201/381 (52%), Gaps = 11/381 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  +  L+   L+  L + G+ ++   +  ++      L    +N +++G   +G+  +A
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVL----YNTLISGYVASGRFEEA 360

Query: 206 SDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            D++  +M   G  P   T+NI+IDG  KKG    +  A  +  +MV     PN +T+  
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG---YLVSALELLNEMVAKRFEPNVITYTI 417

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFCK   +  A ++   M + G++   V YN LI  LC DG ++EA+ L  EM   G
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            KP++ T N+LING CK   +E+A  L+ D+  +G+  + +TYNTL+ A+     ++ AF
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + ML RG   D  TYN LI  L + G VE    +  E++  G+   +++ NIL+  L
Sbjct: 538 KLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ GK   A+  L +M         P+IVTYN LI G C+ G +++A+ L N+L  +G+ 
Sbjct: 598 CRTGKVNDALKFLQDMIH---RGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIR 654

Query: 505 PNQTTYQIVREEMMEKGFIPD 525
           P+  TY  +      +G   D
Sbjct: 655 PDAITYNTLISRHCHEGMFND 675



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 201/379 (53%), Gaps = 21/379 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY--------GLKSSVLSCNQLLRALVKEGK 166
           N+++ + L+  YV + +       F+ A D         G +    + N ++  LVK+G 
Sbjct: 340 NTVLYNTLISGYVASGR-------FEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                 +  EM  +R E N+ ++  ++NG CK G+L +A++I+  M + G+S   V YN 
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNC 452

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI   CK G I    +A  +F +M   G  P+  TFN+LI+G CK+  +  A+ ++ +M 
Sbjct: 453 LICALCKDGNIE---EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+ A  VTYN+L++   +   + +A  L DEM+  G   + +T N LI   CK   VE
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           K   LF+++  +G+ P++I+ N LI   C+ G++ DA      M+ RG+ PD+ TYN LI
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL + G+V+   N+ N+L + G+R   +TYN L+   C +G    A  LL   +K    
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLL---YKGVDS 686

Query: 467 KKWPNIVTYNVLIKGFCQK 485
              PN VT+++LI    +K
Sbjct: 687 GFIPNEVTWSILINYIVKK 705



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 192/381 (50%), Gaps = 21/381 (5%)

Query: 137 EAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           E F+RAG   G   +  +C  L+  L   G F+ +E + K+MK   +      F  ++  
Sbjct: 84  ELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKH 143

Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDM 250
             KAG   +A+ ++ DM  +    P   +YN    IL+DG C +        A  VF DM
Sbjct: 144 YGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPR-------VAPNVFYDM 196

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +  G+ P   TF  ++   C    + +A  +  +M  HG     V Y +LI+ LC + ++
Sbjct: 197 LSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRV 256

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+ L ++M     +P+V T N +I+G C+   + +A  L D +  +G S   +TY  L
Sbjct: 257 SEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYL 316

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM-NELVNNG 429
           +   C+ G++++A A+ N + +    P+   YN LI+G    G  E  ++++ N +V  G
Sbjct: 317 MHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAG 372

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                 T+NI++  L K G    A+ LL+EM     E   PN++TY +LI GFC++G+LE
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE---PNVITYTILINGFCKQGRLE 429

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  ++N +  KGL  N   Y
Sbjct: 430 EAAEIVNSMSAKGLSLNTVGY 450



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 157/313 (50%), Gaps = 8/313 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
            LL+ +V  +  P + ++   ++ F K G+    + I +++S  +  L  N++  + L+ 
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS--AKGLSLNTVGYNCLIC 455

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K+       + F      G K  + + N L+  L K  K E+   +Y +M    +  
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++N +++       + +A  ++++M   G     +TYN LI   CK G +    K  
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE---KGL 572

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F++M+  GI P  ++ N LI G C+   ++ A+K  ++M   G+   +VTYNSLINGL
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G + EA  L +++ + G++P+ +T N LI+  C + +   A +L     + G  P+ 
Sbjct: 633 CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNE 692

Query: 365 ITYNTLIDAYCKE 377
           +T++ LI+   K+
Sbjct: 693 VTWSILINYIVKK 705



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 35/165 (21%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++I  + L+ A  K      G   F+     G+  +++SCN L+  L + GK  D     
Sbjct: 551 DNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFL 610

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY---------- 224
           ++M  R +  ++ ++N ++NGLCK G + +AS++   ++S G+ P  +TY          
Sbjct: 611 QDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHE 670

Query: 225 -------------------------NILIDGYCKKGGIGKMYKAD 244
                                    +ILI+   KK   G  +  D
Sbjct: 671 GMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARFSKD 715


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 192/340 (56%), Gaps = 6/340 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            FN ++  + ++GKL  A ++ ++M   GV P VVT+N L+ G CK   +     A+A+ 
Sbjct: 244 QFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNN---ANALR 300

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M + GI P+  T+   I G CK   I  AM++FEEM   G+    V   +LI+  C +
Sbjct: 301 GLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKE 360

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +   + LR EM   G+K ++V  NAL+NGFC+ + ++ A  + +++ + GL P  +TY
Sbjct: 361 GDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTY 420

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TLID  CKEG ++ A  M+  M D GV  D  TY  LI+GLS+ G       I+ E++ 
Sbjct: 421 TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMME 480

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++    TY +++ A CK+G  K     L E   M+ + K P IVTYNV++ GFC  G+
Sbjct: 481 AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKE---MQNKGKNPGIVTYNVVMNGFCSLGQ 537

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++A+ LLN +L  G+ PN  TY I+ +   + G + D E
Sbjct: 538 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 577



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 207/377 (54%), Gaps = 9/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+       N L+R +++ GK      V+ EM RR ++  + +FN +++G+CKA  LN
Sbjct: 235 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 294

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ +   M   G++P V TY   I G CK    G++  A  +F++M E G+ PN V   
Sbjct: 295 NANALRGLMAKAGIAPDVYTYGAFIQGLCK---TGRIQDAMEMFEEMCERGLNPNTVVLT 351

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLID  CK+ +++A +++  EM + G+ A +V YN+L+NG C    +  A  + +EM   
Sbjct: 352 TLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD 411

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKP+ VT   LI+G CK+  ++ A  +  ++S++G++   +TY  LI    K GR  DA
Sbjct: 412 GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA 471

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++ G+ PD +TY  +I    + G+V+     + E+ N G   G+VTYN+++  
Sbjct: 472 ERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 531

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C  G+ K A  LL+ M  +      PN +TYN+L+ G C+ GK+ D   L +    KG+
Sbjct: 532 FCSLGQMKNADMLLNAMLNI---GVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGM 585

Query: 504 IPNQTTYQIVREEMMEK 520
           + +   Y  +  E ++K
Sbjct: 586 VSDFGVYTSLINEFVKK 602



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 156/280 (55%), Gaps = 3/280 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A A +  +++ G+ P    FN L+    +   +++A  VF+EM   G+   VVT+N+L+
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G+C    L+ A ALR  M  +G+ P+V T  A I G CK   ++ A  +F+++ E+GL+
Sbjct: 285 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +   TLIDA+CKEG +     +R  M  RGV  D+  YN L+ G  R  +++   +I
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDI 404

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+  +G++   VTY  L+   CK+G+   A+ +  E   M  E    + VTY  LI G
Sbjct: 405 VEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE---MSDEGVALDDVTYTALISG 461

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + G+  DA  +L E++E GL P+ TTY +V +   + G
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNG 501



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 53/378 (14%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLM 123
           LH L+ A   P+ R F   +   +++GK  S   +F  +         +  N+++  M  
Sbjct: 231 LH-LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 289

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            + + N     G  A       G+   V +    ++ L K G+ +D   +++EM  R + 
Sbjct: 290 ASDLNNANALRGLMA-----KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N      +++  CK G +    ++  +M + GV   +V YN L++G+C+   +  M  A
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR---VRDMKAA 401

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + ++M ++G+ P++VT+ TLIDG CK+  +  AM++ +EM   G+A   VTY +LI+G
Sbjct: 402 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 461

Query: 304 LCVDGKLDEAVALRDEMMASGLKPN----------------------------------- 328
           L   G+  +A  +  EMM +GL+P+                                   
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 521

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N ++NGFC    ++ A +L + +   G+ P+ ITYN L+D +CK G++ D   +++
Sbjct: 522 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 581

Query: 389 SMLDRGVLPDVSTYNCLI 406
           +   +G++ D   Y  LI
Sbjct: 582 A---KGMVSDFGVYTSLI 596



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 8/294 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+    K G+      +F  +  C   L  N++++  L+ A+ K      G E      
Sbjct: 317 AFIQGLCKTGRIQDAMEMFEEM--CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMA 374

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+K+ +++ N L+    +    +    + +EM++  ++ +  ++  +++G CK G+L+
Sbjct: 375 TRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELD 434

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ ++M   GV+   VTY  LI G  K    G+   A+ +  +M+E G+ P+  T+ 
Sbjct: 435 TAMEMKQEMSDEGVALDDVTYTALISGLSKA---GRSVDAERILCEMMEAGLQPDNTTYT 491

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FCK+ ++    K  +EM + G   G+VTYN ++NG C  G++  A  L + M+  
Sbjct: 492 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 551

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           G+ PN +T N L++G CK   V     L    S +G+      Y +LI+ + K+
Sbjct: 552 GVCPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEFVKK 602



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 48/241 (19%)

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V +A   +  + + G+ P    +N L+    + G++  A  + + ML RGV P V T+N 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM---- 460
           L++G+ +  ++     +   +   G+   + TY   +  LCK G+ + A+ + +EM    
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 461 ----------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
                                       ++M       ++V YN L+ GFC+   ++ AN
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402

Query: 493 GLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISGT 536
            ++ E+ + GL P++ TY  +                ++EM ++G   D   +   ISG 
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462

Query: 537 S 537
           S
Sbjct: 463 S 463


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 207/377 (54%), Gaps = 9/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL       N L+R LV+ G+    + V+ EM+ R +   + SFN +++G+C+AG L+
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M   GV+P V TY  LI G C+   +G++  A  VF+ M   G+ PN V F 
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCR---VGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  CK  +    +++  EM   G+    VTYN+++NGLC    L  A  +  EM ++
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P+ VT   LI+G+CK++ ++ A  +  ++  +G+    +TY  LI    K GR  DA
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++ G+ PD +TY  +I    R+G+V+    ++ E+ N G + G+VTYN+++  
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G+ K A  LL+ M  +      P+ +TYN+L+ G C+ GK+ D   L +    KG 
Sbjct: 406 FCKLGQMKNADMLLNAMINI---GVSPDDITYNILLDGHCKHGKVTDIEELKS---AKGT 459

Query: 504 IPNQTTYQIVREEMMEK 520
           +P+   Y  +  E+++K
Sbjct: 460 VPDLGVYTSIVGEIVKK 476



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 191/339 (56%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++  L + G+L  A ++ ++M+S GV   VV++N +I G C+ G    +  A+ + +
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG---DLDGAETLHR 175

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M E G+ P+  T+  LI G C+   I  A  VFE+M   G+    V +  LI+  C  G
Sbjct: 176 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 235

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +  + L  EM   G++P+ VT NA++NG C+ + ++ A  +  ++   GL P  +TY 
Sbjct: 236 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 295

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YCKE  ++ A  ++ +M+  GV  D  TY  LI+GLS+ G       ++ E++  
Sbjct: 296 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 355

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+     TY +++ A C+ G  K  + LL EM   + + + P +VTYNV++ GFC+ G++
Sbjct: 356 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM---QNKGRKPGVVTYNVIMNGFCKLGQM 412

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++A+ LLN ++  G+ P+  TY I+ +   + G + DIE
Sbjct: 413 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE 451



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 3/280 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A A +  +++ G+ P    FN L+    +   +++A  VF+EM S G+   VV++N++I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G+C  G LD A  L   M  +G+ P+V T  ALI G C+   +E AR +F+ +  +G+ 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ + +  LIDA+CK+G  E    +   M +RGV PD  TYN ++ GL R  +++    I
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+ + G+R   VTY  L+   CK+ +   A+ +   M     E    + VTY  LI G
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV---AEGVGLDEVTYTALISG 335

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + G+  DA  +L E++E GL P+ TTY +V +    KG
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 170/312 (54%), Gaps = 6/312 (1%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           +R  + G+   V +   L++ L + G+ ED   V+++M  R ++ N   F  +++  CK 
Sbjct: 175 RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKK 234

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G      ++  +M+  GV P  VTYN +++G C+      +  A  +  +M   G+ P+ 
Sbjct: 235 GDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA---RDLKSASGIVVEMRSAGLRPDT 291

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+ TLIDG+CK+E +  AM++ + M + G+    VTY +LI+GL   G+  +A  +  E
Sbjct: 292 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 351

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           MM +GL+P+  T   +I+ FC+K  V+    L  ++  +G  P V+TYN +++ +CK G+
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 411

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M++A  + N+M++ GV PD  TYN L+ G  + G V  +  + +     G    L  Y  
Sbjct: 412 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTS 468

Query: 440 LVGALCKDGKSK 451
           +VG + K   +K
Sbjct: 469 IVGEIVKKKTTK 480



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 150/269 (55%), Gaps = 6/269 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++    G+K + +    L+ A  K+G  E +  +++EM+ R +  +  ++N ++NGLC+
Sbjct: 209 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 268

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A  L  AS I+ +M+S G+ P  VTY  LIDGYCK+    ++  A  + ++MV  G+  +
Sbjct: 269 ARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE---EELDMAMEIKQNMVAEGVGLD 325

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           EVT+  LI G  K    + A +V  EM   G+     TY  +I+  C  G +   + L  
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   G KP VVT N ++NGFCK   ++ A +L + +   G+SP  ITYN L+D +CK G
Sbjct: 386 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 445

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           ++ D   ++++   +G +PD+  Y  ++ 
Sbjct: 446 KVTDIEELKSA---KGTVPDLGVYTSIVG 471



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 143/294 (48%), Gaps = 8/294 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +    + G+      +F  +  C   +  N+++  +L+ A+ K        E  +   
Sbjct: 191 ALIQGLCRVGRIEDARGVFEKM--CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 248

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++   ++ N ++  L +    +    +  EM+   +  +  ++  +++G CK  +L+
Sbjct: 249 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 308

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I ++M + GV    VTY  LI G  K    G+   A+ V  +M+E G+ P+  T+ 
Sbjct: 309 MAMEIKQNMVAEGVGLDEVTYTALISGLSKA---GRSADAERVLGEMMEAGLEPDNTTYT 365

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FC+  ++   +++ +EM + G   GVVTYN ++NG C  G++  A  L + M+  
Sbjct: 366 MVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINI 425

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           G+ P+ +T N L++G CK   V     L    S +G  P +  Y +++    K+
Sbjct: 426 GVSPDDITYNILLDGHCKHGKVTDIEELK---SAKGTVPDLGVYTSIVGEIVKK 476



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 51/200 (25%)

Query: 374 YCKEGRMEDA-----FAMRN---------------------------SMLDRGVLPDVST 401
           Y +EG + DA      A+R                             +LD G+ P+   
Sbjct: 59  YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKL 118

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N L+  L R G +   +N+ +E+ + G+R  +V++N ++  +C+ G    A +L     
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL---HR 175

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
           +M +    P++ TY  LI+G C+ G++EDA G+  ++  +G+ PN   + I         
Sbjct: 176 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 235

Query: 513 -------VREEMMEKGFIPD 525
                  +  EM E+G  PD
Sbjct: 236 DAETMLELHREMRERGVRPD 255


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 233/434 (53%), Gaps = 22/434 (5%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I+D+L+  Y K          F +     L   V +CN++LR L  +        VY+ M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               I+  + ++N +L+  CK GK+ +  D++ +M+  G +P  VTYN+LI+G  KK   
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK--- 282

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G+  +A  +  +M++ G+  +  T+N LI G+     ++ A+ + EEM   G +  V TY
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           NS I GLC  G++ +A+    +M+A+ L P+VV+ N LI G+C+   + KA +LFD++  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
             L P+++TYNTL+D  C++G +E A  ++  M++ G+ PD+ TY  L+ G  + G++  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            +   +E+++ G+      Y   +    K G + +A SL +EM     +   P+++ YNV
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML---AKGFPPDLIIYNV 519

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------RE---EMMEKG 521
           ++ G C+ G LE+A+ LL +++  G+IP+  TY  +             RE   EM+ KG
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579

Query: 522 FIPDIEGHMYNISG 535
             P +  +   I G
Sbjct: 580 LTPSVVTYTVLIHG 593



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 228/425 (53%), Gaps = 22/425 (5%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+ +Y K  K   G +        G   + ++ N L+  L K+G+FE  + +  E
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M +  ++++  ++N ++ G    G L +A  + E+M   G SP V TYN  I G CK   
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK--- 351

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G+M  A     DM+ N +LP+ V++NTLI G+C+  N+  A  +F+E+ S  +   +VT
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L++GLC  G+L+ A  L+ EM+  G+ P++VT   L+NG CK   +  A+  FD++ 
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL      Y T I    K G    AF+++  ML +G  PD+  YN ++ GL + GN+E
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ ++V++G+    VTY  ++ A  ++G+ +K   +  EM     +   P++VTY 
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML---SKGLTPSVVTYT 588

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------VRE---------EMMEK 520
           VLI G   KG+LE A    +E+ EKG++PN  TY         VR          EM+EK
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 521 GFIPD 525
           G  P+
Sbjct: 649 GIFPN 653



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 187/348 (53%), Gaps = 6/348 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V+S N L+    + G       ++ E++   +   + ++N +L+GLC+ G+L  A 
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +  +M + G++P +VTY IL++G CK   +G +  A   F +M+  G+  +   + T I
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCK---MGSLSMAQEFFDEMLHEGLELDSYAYATRI 486

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  K  + S A  + EEM + G    ++ YN +++GLC  G L+EA  L  +M++ G+ 
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT  ++I+   +   + K R +F ++  +GL+PSV+TY  LI  +  +GR+E AF  
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M ++G+LP+V TYN LI GL +   ++   N   E+V  G+     +Y IL+   C 
Sbjct: 607 FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCN 666

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            G  ++A+SL  +M     +   P+  T++ L+K   +  KL+    L
Sbjct: 667 MGNWQEALSLYKQMLDRGVQ---PDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 165/297 (55%), Gaps = 8/297 (2%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           VS K++  ++LI  Y KK  + +     +VF  M+++ + P+    N ++      + +S
Sbjct: 162 VSVKIL--DLLIWVYSKKSMVEQCL---SVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V+  MG  GI   +VTYN+L++  C  GK+ + + L  EM   G  PN VT N LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG  KK   E+A+ L  ++ + GL  S  TYN LI  Y  +G + +A +++  M+ +G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V+TYN  I GL + G +      +++++ N +   +V+YN L+   C+ G   KA  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            DE+  +     +P IVTYN L+ G C++G+LE A  L  E++ +G+ P+  TY I+
Sbjct: 397 FDELRSI---YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 48/377 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN----SIIIDMLMLAYVKNMKPHLGFEAF 139
           SF++   K G+ +       A+   SD L  N     +  + L+  Y +       F  F
Sbjct: 344 SFIYGLCKLGRMSD------AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
                  L  ++++ N LL  L ++G+ E  + +  EM    I  ++ ++  ++NG CK 
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457

Query: 200 GKLNKASD-----------------------------------IMEDMKSLGVSPKVVTY 224
           G L+ A +                                   + E+M + G  P ++ Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N+++DG CK   +G + +A  + + MV +G++P+ VT+ ++I    ++  +    ++F E
Sbjct: 518 NVVVDGLCK---LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S G+   VVTY  LI+G    G+L+ A     EM   G+ PNV+T N+LING CK + 
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A   F ++ E+G+ P+  +Y  LI+  C  G  ++A ++   MLDRGV PD  T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 405 LIAGLSREGNVEGVRNI 421
           L+  L ++  ++ VR +
Sbjct: 695 LLKQLGKDCKLQAVRQL 711


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 222/424 (52%), Gaps = 33/424 (7%)

Query: 122 LMLAYVKNMKPH-LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+L     ++PH      + R     L  S  S + LL AL     F     ++ +M R 
Sbjct: 93  LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFA----LFADMFRL 148

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R+ L   +FN +L  LC AGK  +A +++  M      P  VTYN +I G+C +G   ++
Sbjct: 149 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRG---RV 201

Query: 241 YKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYN 298
             A  + ++M E G I PN+ T+ T+I G+CK   +  A+KVF+EM + G +    V YN
Sbjct: 202 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 261

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C  GKLD A+  RD M+  G+   V T N L++         +A  L +++  +
Sbjct: 262 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+  V TYN LI+ +CKEG ++ A  +  +M  RGV   V TY  LI  LS++G V+  
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + +E V  G+R  LV YN L+ +    G   +A  ++ EM   EK++  P+ VTYN L
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM---EKKRIAPDDVTYNTL 438

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           ++G C  G++++A  L++E+ ++G+ P+  TY                  +R EMM KGF
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 523 IPDI 526
            P +
Sbjct: 499 NPTL 502



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 207/403 (51%), Gaps = 45/403 (11%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSF 189
           KP    E  ++      + + ++ N ++      G+ +    + +EM+ R  I  N  ++
Sbjct: 169 KPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 224

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGI----------- 237
             V++G CK G++++A  + ++M + G V P+ V YN LI GYC +G +           
Sbjct: 225 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 284

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G+  +A  + ++M   G+  +  T+N LI+G CK+ N+ 
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVK 344

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+++FE M   G+ A VVTY SLI  L   G++ E   L DE +  G++P++V  NALI
Sbjct: 345 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N       +++A  +  ++ ++ ++P  +TYNTL+   C  GR+++A  + + M  RG+ 
Sbjct: 405 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TYN LI+G S +G+V+    I NE++N G    L+TYN L+  LCK+G+   A ++
Sbjct: 465 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 524

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           + EM    +    P+  TY  LI+G       ED   + +E L
Sbjct: 525 VKEMV---ENGITPDDSTYISLIEGLTT----EDERAIDDERL 560



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG-----FEA 138
           S ++   K G+      +F       D   R  I  D+++   + N     G     FE 
Sbjct: 367 SLIYALSKKGQVQETDKLF-------DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 419

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
                   +    ++ N L+R L   G+ ++   +  EM +R I+ +L ++N +++G   
Sbjct: 420 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 479

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G +  A  I  +M + G +P ++TYN LI G CK G   +   A+ + K+MVENGI P+
Sbjct: 480 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG---QGDDAENMVKEMVENGITPD 536

Query: 259 EVTFNTLIDGFCK-------DENISAA 278
           + T+ +LI+G          DE ++AA
Sbjct: 537 DSTYISLIEGLTTEDERAIDDERLAAA 563


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 192/340 (56%), Gaps = 6/340 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            FN ++  + ++GKL  A ++ ++M   GV P VVT+N L+ G CK   +     A+A+ 
Sbjct: 116 QFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNN---ANALR 172

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M + GI P+  T+   I G CK   I  AM++FEEM   G+    V   +LI+  C +
Sbjct: 173 GLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKE 232

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +   + LR EM   G+K ++V  NAL+NGFC+ + ++ A  + +++ + GL P  +TY
Sbjct: 233 GDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTY 292

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TLID  CKEG ++ A  M+  M D GV  D  TY  LI+GLS+ G       I+ E++ 
Sbjct: 293 TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMME 352

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++    TY +++ A CK+G  K     L E   M+ + K P IVTYNV++ GFC  G+
Sbjct: 353 AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKE---MQNKGKNPGIVTYNVVMNGFCSLGQ 409

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++A+ LLN +L  G+ PN  TY I+ +   + G + D E
Sbjct: 410 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 449



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 207/377 (54%), Gaps = 9/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+       N L+R +++ GK      V+ EM RR ++  + +FN +++G+CKA  LN
Sbjct: 107 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 166

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ +   M   G++P V TY   I G CK    G++  A  +F++M E G+ PN V   
Sbjct: 167 NANALRGLMAKAGIAPDVYTYGAFIQGLCK---TGRIQDAMEMFEEMCERGLNPNTVVLT 223

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLID  CK+ +++A +++  EM + G+ A +V YN+L+NG C    +  A  + +EM   
Sbjct: 224 TLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD 283

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKP+ VT   LI+G CK+  ++ A  +  ++S++G++   +TY  LI    K GR  DA
Sbjct: 284 GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA 343

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++ G+ PD +TY  +I    + G+V+     + E+ N G   G+VTYN+++  
Sbjct: 344 ERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 403

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C  G+ K A  LL+ M  +      PN +TYN+L+ G C+ GK+ D   L +    KG+
Sbjct: 404 FCSLGQMKNADMLLNAMLNI---GVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGM 457

Query: 504 IPNQTTYQIVREEMMEK 520
           + +   Y  +  E ++K
Sbjct: 458 VSDFGVYTSLINEFVKK 474



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 156/280 (55%), Gaps = 3/280 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A A +  +++ G+ P    FN L+    +   +++A  VF+EM   G+   VVT+N+L+
Sbjct: 97  EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 156

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G+C    L+ A ALR  M  +G+ P+V T  A I G CK   ++ A  +F+++ E+GL+
Sbjct: 157 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +   TLIDA+CKEG +     +R  M  RGV  D+  YN L+ G  R  +++   +I
Sbjct: 217 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDI 276

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+  +G++   VTY  L+   CK+G+   A+ +  E   M  E    + VTY  LI G
Sbjct: 277 VEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE---MSDEGVALDDVTYTALISG 333

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + G+  DA  +L E++E GL P+ TTY +V +   + G
Sbjct: 334 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNG 373



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 53/378 (14%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLM 123
           LH L+ A   P+ R F   +   +++GK  S   +F  +         +  N+++  M  
Sbjct: 103 LH-LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 161

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            + + N     G  A       G+   V +    ++ L K G+ +D   +++EM  R + 
Sbjct: 162 ASDLNNANALRGLMA-----KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N      +++  CK G +    ++  +M + GV   +V YN L++G+C+   +  M  A
Sbjct: 217 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR---VRDMKAA 273

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + ++M ++G+ P++VT+ TLIDG CK+  +  AM++ +EM   G+A   VTY +LI+G
Sbjct: 274 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 333

Query: 304 LCVDGKLDEAVALRDEMMASGLKPN----------------------------------- 328
           L   G+  +A  +  EMM +GL+P+                                   
Sbjct: 334 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 393

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N ++NGFC    ++ A +L + +   G+ P+ ITYN L+D +CK G++ D   +++
Sbjct: 394 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 453

Query: 389 SMLDRGVLPDVSTYNCLI 406
           +   +G++ D   Y  LI
Sbjct: 454 A---KGMVSDFGVYTSLI 468



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 8/294 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+    K G+      +F  +  C   L  N++++  L+ A+ K      G E      
Sbjct: 189 AFIQGLCKTGRIQDAMEMFEEM--CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMA 246

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+K+ +++ N L+    +    +    + +EM++  ++ +  ++  +++G CK G+L+
Sbjct: 247 TRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELD 306

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ ++M   GV+   VTY  LI G  K    G+   A+ +  +M+E G+ P+  T+ 
Sbjct: 307 TAMEMKQEMSDEGVALDDVTYTALISGLSKA---GRSVDAERILCEMMEAGLQPDNTTYT 363

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FCK+ ++    K  +EM + G   G+VTYN ++NG C  G++  A  L + M+  
Sbjct: 364 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 423

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           G+ PN +T N L++G CK   V     L    S +G+      Y +LI+ + K+
Sbjct: 424 GVCPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEFVKK 474



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 48/241 (19%)

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V +A   +  + + G+ P    +N L+    + G++  A  + + ML RGV P V T+N 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM---- 460
           L++G+ +  ++     +   +   G+   + TY   +  LCK G+ + A+ + +EM    
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 461 ----------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
                                       ++M       ++V YN L+ GFC+   ++ AN
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274

Query: 493 GLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISGT 536
            ++ E+ + GL P++ TY  +                ++EM ++G   D   +   ISG 
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334

Query: 537 S 537
           S
Sbjct: 335 S 335


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 216/381 (56%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G + +V++ N ++  + K G       + ++M  R ++ ++ +++ +++ LC+ G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A  + ++M++ G+   +VTYN L+ G CK G   K      + KDM    I+PN +
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAG---KWNDGVQLLKDMTSRKIIPNVI 276

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN LID F K+  +  A ++++EM + GI+   +TYNSL++G C+  +L EA  + D M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           + +   P++VT  +LI G+CK K V++   LF  IS++GL  + +TY+ L+  +C+ G++
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E A  +   M+  GVLPDV TY  L+ GL   G +E    I  +L  + M   +V Y I+
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTII 456

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A +L      +  +   PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 457 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  +    +  G
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDG 534



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 220/399 (55%), Gaps = 6/399 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + ++    K+    L  +  ++  +  +K+ V + + ++ +L ++G  +    ++
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM+ + I+ +L ++N ++ GLCKAGK N    +++DM S  + P V+T+N+LID + K+
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK+ +A+ ++K+M+  GI PN +T+N+L+DG+C    +S A  + + M  +  +  +
Sbjct: 289 ---GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+ SLI G C   ++DE + L  ++   GL  N VT + L+ GFC+   +E A  LF +
Sbjct: 346 VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQE 405

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G+ P V+TY  L+D  C  G++E A  +   +    +  D+  Y  +I G+ + G 
Sbjct: 406 MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           VE   N+   L   G++  ++TY +++  LCK G   +A  LL    KME++   PN  T
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNEPNDCT 522

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           YN LI+   + G L  +  L+ E+   G   + ++ ++V
Sbjct: 523 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 561



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 204/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++    +    +F  V    K+M+   I  N+ + N ++N  C+  K   A  ++
Sbjct: 64  SLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 123

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P   T+N LI+G C +    K+ +A  +   MVENG  PN VT+N++++G 
Sbjct: 124 GKVMKLGYEPDTTTFNTLINGLCLES---KVSEAVVLVARMVENGCQPNVVTYNSIVNGI 180

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  + S A+ +  +M    + A V TY+++I+ LC DG +D A++L  EM   G+K ++
Sbjct: 181 CKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSL 240

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N+L+ G CK         L  D++ + + P+VIT+N LID + KEG++++A  +   
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKE 300

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G+ P+  TYN L+ G   +  +    N+++ +V N     +VT+  L+   CK  +
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             + + L     K+ K     N VTY++L++GFCQ GKLE A  L  E++  G++P+  T
Sbjct: 361 VDEGMKLFR---KISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT 417

Query: 510 YQIVREEMMEKG 521
           Y I+ + + + G
Sbjct: 418 YGILLDGLCDNG 429



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 204/355 (57%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+  I   + L              FK     G+KSS+++ N L+  L K G
Sbjct: 209 STIIDSLCRDGCIDAAISL--------------FKEMETKGIKSSLVTYNSLVGGLCKAG 254

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K+ D   + K+M  R+I  N+ +FN +++   K GKL +A+++ ++M + G+SP  +TYN
Sbjct: 255 KWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYN 314

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC +    ++ +A+ +   MV N   P+ VTF +LI G+CK + +   MK+F ++
Sbjct: 315 SLMDGYCMQN---RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+ A  VTY+ L+ G C  GKL+ A  L  EM++ G+ P+V+T   L++G C    +
Sbjct: 372 SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKL 431

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +F+D+ +  ++  ++ Y  +I+  CK G++EDA+ +  S+  +GV P+V TY  +
Sbjct: 432 EKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 491

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+GL ++G++     ++ ++  +G      TYN L+ A  +DG    +  L++EM
Sbjct: 492 ISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 156/279 (55%), Gaps = 5/279 (1%)

Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           + GI  + + DA+  F++M+ +  LP+ V F+    G    +  +  +   ++M  +GIA
Sbjct: 38  RSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIA 97

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + T N +IN  C   K   A ++  ++M  G +P+  T N LING C +  V +A VL
Sbjct: 98  HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVL 157

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G  P+V+TYN++++  CK G    A  +   M +R V  DV TY+ +I  L R
Sbjct: 158 VARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCR 217

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           +G ++   ++  E+   G+++ LVTYN LVG LCK GK    V LL +   M   K  PN
Sbjct: 218 DGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD---MTSRKIIPN 274

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++T+NVLI  F ++GKL++AN L  E++ KG+ PN  TY
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY 313


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 243/507 (47%), Gaps = 69/507 (13%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           RLL S+   K+YP + S  +     G    V T+                  ++L+ ++ 
Sbjct: 72  RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL------------------NILINSFC 113

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
              +P   F    +    GL+    +   L+R L  EGK  D  +++ +M     + N+ 
Sbjct: 114 HLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 173

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY------ 241
           ++  ++NGLCK G  N A  ++  M+     P VV Y  +ID  CK   + + +      
Sbjct: 174 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 233

Query: 242 --------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
                                         +   M+ + I+P+ V F+T++D  CK+  I
Sbjct: 234 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 293

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
           + A  V + M   G+   VVTYN+L++G C+  ++DEAV + D M+ +G  PNV++ N L
Sbjct: 294 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 353

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING+CK + ++KA  LF+++ ++ L P+ +TYNTL+   C  GR++DA A+ + M+  G 
Sbjct: 354 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQ 413

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PD++TY  L+  L ++ +++    ++  +  + M   +  Y I++  +C+ G+ + A  
Sbjct: 414 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 473

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR- 514
           +      +  +   PN+ TY ++I G C++G L++AN L  E+   G  P+  TY  +  
Sbjct: 474 IFS---NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 530

Query: 515 ---------------EEMMEKGFIPDI 526
                          +EM+ +GF  D+
Sbjct: 531 GLLQNKEALRAIQLLQEMLARGFSADV 557



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 209/403 (51%), Gaps = 6/403 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S +  N+LL ++ K  ++  V  +  +M    I  ++ + N ++N
Sbjct: 51  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 110

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +   A  ++  +  LG+ P   T+  LI G C +G IG    A  +F  M+  G
Sbjct: 111 SFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGD---ALHLFDKMIGEG 167

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  N +AA+++   M        VV Y S+I+ LC D ++ EA 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +M+  G+ P++ T  +LI+  C     +    L + +    + P V+ ++T++DA 
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TYN L+ G   +  ++    + + +V+NG    +
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++YN L+   CK  +  KA  L +EM + E     PN VTYN L+ G C  G+L+DA  L
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKE---LIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            +E++  G IP+  TY+I+ + + +K  + +    +  I G++
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 214/440 (48%), Gaps = 14/440 (3%)

Query: 90  VKNGKFTSVSTIFHALSTCSDSLCR--------NSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + + +F S S  F+ L     S  R        +++  + L+ +  K  +    F    +
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
              +G+   V + N L+ +     +      V  ++ +  ++ +  +F  ++ GLC  GK
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +  A  + + M   G  P VVTY  LI+G CK   +G    A  + + M +    P+ V 
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCK---VGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + ++ID  CKD  ++ A  +F +M   GI+  + TY SLI+ LC   +      L ++M+
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            S + P+VV  + +++  CK+  + +A  + D +  +G+ P+V+TYN L+D +C +  M+
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + ++M+  G  P+V +YN LI G  +   ++    +  E+    +    VTYN L+
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LC  G+ + A++L  EM       + P++ TY +L+   C+K  L++A  LL  +   
Sbjct: 390 HGLCHVGRLQDAIALFHEMVA---HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446

Query: 502 GLIPNQTTYQIVREEMMEKG 521
            + P+   Y IV + M   G
Sbjct: 447 NMDPDIQIYTIVIDGMCRAG 466



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 7/305 (2%)

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           AL KEGK  +   V   M  R +E N+ ++N +++G C   ++++A  + + M   G +P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            V++YN LI+GYCK   I +M KA  +F++M +  ++PN VT+NTL+ G C    +  A+
Sbjct: 346 NVISYNTLINGYCK---IQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +F EM +HG    + TY  L++ LC    LDEA+AL   +  S + P++     +I+G 
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C+   +E AR +F ++S +GL P+V TY  +I+  C+ G +++A  +   M   G  PD 
Sbjct: 463 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 522

Query: 400 STYNCLIAGLSREGNVEGVRNI--MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            TYN +  GL +  N E +R I  + E++  G  A + T  +LV  LC D   +    +L
Sbjct: 523 CTYNTITQGLLQ--NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580

Query: 458 DEMFK 462
            E  +
Sbjct: 581 SEFVQ 585



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 15/283 (5%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  +  N      + FNTL D          A+  F  M         V +N L+  +  
Sbjct: 30  FSSLSHNRFHSKSLNFNTLDD----------ALSSFNRMLHMHPPPSTVDFNRLLTSIAK 79

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +     +L ++M + G+ P+V T N LIN FC       A  +   I + GL P   T
Sbjct: 80  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTAT 139

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI   C EG++ DA  + + M+  G  P+V TY  LI GL + GN      ++  + 
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 199

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
               +  +V Y  ++ +LCKD +  +A +L     KM  +   P+I TY  LI   C   
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS---KMVGQGISPDIFTYTSLIHSLCNLC 256

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           + +    LLN+++   ++P+   +  V + + ++G I   E H
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI--TEAH 297


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 210/382 (54%), Gaps = 6/382 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  +  K+  + G K +V+  + ++ +L K+    +      EM  R I  N+ +++ +L
Sbjct: 100 MAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSIL 159

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C  G+ N+A+ + + M    V P  VT+NIL+DG  K+G I    +A  VF+ M+E 
Sbjct: 160 HGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI---LEAQCVFETMIEK 216

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ PN  T+N L+DG+C    +  A K+F  M   G A  V +YN LI G C  G++DEA
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  EM    L P+ VT + L+ GFC+    + A+ L +++   GL P ++TY+ ++D 
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK+G +++AF +  +M +  + P++  Y  LI G+   G +E  R + + L   G++  
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY +++  L K G S +A  L  +   M      PN  TYNV+I+GF + G   +A  
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRD---MAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 494 LLNELLEKGLIPNQTTYQIVRE 515
           L+ E++ +G   + +T+Q++ +
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSD 475



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 217/390 (55%), Gaps = 6/390 (1%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H  F         GL+ + ++ + LL  L  + K  D   ++ EM +   E ++ +++ +
Sbjct: 29  HFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTI 88

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NGLCK G    A  +++ M+  G  P VV Y+ +ID  CK   I    +A     +MV 
Sbjct: 89  INGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLI---TEAMEFLSEMVN 145

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI PN VT+++++ GFC     + A  +F++M    +    VT+N L++GL  +G + E
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  + + M+  G++PNV T NAL++G+C +  +++A+ LF+ +  +G +PSV +YN LI 
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +CK GR+++A  +   M  + + PD  TY+ L+ G  ++G  +  + ++ E+ + G+  
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L+TY+I++  LCK G   +A  LL     M++ K  PNI  Y +LI+G C  GKLE A 
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLK---AMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            L + L  KG+ P+  TY ++   +++ G 
Sbjct: 383 ELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 212/376 (56%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V++ + ++  L K G       + K+M+ +  + N+  ++ +++ LCK   + +A
Sbjct: 77  GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEA 136

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + + +M + G+SP VVTY+ ++ G+C    +G+  +A ++FK MVE  ++P+ VTFN L
Sbjct: 137 MEFLSEMVNRGISPNVVTYSSILHGFCN---LGRSNEATSLFKQMVERNVMPDTVTFNIL 193

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG  K+  I  A  VFE M   G+   V TYN+L++G C   ++DEA  L + M+  G 
Sbjct: 194 VDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGC 253

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V + N LI G CK   +++A+ L  ++S + L+P  +TY+TL+  +C++GR +DA  
Sbjct: 254 APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G+LPD+ TY+ ++ GL ++G+++    ++  +  + +   +  Y IL+  +C
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMC 373

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             GK + A  L   +F    +   P++VTY V+I G  + G   +A  L  ++   G +P
Sbjct: 374 NFGKLEAARELFSNLFV---KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 506 NQTTYQIVREEMMEKG 521
           N  TY ++ +  +  G
Sbjct: 431 NSCTYNVIIQGFLRNG 446



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 180/326 (55%), Gaps = 20/326 (6%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P V T  ILI+ +C        + A +V  +M + G+ PN VTF+TL++G      I 
Sbjct: 6   IRPDVYTLTILINCFCHSNH-DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+K+F+EM   G    V+TY+++INGLC  G    A+ L  +M   G KPNVV  + +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +  CK KL+ +A     ++  +G+SP+V+TY++++  +C  GR  +A ++   M++R V+
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  T+N L+ GLS+EG +   + +   ++  G+   + TYN L+   C   +  +A  L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY------ 510
            + M    ++   P++ +YN+LIKG C+ G++++A GLL E+  K L P+  TY      
Sbjct: 245 FNIMV---RKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 511 ----------QIVREEMMEKGFIPDI 526
                     Q + EEM   G +PD+
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDL 327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 21/222 (9%)

Query: 323 SGLKPNVVTSNALINGFCKKK--LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           S ++P+V T   LIN FC         A  +  ++ + GL P+ +T++TL++    + ++
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            DA  + + M+  G  PDV TY+ +I GL + G+      ++ ++   G +  +V Y+ +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + +LCKD    +A+  L EM         PN+VTY+ ++ GFC  G+  +A  L  +++E
Sbjct: 124 IDSLCKDKLITEAMEFLSEMV---NRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 501 KGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
           + ++P+  T+                Q V E M+EKG  P++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 8/236 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L + +V     P +RS+   +    K+G+      +   +S    +L  +++    LM 
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMS--HKALTPDTVTYSTLMK 300

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + ++ +P    +  +    YGL   +++ + +L  L K+G  ++   + K M+  +IE 
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+  +  ++ G+C  GKL  A ++  ++   G+ P VVTY ++I G   KGG+    +A 
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL-KGGLSN--EAC 417

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +F+DM  +G LPN  T+N +I GF ++ + S A ++ EEM   G +A   T+  L
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 233/462 (50%), Gaps = 51/462 (11%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N+  +++L+  +       LGF    +    GL+ ++++   L+  L K G+F    
Sbjct: 122 LSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQAL 181

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ +M  R  + ++ ++  ++NGLCK G+   A+ +++ M  +G  P VVTY+ LID  
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241

Query: 232 CK----------------KG----------------GIGKMYKADAVFKDMVENGILPNE 259
           CK                KG                   +  +A A+  +M    I+P+ 
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VTF+ LID FCK+ N+  A  V + M   G+   V+TYNSL++G  +  ++ EA  L D 
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDV 361

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G KP+V + + LING+C  K +++A+ LF+++  QGL+P+ ++Y TLI A+C+ G+
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           + +A  +   M   G LPD+ TY+ L+ G  ++G +     +   +    ++  LV Y I
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ ++CK G    A  L  E+F    +   P++  Y  +I G C++G L++A     ++ 
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQ---PDVQIYTTIINGLCKEGLLDEALEAFRKME 538

Query: 500 EKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
           E G  PN+ +Y ++                  EM +KGF+ D
Sbjct: 539 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 6/370 (1%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           K+ G+ G +  V++ + L+ +L K+    +   ++  MK + I   + S+  ++ GLC  
Sbjct: 220 KKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSF 279

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
            +  +AS ++ +M SL + P +VT+++LID +CK+G +    +A  V K M E G+ PN 
Sbjct: 280 SRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV---LEAQGVLKTMTEMGVEPNV 336

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+N+L+ G+     +  A K+F+ M + G    V +Y+ LING C+  ++DEA  L +E
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  GL PN V+   LI+ FC+   + +AR LF D+   G  P + TY+ L++ +CK+G 
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +  AF +  +M    + P++  Y  LI  + + GN+   R + +EL  +G++  +  Y  
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++  LCK+G   +A   L+   KME++   PN  +YNV+I+GF Q      A  L+ E+ 
Sbjct: 517 IINGLCKEGLLDEA---LEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573

Query: 500 EKGLIPNQTT 509
           +KG + ++ T
Sbjct: 574 DKGFVADEGT 583



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 206/374 (55%), Gaps = 7/374 (1%)

Query: 151 VLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++  N+LL A+V+  ++ D V  + K+M+   +  N  + N ++N  C    ++    ++
Sbjct: 90  IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG+ P ++T+  LI+G CK G   +  +A  +F DMV  G  P+  T+ T+I+G 
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAG---EFAQALELFDDMVARGCQPDVYTYTTIINGL 206

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK    +AA  + ++MG  G    VVTY++LI+ LC D  ++EA+ +   M A G+ P V
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+  +LI G C     ++A  + ++++   + P ++T++ LID +CKEG + +A  +  +
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT 326

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M + GV P+V TYN L+ G S +  V   R + + ++  G +  + +Y+IL+   C   +
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  L +EM     +   PN V+Y  LI  FCQ GKL +A  L  ++   G +P+  T
Sbjct: 387 IDEAKQLFNEMI---HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443

Query: 510 YQIVREEMMEKGFI 523
           Y ++ E   ++G++
Sbjct: 444 YSVLLEGFCKQGYL 457



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 4/257 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVT 331
            NI  A+  F  M        ++ +N L++ +  +    D  ++L  +M  +GL PN  T
Sbjct: 69  RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LIN FC  + V+    +   + + GL P++IT+ TLI+  CK G    A  + + M+
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG  PDV TY  +I GL + G       ++ ++   G +  +VTY+ L+ +LCKD    
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A   LD    M+ +   P +V+Y  LI+G C   + ++A+ +LNE+    ++P+  T+ 
Sbjct: 249 EA---LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFS 305

Query: 512 IVREEMMEKGFIPDIEG 528
           ++ +   ++G + + +G
Sbjct: 306 LLIDIFCKEGNVLEAQG 322


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 232/434 (53%), Gaps = 22/434 (5%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I+D+L+  Y K          F +     L   V +CN++LR L  +        VY+ M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               I+  + ++N +L+  CK GK+ +  D++ +M+  G +P  VTYN+LI+G  KK   
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK--- 282

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G+  +A  +  +M++ G+  +  T+N LI G+     ++ A+ + EEM   G +  V TY
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           NS I GLC  G++ +A+    +M+A+ L P+VV+ N LI G+C+   + KA +LFD++  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
             L P+++TYNTL+D  C++G +E A  ++  M++ G+ PD+ TY  L+ G  + G++  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            +   +E+++ G+      Y   +    K G + +A SL +EM         P+++ YNV
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP---PDLIIYNV 519

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------RE---EMMEKG 521
           ++ G C+ G LE+A+ LL +++  G+IP+  TY  +             RE   EM+ KG
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579

Query: 522 FIPDIEGHMYNISG 535
             P +  +   I G
Sbjct: 580 LTPSVVTYTVLIHG 593



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 228/425 (53%), Gaps = 22/425 (5%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+ +Y K  K   G +        G   + ++ N L+  L K+G+FE  + +  E
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M +  ++++  ++N ++ G    G L +A  + E+M   G SP V TYN  I G CK   
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK--- 351

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G+M  A     DM+ N +LP+ V++NTLI G+C+  N+  A  +F+E+ S  +   +VT
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L++GLC  G+L+ A  L+ EM+  G+ P++VT   L+NG CK   +  A+  FD++ 
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL      Y T I    K G    AF+++  ML +G  PD+  YN ++ GL + GN+E
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ ++V++G+    VTY  ++ A  ++G+ +K   +  EM     +   P++VTY 
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML---SKGLTPSVVTYT 588

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------VRE---------EMMEK 520
           VLI G   KG+LE A    +E+ EKG++PN  TY         VR          EM+EK
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 521 GFIPD 525
           G  P+
Sbjct: 649 GIFPN 653



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 188/347 (54%), Gaps = 6/347 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V+S N L+    + G       ++ E++   +   + ++N +L+GLC+ G+L  A 
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +  +M + G++P +VTY IL++G CK   +G +  A   F +M+  G+  +   + T I
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCK---MGSLSMAQEFFDEMLHEGLELDSYAYATRI 486

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  K  + S A  + EEM + G    ++ YN +++GLC  G L+EA  L  +M++ G+ 
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT  ++I+   +   + K R +F ++  +GL+PSV+TY  LI  +  +GR+E AF  
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M ++G+LP+V TYN LI GL +   ++   N   E+V  G+     +Y IL+   C 
Sbjct: 607 FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCN 666

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            G  ++A+SL  +M     +   P+  T++ L+K   +  KL+  +G
Sbjct: 667 MGNWQEALSLYKQMLDRGVQ---PDSCTHSALLKQLGKDCKLQAVHG 710



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 165/297 (55%), Gaps = 8/297 (2%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           VS K++  ++LI  Y KK  + +     +VF  M+++ + P+    N ++      + +S
Sbjct: 162 VSVKIL--DLLIWVYSKKSMVEQCL---SVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V+  MG  GI   +VTYN+L++  C  GK+ + + L  EM   G  PN VT N LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG  KK   E+A+ L  ++ + GL  S  TYN LI  Y  +G + +A +++  M+ +G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V+TYN  I GL + G +      +++++ N +   +V+YN L+   C+ G   KA  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            DE+  +     +P IVTYN L+ G C++G+LE A  L  E++ +G+ P+  TY I+
Sbjct: 397 FDELRSI---YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 48/375 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN----SIIIDMLMLAYVKNMKPHLGFEAF 139
           SF++   K G+ +       A+   SD L  N     +  + L+  Y +       F  F
Sbjct: 344 SFIYGLCKLGRMSD------AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
                  L  ++++ N LL  L ++G+ E  + +  EM    I  ++ ++  ++NG CK 
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457

Query: 200 GKLNKASD-----------------------------------IMEDMKSLGVSPKVVTY 224
           G L+ A +                                   + E+M + G  P ++ Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N+++DG CK   +G + +A  + + MV +G++P+ VT+ ++I    ++  +    ++F E
Sbjct: 518 NVVVDGLCK---LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S G+   VVTY  LI+G    G+L+ A     EM   G+ PNV+T N+LING CK + 
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A   F ++ E+G+ P+  +Y  LI+  C  G  ++A ++   MLDRGV PD  T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 405 LIAGLSREGNVEGVR 419
           L+  L ++  ++ V 
Sbjct: 695 LLKQLGKDCKLQAVH 709


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 233/459 (50%), Gaps = 17/459 (3%)

Query: 11  DITELIRNH----HWSKL----KNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHS 62
           D   +  +H     W KL    K   P  +   L     D VL L++F W       SH+
Sbjct: 42  DFINIFHSHFIHSQWEKLTPFSKTLTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHT 101

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS-IIIDM 121
           L     LLH L   + +   +S     +     T+ S +F +L   S +LC +S ++ D 
Sbjct: 102 LHTHSFLLHILTKNRNFKTAQSIFSKII-----TTNSNLFESL-LHSYTLCNSSPLVFDT 155

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L   +    K     + F +  +YG   +V SCN  L +++   + E V   Y++M+R R
Sbjct: 156 LFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNR 215

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  N+ + N V++  CK G+LNKAS+++E MK +G+ P VVT+N LI GYC KG +G   
Sbjct: 216 ISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLAL 275

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           K   +   M +NG+ PN VTFNTLI+GFCK+  +  A +VF EM    +A  VVTYN+LI
Sbjct: 276 KVRDLM--MGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLI 333

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NG    G  +  + L +EM  + +K +++T N LI G CK+   +KA  +  ++ +  L 
Sbjct: 334 NGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLV 393

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+  T++ LI   C     E AF +  SM+  G  P+ +T+  L +   +  + +G   +
Sbjct: 394 PNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQV 453

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           + +++   M       + +   LC+ G+ + A+ L  E+
Sbjct: 454 LRDMLERFMTPDSSILSEVYSGLCRCGRKQFALMLCSEI 492



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 20/306 (6%)

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + K+  A   F  M E G  P   + N  +      +     +  + +M  + I+  V T
Sbjct: 163 MNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYT 222

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD-DI 355
            N +++  C  G+L++A  + ++M   GL PNVVT N+LI+G+C K L+  A  + D  +
Sbjct: 223 INMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMM 282

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            + G+ P+V+T+NTLI+ +CKEG++ +A  + + M    V P+V TYN LI G  + GN 
Sbjct: 283 GKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNS 342

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    +  E+  N ++A ++TYN L+  LCK+GK+KKA  ++ E+   +K    PN  T+
Sbjct: 343 EMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKEL---DKGNLVPNASTF 399

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMME 519
           + LI G C +   E A  +   ++  G  PN+ T+++                V  +M+E
Sbjct: 400 SALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLE 459

Query: 520 KGFIPD 525
           +   PD
Sbjct: 460 RFMTPD 465



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 153/299 (51%), Gaps = 22/299 (7%)

Query: 246 VFKDMVENGILPNE--VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           +F+ ++ +  L N   + F+TL   F     +  A   F +M  +G    V + N+ ++ 
Sbjct: 135 LFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSS 194

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           +    + +  V+   +M  + + PNV T N +++ +CK   + KA  + + + + GL P+
Sbjct: 195 MLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPN 254

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           V+T+N+LI  YC +G +  A  +R+ M+ + GV P+V T+N LI G  +EG +     + 
Sbjct: 255 VVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVF 314

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+    +   +VTYN L+    + G S+  + L +EM   E+ K   +I+TYN LI G 
Sbjct: 315 SEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEM---ERNKVKADILTYNGLILGL 371

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPD 525
           C++GK + A  ++ EL +  L+PN +T+                 +V   M+  GF P+
Sbjct: 372 CKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPN 430


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 262/533 (49%), Gaps = 71/533 (13%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           T++++ F S +     L  F   TK L    +++    LLH L V  +  +     H   
Sbjct: 117 TILMKCFCSCSKLPFALSTFGKITK-LGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K    T         +T  + LCR   +++ + L                R  + GL+ +
Sbjct: 176 KPNVVT--------FTTLMNGLCREGRVVEAVAL--------------LDRMLEDGLQPN 213

Query: 151 VLSCNQLLRALVKEG----------KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
            ++   ++  + K G          K E+V ++    K   +   L+    ++NG C +G
Sbjct: 214 QITYGTIVDGMCKMGDTVSALNLLRKMEEVSHI----KPNVVIWPLERRTCMINGFCSSG 269

Query: 201 KLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           + ++A  ++++M +   +SP VVTYN LI+ + K+G   K ++A+ ++ +M+  GI+P+ 
Sbjct: 270 RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPST 326

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T++++IDGFCK   + AA  +F  M + G +  ++T+N+LI G C   ++D+ + L  E
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GL  N +T   LI+GFC+   +  A+ L  ++   G+ P+V+T NTL+D  C  G+
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446

Query: 380 MEDAF----AMRNSMLD-------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           ++DA     AM+ S +D        GV PDV TYN LI+GL  EG       +  E+ + 
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    +TYN ++  LCK  +  +A  + D    M  +   PN+VT+  LI G+C+ G++
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFD---SMGSKSFSPNVVTFTTLINGYCKAGRV 563

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           +D   L  E+  +G++ N  TY                  + +EMM  G  PD
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 223/418 (53%), Gaps = 30/418 (7%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+    +LM  +    K       F +    G   +V++ + LL  L  E +  +   ++
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M +     N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK 
Sbjct: 172 HQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK- 226

Query: 235 GGIGKMYKADAVFKDMVE-NGILPNEVTF-----NTLIDGFCKDENISAAMKVFEEM-GS 287
             +G    A  + + M E + I PN V +       +I+GFC     S A ++ +EM   
Sbjct: 227 --MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
             I+  VVTYN+LIN    +GK  EA  L DEM+  G+ P+ +T +++I+GFCK+  ++ 
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +F  ++ +G SP +IT+NTLI  YC+  R++D   + + M + G++ +  TY  LI 
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  + G++   ++++ E+V++G+   +VT N L+  LC +GK K A+    EMFK  ++ 
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL----EMFKAMQKS 460

Query: 468 KW------------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           K             P++ TYN+LI G   +GK  +A  L  E+  +G++P+  TY  V
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 198/368 (53%), Gaps = 48/368 (13%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ N L+ A VKEGKF + E +Y EM  R I  +  +++ +++G CK  +L+ A 
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCK---------------KGG--------------- 236
            +   M + G SP ++T+N LI GYC+               + G               
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406

Query: 237 --IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------G 286
             +G +  A  + ++MV +G+ PN VT NTL+DG C +  +  A+++F+ M         
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466

Query: 287 SH---GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           SH   G+   V TYN LI+GL  +GK  EA  L +EM   G+ P+ +T N++I+G CK+ 
Sbjct: 467 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  +FD +  +  SP+V+T+ TLI+ YCK GR++D   +   M  RG++ +  TY 
Sbjct: 527 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 586

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--- 460
            LI G  + GN+ G  +I  E++ +G+    +T   ++  L    + K+AV++L+++   
Sbjct: 587 TLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646

Query: 461 --FKMEKE 466
             +++E E
Sbjct: 647 VGYQLEDE 654



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 200/428 (46%), Gaps = 57/428 (13%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           R G+ G     L     LR+   E K  ED   ++ +M R R   ++  F  ++  + + 
Sbjct: 36  RDGESGFGGESLK----LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRM 91

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G+L+    +   M+   V     ++ IL+  +C      K+  A + F  + + G  P  
Sbjct: 92  GRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCS---CSKLPFALSTFGKITKLGFHPTV 148

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VTF+TL+ G C ++ IS A+ +F +M        VVT+ +L+NGLC +G++ EAVAL D 
Sbjct: 149 VTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDR 204

Query: 320 MMASGLKPNVVT-----------------------------------------SNALING 338
           M+  GL+PN +T                                            +ING
Sbjct: 205 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMING 264

Query: 339 FCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           FC      +A+ L  ++ E+  +SP V+TYN LI+A+ KEG+  +A  + + ML RG++P
Sbjct: 265 FCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 324

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
              TY+ +I G  ++  ++   ++   +   G    ++T+N L+   C+  +    + LL
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 384

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            E   M +     N +TY  LI GFCQ G L  A  LL E++  G+ PN  T   + + +
Sbjct: 385 HE---MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGL 441

Query: 518 MEKGFIPD 525
            + G + D
Sbjct: 442 CDNGKLKD 449



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 155/297 (52%), Gaps = 13/297 (4%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F DMV +  LP+ + F  L+    +   +   + +  +M    +     ++  L+   C
Sbjct: 65  LFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFC 124

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              KL  A++   ++   G  P VVT + L++G C +  + +A  LF     Q   P+V+
Sbjct: 125 SCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF----HQMCKPNVV 180

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+ TL++  C+EGR+ +A A+ + ML+ G+ P+  TY  ++ G+ + G+     N++ ++
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240

Query: 426 VN-NGMRAGLVTYNI-----LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
              + ++  +V + +     ++   C  G+  +A  LL EM  +E++K  P++VTYN LI
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEM--LERKKISPDVVTYNALI 298

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
             F ++GK  +A  L +E+L +G+IP+  TY  + +   ++  + D   HM+ +  T
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL-DAAEHMFYLMAT 354



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 19/270 (7%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LLH +  A       ++   +H F + G   +   +   +   S  +C N +  + L+ 
Sbjct: 382 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM--VSSGVCPNVVTCNTLLD 439

Query: 125 AYVKNMKPHLGFEAFKRAGDY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYV 173
               N K     E FK                G++  V + N L+  L+ EGKF + E +
Sbjct: 440 GLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 499

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y+EM  R I  +  ++N V++GLCK  +L++A+ + + M S   SP VVT+  LI+GYCK
Sbjct: 500 YEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 559

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G +    +   +F +M   GI+ N +T+ TLI GF K  NI+ A+ +F+EM + G+   
Sbjct: 560 AGRVDDGLE---LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +T  +++ GL    +L  AVA+ +++  S
Sbjct: 617 TITIRNMLTGLWSKEELKRAVAMLEDLQMS 646


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 238/473 (50%), Gaps = 54/473 (11%)

Query: 76  AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
           A+K+  + S       NG ++SV++ F      S++  R            V+  +   G
Sbjct: 72  AQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ----------MVRTGELEEG 121

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+  +    +G    ++ C  L+R   + GK      + + ++      ++ ++N +++G
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            CKAG++N A  +++ M    VSP VVTYN ++   C     GK+ +A  V   M++   
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDS---GKLKQAMEVLDRMLQRDC 235

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ +T+  LI+  C+D  +  AMK+ +EM   G    VVTYN L+NG+C +G+LDEA+ 
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 316 LRDEMMASGLKPNVVTS-----------------------------------NALINGFC 340
             ++M +SG +PNV+T                                    N LIN  C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           +K L+ +A  + + + + G  P+ ++YN L+  +CKE +M+ A      M+ RG  PD+ 
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN ++  L ++G VE    I+N+L + G    L+TYN ++  L K GK+ KA+ LLDEM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              + +   P+ +TY+ L+ G  ++GK+++A    +E    G+ PN  T+  +
Sbjct: 476 RAKDLK---PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 239/471 (50%), Gaps = 21/471 (4%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIF 102
           ++R FC   K  +A+       ++L  L  +   P + ++  M   + K G+  +  ++ 
Sbjct: 143 LIRGFCRLGKTRKAA-------KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             +S   D +  N+I+  +     +K        E   R         V++   L+ A  
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQ-----AMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           ++        +  EM+ R    ++ ++N ++NG+CK G+L++A   + DM S G  P V+
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T+NI++   C     G+   A+ +  DM+  G  P+ VTFN LI+  C+   +  A+ + 
Sbjct: 311 THNIILRSMCS---TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M  HG     ++YN L++G C + K+D A+   + M++ G  P++VT N ++   CK 
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             VE A  + + +S +G SP +ITYNT+ID   K G+   A  + + M  + + PD  TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GLSREG V+      +E    G+R   VT+N ++  LCK  ++ +A+  L  +F 
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL--VFM 545

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + +  K PN  +Y +LI+G   +G  ++A  LLNEL  KGL+   +  Q+ 
Sbjct: 546 INRGCK-PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVA 595



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 193/367 (52%), Gaps = 9/367 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  LR +V+ G+ E+     + M       ++     ++ G C+ GK  KA+ I+E ++ 
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V+TYN++I GYCK G I     A +V   M    + P+ VT+NT++   C    
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINN---ALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  AM+V + M        V+TY  LI   C D  +  A+ L DEM   G  P+VVT N 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+NG CK+  +++A    +D+   G  P+VIT+N ++ + C  GR  DA  +   ML +G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P V T+N LI  L R+G +    +I+ ++  +G +   ++YN L+   CK+ K  +A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
             L+ M        +P+IVTYN ++   C+ GK+EDA  +LN+L  KG  P   TY  V 
Sbjct: 400 EYLERMVS---RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 515 EEMMEKG 521
           + + + G
Sbjct: 457 DGLAKAG 463



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 182/333 (54%), Gaps = 9/333 (2%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           L  + + G+L +    +E+M   G  P ++    LI G+C+   +GK  KA  + + +  
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR---LGKTRKAAKILEILEG 165

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G +P+ +T+N +I G+CK   I+ A+ V + M    ++  VVTYN+++  LC  GKL +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ + D M+     P+V+T   LI   C+   V  A  L D++ ++G +P V+TYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CKEGR+++A    N M   G  P+V T+N ++  +   G       ++ +++  G   
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VT+NIL+  LC+ G   +A+ +L+   KM +    PN ++YN L+ GFC++ K++ A 
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILE---KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             L  ++ +G  P+  TY  +   + + G + D
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 164/305 (53%), Gaps = 22/305 (7%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G++ +     ++MV +G +P+ +   TLI GFC+      A K+ E +   G    V+TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N +I+G C  G+++ A+++ D M  S   P+VVT N ++   C    +++A  + D + +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +   P VITY  LI+A C++  +  A  + + M DRG  PDV TYN L+ G+ +EG ++ 
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
               +N++ ++G +  ++T+NI++ ++C  G+   A  LL +M    ++   P++VT+N+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNI 349

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKG 521
           LI   C+KG L  A  +L ++ + G  PN  +Y  +                 E M+ +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 522 FIPDI 526
             PDI
Sbjct: 410 CYPDI 414



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 18/314 (5%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF--KDMVENGILPNEVTFNTLIDGF 269
           ++S G++ +   +  L  GY    G G     ++ F  +D+  N  L   V    L +GF
Sbjct: 63  VESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGF 122

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                     K  E M  HG    ++   +LI G C  GK  +A  + + +  SG  P+V
Sbjct: 123 ----------KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T N +I+G+CK   +  A  + D +S   +SP V+TYNT++ + C  G+++ A  + + 
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML R   PDV TY  LI    R+  V     +++E+ + G    +VTYN+LV  +CK+G+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+  L++   M      PN++T+N++++  C  G+  DA  LL ++L KG  P+  T
Sbjct: 290 LDEAIKFLND---MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 510 YQIVREEMMEKGFI 523
           + I+   +  KG +
Sbjct: 347 FNILINFLCRKGLL 360



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 121/234 (51%), Gaps = 8/234 (3%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V  N+ +  +   G+L+E     + M+  G  P+++    LI GFC+     KA  + + 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREG 413
           +   G  P VITYN +I  YCK G + +A     S+LDR  V PDV TYN ++  L   G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSG 218

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    +++ ++       ++TY IL+ A C+D     A+ LLDE   M      P++V
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE---MRDRGCTPDVV 275

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           TYNVL+ G C++G+L++A   LN++   G  PN  T+ I+   M   G   D E
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 235/462 (50%), Gaps = 41/462 (8%)

Query: 101 IFHALSTCSDSLCRNSII--------IDMLMLAYVKNMKPH-LGFEAFKRAGDYGLKSSV 151
           +F +  +   +LC  S++        +  L+L      +PH      + +     +   V
Sbjct: 26  LFKSALSADRALCPLSVLPHLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPV 85

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S + LL +L     F     ++ ++ R R+ L   +FN +L  LC  GK  +A +++  
Sbjct: 86  ASLHPLLSSLPSAPAFA----LFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQ 141

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFC 270
           M      P  VTYN +I G+C +G   ++  A  V ++M E G I P++ T+ TLI G+C
Sbjct: 142 MPR----PNAVTYNTVIAGFCARG---RVQAALEVMREMRERGGIAPDKYTYATLISGWC 194

Query: 271 KDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           K   +  A+KVF+EM + G +A   V YN+LI G C  GKLD A+  R++M+  G+   V
Sbjct: 195 KIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTV 254

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N L++          A  + +++ + G SP V TYN LI+ YCKEG  + A  +   
Sbjct: 255 ATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEE 314

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +GV     TY  LI   SR+G V+    + N  V  G+R  +V YN L+ + C  G 
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A  ++ EM   EK++  P+ +TYN L++GFC  G+L++A  L++E+ ++G+ P+  +
Sbjct: 375 MERAYEIMAEM---EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVS 431

Query: 510 YQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           Y                  VR+EMM+KGF P +  +   I G
Sbjct: 432 YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 207/394 (52%), Gaps = 49/394 (12%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +LR L   GK      + ++M R     N  ++N V+ G C  G++  A ++M +M+ 
Sbjct: 120 NIMLRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREMRE 175

Query: 215 LG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKD 272
            G ++P   TY  LI G+CK   IG+M  A  VF +M+  G + P+ V +N LI G+C  
Sbjct: 176 RGGIAPDKYTYATLISGWCK---IGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A++  E+M   GIA  V TYN L++ L +D +  +A A+ +EM  +G  P+V T 
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 333 NALINGFCKKKLVEKARVLFDDISEQG--------------------------------- 359
           N LING+CK+   +KA  +F+++S++G                                 
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 360 --LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
             + P V+ YN LI+++C  G ME A+ +   M  + + PD  TYN L+ G    G ++ 
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYN 476
            R +++E+   G++  LV+YN L+      G  K A+ + DEM     +K + P ++TYN
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM----DKGFNPTLMTYN 468

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            LI+G C+  + +DA  L+ E++ KG+ P+ +TY
Sbjct: 469 ALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 182/338 (53%), Gaps = 7/338 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G+     +   L+    K G+ ED   V+ EM  +  +  +   +N ++ G C  GKL+ 
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A    EDM   G++  V TYN+L+            Y   AV ++M +NG  P+  T+N 
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAY---AVLEEMQKNGFSPDVFTYNI 294

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+G+CK+ N   A++VFEEM   G+ A  VTY SLI      G++ E   L +  +  G
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+VV  NALIN  C    +E+A  +  ++ ++ + P  +TYNTL+  +C  GR+++A 
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M  RG+ PD+ +YN LI+G S +G+++    + +E+++ G    L+TYN L+  L
Sbjct: 415 TLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL 474

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           CK  +   A +L+ EM     +   P+  TY  LI+G 
Sbjct: 475 CKIRQGDDAENLMKEMV---AKGITPDDSTYISLIEGL 509



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 13/405 (3%)

Query: 50  FCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCS 109
            C +T  +   H L  TG+ + +L + ++ P+  +  +  V  G F +   +  AL    
Sbjct: 114 LCTTTFNIMLRH-LCATGKPVRALELLRQMPRPNAVTYNTVIAG-FCARGRVQAALEVMR 171

Query: 110 DSLCRNSIIID-----MLMLAYVKNMKPHLGFEAFKRAGDYG-LKSSVLSCNQLLRALVK 163
           +   R  I  D      L+  + K  +     + F      G +  S +  N L+     
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 164 EGKFEDVEYVYKE-MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
            GK  DV   Y+E M +R I + + ++N +++ L    + + A  ++E+M+  G SP V 
Sbjct: 232 VGKL-DVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYNILI+GYCK+G      KA  VF++M + G+    VT+ +LI  F +   +    ++F
Sbjct: 291 TYNILINGYCKEG---NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF 347

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
                 GI   VV YN+LIN  C  G ++ A  +  EM    + P+ +T N L+ GFC  
Sbjct: 348 NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLL 407

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +++AR L D+++++G+ P +++YNTLI  Y  +G ++DA  +R+ M+D+G  P + TY
Sbjct: 408 GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTY 467

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N LI GL +    +   N+M E+V  G+     TY  L+  L  +
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 213/373 (57%), Gaps = 10/373 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L +LVK   +  V Y+ ++M+ R I+ NL + N ++N  C+ G +  A  ++  +  
Sbjct: 66  NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILK 125

Query: 215 LGVSPKVVTYNILIDGYCKKGGI-------GKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +G  P  +T N LI G C  G I       GK+  A  +F  M+   I P+  TF  L+D
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVD 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFCK+  +  A  V   M   GI  GVVTYNSL++G  +  ++++A ++ + M   G+ P
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++ + + LINGFCK K++++A  L  ++  + + P+V+TY++LID  CK G++  A  + 
Sbjct: 246 DIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLV 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M DRG  P++ TY+ ++  L +   V+    ++ ++ N G++  + TY IL+  LC+ 
Sbjct: 306 DEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQS 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK + A  + +++          N+ TY V+I+GFC KG  ++A  LL+++ + G IPN 
Sbjct: 366 GKLEDARKVFEDLLVKGHNL---NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNA 422

Query: 508 TTYQIVREEMMEK 520
            TY+I+   + +K
Sbjct: 423 KTYEIIILSLFKK 435



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 233/447 (52%), Gaps = 27/447 (6%)

Query: 75  VAKKYPKIRSFLHMFVKNGKFTSVSTIFH-------ALSTCSDSLCRN----SIIIDMLM 123
           V+KK+   +  ++       + S ST FH       A+S  +  L +N    +I  + ++
Sbjct: 10  VSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKIL 69

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            + VK+   H      ++    G+K ++++CN L+ +  + G       V  ++ +   +
Sbjct: 70  GSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYK 129

Query: 184 LNLDSFNFVLNGLCK----------AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            N  + N ++ GLC            GKL  A D+   M    ++P V T+ IL+DG+CK
Sbjct: 130 PNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCK 189

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G   ++ +A  V   M+  GI P  VT+N+L+DG+   + ++ A  +F  M   G++  
Sbjct: 190 EG---RVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPD 246

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           + +Y+ LING C    +DEA+ L  EM    + PNVVT ++LI+G CK   +  A  L D
Sbjct: 247 IQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVD 306

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ ++G  P+++TY++++DA CK  ++++A A+   M ++G+ P++ TY  LI GL + G
Sbjct: 307 EMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSG 366

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +E  R +  +L+  G    + TY +++   C  G   +A++LL    KME     PN  
Sbjct: 367 KLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLS---KMEDNGCIPNAK 423

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLE 500
           TY ++I    +K + E A  LL E++E
Sbjct: 424 TYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 194/344 (56%), Gaps = 16/344 (4%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +L  L K+   +    + + M+  G+ P +V  NILI+ +C+   +G +  A +V  
Sbjct: 65  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQ---LGHIPSAFSVLT 121

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENI----------SAAMKVFEEMGSHGIAAGVVTYN 298
            +++ G  PN +T NTLI G C +  I            A+ +F +M    I   V T+ 
Sbjct: 122 KILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            L++G C +G++ EA  +   MM  G+KP VVT N+L++G+   K V KA+ +F+ +++ 
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+SP + +Y+ LI+ +CK   M++A  +   M  + ++P+V TY+ LI GL + G +   
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++E+ + G    +VTY+ ++ ALCK+ +   A++LL +M   + +   PN+ TY +L
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM---KNQGIQPNMYTYTIL 358

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           IKG CQ GKLEDA  +  +LL KG   N  TY ++ +   +KG 
Sbjct: 359 IKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 166/294 (56%), Gaps = 3/294 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    KEG+ ++ + V   M  + I+  + ++N +++G     ++NKA  I   M  LG
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           VSP + +Y+ILI+G+CK   I  M +A  + K+M    I+PN VT+++LIDG CK   IS
Sbjct: 243 VSPDIQSYSILINGFCK---IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+K+ +EM   G    +VTY+S+++ LC + ++D A+AL  +M   G++PN+ T   LI
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G C+   +E AR +F+D+  +G + +V TY  +I  +C +G  ++A  + + M D G +
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           P+  TY  +I  L ++   E    ++ E++       +   N L+ ++   G S
Sbjct: 420 PNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSS 473



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 12/301 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  V++ N L+       +    + ++  M +  +  ++ S++ ++NG CK   +++A
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++++M    + P VVTY+ LIDG CK G I    K   +  +M + G  PN VT++++
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK---LVDEMHDRGQPPNIVTYSSI 323

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK+  +  A+ +  +M + GI   + TY  LI GLC  GKL++A  + ++++  G 
Sbjct: 324 LDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             NV T   +I GFC K L ++A  L   + + G  P+  TY  +I +  K+   E A  
Sbjct: 384 NLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEK 443

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN--ILVGA 443
           +   M++      V+  N LIA +   G+  G     N L+    + G   YN  I+VG 
Sbjct: 444 LLCEMIETNFDGRVALTNDLIASIWVTGSSPG-----NSLLCK--KQGKAAYNTPIMVGP 496

Query: 444 L 444
           L
Sbjct: 497 L 497


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 209/376 (55%), Gaps = 20/376 (5%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  VL+   L+  L +EG+  +   +   M    ++ +  ++   ++G+CK G    A +
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 208 IMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++  M+ +  + P VV Y+ +IDG CK G   +   +  +F +M + GI PN VT+N +I
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDG---RHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC     SAA ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ 
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T N++I+GFCK+  ++ A  +F  ++ +G SP V T+ TLID YC   R++D   +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  RG++ +  TYN LI G    G++    ++  +++++G+   +VT N L+  LC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK  ++ K             P+++TYN+LI G   +GK  +A  L
Sbjct: 476 NGKLKDAL----EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 495 LNELLEKGLIPNQTTY 510
             E+  +G++P+  TY
Sbjct: 532 YEEMPHRGIVPDTITY 547



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 218/406 (53%), Gaps = 33/406 (8%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V+  + ++  L K+G+  D   ++ EM+ + I  N+ ++N ++ G C +G+ + A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++++M    +SP VVTYN LI+ + K+   GK ++A  ++ +M+  GI+PN +T+N++I
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKE---GKFFEAAELYDEMLPRGIIPNTITYNSMI 365

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK + + AA  +F  M + G +  V T+ +LI+G C   ++D+ + L  EM   GL 
Sbjct: 366 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 425

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF-- 384
            N VT N LI+GFC    +  A  L   +   G+ P ++T NTL+D  C  G+++DA   
Sbjct: 426 ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485

Query: 385 --AMRNSMLD-------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             AM+ S +D        GV PDV TYN LI GL  EG       +  E+ + G+    +
Sbjct: 486 FKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY+ ++  LCK  +  +A  +      M  +   PN+VT+N LI G+C+ G+++D   L 
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMF---VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 496 NELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            E+  +G++ +   Y                  + +EM+  G  PD
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 17/408 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +I   ++    K+ +       F    D G+  ++++ N ++      G++   + + 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R+I  N+ ++N ++N   K GK  +A+++ ++M   G+ P  +TYN +IDG+CK+
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A+ +F  M   G  P+  TF TLIDG+C  + I   M++  EM   G+ A  
Sbjct: 372 ---DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LI+G C+ G L+ A+ L  +M++SG+ P++VT N L++G C    ++ A  +F  
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 355 ISEQ-----------GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           + +            G+ P V+TYN LI     EG+  +A  +   M  RG++PD  TY+
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I GL ++  ++    +   + +      +VT+N L+   CK G+    + L  E   M
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE---M 605

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            +     + + Y  LI GF + G +  A  +  E++  G+ P+  T +
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 653



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 208/406 (51%), Gaps = 34/406 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+  N+L+ A+V+  + + V  +Y++M+R++I  ++ SF  ++   C   KL  A    
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------GKMY 241
             +  LG+ P VVT+  L+ G C    +                            G++ 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVV 199

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG--SHGIAAGVVTYNS 299
           +A A+   MVENG+ P+++T+ T +DG CK  +  +A+ +  +M   SH I   VV Y++
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSA 258

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+GLC DG+  ++  L  EM   G+ PN+VT N +I GFC       A+ L  ++ E+ 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           +SP+V+TYN LI+A+ KEG+  +A  + + ML RG++P+  TYN +I G  ++  ++   
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++   +   G    + T+  L+   C   +    + LL EM    +     N VTYN LI
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM---PRRGLVANTVTYNTLI 435

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            GFC  G L  A  L  +++  G+ P+  T   + + + + G + D
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 198/363 (54%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ N L+ A VKEGKF +   +Y EM  R I  N  ++N +++G CK  +L+ A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+   M + G SP V T+  LIDGYC   G  ++     +  +M   G++ N VT+NTLI
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYC---GAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GFC   +++AA+ + ++M S G+   +VT N+L++GLC +GKL +A+ +   M  S   
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V+T N LI G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M  SM  +   P+V T+N LI G  + G V+    +  E+   G+ A  +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  L+    K G    A+ +  EM        +P+ +T   ++ GF  K +LE A  +L
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGFWSKEELERAVAML 672

Query: 496 NEL 498
            +L
Sbjct: 673 EDL 675



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 183/345 (53%), Gaps = 11/345 (3%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            ED   ++ +M R R   ++  FN ++  + +  + +    + + M+   +   + ++ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI  +C      K+  A + F  + + G+ P+ VTF TL+ G C D  +S A+ +F ++ 
Sbjct: 122 LIKCFCS---CSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
                  V+T+ +L+NGLC +G++ EAVAL D M+ +GL+P+ +T    ++G CK     
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 347 KARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            A  L   + E   + P+V+ Y+ +ID  CK+GR  D+  +   M D+G+ P++ TYNC+
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G    G     + ++ E++   +   +VTYN L+ A  K+GK  +A  L DEM     
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML---P 351

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
               PN +TYN +I GFC++ +L+ A  +   +  KG  P+  T+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 155/297 (52%), Gaps = 24/297 (8%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F DM+ +  LP+ + FN L+    + E     + ++++M    I   + ++  LI   C
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              KL  A++   ++   GL P+VVT   L++G C    V +A  LF  I      P V+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVL 183

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+ TL++  C+EGR+ +A A+ + M++ G+ PD  TY   + G+ + G+     N++ ++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 426 VN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
              + ++  +V Y+ ++  LCKDG+   + +L  E   M+ +  +PNIVTYN +I GFC 
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE---MQDKGIFPNIVTYNCMIGGFCI 300

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQ-----IVRE-----------EMMEKGFIPD 525
            G+   A  LL E+LE+ + PN  TY       V+E           EM+ +G IP+
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 22/265 (8%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ +F +M        V+ +N L+  +    + D  ++L  +M    ++ ++ +   LI 
Sbjct: 65  AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            FC    +  A   F  +++ GL P V+T+ TL+   C + R+ +A  + + +      P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRP 180

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV T+  L+ GL REG V     +++ +V NG++   +TY   V  +CK G +  A++LL
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY------- 510
            +M ++   K  PN+V Y+ +I G C+ G+  D++ L  E+ +KG+ PN  TY       
Sbjct: 241 RKMEEISHIK--PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 511 ---------QIVREEMMEKGFIPDI 526
                    Q + +EM+E+   P++
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNV 323


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 211/389 (54%), Gaps = 23/389 (5%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K G  +    V   M R   + ++ ++N +++GLCK G++++A  ++  M  
Sbjct: 305 NMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              SP  VTYN +I   CK+  + +  K   V   +   GILP+  T+N+LI G C   N
Sbjct: 365 RDCSPNTVTYNTIISTLCKENQVEEATKLALV---LTGKGILPDVCTYNSLIQGLCLSRN 421

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            + AM++++EM + G      TYN LI+ LC  GKL EA+ L  EM  SG   NV+T N 
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+GFCK K + +A  +FD +  QG+S + +TYNTLID  CK  R+E+A  + + M+  G
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD  TYN L+    + G+++   +I+  + ++G    +VTY  L+  LCK G+ + A 
Sbjct: 542 LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAAT 601

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL    +M+     P+   YN +I+   ++ + ++A  L  E++EK   P+  TY+IV 
Sbjct: 602 KLL-RTIQMKGINLTPH--AYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVF 658

Query: 515 E-----------------EMMEKGFIPDI 526
                             EM+E+G++P+ 
Sbjct: 659 RGLCQGGGPIGEAVDFVMEMLERGYVPEF 687



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 263/557 (47%), Gaps = 63/557 (11%)

Query: 6   NSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLL 65
            ST++  T    +HH +  K T  +T  L    ++ +P+        +    R S +   
Sbjct: 4   TSTLKYHTWFPFHHHLASHKPTSNST--LSFATTNHEPLTT-----TTNSATRLSPNFTP 56

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF----HALSTCSDSLCRNSIIIDM 121
           T +LLHSL   +    +    +   K   F   S+IF    H L    +      I+ +M
Sbjct: 57  T-QLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM 115

Query: 122 -LMLAYVKNMKPHLGFEAFKRAG--------------DYGLKSSVLSCNQLLRALVKEGK 166
            + L+ + N    +  E++   G              ++G+ ++    N LL  LV   K
Sbjct: 116 KISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNK 175

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            + VE  +  M  R I  ++ +FN ++  LC+A ++  A  +ME+M+  G+ P   T+  
Sbjct: 176 LKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTT 235

Query: 227 LIDGYCKKGGI--------------------------------GKMYKADAVFKDM-VEN 253
           ++ G+ ++G +                                G++ +A    ++M +  
Sbjct: 236 IMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE 295

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  P++ TFN L++G  K  ++  A++V + M   G    + TYNSLI+GLC  G++DEA
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           V + ++M+     PN VT N +I+  CK+  VE+A  L   ++ +G+ P V TYN+LI  
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQG 415

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C       A  +   M  +G  PD  TYN LI  L   G ++   N++ E+  +G    
Sbjct: 416 LCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARN 475

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           ++TYN L+   CK+ +  +A  + D+   ME +    N VTYN LI G C+  ++E+A+ 
Sbjct: 476 VITYNTLIDGFCKNKRIAEAEEIFDQ---MELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532

Query: 494 LLNELLEKGLIPNQTTY 510
           L+++++ +GL P++ TY
Sbjct: 533 LMDQMIMEGLRPDKFTY 549



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 37/264 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++ N L+    K  +  + E ++ +M+ + +  N  ++N +++GLCK+ ++ +A
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S +M+ M   G+ P   TYN L+  +CK G I    KA  + + M  +G  P+ VT+ TL
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIK---KAADIVQTMASDGCEPDIVTYGTL 587

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   + AA K+   +   GI      YN +I  L    +  EAV L  EM+    
Sbjct: 588 IAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAE 647

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ VT   +  G C                 QG  P                 + +A  
Sbjct: 648 APDAVTYKIVFRGLC-----------------QGGGP-----------------IGEAVD 673

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGL 409
               ML+RG +P+ S++  L  GL
Sbjct: 674 FVMEMLERGYVPEFSSFYMLAEGL 697



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 8/281 (2%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN I  + L+  + KN +     E F +    G+  + ++ N L+  L K  + E+   +
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    +  +  ++N +L   CKAG + KA+DI++ M S G  P +VTY  LI G CK
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G++  A  + + +   GI      +N +I    + +    A+++F EM     A  
Sbjct: 594 A---GRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPD 650

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VTY  +  GLC   G + EAV    EM+  G  P   +   L  G     +V     L 
Sbjct: 651 AVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLI 710

Query: 353 DDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           D + E+   S + +   T+I  + K  + +DA A    +LD
Sbjct: 711 DMVMEKAKFSDNEV---TMIRGFLKISKYQDALATLGGILD 748



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 34/286 (11%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL---INGLCVDGKLDEA 313
           P+   F  ++    K     A   + +EM    I+  V+  +SL   I      G  +E 
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMK---ISLSVIDNDSLLVFIESYASFGLYNEI 143

Query: 314 VALRDEMMAS-GLKPNVVTSNALINGFC---KKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +   D M    G+  N    N L+N      K KLVE A     ++  +G+ P V T+N 
Sbjct: 144 LQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAH---SNMVSRGIRPDVSTFNI 200

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI A C+  ++  A  +   M D G+LPD  T+  ++ G   EGN++G   +  ++V  G
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                VT N+LV   CK+G+ ++A+  ++EM    +E  +P+  T+N+L+ G  + G ++
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEM--SLREGFFPDKYTFNMLVNGLSKTGHVK 318

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            A       LE            V + M+ +GF PDI  +   ISG
Sbjct: 319 HA-------LE------------VMDMMLREGFDPDIYTYNSLISG 345


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 263/507 (51%), Gaps = 21/507 (4%)

Query: 24  LKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIR 83
           L +  P+++I  + N  + P   L +F  + ++     ++ L   ++H LV +K     R
Sbjct: 25  LSSLTPDSLITTVLNCRS-PWKALEFFNAAPEK-----NIQLYSAIIHVLVGSKLLSHAR 78

Query: 84  SFLHMFVKN-----GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
             L+  V+N       + +    F  LS    S    ++  +++++      K  L  EA
Sbjct: 79  YLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVL----CKMELVEEA 134

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
                  G   ++ +CN LL  LVK G+FE +  +Y+EM    +  ++ +F  +++G C+
Sbjct: 135 LSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCR 194

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L +A ++ ++M+  G+ P V+ Y ILI G C      K+ +A+++ + M E G+ PN
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD---NKIEEAESMHRAMREVGVYPN 251

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+NTL+DG+CK  N   A++++++M   G+   VVT+  LI+GLC  G++  A  L  
Sbjct: 252 VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFV 311

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+   + PN+   N+LI+ +CK   V +A  LF ++    +SP V TY+ LI   C   
Sbjct: 312 NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R E+A  +   M   G+L +  TYN LI G  +EG ++    I +++  NG+   ++T++
Sbjct: 372 RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFS 431

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   CK    + A+ +  EM     +   P++VTY  +I G C+ G +++A  L +++
Sbjct: 432 TLIDGYCKIRNLQAAMGIYSEMV---IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPD 525
           L+ G+ PN  T   + + + + G I D
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISD 515



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 240/465 (51%), Gaps = 15/465 (3%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           + H +  A         L++ VK G+F  +  I+  +   S+ L  + I    L+    +
Sbjct: 137 MYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEM--ISNGLSPSVITFGTLIDGCCR 194

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                   E F      G+  +V+    L+R L  + K E+ E +++ M+   +  N+ +
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT 254

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +++G CK     +A  + +DM   G+ P VVT+ ILIDG CK    G+M  A  +F 
Sbjct: 255 YNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCK---FGEMKAARNLFV 311

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M++  + PN   +N+LID +CK  ++S AM +F E+    ++  V TY+ LI GLC   
Sbjct: 312 NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           + +EA  + ++M   G+  N VT N+LI+G CK+  ++KA  +   ++E G+ P+VIT++
Sbjct: 372 RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFS 431

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YCK   ++ A  + + M+ + + PDV TY  +I G  + G+++    + +++++N
Sbjct: 432 TLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN 491

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK----------KWPNIVTYNVL 478
           G+     T + L+  LCKDGK   A+ L  E  + +  +             N V Y  L
Sbjct: 492 GITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTAL 551

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           I G CQ G+   A  L +++   GL P++  Y ++   + +  +I
Sbjct: 552 IHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 18/139 (12%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDS------------FN 190
           D G+  +  + + LL  L K+GK  D +E   ++++ +    N+D+            + 
Sbjct: 490 DNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYT 549

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++GLC+ G+ +KA  +  DM+  G+ P  V Y +++ G  +   I  M  A     DM
Sbjct: 550 ALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHA-----DM 604

Query: 251 VENGILPNEVTFNTLIDGF 269
           ++ G++PN      L + +
Sbjct: 605 LKFGVIPNSAVHVILCECY 623


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 232/417 (55%), Gaps = 24/417 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +  + G  ++ ++ N L+  L K+   E    + +EM  +  E +  ++N +L+GL
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK--DMVENG 254
           C+ GK+++A    + M S G SP VV YN L+D   K+G + + +    +FK  DM +  
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAW---GLFKTMDMADRK 182

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ +T+NTLIDGFC+ E    AMK+F+++ + G     VTYNS++ GL     +DEA 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  +M+ SG  PN  T + +++G C+   + +   L+++++E+  SP V+  N +ID  
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  +++DA  +   M   G +PDV TYN L+ GL +   V+    + + +V+NG    +
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y++++  LCK  K   A  L D M    + K  P++VT+N+L+ G C+ GKL++A  L
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMI---ERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 495 LNELLEKGLIP--------------NQTTYQIVR--EEMMEKGFIPDIEGHMYNISG 535
           L+ + E  ++P              ++ T + VR  + M+EKG + D+  H   ++G
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 219/378 (57%), Gaps = 26/378 (6%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  +  E ++ +++ +++GLCK GK+ +A +++E+M   GV+P V TY I++D  C+   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRA-- 58

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            GK+ +AD +F  M+E G   N V +N LI+G CKDENI  A K+ EEM S G     +T
Sbjct: 59  -GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD--D 354
           YN++++GLC  GK+ EA    D M + G  P+VV  N L++   K+  V +A  LF   D
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++++ ++P +ITYNTLID +C+  + ++A  +   ++ +G +PD  TYN ++ GL+R+ N
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIV 473
           ++    +  ++V++G      TY+I++   C+ G   + + L +EM     EK++ P+++
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM----TEKRFSPDVL 293

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EM 517
             N +I   C+  K++DA+ +L E+ + G +P+  TY I+ +                 M
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 518 MEKGFIPDIEGHMYNISG 535
           ++ G  PDI  +   ++G
Sbjct: 354 VDNGCAPDIVSYSVVLNG 371



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 227/469 (48%), Gaps = 62/469 (13%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++  N+I+  +  +  V   K     + F      G    V++ N LL AL KEGK  +
Sbjct: 114 DNITYNTILSGLCRMGKVSEAK-----QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAE 168

Query: 170 VEYVYK--EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
              ++K  +M  R++  +L ++N +++G C+  K ++A  + +D+ + G  P  VTYN +
Sbjct: 169 AWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSI 228

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF------------------------- 262
           + G  +K     M +A+ +FK MV++G  PN  T+                         
Sbjct: 229 LLGLARKSN---MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285

Query: 263 ----------NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
                     N +ID  CK + +  A KV EEM   G    VVTYN L++GLC    +D+
Sbjct: 286 KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDK 345

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M+ +G  P++V+ + ++NG CK   V  ARVLFD + E+ L P V+T+N L+D
Sbjct: 346 AHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD 405

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK G++++A  + + M +  VLPD  T   L+ GL R+   +    +   +V  G  A
Sbjct: 406 GLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVA 465

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++ +NI++  LC++GK  +A+     M K + E   P++VTY  L+    + G+++ A 
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS-PDVVTYTTLVNALIEAGRVDQAV 524

Query: 493 GLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
               ++   G  P+   Y                  + + M EKGF+ D
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 213/399 (53%), Gaps = 24/399 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V++ + ++  L K GK  +   + +EM  + +  ++ ++  +++ LC+AGK+++A
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M   G S   V YN LI+G CK   I + YK   + ++M   G  P+ +T+NT+
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYK---LLEEMASKGYEPDNITYNTI 121

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G C+   +S A + F+ M S G +  VV YN L++ L  +GK+ EA  L   M  +  
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 326 K--PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           K  P+++T N LI+GFC+ +  ++A  LF D+  +G  P  +TYN+++    ++  M++A
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   M+D G  P+ +TY+ +++G  R GN+     +  E+        ++  N ++  
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  K   A  +L+EM K+      P++VTYN+L+ G C+   ++ A+ L + +++ G 
Sbjct: 302 LCKAKKVDDAHKVLEEMSKI---GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 504 IPNQTTYQIVR----------------EEMMEKGFIPDI 526
            P+  +Y +V                 + M+E+  +PD+
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDV 397



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L    K GK      +F  +      +  + I  + L+  + +  K     + FK    
Sbjct: 156 LLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA 215

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G     ++ N +L  L ++   ++ E ++K+M       N  +++ VL+G C+ G + +
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             ++ E+M     SP V+  N +ID  CK   +   +K   V ++M + G +P+ VT+N 
Sbjct: 276 CLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK---VLEEMSKIGAVPDVVTYNI 332

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+DG CK   +  A ++F  M  +G A  +V+Y+ ++NGLC   K+ +A  L D M+   
Sbjct: 333 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 392

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L P+VVT N L++G CK   +++A+ L D +SE  + P  +T  TL+   C++ R ++A 
Sbjct: 393 LVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--MRAGLVTYNILVG 442
            +   M+++G + DV  +N ++AGL REG +         +V +       +VTY  LV 
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVN 512

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           AL + G+  +AV   D   +M      P+ V YN L+ G  ++G+   A+ L   + EKG
Sbjct: 513 ALIEAGRVDQAV---DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569

Query: 503 LIPN 506
            + +
Sbjct: 570 FLSD 573


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 35/393 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F      G+   +L+ N+L+  L K+G  ++ E ++ ++ +R +  NL +FN  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------- 237
           GLC+ G +++A+ ++E + S G++P V++YN LI G+CK   +                 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          G M  AD + +D +  G +P+E T+++LI+G C D +++ AM VF
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            E    G    ++ YN+L+ GL   G + +A+ L  +MM  G  P++ T N ++NG CK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +  A  + +D   +G  P + T+NTLID YCK+  M+ A  + ++ML  G+ PDV TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N L+ GL +   ++ V +    ++  G    ++TYNIL+ + CKD K  +A+ L  E   
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE--- 556

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           M+     P+IVT   LI G C  G+L+ A  L 
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 223/451 (49%), Gaps = 23/451 (5%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           +GKF ++  +   +    DS     + I  +M  Y +  K       F+R   Y  + SV
Sbjct: 53  HGKFEAMEDVLAEMRKNVDSKMLEGVYIG-IMRDYGRKGKVQEAVNVFERMDFYDCEPSV 111

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S N ++  LV+ G F     VY  MK   I  ++ +    +   C  G+   A  ++ +
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G     V+Y  +I G+ K+    + Y    +F +M++ GI P+ +TFN LI   CK
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYH---LFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  + K+F ++   G+   + T+N  I GLC  G +DEA  L + +++ GL P+V++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI GFCK   + +A      +   G+ P+  TYNT+I+ +CK G M++A  +    +
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G +PD  TY+ LI GL  +G++     +  E +  G +  ++ YN LV  L K G   
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L+ +M    +    P+I TYN+++ G C+ G L DANG+LN+ + KG IP+  T+ 
Sbjct: 409 QALQLMKDMM---EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 512 I----------------VREEMMEKGFIPDI 526
                            + + M+  G  PD+
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 199/372 (53%), Gaps = 6/372 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++R   ++GK ++   V++ M     E ++ S+N ++N L + G  ++A  +   MK +G
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P V T+ I +  +C     G+   A  +  +M   G   N V++  +I GF K+    
Sbjct: 142 IYPDVYTHTIRMKSFCI---TGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F+EM   GI   ++T+N LI+ LC  G + E+  L  ++M  G+ PN+ T N  I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G C+K  +++A  L + I  +GL+P VI+YNTLI  +CK  ++ +A    + M++ GV 
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN +I G  + G ++    I+ + +  G      TY+ L+  LC DG   +A+++
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
             E   MEK  K  +I+ YN L+KG  ++G +  A  L+ +++E G  P+  TY +V   
Sbjct: 379 FYE--AMEKGFKH-SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 517 MMEKGFIPDIEG 528
           + + G + D  G
Sbjct: 436 LCKMGCLSDANG 447



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 199/439 (45%), Gaps = 50/439 (11%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTC---SDSLCRNSIII 119
             RLL S+V     P + S+  +   F K+ K        H +       +    N+II 
Sbjct: 270 AARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                  ++N    L    FK     G      + + L+  L  +G       V+ E   
Sbjct: 330 GFCKAGMMQNADKILRDAMFK-----GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +  + ++  +N ++ GL K G + +A  +M+DM   G SP + TYN++++G CK G +  
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A+ +  D +  G +P+  TFNTLIDG+CK  N+  A+++ + M SHGI   V+TYN+
Sbjct: 445 ---ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+NGLC   KLD  V     M+  G  PN++T N LI  FCK + V +A  LF ++  +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 360 LSPSVIT------------------------------------YNTLIDAYCKEGRMEDA 383
           L+P ++T                                    +N +I+A+C++  +  A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PD  TY  +I    + GN++     + E ++ G+     T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 444 LCKDGKSKKAVSLLDEMFK 462
           LC   +  +AV +++ M +
Sbjct: 682 LCVTHRLSEAVVIINLMVQ 700



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 162/329 (49%), Gaps = 39/329 (11%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F  A + G K S++  N L++ L K+G       + K+M       ++ ++N V+NGLC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK----------------------- 234
           K G L+ A+ I+ D  + G  P + T+N LIDGYCK+                       
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 235 ------GGIGKMYKADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
                  G+ K  K D V   FK M+E G  PN +T+N LI+ FCKD  +S AM++F+EM
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEA----VALRDEMMASGLKPNVVTSNALINGFCK 341
            + G+   +VT  +LI GLC +G+LD+A    V +  E   S    +    N +IN FC+
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY---STAIFNIMINAFCE 614

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           K  V  A  LF  +     +P   TY  +ID+YCK G ++ A       + +G++P  +T
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGM 430
              ++  L     +     I+N +V NG+
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGI 703



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 23/327 (7%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G    + TY  +I+     G    M    A  +  V++ +L  E  +  ++  + +   +
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML--EGVYIGIMRDYGRKGKV 92

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ VFE M  +     V +YN+++N L   G   +A  +   M   G+ P+V T    
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +  FC       A  L +++  QG   + ++Y  +I  + KE    +A+ + + ML +G+
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PD+ T+N LI  L ++GNV+    + ++++  G+   L T+NI +  LC+ G   +A  
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----- 510
           LL+ +     E   P++++YN LI GFC+  KL +A   L++++  G+ PN+ TY     
Sbjct: 273 LLESIVS---EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 511 ------------QIVREEMMEKGFIPD 525
                       +I+R+ M  KGFIPD
Sbjct: 330 GFCKAGMMQNADKILRDAMF-KGFIPD 355



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 4/259 (1%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            + L+  Y K        E       +G+   V++ N LL  L K  K ++V   +K M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +    N+ ++N ++   CK  K+++A ++ ++MK+ G++P +VT   LI G C  G + 
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K Y+     +   E     +   FN +I+ FC+  N+S A K+F +MG    A    TY 
Sbjct: 584 KAYELFVTIEK--EYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +I+  C  G +D A     E ++ GL P+  T   ++N  C    + +A V+ + + + 
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 359 GLSPSVITYNTLIDAYCKE 377
           G+ P  +  N++ +A  KE
Sbjct: 702 GIVPEEV--NSIFEADKKE 718


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 120/334 (35%), Positives = 199/334 (59%), Gaps = 6/334 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++ GLCK G L  A ++M +M+  G  P V+TY ILID +CK+G   ++ +A  V 
Sbjct: 16  TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG---RLEEARNVL 72

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M   G+  N V +N LI   CKDE +  A+ +F +M S G    + T+NSLI GLC  
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K +EA+ L  +M+  G+  N +T N LI+ F ++  +++A  L +D+  +G     ITY
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI A C+ G +E   A+   M+ +G+ P+  + N LI GL R GN++     + ++++
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   +VTYN L+  LCK G++++A++L D   K++ E   P+ +TYN LI   C++G 
Sbjct: 253 RGLTPDIVTYNSLINGLCKTGRAQEALNLFD---KLQVEGICPDAITYNTLISWHCKEGM 309

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +DA+ LL+  ++ G IPN+ T+ I+    +++G
Sbjct: 310 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/316 (36%), Positives = 175/316 (55%), Gaps = 6/316 (1%)

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           E M S+G  P + TYN LI G CKKG    +  A  +  +M   G  PN +T+  LID F
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKG---YLVSARELMNEMQIKGCEPNVITYTILIDRF 59

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  +  A  V +EM   G+A   V YN LI+ LC D K+ +A+ +  +M + G KP++
Sbjct: 60  CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 119

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N+LI G CK    E+A  L+ D+  +G+  + ITYNTLI A+ + G M++A  + N 
Sbjct: 120 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 179

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML RG   D  TYN LI  L R GN+E    +  ++++ G+    ++ NIL+  LC+ G 
Sbjct: 180 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 239

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            + A+  L +M         P+IVTYN LI G C+ G+ ++A  L ++L  +G+ P+  T
Sbjct: 240 IQHALEFLRDMIH---RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 296

Query: 510 YQIVREEMMEKGFIPD 525
           Y  +     ++G   D
Sbjct: 297 YNTLISWHCKEGMFDD 312



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 172/306 (56%), Gaps = 3/306 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V++   L+    KEG+ E+   V  EM  + + LN   +N +++ LCK  K+  A
Sbjct: 44  GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 103

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  DM S G  P + T+N LI G CK   + K  +A  +++DM+  G++ N +T+NTL
Sbjct: 104 LNMFGDMSSKGCKPDIFTFNSLIFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNTL 160

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F +   +  A+K+  +M   G     +TYN LI  LC  G +++ +AL ++MM+ GL
Sbjct: 161 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 220

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN ++ N LING C+   ++ A     D+  +GL+P ++TYN+LI+  CK GR ++A  
Sbjct: 221 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 280

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + +   G+ PD  TYN LI+   +EG  +    +++  V++G     VT+ ILV    
Sbjct: 281 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 340

Query: 446 KDGKSK 451
           K+G  +
Sbjct: 341 KEGDQE 346



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 180/344 (52%), Gaps = 6/344 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    + + N L+  L K+G       +  EM+ +  E N+ ++  +++  CK G+L +A
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++++M   G++   V YN LI   CK     K+  A  +F DM   G  P+  TFN+L
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKD---EKVQDALNMFGDMSSKGCKPDIFTFNSL 125

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK      A+ ++++M   G+ A  +TYN+LI+     G + EA+ L ++M+  G 
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + +T N LI   C+   +EK   LF+D+  +GL+P+ I+ N LI+  C+ G ++ A  
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+ RG+ PD+ TYN LI GL + G  +   N+ ++L   G+    +TYN L+   C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           K+G    A  LL    +       PN VT+ +L+  F ++G  E
Sbjct: 306 KEGMFDDAHLLLS---RGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 123/226 (54%), Gaps = 19/226 (8%)

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + + M++ G  P++ T N LI G CKK  +  AR L +++  +G  P+VITY  LID +C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           KEGR+E+A  + + M  +G+  +   YNCLI+ L ++  V+   N+  ++ + G +  + 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T+N L+  LCK  K ++A+ L  +M     E    N +TYN LI  F ++G +++A  L+
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDML---LEGVIANTITYNTLIHAFLRRGAMQEALKLV 177

Query: 496 NELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPD 525
           N++L +G   +  TY                  + E+MM KG  P+
Sbjct: 178 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 223



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 15/194 (7%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM----LMLAYVKNMKPHLGFEAF 139
           + +H F++ G          AL   +D L R   + D+    L+ A  +      G   F
Sbjct: 159 TLIHAFLRRGAMQ------EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 212

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           +     GL  + +SCN L+  L + G  +      ++M  R +  ++ ++N ++NGLCK 
Sbjct: 213 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 272

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY-KADAVFKDMVENGILPN 258
           G+  +A ++ + ++  G+ P  +TYN LI  +CK+G    M+  A  +    V++G +PN
Sbjct: 273 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG----MFDDAHLLLSRGVDSGFIPN 328

Query: 259 EVTFNTLIDGFCKD 272
           EVT+  L+  F K+
Sbjct: 329 EVTWYILVSNFIKE 342



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           P+I TYN LI G C+KG L  A  L+NE+  KG  PN  TY I+ +   ++G + +    
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 530 MYNISG 535
           +  +SG
Sbjct: 72  LDEMSG 77


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 209/376 (55%), Gaps = 20/376 (5%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  VL+   L+  L +EG+  +   +   M    ++ +  ++   ++G+CK G    A +
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 208 IMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++  M+ +  + P VV Y+ +IDG CK G   +   +  +F +M + GI PN VT+N +I
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDG---RHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC     SAA ++ +EM    I+  VVTYN+LIN    +GK  EA  L DEM+  G+ 
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T N++I+GFCK+  ++ A  +F  ++ +G SP V T+ TLID YC   R++D   +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  RG++ +  TYN LI G    G++    ++  +++++G+   +VT N L+  LC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLEDANGL 494
           +GK K A+    EMFK  ++ K             P+++TYN+LI G   +GK  +A  L
Sbjct: 476 NGKLKDAL----EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 495 LNELLEKGLIPNQTTY 510
             E+  +G++P+  TY
Sbjct: 532 YEEMPHRGIVPDTITY 547



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 218/406 (53%), Gaps = 33/406 (8%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V+  + ++  L K+G+  D   ++ EM+ + I  N+ ++N ++ G C +G+ + A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++++M    +SP VVTYN LI+ + K+   GK ++A  ++ +M+  GI+PN +T+N++I
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKE---GKFFEAAELYDEMLPRGIIPNTITYNSMI 365

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK + + AA  +F  M + G +  V T+ +LI+G C   ++D+ + L  EM   GL 
Sbjct: 366 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 425

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF-- 384
            N VT N LI+GFC    +  A  L   +   G+ P ++T NTL+D  C  G+++DA   
Sbjct: 426 ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485

Query: 385 --AMRNSMLD-------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             AM+ S +D        GV PDV TYN LI GL  EG       +  E+ + G+    +
Sbjct: 486 FKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY+ ++  LCK  +  +A  +      M  +   PN+VT+N LI G+C+ G+++D   L 
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMF---VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 496 NELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            E+  +G++ +   Y                  + +EM+  G  PD
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 17/408 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +I   ++    K+ +       F    D G+  ++++ N ++      G++   + + 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R+I  N+ ++N ++N   K GK  +A+++ ++M   G+ P  +TYN +IDG+CK+
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A+ +F  M   G  P+  TF TLIDG+C  + I   M++  EM   G+ A  
Sbjct: 372 ---DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LI+G C+ G L+ A+ L  +M++SG+ P++VT N L++G C    ++ A  +F  
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 355 ISEQ-----------GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           + +            G+ P V+TYN LI     EG+  +A  +   M  RG++PD  TY+
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I GL ++  ++    +   + +      +VT+N L+   CK G+    + L  E   M
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE---M 605

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            +     + + Y  LI GF + G +  A  +  E++  G+ P+  T +
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 653



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 208/406 (51%), Gaps = 34/406 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV+  N+L+ A+V+  + + V  +Y++M+R++I  ++ SF  ++   C   KL  A    
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------GKMY 241
             +  LG+ P VVT+  L+ G C    +                            G++ 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVV 199

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG--SHGIAAGVVTYNS 299
           +A A+   MVENG+ P+++T+ T +DG CK  +  +A+ +  +M   SH I   VV Y++
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSA 258

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+GLC DG+  ++  L  EM   G+ PN+VT N +I GFC       A+ L  ++ E+ 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           +SP+V+TYN LI+A+ KEG+  +A  + + ML RG++P+  TYN +I G  ++  ++   
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++   +   G    + T+  L+   C   +    + LL EM    +     N VTYN LI
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM---PRRGLVANTVTYNTLI 435

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            GFC  G L  A  L  +++  G+ P+  T   + + + + G + D
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 198/363 (54%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ N L+ A VKEGKF +   +Y EM  R I  N  ++N +++G CK  +L+ A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+   M + G SP V T+  LIDGYC   G  ++     +  +M   G++ N VT+NTLI
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYC---GAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GFC   +++AA+ + ++M S G+   +VT N+L++GLC +GKL +A+ +   M  S   
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V+T N LI G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M  SM  +   P+V T+N LI G  + G V+    +  E+   G+ A  +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  L+    K G    A+ +  EM        +P+ +T   ++ GF  K +LE A  +L
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMI---SSGVYPDTITIRNMLTGFWSKEELERAVAML 672

Query: 496 NEL 498
            +L
Sbjct: 673 EDL 675



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 183/345 (53%), Gaps = 11/345 (3%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            ED   ++ +M R R   ++  FN ++  + +  + +    + + M+   +   + ++ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI  +C      K+  A + F  + + G+ P+ VTF TL+ G C D  +S A+ +F ++ 
Sbjct: 122 LIKCFCS---CSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
                  V+T+ +L+NGLC +G++ EAVAL D M+ +GL+P+ +T    ++G CK     
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 347 KARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            A  L   + E   + P+V+ Y+ +ID  CK+GR  D+  +   M D+G+ P++ TYNC+
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G    G     + ++ E++   +   +VTYN L+ A  K+GK  +A  L DEM     
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML---P 351

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
               PN +TYN +I GFC++ +L+ A  +   +  KG  P+  T+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 155/297 (52%), Gaps = 24/297 (8%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F DM+ +  LP+ + FN L+    + E     + ++++M    I   + ++  LI   C
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              KL  A++   ++   GL P+VVT   L++G C    V +A  LF  I      P V+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVL 183

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+ TL++  C+EGR+ +A A+ + M++ G+ PD  TY   + G+ + G+     N++ ++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 426 VN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
              + ++  +V Y+ ++  LCKDG+   + +L  E   M+ +  +PNIVTYN +I GFC 
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE---MQDKGIFPNIVTYNCMIGGFCI 300

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQ-----IVRE-----------EMMEKGFIPD 525
            G+   A  LL E+LE+ + PN  TY       V+E           EM+ +G IP+
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 22/265 (8%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ +F +M        V+ +N L+  +    + D  ++L  +M    ++ ++ +   LI 
Sbjct: 65  AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            FC    +  A   F  +++ GL P V+T+ TL+   C + R+ +A  + + +      P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRP 180

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV T+  L+ GL REG V     +++ +V NG++   +TY   V  +CK G +  A++LL
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY------- 510
            +M ++   K  PN+V Y+ +I G C+ G+  D++ L  E+ +KG+ PN  TY       
Sbjct: 241 RKMEEISHIK--PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 511 ---------QIVREEMMEKGFIPDI 526
                    Q + +EM+E+   P++
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNV 323



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 122/218 (55%), Gaps = 6/218 (2%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D LC N  + D L + +    K  +  +A       G++  VL+ N L+  L+ EG
Sbjct: 467 NTLLDGLCDNGKLKDALEM-FKAMQKSKMDLDASHPFN--GVEPDVLTYNILICGLINEG 523

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           KF + E +Y+EM  R I  +  +++ +++GLCK  +L++A+ +   M S   SP VVT+N
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI+GYCK G +    +   +F +M   GI+ + + + TLI GF K  NI+ A+ +F+EM
Sbjct: 584 TLINGYCKAGRVDDGLE---LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            S G+    +T  +++ G     +L+ AVA+ +++  S
Sbjct: 641 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 251/470 (53%), Gaps = 24/470 (5%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVK---NGKFTSVS-TIFHALSTCSDSLCRNSIIID 120
           L   ++H L  AK Y K R  +   ++   N + + +  ++F+ LS    S    ++   
Sbjct: 72  LYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVF-G 130

Query: 121 MLMLAYVKNMKPHLGF--EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +L++A+ +     +G   EA        +  ++ +CN +L  LVK+G+F+ +  VY +M 
Sbjct: 131 VLIIAFSE-----MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R    N+ ++  +++G C+ G   KA  + ++M    + P VV Y ILI G C   G  
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC---GES 242

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A+++F+ M  +G+LPN  T+NT++DG+CK  ++  A+++++EM   G+   VVT+ 
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFG 302

Query: 299 SLINGLCVDGKLDEAVALRD---EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            LI+GLC   K DE V+ R    +M + G+ PN+   N LI+G+CK   + +A  L  +I
Sbjct: 303 ILIDGLC---KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +  + P V TY+ LI   C   RME+A  +   M  +G LP+  TYN LI G  +EGN+
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    + +++   G+   ++T++ L+   CK GK + A+ L  EM     +   P++V Y
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV---IKGLLPDVVAY 476

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             LI G  + G  ++A  L  E+ E GL PN  T   + + + + G I D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 196/346 (56%), Gaps = 6/346 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++   L+    ++G F     ++ EM  ++I   +  +  ++ GLC   ++++A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M++ G+ P + TYN ++DGYCK   I  + KA  ++++M+ +G+LPN VTF  L
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCK---IAHVKKALELYQEMLGDGLLPNVVTFGIL 304

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK + + +A K   +M S G+   +  YN LI+G C  G L EA++L  E+    +
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T + LI G C    +E+A  L  ++ ++G  P+ +TYNTLID YCKEG ME A  
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M ++G+ P++ T++ LI G  + G +E    +  E+V  G+   +V Y  L+    
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           KDG +K+A  L  E   M++    PN+ T + LI G C+ G++ DA
Sbjct: 485 KDGNTKEAFRLHKE---MQEAGLHPNVFTLSCLIDGLCKDGRISDA 527



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 182/323 (56%), Gaps = 3/323 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F    +  +  +V+    L+R L  E +  + E +++ M+   +  NL ++N +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK   + KA ++ ++M   G+ P VVT+ ILIDG CK     +M  A     DM   G
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTD---EMVSARKFLIDMASFG 328

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           ++PN   +N LIDG+CK  N+S A+ +  E+  H I   V TY+ LI GLC   +++EA 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM   G  PN VT N LI+G+CK+  +EKA  +   ++E+G+ P++IT++TLID Y
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G+ME A  +   M+ +G+LPDV  Y  LI G  ++GN +    +  E+   G+   +
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 435 VTYNILVGALCKDGKSKKAVSLL 457
            T + L+  LCKDG+   A+ L 
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLF 531



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 184/337 (54%), Gaps = 22/337 (6%)

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           + V P +   N+++DG  KKG    M+K   V+ DMV  G  PN VT+ TLIDG C+  +
Sbjct: 152 MDVLPAMQACNMVLDGLVKKGRFDTMWK---VYGDMVARGASPNVVTYGTLIDGCCRQGD 208

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A ++F+EM    I   VV Y  LI GLC + ++ EA ++   M  SG+ PN+ T N 
Sbjct: 209 FLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++G+CK   V+KA  L+ ++   GL P+V+T+  LID  CK   M  A      M   G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V+P++  YNCLI G  + GN+    ++ +E+  + +   + TY+IL+  LC   + ++A 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL E   M+K+   PN VTYN LI G+C++G +E A  + +++ EKG+ PN  T+  + 
Sbjct: 389 GLLQE---MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445

Query: 515 E----------------EMMEKGFIPDIEGHMYNISG 535
           +                EM+ KG +PD+  +   I G
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 161/392 (41%), Gaps = 33/392 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+  Y K        E   +  + G++ ++++ + L+    K GK E    +Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +  ++ ++  +++G  K G   +A  + ++M+  G+ P V T + LIDG CK 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G I     +DA+   + + G        N L       +  S A+ +F  +    I    
Sbjct: 522 GRI-----SDAIKLFLAKTGTDTTGSKTNELDRSL--YQMCSLALSLFRGISEPCICVIR 574

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT            KL          + + LKP    SN  +  + +     K  + F  
Sbjct: 575 VT------------KLFATNNQPKAHLHTHLKPP--KSNQTLKRYLQSSNTSKVLLFFRI 620

Query: 355 ISEQGLSPSVITYNTL---IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +  +  +PS I   +L   + A   +  + +   M   +++ G  P +     LI+  S 
Sbjct: 621 LLRK--NPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSA 678

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            GNV    N+ +E+ +      L+++  ++ A   + +  KA+ L  +   M+ +   P+
Sbjct: 679 TGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQ---MQMDDVQPD 731

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           IVT  V +      G L+    +   +  +GL
Sbjct: 732 IVTVTVALSACADLGALDMGEWIHAYIRHRGL 763



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 139/329 (42%), Gaps = 26/329 (7%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN--FVLNGLCKAGKLNKASDIMEDM 212
           NQ L+  ++      V   ++ + R+    ++DSF+  F L        L +   +   +
Sbjct: 599 NQTLKRYLQSSNTSKVLLFFRILLRKNPS-SIDSFSLMFALKACTLKSSLVEGKQMHALV 657

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            + G  P +     LI  Y   G +     ADA   +M +     N +++ ++I  +  +
Sbjct: 658 INFGFEPIIFLQTSLISMYSATGNV-----ADA--HNMFDEIPSKNLISWTSVISAYVDN 710

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-GKLDEAVALRDEMMASGLKPNVVT 331
           +  + A+++F +M    +   +VT    ++  C D G LD    +   +   GL  ++  
Sbjct: 711 QRPNKALQLFRQMQMDDVQPDIVTVTVALSA-CADLGALDMGEWIHAYIRHRGLDTDLCL 769

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
           +N+LIN + K   +  AR          + P+ +T+  ++ A    G +E+      SM 
Sbjct: 770 NNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMK 823

Query: 392 -DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            D  + P +S + C++  L R G +      + ++    +R   V +  L+GA    G  
Sbjct: 824 EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMW 880

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            K + + +++    K+++ P   +  V I
Sbjct: 881 DKKMLVRNQI----KQRRDPGCSSIEVGI 905



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/250 (19%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++G +  +     L+      G   D   ++ E+  +    NL S+  V++      + N
Sbjct: 659 NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPN 714

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +   M+   V P +VT  + +   C    +G +   + +   +   G+  +    N
Sbjct: 715 KALQLFRQMQMDDVQPDIVTVTVALSA-C--ADLGALDMGEWIHAYIRHRGLDTDLCLNN 771

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI+ + K   I  A +    + +     GV+   S   GL  +GK       R      
Sbjct: 772 SLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSH-AGLVEEGKQH----FRSMKEDY 826

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L+P +     +++  C+  L+ +A   ++ I +  + P+ + + TL+ A   +G  +  
Sbjct: 827 SLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLLGACSLQGMWDKK 883

Query: 384 FAMRNSMLDR 393
             +RN +  R
Sbjct: 884 MLVRNQIKQR 893


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 214/388 (55%), Gaps = 6/388 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             F  F +    G     ++   L + L  +G+ +     + ++       +  S+  ++
Sbjct: 138 FAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCK G+   A D+++ +    V P VV YN +ID  CK   + + +    +F +MV  
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD---LFSEMVSK 254

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+ VT++ LI GFC    +  A+ +F +M    I   V T+N L+N  C DGK+ E 
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             + D MM  G+KPN VT N+L++G+C  K V KA+ +F+ +++ G++P + +Y+ +I+ 
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CK  + ++A  +   M  + ++PDV TY+ LI GLS+ G +     +++++ + G+   
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TYN ++ ALCK  +  KA++LL    K + +   P+I TY++LIKG CQ GKLEDA  
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLT---KFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  +LL KG   +   Y I+ +    +G
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEG 519



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 212/376 (56%), Gaps = 8/376 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+      + + +    ++ N+  +N +++ +CK   +N+A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M S G+SP VVTY+ LI G+C    +GK+  A  +F  M+   I P+  TFN L
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCI---LGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++ FCKD  +     VF+ M   GI    VTYNSL++G C+  ++++A ++ + M   G+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ + + +INGFCK K  ++A  LF ++  + + P V+TY++LID   K GR+  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRGV P++ TYN ++  L +   V+    ++ +  + G +  + TY+IL+  LC
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLC 481

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           + GK + A  + +++      K +  ++  Y ++I+GFC +G   +A  LL+++ + G I
Sbjct: 482 QSGKLEDARKVFEDLL----VKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537

Query: 505 PNQTTYQIVREEMMEK 520
           P+  TY+I+   + +K
Sbjct: 538 PDAKTYEIIILSLFKK 553



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 200/357 (56%), Gaps = 6/357 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           ++ +V+  N ++ ++ K     +   ++ EM  + I  ++ +++ +++G C  GKL  A 
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+   M    + P V T+NIL++ +CK G   KM +   VF  M++ GI PN VT+N+L+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDG---KMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+C  + ++ A  +F  M   G+   + +Y+ +ING C   K DEA+ L  EM    + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+VVT ++LI+G  K   +  A  L D + ++G+ P++ TYN+++DA CK  +++ A A+
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
                D+G  PD+STY+ LI GL + G +E  R +  +L+  G    +  Y I++   C 
Sbjct: 458 LTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV 517

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +G   +A++LL    KME     P+  TY ++I    +K + + A  LL E++ +GL
Sbjct: 518 EGLFNEALALLS---KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 3/264 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N +++++    F  + ++  A+ +F  +           +N ++  L         + L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G+KPN+V  N LIN FC+  L+  A  +F  I + G  P  IT+ TL    C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+++ AF   + ++  G   D  +Y  LI GL + G      +++  +  N ++  +V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++ ++CK     +A  L  EM     +   P++VTY+ LI GFC  GKL+DA  L N+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMV---SKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           ++ + + P+  T+ I+     + G
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDG 309



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 3/190 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK      +   V++ + L+  L K G+      +  +M  R +  N+ ++N +L+ LCK
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK 447

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             +++KA  ++   K  G  P + TY+ILI G C+ G   K+  A  VF+D++  G   +
Sbjct: 448 THQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG---KLEDARKVFEDLLVKGYNLD 504

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              +  +I GFC +   + A+ +  +M  +G      TY  +I  L    + D A  L  
Sbjct: 505 VYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 564

Query: 319 EMMASGLKPN 328
           EM+A GL  N
Sbjct: 565 EMIARGLPLN 574



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 20/220 (9%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV-----KNMK 131
           P I+S+  M   F K  KF     +F  +        R +II D++  + +     K+ +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMH-------RKNIIPDVVTYSSLIDGLSKSGR 415

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
                +   +  D G+  ++ + N +L AL K  + +    +  + K +  + ++ +++ 
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++ GLC++GKL  A  + ED+   G +  V  Y I+I G+C +G      +A A+   M 
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN---EALALLSKME 532

Query: 252 ENGILPNEVTFNTLI-DGFCKDENISAAMKVFEEMGSHGI 290
           +NG +P+  T+  +I   F KDEN   A K+  EM + G+
Sbjct: 533 DNGCIPDAKTYEIIILSLFKKDEN-DMAEKLLREMIARGL 571



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 38/223 (17%)

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           S  K N ++ ++    F     V+ A  LF+ +  +  +P    +N ++ +  K      
Sbjct: 44  SSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHT 103

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLI-----------------------------------A 407
              +   M  RG+ P++   N LI                                    
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK 163

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL  +G ++      +++V  G     ++Y  L+  LCK G+++ A+ LL    +++   
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ---RVDGNL 220

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             PN+V YN +I   C+   + +A  L +E++ KG+ P+  TY
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTY 263


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/437 (33%), Positives = 216/437 (49%), Gaps = 54/437 (12%)

Query: 132 PHLG---FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY--VYKEMKRRRIELNL 186
           PHL      +F+R G   ++ S+ + N +L AL +           V++ +   R+  N 
Sbjct: 153 PHLAAQLLHSFRRRGH--VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +FN +++  C  G L  A   +  M+  G+SP VVTYN L+  +C+KG +G   +A  +
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLG---EARTL 267

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              M + GI P   T+NTL+  + +   I  A  V E M + G    + TYN L  GLC 
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 307 DGKLDEAVALRD------------------------------------EMMASGLKPNVV 330
            GK+DEA  L+D                                    EM   G+K ++V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N ++ G C++  +E+A      ++E+GL+P VITYNTLIDAYCK   +  AF + + M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +  G+  D  T N L+  L +E   E    ++      G     V+Y  ++ A  K+ K 
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A+ L DE   M K K  P+I TYN LIKG C  GKL +A   LNEL++KGL+P+ TTY
Sbjct: 508 EPALYLWDE---MSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTY 564

Query: 511 QIV-----REEMMEKGF 522
            I+     +E  +EK F
Sbjct: 565 NIIIHAYCKEGDLEKAF 581



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 201/367 (54%), Gaps = 9/367 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL   V++ N LL+A  ++G   +   +   MK+  I     ++N +++   + G + +
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTF 262
           A++++E M + G  P + TYN+L  G C+ G + + +K     KD +E+   + P+ VT+
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFK----LKDEMEHLSIVSPDVVTY 354

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTL+D   K +  S A+ + EEM   G+ + +VT+N ++ GLC +G+L+EA+     M  
Sbjct: 355 NTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTE 414

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL P+V+T N LI+ +CK + V KA VL D++   GL     T NTL+   CKE R E+
Sbjct: 415 EGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 474

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  S   RG +PD  +Y  ++A   +E   E    + +E+    +   + TYN L+ 
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC  GK  +A+  L+E+    K+   P+  TYN++I  +C++G LE A    N++LE  
Sbjct: 535 GLCTIGKLTEAIDKLNELM---KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591

Query: 503 LIPNQTT 509
             P+  T
Sbjct: 592 FKPDVVT 598



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 241/496 (48%), Gaps = 55/496 (11%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDM 121
           +  SL+  + +P   +F   +H     G      T+  ALST S      L  + +  + 
Sbjct: 197 VFRSLIALRLHPNHYTFNLLVHTHCSKG------TLADALSTLSTMQGFGLSPDVVTYNT 250

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ A+ +            R    G+  +  + N L+ A  + G  +    V + M    
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILID----------- 229
            E +L ++N +  GLC+AGK+++A  + ++M+ L  VSP VVTYN L+D           
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370

Query: 230 ------------------------GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
                                   G C++G   ++ +A    K M E G+ P+ +T+NTL
Sbjct: 371 LNLLEEMRDKGVKSSLVTHNIVVKGLCREG---QLEEALGRLKMMTEEGLAPDVITYNTL 427

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +CK  N++ A  + +EM   G+     T N+L+  LC + + +EA  L       G 
Sbjct: 428 IDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGF 487

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ V+   ++  + K+   E A  L+D++S++ L+PS+ TYNTLI   C  G++ +A  
Sbjct: 488 VPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAID 547

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             N ++ +G++PD +TYN +I    +EG++E      N+++ N  +  +VT N L+  LC
Sbjct: 548 KLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLC 607

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             GK +KA+ L +     EK KK  +++TYN LI+  C+ G ++ A     ++  +GL P
Sbjct: 608 LHGKLEKAIKLFESW--AEKGKKV-DVITYNTLIQALCKDGDVDTALHFFADMEARGLQP 664

Query: 506 NQTTYQIVREEMMEKG 521
           +  TY +V   + E G
Sbjct: 665 DAFTYNVVLSALSEAG 680



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 217/441 (49%), Gaps = 77/441 (17%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ A  K  +  D   + +EM+ + ++ +L + N V+ GLC+ G+L +A   ++
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMY----------------------------- 241
            M   G++P V+TYN LID YCK   + K +                             
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 242 ---KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              +A+ + +   + G +P+EV++ T++  + K+     A+ +++EM    +   + TYN
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGL--------------------------------- 325
           +LI GLC  GKL EA+   +E+M  GL                                 
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN 590

Query: 326 --KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KP+VVT N L+NG C    +EKA  LF+  +E+G    VITYNTLI A CK+G ++ A
Sbjct: 591 YFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTA 650

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M  RG+ PD  TYN +++ LS  G  E  +N++++L  +G  +   +Y  L+ +
Sbjct: 651 LHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP-LIKS 709

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEK----KWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
             ++ K+ K     D   K + E     K  +  +YN  +K  C  G+L++A  +L+E++
Sbjct: 710 SAEEVKTGK-----DPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMM 764

Query: 500 EKGLIPNQTTYQIVREEMMEK 520
           +KG+  + +TY  + E ++++
Sbjct: 765 QKGMSVDSSTYITLMEGLIKR 785



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 9/380 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           + L  + I  + L+ AY K       F         GLK    + N LL  L KE ++E+
Sbjct: 415 EGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 474

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E + +   +R    +  S+  V+    K  K   A  + ++M    ++P + TYN LI 
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C    IGK+ +A     ++++ G++P++ T+N +I  +CK+ ++  A +   +M  + 
Sbjct: 535 GLCT---IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               VVT N+L+NGLC+ GKL++A+ L +     G K +V+T N LI   CK   V+ A 
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTAL 651

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             F D+  +GL P   TYN ++ A  + GR E+A  M + + + G L +  +Y  LI   
Sbjct: 652 HFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP-LIKSS 710

Query: 410 SREGNVEGVRNIMNELVNNGMRAG--LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           + E        + ++  + G   G    +YN  V  LC  G+ K+A ++LDEM  M+K  
Sbjct: 711 AEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEM--MQKGM 768

Query: 468 KWPNIVTYNVLIKGFCQKGK 487
              +  TY  L++G  ++ K
Sbjct: 769 SV-DSSTYITLMEGLIKRQK 787



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 205 ASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           A+ ++   +  G V P +   N ++    +          D VF+ ++   + PN  TFN
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLD-VFRSLIALRLHPNHYTFN 214

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+   C    ++ A+     M   G++  VVTYN+L+   C  G L EA  L   M   
Sbjct: 215 LLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKE 274

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P   T N L++ + +   +++A  + + ++  G  P + TYN L    C+ G++++A
Sbjct: 275 GIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 334

Query: 384 FAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           F +++ M    ++ PDV TYN L+    +        N++ E+ + G+++ LVT+NI+V 
Sbjct: 335 FKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVK 394

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC++G+ ++A   L  +  M +E   P+++TYN LI  +C+   +  A  L++E++  G
Sbjct: 395 GLCREGQLEEA---LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 503 L-----IPNQTTYQIVREEMME-----------KGFIPD 525
           L       N   Y + +E+  E           +GF+PD
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPD 490


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 35/393 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F      G+   +L+ N+L+  L K+G  ++ E ++ ++ +R +  NL +FN  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------- 237
           GLC+ G +++A+ ++E + S G++P V++YN LI G+CK   +                 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          G M  AD + +D +  G +P+E T+++LI+G C D +++ AM VF
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            E    G    ++ YN+L+ GL   G + +A+ L  +MM  G  P++ T N ++NG CK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +  A  + +D   +G  P + T+NTLID YCK+  M+ A  + ++ML  G+ PDV TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N L+ GL +   ++ V +    ++  G    ++TYNIL+ + CKD K  +A+ L  E   
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE--- 556

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           M+     P+IVT   LI G C  G+L+ A  L 
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 223/451 (49%), Gaps = 23/451 (5%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           +GKF ++  +   +    DS     + I  +M  Y +  K       F+R   Y  + SV
Sbjct: 53  HGKFEAMEDVLAEMRKNVDSKMLEGVYIG-IMRDYGRKGKVQEAVNVFERMDFYDCEPSV 111

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S N ++  LV+ G F     VY  MK   I  ++ +    +   C  G+   A  ++ +
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G     V+Y  +I G+ K+    + Y    +F +M++ GI P+ +TFN LI   CK
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYH---LFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  + K+F ++   G+   + T+N  I GLC  G +DEA  L + +++ GL P+V++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI GFCK   + +A      +   G+ P+  TYNT+I+ +CK G M++A  +    +
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G +PD  TY+ LI GL  +G++     +  E +  G +  ++ YN LV  L K G   
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L+ +M    +    P+I TYN+++ G C+ G L DANG+LN+ + KG IP+  T+ 
Sbjct: 409 QALQLMKDMM---EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 512 I----------------VREEMMEKGFIPDI 526
                            + + M+  G  PD+
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 199/372 (53%), Gaps = 6/372 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++R   ++GK ++   V++ M     E ++ S+N ++N L + G  ++A  +   MK +G
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P V T+ I +  +C     G+   A  +  +M   G   N V++  +I GF K+    
Sbjct: 142 IYPDVYTHTIRMKSFCI---TGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F+EM   GI   ++T+N LI+ LC  G + E+  L  ++M  G+ PN+ T N  I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G C+K  +++A  L + I  +GL+P VI+YNTLI  +CK  ++ +A    + M++ GV 
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN +I G  + G ++    I+ + +  G      TY+ L+  LC DG   +A+++
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
             E   MEK  K  +I+ YN L+KG  ++G +  A  L+ +++E G  P+  TY +V   
Sbjct: 379 FYE--AMEKGFKH-SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 517 MMEKGFIPDIEG 528
           + + G + D  G
Sbjct: 436 LCKMGCLSDANG 447



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 198/439 (45%), Gaps = 50/439 (11%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCS---DSLCRNSIII 119
             RLL S+V     P + S+  +   F K+ K        H +       +    N+II 
Sbjct: 270 AARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                  ++N    L    FK     G      + + L+  L  +G       V+ E   
Sbjct: 330 GFCKAGMMQNADKILRDAMFK-----GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +  + ++  +N ++ GL K G + +A  +M+DM   G SP + TYN++++G CK G +  
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A+ +  D +  G +P+  TFNTLIDG+CK  N+  A+++ + M SHGI   V+TYN+
Sbjct: 445 ---ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+NGLC   KLD  V     M+  G  PN++T N LI  FCK + V +A  LF ++  +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 360 LSPSVIT------------------------------------YNTLIDAYCKEGRMEDA 383
           L+P ++T                                    +N +I+A+C +  +  A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMA 621

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PD  TY  +I    + GN++     + E ++ G+     T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 444 LCKDGKSKKAVSLLDEMFK 462
           LC   +  +AV +++ M +
Sbjct: 682 LCVTHRLSEAVVIINLMVQ 700



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 161/328 (49%), Gaps = 39/328 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A + G K S++  N L++ L K+G       + K+M       ++ ++N V+NGLCK
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK------------------------ 234
            G L+ A+ I+ D  + G  P + T+N LIDGYCK+                        
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 235 -----GGIGKMYKADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                 G+ K  K D V   FK M+E G  PN +T+N LI+ FCKD  +S AM++F+EM 
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA----VALRDEMMASGLKPNVVTSNALINGFCKK 342
           + G+   +VT  +LI GLC +G+LD+A    V +  E   S    +    N +IN FC K
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCXK 615

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V  A  LF  +     +P   TY  +ID+YCK G ++ A       + +G++P  +T 
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGM 430
             ++  L     +     I+N +V NG+
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGI 703



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 23/327 (7%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G    + TY  +I+     G    M    A  +  V++ +L  E  +  ++  + +   +
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML--EGVYIGIMRDYGRKGKV 92

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ VFE M  +     V +YN+++N L   G   +A  +   M   G+ P+V T    
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +  FC       A  L +++  QG   + ++Y  +I  + KE    +A+ + + ML +G+
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PD+ T+N LI  L ++GNV+    + ++++  G+   L T+NI +  LC+ G   +A  
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----- 510
           LL+ +     E   P++++YN LI GFC+  KL +A   L++++  G+ PN+ TY     
Sbjct: 273 LLESIVS---EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 511 ------------QIVREEMMEKGFIPD 525
                       +I+R+ M  KGFIPD
Sbjct: 330 GFCKAGMMQNADKILRDAMF-KGFIPD 355



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 4/259 (1%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            + L+  Y K        E       +G+   V++ N LL  L K  K ++V   +K M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +    N+ ++N ++   CK  K+++A ++ ++MK+ G++P +VT   LI G C  G + 
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K Y+     +   E     +   FN +I+ FC   N+S A K+F +MG    A    TY 
Sbjct: 584 KAYELFVTIEK--EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +I+  C  G +D A     E ++ GL P+  T   ++N  C    + +A V+ + + + 
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 359 GLSPSVITYNTLIDAYCKE 377
           G+ P  +  N++ +A  KE
Sbjct: 702 GIVPEEV--NSIFEADKKE 718


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/425 (32%), Positives = 222/425 (52%), Gaps = 34/425 (8%)

Query: 121 MLMLAYVKNMKPHL-GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           +L+ A V   +PH      + R     L     S + LL +L     F     ++ ++ R
Sbjct: 55  LLLTASVAG-RPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAF----VLFADIFR 109

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
            R+ L+  +FN +L  LC AGK  +A +++  M S    P  VTYN +I G+C +G   +
Sbjct: 110 LRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARG---R 162

Query: 240 MYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTY 297
           +     + ++M E  GI P++ T+ T+I G+CK   +  A KVF+EM + G +    V Y
Sbjct: 163 VQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMY 222

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+LI G C  G L+ A+  R EM+  G+   V T N  ++    +    +A  L +++ E
Sbjct: 223 NALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE 282

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +GL+P   TYN LI+ YCKEG+ + A  M   M+ +G+   V TY  LI  LS +G V+ 
Sbjct: 283 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQE 342

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              + N+ V  G+R  L  YN L+ + C  G   +A  ++ EM   EK++  P+ VTYN 
Sbjct: 343 TDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM---EKKRITPDDVTYNT 399

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           L++G C  G+L++A GL+ E+ ++G+ P+  +Y                  VR+EMM KG
Sbjct: 400 LMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKG 459

Query: 522 FIPDI 526
           F P +
Sbjct: 460 FNPTL 464



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 219/427 (51%), Gaps = 28/427 (6%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           + ++ P   F  F       L  S  + N +LR L   GK   V  +  E+ R+    N 
Sbjct: 92  LSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGK--PVRAL--ELLRQMPSPNA 147

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADA 245
            ++N V+ G C  G++    +IM +M+  G ++P   TY  +I G+CK   +GK+  A  
Sbjct: 148 VTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCK---VGKVEDATK 204

Query: 246 VFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           VF +M+  G + PN V +N LI G+C   N+  A++   EM   G++  V TYN  ++ L
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            ++G+  EA AL +EM   GL P+  T N LING+CK+   +KA  +F+ +  +G+  +V
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY +LI A   +G +++   + N  + RG+ PD+  YN LI      G+++    IM E
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +    VTYN L+  LC  G+  +A  L++EM    K    P++V+YN LI G+  
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEM---TKRGIQPDLVSYNTLISGYSM 441

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEG 528
           KG ++DA  + +E++ KG  P   TY                + + +EM+  G  PD   
Sbjct: 442 KGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501

Query: 529 HMYNISG 535
           ++  I G
Sbjct: 502 YISLIEG 508



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 192/370 (51%), Gaps = 37/370 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKASDI 208
           + ++ N ++      G+ +    + +EM+ R  I  +  ++  V++G CK GK+  A+ +
Sbjct: 146 NAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKV 205

Query: 209 MEDMKSLG-VSPKVVTYNILIDGYCKKGGI------------------------------ 237
            ++M + G V P  V YN LI GYC +G +                              
Sbjct: 206 FDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLF 265

Query: 238 --GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
             G+  +A A+ ++M E G+ P+  T+N LI+G+CK+     AMK+FE M   GI A VV
Sbjct: 266 MEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVV 325

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY SLI+ L + G + E   L ++ +  G++P++   NALIN  C    +++A  +  ++
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            ++ ++P  +TYNTL+   C  GR+++A  +   M  RG+ PD+ +YN LI+G S +G++
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDI 445

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    + +E++  G    L+TYN ++  LC +G+   A  L+ EM         P+  TY
Sbjct: 446 KDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMV---GNGITPDDSTY 502

Query: 476 NVLIKGFCQK 485
             LI+G   +
Sbjct: 503 ISLIEGLTTE 512



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 166/324 (51%), Gaps = 4/324 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K GK    + +F  + T    +  N+++ + L+  Y       +         D G+ 
Sbjct: 193 WCKVGKVEDATKVFDEMLT-EGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVS 251

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V + N  +  L  EG+  +   + +EM  + +  +  ++N ++NG CK GK  KA  +
Sbjct: 252 MTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKM 311

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E M   G+   VVTY  LI     KG +    + D +F D V  GI P+   +N LI+ 
Sbjct: 312 FEVMVGKGIRATVVTYTSLIHALSMKGMV---QETDRLFNDAVRRGIRPDLFMYNALINS 368

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C   ++  A ++  EM    I    VTYN+L+ GLC+ G+LDEA  L +EM   G++P+
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +V+ N LI+G+  K  ++ A  + D++  +G +P+++TYN +I   C  G+  DA  +  
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488

Query: 389 SMLDRGVLPDVSTYNCLIAGLSRE 412
            M+  G+ PD STY  LI GL+ E
Sbjct: 489 EMVGNGITPDDSTYISLIEGLTTE 512



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 4/128 (3%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ N L+R L   G+ ++   + +EM +R I+ +L S+N +++G    G +  A  + ++
Sbjct: 395 VTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDE 454

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF-C 270
           M   G +P ++TYN +I G C  G  G    A+ + K+MV NGI P++ T+ +LI+G   
Sbjct: 455 MMGKGFNPTLLTYNAMIKGLCLNGQGGD---AEDLVKEMVGNGITPDDSTYISLIEGLTT 511

Query: 271 KDENISAA 278
           +DE ++A 
Sbjct: 512 EDERLAAG 519


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 246/478 (51%), Gaps = 33/478 (6%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKN---GKFTSVSTIFHALSTCSDSLCR--NSIIIDMLM 123
           ++H L+      +++S L   + N     F +VS++   L+      C   +S++ + ++
Sbjct: 31  IVHYLLKFNLKSEVQSLLLQILSNRISSPFFTVSSLLENLTEPISIPCPKISSLLYESII 90

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             Y+++    L    F +  D GL       N LL +LVK   FE + +V+ E+K + IE
Sbjct: 91  SVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVKGK-IE 149

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L++ ++  ++ G C+AG   K  +++ D++ +G+SP VV Y  LIDG CK G + +   A
Sbjct: 150 LDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRR---A 206

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +F  M E  ++ N+ T+  LI+GF K        ++FE+M   G+   + TYN +IN 
Sbjct: 207 KLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINE 266

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD---------- 353
            C +GKL +A  L DEM   G+  NVVT N LI+G C+K  + +A  L D          
Sbjct: 267 FCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNG 326

Query: 354 -----------DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                      ++ E+G+SPS +TY  L +A+ + G ME AF   +SM   G++PDV  Y
Sbjct: 327 GNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIY 386

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ GL  +GN++    +   +    +    V YN ++   CK G S +A+  L EM  
Sbjct: 387 GVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEM-- 444

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            E ++  PN+ +Y+  I   C+ GK ++A  LLN++   GL P+ + Y I+ +    K
Sbjct: 445 -EDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIISKAKYSK 501



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 154/333 (46%), Gaps = 41/333 (12%)

Query: 219 PKV--VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           PK+  + Y  +I  Y + G I     A   F  MV+ G++     FNTL+D   K +   
Sbjct: 79  PKISSLLYESIISVYIQSGSIEL---AVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFE 135

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
               VF E+    I   V TY  +I G C  G   +   L  ++   GL PNVV    LI
Sbjct: 136 KLWFVFNEVKGK-IELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLI 194

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   V +A++LF+ + E  L  +  TY  LI+ + K+G  +D F +   M   GV 
Sbjct: 195 DGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVF 254

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TYNC+I     EG +     + +E+   G+ + +VTYN L+  LC+  +  +A  L
Sbjct: 255 PNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKL 314

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
           +D+M +                  G+   G   D   L+ E+ E+G+ P++ TY I    
Sbjct: 315 VDQMKR-----------------AGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNA 357

Query: 513 -VREEMMEKGF-----------IPDIEGHMYNI 533
            VR   MEK F           +PD+  H+Y +
Sbjct: 358 HVRLGDMEKAFHFYSSMEKVGLVPDV--HIYGV 388



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 27/309 (8%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           KNG       +F+ +   +  L  N     +L+  + K      GFE F++    G+  +
Sbjct: 199 KNGDVRRAKLLFNKMGEVN--LVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPN 256

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA----- 205
           + + N ++     EGK      ++ EM +R +  N+ ++N +++GLC+  ++ +A     
Sbjct: 257 LYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVD 316

Query: 206 ----------------SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
                           +D++ +M+  G+SP  VTY IL + + +   +G M KA   +  
Sbjct: 317 QMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVR---LGDMEKAFHFYSS 373

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M + G++P+   +  L+ G C   N+  A K+F  M    +    V YN++ING C  G 
Sbjct: 374 MEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGN 433

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
              A+    EM    L PNV + ++ I   CK    ++A +L + +   GL PSV  YN 
Sbjct: 434 SFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNI 493

Query: 370 LIDA-YCKE 377
           +  A Y KE
Sbjct: 494 ISKAKYSKE 502



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 24/236 (10%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE---------------------GKFED 169
           K H  +E F      G+ S+V++ N L+  L ++                     G + D
Sbjct: 272 KLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVD 331

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  + +EM+ R I  +  ++  + N   + G + KA      M+ +G+ P V  Y +L+ 
Sbjct: 332 VTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLH 391

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C KG    M +A  +F+ M E  + PNEV +NT+I+G+CK  N   A++  +EM    
Sbjct: 392 GLCVKGN---MKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKR 448

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
           +   V +Y+S I  LC DGK  EA  L ++M  SGL+P+V   N +      K+L+
Sbjct: 449 LVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIISKAKYSKELL 504


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 231/437 (52%), Gaps = 41/437 (9%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++++K H     F+         S++  N+LL A+VK  K++ V  + K+M+   I  +L
Sbjct: 61  LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +FN V+N  C   +++ A  ++  M  LG  P  VT   L++G+C++    ++  A ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRN---RVSDAVSL 177

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              MVE G  P+ V +N +ID  CK   ++ A+  F+E+G  GI   VVTY +L+NGLC 
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCN 237

Query: 307 DGKL-DEAVALRD----------------------------------EMMASGLKPNVVT 331
            G+  D A  LRD                                  EM+   + P++VT
Sbjct: 238 SGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            ++LING C    +++A  +FD +  +G  P V++YNTLI+ +CK  R+ED   +   M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG++ +  TYN LI G  + G+V+  +   +++ + G+   + TYNIL+G LC +G  +
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE 417

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           KA+ + ++M K E +    +IVTY  +I+G C+ GK+EDA GL   L  KGL P+  TY 
Sbjct: 418 KALVIFEDMQKSEMD---LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYT 474

Query: 512 IVREEMMEKGFIPDIEG 528
            +   +  KG   ++E 
Sbjct: 475 TMMSGLCTKGLQHEVEA 491



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 238/477 (49%), Gaps = 25/477 (5%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
           L   +V  + +P I  F   L   VK  K+  V ++   +      + L   +I+I+   
Sbjct: 72  LFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             +    +  L      +    G +   ++   L+    +  +  D   +  +M      
Sbjct: 132 CCF----QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ ++N +++ LCK  ++N A D  +++   G+ P VVTY  L++G C  G   +   A
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG---RWNDA 244

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + +DM++  I PN +T++ L+D F K+  +  A ++FEEM    I   +VTY+SLING
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  ++DEA  + D M++ G  P+VV+ N LINGFCK K VE    LF  +S++GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TYNTLI  + + G ++ A    + M   GV PD+ TYN L+ GL   G +E    I  
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  + M   +VTY  ++  +CK GK + A  L      +  +   P+IVTY  ++ G C
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF---CSLSLKGLKPDIVTYTTMMSGLC 481

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI------VREEMMEK----GFIPDIEGHM 530
            KG   +   L  ++ ++GL+ N +   +      +  E+++K    G+ P + G +
Sbjct: 482 TKGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDITISAELIKKMLSCGYAPSLLGDI 538



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 19/281 (6%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +D  +  A+ +F EM        +V +N L++ +    K D  ++L  +M   G++ ++ 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +IN FC    V  A  +   + + G  P  +T  +L++ +C+  R+ DA ++ + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G  PD+  YN +I  L +   V    +   E+   G+R  +VTY  LV  LC  G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL +M    K K  PN++TY+ L+  F + GK+ +A  +  E++   + P+  TY
Sbjct: 242 NDAARLLRDMI---KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 511 QIV----------------REEMMEKGFIPDIEGHMYNISG 535
             +                 + M+ KG  PD+  +   I+G
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 248/477 (51%), Gaps = 25/477 (5%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN----SI 117
           S+   G++L SLV +  Y  + S LH  ++    TS   I   L  C   L +N    S+
Sbjct: 71  SIFQFGKILGSLVKSNHYSTVVS-LHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 118 IIDMLMLAYVKNM--------------KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           +  +L + Y  N+              + H   +   +    G   + +S   L+  L K
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+      + + +  + ++ N+  +N +++ +CK   +N+A D+  +M S G+SP VVT
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LI G+C    +GKM  A  +F  M+   I PN  TFN L+DGFCK+  +  A  V  
Sbjct: 250 YNALISGFCI---VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLA 306

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M   GI   V TYNSL++  C+  ++++A  + + +   G+ PN+ + + +I+GFCK K
Sbjct: 307 MMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIK 366

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            V++A  LF ++    + P V+TYN+LID  CK G++  A  + + M DRGV  D  TYN
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYN 426

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            ++  L +   V+    ++ ++ + G++  + TY  LV  LCK+G+ + A  + +++   
Sbjct: 427 SILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL-- 484

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             +    ++  Y  +I+GFC  G  +++  LL+++ E G IPN  TY+I+   + +K
Sbjct: 485 -VKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDK 540



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 24/370 (6%)

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           E N+ +   ++ GLC  G++++A    + + +LG     V+Y  LI+G CK   +G+   
Sbjct: 139 EPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK---VGQTSA 195

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  + + +    + PN V +NT+ID  CK + ++ A  ++ EM S GI+  VVTYN+LI+
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C+ GK+ +A  L ++M+   + PNV T N L++GFCK++ +++A+ +   + +QG+ P
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V TYN+L+D YC    +  A  + N++  RGV P++ +Y+ +I G  +   V+   N+ 
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKG 481
            E+  N +   +VTYN L+  LCK GK   A+ L+DEM     ++  P + +TYN ++  
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM----HDRGVPHDKITYNSILDA 431

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
            C+  +++ A  LL ++ ++G+ P+  TY                +IV E+++ KG+I D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 526 IEGHMYNISG 535
           +  +   I G
Sbjct: 492 VNIYTAMIQG 501



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 182/326 (55%), Gaps = 3/326 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ +      G+   V++ N L+      GK +D   ++ +M    I  N+ +FN +++
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK  +L +A +++  M   G+ P V TYN L+D YC    + ++ KA  +F  + + G
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL---VKEVNKAKHIFNTISQRG 347

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN  +++ +I GFCK + +  AM +F+EM  + I   VVTYNSLI+GLC  GK+  A+
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L DEM   G+  + +T N++++  CK   V+KA  L   + ++G+ P + TY TL+D  
Sbjct: 408 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR+EDA  +   +L +G + DV+ Y  +I G    G  +   ++++++  NG     
Sbjct: 468 CKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEM 460
           VTY I++ +L    ++ KA  LL EM
Sbjct: 528 VTYEIIICSLFDKDENDKAEKLLREM 553



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 132/254 (51%), Gaps = 3/254 (1%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+   F  ++    K  + S  + +  +M  +GI + +V  + LIN     G+   + ++
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G +PNV+T   LI G C K  + +A    D +   G   + ++Y TLI+  CK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G+   A  +   +  + V P+V  YN +I  + +   V    ++ +E+V+ G+   +VT
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   C  GK K A  L +   KM  E   PN+ T+N+L+ GFC++ +L++A  +L 
Sbjct: 250 YNALISGFCIVGKMKDATDLFN---KMIFENINPNVYTFNILVDGFCKERRLKEAKNVLA 306

Query: 497 ELLEKGLIPNQTTY 510
            ++++G+ P+  TY
Sbjct: 307 MMMKQGIKPDVFTY 320



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 48/249 (19%)

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP++     ++    K         L   +   G++  ++  + LI+ + + G+   +F+
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   +L  G  P+V T   LI GL  +G +       +++V  G     V+Y  L+  LC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 446 KDGKSKKAVSLL-------------------DEMFK-------------MEKEKKWPNIV 473
           K G++  A+ LL                   D M K             M  +   P++V
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEM 517
           TYN LI GFC  GK++DA  L N+++ + + PN  T+ I                V   M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 518 MEKGFIPDI 526
           M++G  PD+
Sbjct: 309 MKQGIKPDV 317


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 219/398 (55%), Gaps = 33/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  L K+G+  D   ++ EM+ + I  ++ ++N ++NG C +G+ + A  ++++M  
Sbjct: 257 NTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLE 316

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             ++P VVT++ LI+ + K+G   K ++A+ ++ +M+   I+P+ VT++++IDGFCK   
Sbjct: 317 RKINPDVVTFSALINAFVKEG---KFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + AA  +F    + G +  ++T+N+LI G C   ++D+ + L  EM  +GL  N +T   
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF----AMRNSM 390
           LI+GFC+   +  A+ L  ++   G+ P+V+T NTL+D  C  G+++DA     AM+ S 
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 391 LD-------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           +D        GV PDV TYN LI GL  EG       +  E+ + G+    +TY+ ++  
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK  +  +A  + D    M  +   P++VT+N LI G+C+ G ++D   L  E+ ++G+
Sbjct: 554 LCKQSRLDEATQMFD---SMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
           + +  TY                  + +EM+  G  PD
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 221/441 (50%), Gaps = 53/441 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+    +LM  +    K       F +    G   +V++ N LL  L  E +  +   ++
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M +     N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK 
Sbjct: 175 HQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 235 GGI---------------------------------GKMYKADAVFKDMVENGILPNEVT 261
           G                                   G+   A  +F +M E  I P+ VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N +I+GFC     S A ++ +EM    I   VVT+++LIN    +GK  EA  L DEM+
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + P+ VT +++I+GFCK+  ++ A  +F     +G SP +IT+NTLI  YC+  R++
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           D   + + M + G++ +  TY  LI G  + G++   ++++ E++++G+   +VT N L+
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKW------------PNIVTYNVLIKGFCQKGKLE 489
             LC +GK K A+    EMFK  ++ K             P++ TYN+LI G   +GK  
Sbjct: 471 DGLCDNGKLKDAL----EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L  E+  +G++P+  TY
Sbjct: 527 EAEELYEEMPHRGIVPDTITY 547



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 216/438 (49%), Gaps = 44/438 (10%)

Query: 128 KNMKPHLGFEAFKRAGD------YGLKS----SVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           +++K   GF   K   D      Y ++S    SV+   +L+  +V+ G+ + V  ++K+M
Sbjct: 48  ESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKM 107

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           +  R+  N  SF  ++   C   KL  A      +  LG  P VVT+N L+ G C +  I
Sbjct: 108 EMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRI 167

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       G++ +A A+   M+E+G+ PN++T+ T++DG 
Sbjct: 168 SEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 270 CKDENISAAMKVFEEMG--SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           CK  +  +A+ +  +M   SH I   VV YN++I+GL  DG+  +A  L  EM    + P
Sbjct: 228 CKMGDTVSALNLLRKMEEVSH-IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++VT N +INGFC       A  L  ++ E+ ++P V+T++ LI+A+ KEG+  +A  + 
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELY 346

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + ML R ++P   TY+ +I G  ++  ++   ++       G    ++T+N L+   C+ 
Sbjct: 347 DEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRA 406

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            +    + LL E   M +     N +TY  LI GFCQ G L  A  LL E++  G+ PN 
Sbjct: 407 KRVDDGIKLLHE---MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463

Query: 508 TTYQIVREEMMEKGFIPD 525
            T   + + + + G + D
Sbjct: 464 VTCNTLLDGLCDNGKLKD 481



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 196/363 (53%), Gaps = 17/363 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ + L+ A VKEGKF + E +Y EM  R I  +  +++ +++G CK  +L+ A 
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +     + G SP ++T+N LI GYC+   +    K   +  +M E G++ N +T+ TLI
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK---LLHEMTEAGLVANTITYTTLI 435

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            GFC+  +++AA  + +EM S G+   VVT N+L++GLC +GKL +A+ +   M  S   
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G++P+V T N LI G   +    +A  L++++  +G+ P  ITY+++ID  C
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+ R+++A  M +SM  +   PDV T+N LI G  + G V+    +  E+   G+ A  +
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAI 615

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+    K      A+ +  EM        +P+ +T   ++ G   K +LE A  +L
Sbjct: 616 TYITLIYGFRKVDNIDGALDIFQEMI---SSGVYPDTITIRNMLTGLWSKEELERAVAML 672

Query: 496 NEL 498
            +L
Sbjct: 673 EDL 675



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 19/270 (7%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LLH +  A       ++   +H F + G   +   +   +   S  +C N +  + L+ 
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM--ISSGVCPNVVTCNTLLD 471

Query: 125 AYVKNMKPHLGFEAFKRAGDY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYV 173
               N K     E FK                G++  V + N L+  L+ EGKF + E +
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y+EM  R I  +  +++ +++GLCK  +L++A+ + + M S   SP VVT+N LI GYCK
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G +    +   +F +M + GI+ + +T+ TLI GF K +NI  A+ +F+EM S G+   
Sbjct: 592 AGMVDDGLE---LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +T  +++ GL    +L+ AVA+ +++  S
Sbjct: 649 TITIRNMLTGLWSKEELERAVAMLEDLQMS 678


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 6/375 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+ +    + +    + ++ ++  +N +++G+CK   +N A
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 352

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +  S  + P V TYN LI G+C    +GK+  A  +F  M    I+P+  TF+ L
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCI---VGKLKDAIDLFNKMTSKNIIPDVYTFSIL 409

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DGFCKD NI  A  V   M    I   VVTY+SL++G C+  ++++A ++ + M   G+
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 469

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             NV + N +INGFCK K+V++A  LF ++  + + P VITY++LID  CK GR+  A  
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALE 529

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  RG  PD+ TYN ++  L ++ +V+    ++ +L   G+R  + TY ILV  LC
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC 589

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + GK + A  + +++          ++  Y V+I+GFC KG  ++A  LL+++ E G IP
Sbjct: 590 QSGKLEDARKVFEDLLVKGYN---LDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 646

Query: 506 NQTTYQIVREEMMEK 520
           +  TY+I+   + EK
Sbjct: 647 DAKTYEIIILSLFEK 661



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 202/370 (54%), Gaps = 6/370 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +R     ++  V+  N ++  + K+    D   +Y E   +RI  ++ ++N +++
Sbjct: 317 ALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALIS 376

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  GKL  A D+   M S  + P V T++IL+DG+CK G I +   A  V   M++  
Sbjct: 377 GFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE---AKNVLAMMMKQS 433

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ VT+++L+DG+C    ++ A  +F  M   G+ A V +YN +ING C    +DEA+
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + P+V+T ++LI+G CK   +  A  L D++  +G  P +ITYN+++DA 
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+  ++ A  +   +  +G+ PD++TY  L+ GL + G +E  R +  +L+  G    +
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y +++   C  G   +A++LL    KME+    P+  TY ++I    +K + + A  L
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLS---KMEENGCIPDAKTYEIIILSLFEKDENDMAEKL 670

Query: 495 LNELLEKGLI 504
           L E++ +GL+
Sbjct: 671 LREMIMRGLL 680



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 205/380 (53%), Gaps = 6/380 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++    ++    +G+     + + ++      L+  S+  ++NGLCK G+   A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++       V P VV YN +IDG CK   +   +    ++ + V   I P+  T+N L
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFD---LYSEKVSKRIFPDVFTYNAL 374

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFC    +  A+ +F +M S  I   V T++ L++G C DG + EA  +   MM   +
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI 434

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+VVT ++L++G+C    V KA  +F+ +S +G++ +V +YN +I+ +CK   +++A  
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + + PDV TY+ LI GL + G +     +++E+   G +  ++TYN ++ ALC
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K     KA++LL    K++ +   P++ TY +L+KG CQ GKLEDA  +  +LL KG   
Sbjct: 555 KKHHVDKAITLLT---KLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 506 NQTTYQIVREEMMEKGFIPD 525
           +   Y ++ +   +KG   +
Sbjct: 612 DVYAYTVMIQGFCDKGLFDE 631



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 164/300 (54%), Gaps = 3/300 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F +     +   V + + L+    K+G  ++ + V   M ++ I+ ++ +++ +++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C   ++NKA  I   M   GV+  V +YNI+I+G+CK   I  + +A  +FK+M    
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCK---IKMVDEAMKLFKEMHHKQ 503

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ +T+++LIDG CK   IS A+++ +EM   G    ++TYNS+++ LC    +D+A+
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  ++   G++P++ T   L+ G C+   +E AR +F+D+  +G +  V  Y  +I  +
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C +G  ++A A+ + M + G +PD  TY  +I  L  +   +    ++ E++  G+   L
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 199/413 (48%), Gaps = 48/413 (11%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM------ 209
           ++L +LVK   +  V  + ++M+ + I+LN  + N ++N  C+ G +  A  ++      
Sbjct: 115 KILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLTRGVYW 174

Query: 210 -------------EDMKSLGVSPKVV---------------------TYNILID---GYC 232
                        ED K L     ++                     ++ ILI+    + 
Sbjct: 175 IEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFI 234

Query: 233 KKGGIGKMYKADAVFK--DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           K+  + K ++    +    +++NG  P+ +T  T I GFC    I  A+   +++ + G 
Sbjct: 235 KQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGF 294

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               V+Y +LINGLC  G+   A+ L        ++P+VV  N +I+G CK K V  A  
Sbjct: 295 HLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFD 354

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L+ +   + + P V TYN LI  +C  G+++DA  + N M  + ++PDV T++ L+ G  
Sbjct: 355 LYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC 414

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           ++GN++  +N++  ++   ++  +VTY+ L+   C   +  KA S+ +    M       
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNT---MSHRGVTA 471

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           N+ +YN++I GFC+   +++A  L  E+  K + P+  TY  + + + + G I
Sbjct: 472 NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 3/171 (1%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I + G  P  IT  T I  +C +G++  A    + ++  G   D  +Y  LI GL + G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +    ++       ++  +V YN ++  +CKD     A  L  E  K+ K + +P++ T
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE--KVSK-RIFPDVFT 370

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           YN LI GFC  GKL+DA  L N++  K +IP+  T+ I+ +   + G I +
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 220/425 (51%), Gaps = 44/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFED---VEYVYKEMKRRRIELNLDSFNFVLNG 195
            +R  + G   +V+S N LL+    E + E+   + ++  + + R    NL S+N V+NG
Sbjct: 154 LRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
               G+++KA ++  DM   G+ P VVTY I+IDG CK   + +   A+ VF+ M++ G+
Sbjct: 214 FFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDR---AEGVFQQMIDKGV 270

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VT+  LI G+         +++ +EM +HG+     TY  L++ LC  GK  EA  
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 316 LRDEMMASGLKPNVVTSNALING-----------------------------------FC 340
           L D M+  G+KP+V     +++G                                   F 
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           KK ++ +A  +F+ + +QGLSP+V+ Y TLIDA CK GR++DA    N M++ GV P++ 
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +  L+ GL      E    +  E+VN G+   +V +N ++  LC +G+  KA  L+D  
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID-- 508

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             ME+    P+I++YN LI+G C  GK ++A+ LL+ +L  GL PN+ TY  +       
Sbjct: 509 -LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRD 567

Query: 521 GFIPD 525
           G I D
Sbjct: 568 GRIDD 572



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 202/383 (52%), Gaps = 6/383 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  V     +L     +G   ++      M    I  N   FN V     K   + +A
Sbjct: 339 GIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEA 398

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            DI   M+  G+SP VV Y  LID  CK   +G++  A+  F  M+  G+ PN V F +L
Sbjct: 399 MDIFNKMRQQGLSPNVVNYATLIDALCK---LGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G C  +    A ++F EM + GI   VV +N+++  LC +G++ +A  L D M   G 
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT 515

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P++++ NALI G C     ++A  L D +   GL P+  TYNTL+  YC++GR++DA++
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYS 575

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML  G+ P V TYN ++ GL +       + +   ++ +G +  + TYNI++  L 
Sbjct: 576 VFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLS 635

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+    +A+ +   +   + +    +I+T+N++I    + G+ EDA  L   +   GL+P
Sbjct: 636 KNNCVDEALKMFQSLCSKDLQ---VDIITFNIMIGALLKDGRKEDAMNLFATISANGLVP 692

Query: 506 NQTTYQIVREEMMEKGFIPDIEG 528
           + TTY+++ E ++E+G + + +G
Sbjct: 693 DVTTYRLIAENLIEEGSLEEFDG 715



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 204/379 (53%), Gaps = 6/379 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +  A  K+    +   ++ +M+++ +  N+ ++  +++ LCK G+++ A      M +
Sbjct: 383 NIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P +V +  L+ G C    I K  KA  +F +MV  GI PN V FNT++   C +  
Sbjct: 443 EGVAPNIVVFTSLVYGLCT---IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGR 499

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ + M   G    +++YN+LI G C+ GK DEA  L D M++ GLKPN  T N 
Sbjct: 500 VMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNT 559

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G+C+   ++ A  +F ++   G++P V+TYNT++    K  R  +A  +  +M+  G
Sbjct: 560 LLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TYN ++ GLS+   V+    +   L +  ++  ++T+NI++GAL KDG+ + A+
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAM 679

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           +L      +      P++ TY ++ +   ++G LE+ +G+ +E+ + G  PN      + 
Sbjct: 680 NLFA---TISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLV 736

Query: 515 EEMMEKGFIPDIEGHMYNI 533
             ++ +G I     ++  I
Sbjct: 737 RRLLLRGDISRAGAYLSKI 755



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 173/320 (54%), Gaps = 4/320 (1%)

Query: 192 VLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           +L GLC A ++ +A  ++   M  LG +P VV+YN L+ G+C +    +  +   +  D 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
                 PN V++NT+I+GF  +  +  A  +F +M   GI   VVTY  +I+GLC    +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  +  +M+  G++PN+VT   LI+G+      ++   +  ++S  GL P   TY  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +D  CK+G+  +A  + +SM+ +G+ PDVS Y  ++ G + +G +  + + ++ +V NG+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
                 +NI+  A  K     +A+ + +   KM ++   PN+V Y  LI   C+ G+++D
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFN---KMRQQGLSPNVVNYATLIDALCKLGRVDD 432

Query: 491 ANGLLNELLEKGLIPNQTTY 510
           A    N+++ +G+ PN   +
Sbjct: 433 AELKFNQMINEGVAPNIVVF 452



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 221/460 (48%), Gaps = 31/460 (6%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           G +LH         ++ SFL + V NG                  +  N  I +++  A+
Sbjct: 348 GIILHGYATKGALSEMHSFLDLMVGNG------------------ISPNHYIFNIVFCAF 389

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K        + F +    GL  +V++   L+ AL K G+ +D E  + +M    +  N+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
             F  ++ GLC   K  KA ++  +M + G+ P VV +N ++   C +   G++ KA  +
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTE---GRVMKAQRL 506

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              M   G  P+ +++N LI G C       A K+ + M S G+     TYN+L++G C 
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           DG++D+A ++  EM+++G+ P VVT N +++G  K +   +A+ L+ ++   G   S+ T
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN +++   K   +++A  M  S+  + +  D+ T+N +I  L ++G  E   N+   + 
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQK 485
            NG+   + TY ++   L ++G  ++     D MF +MEK    PN +  N L++    +
Sbjct: 687 ANGLVPDVTTYRLIAENLIEEGSLEE----FDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEK 520
           G +  A   L+++ EK      +T  ++     REE   K
Sbjct: 743 GDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAK 782



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 145/281 (51%), Gaps = 8/281 (2%)

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEA 313
           + P+  T++ L+  FC+   +      F  +   G     VV  N L+ GLC   ++ EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 314 VA-LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE---QGLSPSVITYNT 369
           +  L   M   G  PNVV+ N L+ GFC +   E+A  L   +++   +   P++++YNT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +I+ +  EG+++ A+ +   M D+G+ P+V TY  +I GL +   V+    +  ++++ G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +R  +VTY  L+      G+ K+ V +L EM     E   P+  TY +L+   C+KGK  
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLE---PDCFTYGLLLDYLCKKGKCT 326

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +A  L + ++ KG+ P+ + Y I+      KG + ++   +
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFL 367



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 48/282 (17%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           ++  A+K+F+E   H   A ++ +N L+    V        +   E++ S         N
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAA--VSSASRRGSSSTSELVVSCF-------N 80

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I   C K                 ++P V TY+ L+  +C+ GR+E  FA    +L  
Sbjct: 81  RMIRDCCSK-----------------VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKT 123

Query: 394 G-VLPDVSTYNCLIAGL---SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           G  + DV   N L+ GL    R G   GV  ++  +   G    +V+YN L+   C + +
Sbjct: 124 GWRVNDVVVVNRLLKGLCDAKRVGEAMGV--LLRRMSELGCTPNVVSYNTLLKGFCDENR 181

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +++A+ LL  M   +     PN+V+YN +I GF  +G+++ A  L  ++ ++G+ PN  T
Sbjct: 182 AEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVT 241

Query: 510 YQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           Y I                V ++M++KG  P+I  +   I G
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHG 283


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 218/375 (58%), Gaps = 12/375 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L AL K G   +   +  ++ +R + +NL ++N  + GLC+AG+L +A  +++ M++
Sbjct: 193 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA 252

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V P VVTYN LI G CKK       +A    + M+  G LP++ T+NT+IDG+CK   
Sbjct: 253 YAV-PDVVTYNTLIRGLCKKS---MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ ++    G     VTY SLINGLC +G ++ A+ L +E  A G+KP++V  N+
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+ G C + L+  A  + ++++E+G  P + TYN +I+  CK G + DA  + N  + +G
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 428

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            LPDV T+N LI G  +   ++    ++  +   G+    +TYN ++  LCK GK    V
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK----V 484

Query: 455 SLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + ++E F+ M  +   PN +TYN+LI+ FC+  K+E+A+ ++ ++ ++GL P+  ++  +
Sbjct: 485 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544

Query: 514 REEMMEKGFIPDIEG 528
                  G   D+EG
Sbjct: 545 IYGFCRNG---DLEG 556



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 216/426 (50%), Gaps = 23/426 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    N+II     ++ V+     L    FK     G     ++   L+  L  EG  E 
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-----GFVPDQVTYCSLINGLCAEGDVER 346

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++ E + + I+ ++  +N ++ GLC  G +  A  +M +M   G  P + TYNI+I+
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G I     A  V  D +  G LP+  TFNTLIDG+CK   + +A+++ E M  +G
Sbjct: 407 GLCKMGNISD---ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA   +TYNS++NGLC  GK++E      EM+  G  PN +T N LI  FC+   +E+A 
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 523

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   +S++GL P  +++NTLI  +C+ G +E A+ +   + ++G      T+N LI   
Sbjct: 524 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 583

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           S + N+     I +E+++ G RA   TY +L+   CK     +A   L EM    K+   
Sbjct: 584 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI---KKGFI 640

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ------------TTYQIVREEM 517
           P++ T+  +I       ++  A G+++ +++ G++P                 +I+ E++
Sbjct: 641 PSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDL 700

Query: 518 MEKGFI 523
           M+KG I
Sbjct: 701 MKKGHI 706



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 197/418 (47%), Gaps = 29/418 (6%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY +  +     +AF+R   +    +  + N ++ ALV     +    VY  M    +  
Sbjct: 62  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 121

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +L +    L   C   + + A  ++  +   G     V Y  ++   C     G  + A 
Sbjct: 122 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV---CGLYAHGHTHDAR 174

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F  M+   + PN   FN ++   CK  ++  A  +  ++   G++  + TYN  I GL
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+L EAV L D M A  + P+VVT N LI G CKK + ++A      +  QG  P  
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYNT+ID YCK   +++A  +    + +G +PD  TY  LI GL  EG+VE    + NE
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
               G++  +V YN LV  LC  G    A+ +++E   M +E   P+I TYN++I G C+
Sbjct: 354 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE---MAEEGCHPDIQTYNIVINGLCK 410

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIPD 525
            G + DA  ++N+ + KG +P+  T+                 Q+V E M E G  PD
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPD 467



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 201/392 (51%), Gaps = 22/392 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+R L K+   ++  +  + M  +    +  ++N +++G CK   + +A+++++
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 317

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D    G  P  VTY  LI+G C +G +    +A  +F +    GI P+ V +N+L+ G C
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVE---RALELFNEAQAKGIKPDIVVYNSLVKGLC 374

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               I  A++V  EM   G    + TYN +INGLC  G + +A  + ++ +  G  P+V 
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+G+CK+  ++ A  L + + E G++P  ITYN++++  CK G++ +       M
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G  P+  TYN LI    R   +E    ++ ++   G+    V++N L+   C++G  
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A  L     K+E++       T+N LI  F  K  +  A  + +E+L KG   +  TY
Sbjct: 555 EGAYLLFQ---KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 611

Query: 511 QIVRE----------------EMMEKGFIPDI 526
           +++ +                EM++KGFIP +
Sbjct: 612 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 643



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 31/358 (8%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +    +AG+L  A D  E M      P    YN ++D         + +K   V+  M+ 
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK---VYVRMLA 116

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+  T    +  FC       A+++   +   G     V Y +++ GL   G   +
Sbjct: 117 AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHD 172

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L D+M+ + + PN+   N +++  CK+  V +A +L   + ++G+S ++ TYN  I 
Sbjct: 173 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C+ GR+ +A  + + M    V PDV TYN LI GL ++   +   + +  ++N G   
Sbjct: 233 GLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 291

Query: 433 GLVTYNILVGALCKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              TYN ++   CK    ++A  LL D +FK       P+ VTY  LI G C +G +E A
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFVPDQVTYCSLINGLCAEGDVERA 347

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
             L NE   KG+ P+   Y                  V  EM E+G  PDI+   YNI
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ--TYNI 403


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 218/375 (58%), Gaps = 12/375 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L AL K G   +   +  ++ +R + +NL ++N  + GLC+AG+L +A  +++ M++
Sbjct: 191 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA 250

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V P VVTYN LI G CKK       +A    + M+  G LP++ T+NT+IDG+CK   
Sbjct: 251 YAV-PDVVTYNTLIRGLCKKS---MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ ++    G     VTY SLINGLC +G ++ A+ L +E  A G+KP++V  N+
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+ G C + L+  A  + ++++E+G  P + TYN +I+  CK G + DA  + N  + +G
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            LPDV T+N LI G  +   ++    ++  +   G+    +TYN ++  LCK GK    V
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK----V 482

Query: 455 SLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + ++E F+ M  +   PN +TYN+LI+ FC+  K+E+A+ ++ ++ ++GL P+  ++  +
Sbjct: 483 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542

Query: 514 REEMMEKGFIPDIEG 528
                  G   D+EG
Sbjct: 543 IYGFCRNG---DLEG 554



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 216/426 (50%), Gaps = 23/426 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    N+II     ++ V+     L    FK     G     ++   L+  L  EG  E 
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-----GFVPDQVTYCSLINGLCAEGDVER 344

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++ E + + I+ ++  +N ++ GLC  G +  A  +M +M   G  P + TYNI+I+
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G I     A  V  D +  G LP+  TFNTLIDG+CK   + +A+++ E M  +G
Sbjct: 405 GLCKMGNISD---ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA   +TYNS++NGLC  GK++E      EM+  G  PN +T N LI  FC+   +E+A 
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   +S++GL P  +++NTLI  +C+ G +E A+ +   + ++G      T+N LI   
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           S + N+     I +E+++ G RA   TY +L+   CK     +A   L EM    K+   
Sbjct: 582 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI---KKGFI 638

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ------------TTYQIVREEM 517
           P++ T+  +I       ++  A G+++ +++ G++P                 +I+ E++
Sbjct: 639 PSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDL 698

Query: 518 MEKGFI 523
           M+KG I
Sbjct: 699 MKKGHI 704



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 197/418 (47%), Gaps = 29/418 (6%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY +  +     +AF+R   +    +  + N ++ ALV     +    VY  M    +  
Sbjct: 60  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 119

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +L +    L   C   + + A  ++  +   G     V Y  ++   C     G  + A 
Sbjct: 120 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV---CGLYAHGHTHDAR 172

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F  M+   + PN   FN ++   CK  ++  A  +  ++   G++  + TYN  I GL
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+L EAV L D M A  + P+VVT N LI G CKK + ++A      +  QG  P  
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYNT+ID YCK   +++A  +    + +G +PD  TY  LI GL  EG+VE    + NE
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
               G++  +V YN LV  LC  G    A+ +++E   M +E   P+I TYN++I G C+
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE---MAEEGCHPDIQTYNIVINGLCK 408

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIPD 525
            G + DA  ++N+ + KG +P+  T+                 Q+V E M E G  PD
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPD 465



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 201/392 (51%), Gaps = 22/392 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+R L K+   ++  +  + M  +    +  ++N +++G CK   + +A+++++
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 315

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D    G  P  VTY  LI+G C +G +    +A  +F +    GI P+ V +N+L+ G C
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVE---RALELFNEAQAKGIKPDIVVYNSLVKGLC 372

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               I  A++V  EM   G    + TYN +INGLC  G + +A  + ++ +  G  P+V 
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 432

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+G+CK+  ++ A  L + + E G++P  ITYN++++  CK G++ +       M
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G  P+  TYN LI    R   +E    ++ ++   G+    V++N L+   C++G  
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A  L     K+E++       T+N LI  F  K  +  A  + +E+L KG   +  TY
Sbjct: 553 EGAYLLFQ---KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 609

Query: 511 QIVRE----------------EMMEKGFIPDI 526
           +++ +                EM++KGFIP +
Sbjct: 610 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 641



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 31/358 (8%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +    +AG+L  A D  E M      P    YN ++D         + +K   V+  M+ 
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK---VYVRMLA 114

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+  T    +  FC       A+++   +   G     V Y +++ GL   G   +
Sbjct: 115 AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHD 170

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L D+M+ + + PN+   N +++  CK+  V +A +L   + ++G+S ++ TYN  I 
Sbjct: 171 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C+ GR+ +A  + + M    V PDV TYN LI GL ++   +   + +  ++N G   
Sbjct: 231 GLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 289

Query: 433 GLVTYNILVGALCKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              TYN ++   CK    ++A  LL D +FK       P+ VTY  LI G C +G +E A
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFVPDQVTYCSLINGLCAEGDVERA 345

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
             L NE   KG+ P+   Y                  V  EM E+G  PDI+   YNI
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ--TYNI 401


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/407 (35%), Positives = 218/407 (53%), Gaps = 48/407 (11%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +R   YGL  S  SCN +L  L      ++   +++E+  +    N+ S N +L  L
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLKAL 265

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
             AG+L  A    ++M S    P VVTY  ++ GYC +G +                   
Sbjct: 266 LSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G++  A  V +DM  +G+  + V F T+I GFC   +++AA ++FEE
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-K 343
           M   G+AA  VT+ +LINGLC  G+L EA  +  EM+  GL  +VVT   LI+G+CK+  
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           +VE  RV  +++  + ++P+V+TY  L D  CK+G +  A  + + M ++G+  +V TYN
Sbjct: 443 MVEAFRV-HNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYN 501

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI GL + GN+E    IM E+   G R  + TY  L+  LCK G+  +A ++L EM  +
Sbjct: 502 SLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM--L 559

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +K  K P+I TYNVL+ GFC  G++E    LL  +LEK + PN  TY
Sbjct: 560 DKGIK-PSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY 605



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 199/366 (54%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+S+      ++  L  +G+  D   V ++M    + L+   F  V++G C  G L  A
Sbjct: 317 GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAA 376

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+M+  G++   VT+  LI+G C+ G   ++ +AD V ++MV+ G+  + VT+  L
Sbjct: 377 RRLFEEMQKRGLAADRVTHTALINGLCRAG---ELKEADRVLQEMVDKGLDVDVVTYTVL 433

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK  N+  A +V  EM    +A  VVTY +L +GLC  G +  A  L  EM   GL
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + NV T N+LING CK   +E+A  +  ++   G    V TY TLID  CK G  + A  
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M   MLD+G+ P ++TYN L+ G    G VEG + ++  ++   +R  +VTYN L+   C
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613

Query: 446 KDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            D   K       E++K M  ++  PN  TYN+LIKG C+   +++A     E++EKGL 
Sbjct: 614 IDKNMKSTT----EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLR 669

Query: 505 PNQTTY 510
              ++Y
Sbjct: 670 LTASSY 675



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 6/366 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+     GL +  ++   L+  L + G+ ++ + V +EM  + +++++ ++  +++G CK
Sbjct: 380 FEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCK 439

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G + +A  +  +M    V+P VVTY  L DG CK+G +     A+ +  +M   G+  N
Sbjct: 440 RGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDV---RAANELLHEMCNKGLELN 496

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+LI+G CK  N+  AM++  EM + G    V TY +LI+ LC  G+ D A  +  
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP++ T N L+NGFC    VE  + L + + E+ + P+V+TYN+L+  YC + 
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK 616

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+    +   M  + V P+ +TYN LI G  +  N++       E++  G+R    +Y+
Sbjct: 617 NMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L K  K  +A    D+M + E     P++ ++ + I     +  LE    L +EL
Sbjct: 677 ALIRLLNKKKKFSEARVFFDKM-RNEGLTAEPDVYSFYMDIS--FNEDNLESTITLCDEL 733

Query: 499 LEKGLI 504
           +E   +
Sbjct: 734 VEASHV 739



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 165/324 (50%), Gaps = 3/324 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL   V++   L+    K G   +   V+ EM  RR+  N+ ++  + +GLCK G + 
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A++++ +M + G+   V TYN LI+G CK    G + +A  +  +M   G   +  T+ 
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCK---FGNLEQAMRIMTEMEAAGHRTDVYTYT 536

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLID  CK      A  + +EM   GI   + TYN L+NG C+ G+++    L + M+  
Sbjct: 537 TLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            ++PNVVT N+L+  +C  K ++    ++  +  Q ++P+  TYN LI  +CK   M++A
Sbjct: 597 NVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M+++G+    S+Y+ LI  L+++      R   +++ N G+ A    Y+  +  
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDI 716

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEK 467
              +   +  ++L DE+ +    K
Sbjct: 717 SFNEDNLESTITLCDELVEASHVK 740



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 144/276 (52%), Gaps = 14/276 (5%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + + + + G+ P+  + N ++     DE    A+ +F E+        V ++N L+  L 
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRLPLDE----AIALFRELPD----KNVCSHNILLKALL 266

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G+L +A    DEM +    P+VVT   +++G+C +  +E A  L D+++ +GL  +  
Sbjct: 267 SAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNAT 323

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y ++I   C +G++ DA  +   M   GV  D   +  +I+G   +G++   R +  E+
Sbjct: 324 VYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
              G+ A  VT+  L+  LC+ G+ K+A  +L EM     +    ++VTY VLI G+C++
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDV---DVVTYTVLIDGYCKR 440

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G + +A  + NE++ + + PN  TY  + + + ++G
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG 476



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 30/228 (13%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+  + NA+++    +  +++A  LF ++ ++    +V ++N L+ A    GR++DA
Sbjct: 223 GLSPSPESCNAVLS----RLPLDEAIALFRELPDK----NVCSHNILLKALLSAGRLKDA 274

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
               + M      PDV TY  ++ G    G +E    +++E+   G+ +    Y  ++  
Sbjct: 275 CQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIAL 331

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC  G+   A+ +L++M          + V +  +I GFC KG L  A  L  E+ ++GL
Sbjct: 332 LCNKGQVSDALRVLEDM---TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGL 388

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             ++ T+                  V +EM++KG   D+  +   I G
Sbjct: 389 AADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDG 436


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 218/375 (58%), Gaps = 12/375 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L AL K G   +   +  ++ +R + +NL ++N  + GLC+AG+L +A  +++ M++
Sbjct: 190 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA 249

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V P VVTYN LI G CKK       +A    + M+  G LP++ T+NT+IDG+CK   
Sbjct: 250 YAV-PDVVTYNTLIRGLCKKS---MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ ++    G     VTY SLINGLC +G ++ A+ L +E  A G+KP++V  N+
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+ G C + L+  A  + ++++E+G  P + TYN +I+  CK G + DA  + N  + +G
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            LPDV T+N LI G  +   ++    ++  +   G+    +TYN ++  LCK GK    V
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK----V 481

Query: 455 SLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + ++E F+ M  +   PN +TYN+LI+ FC+  K+E+A+ ++ ++ ++GL P+  ++  +
Sbjct: 482 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541

Query: 514 REEMMEKGFIPDIEG 528
                  G   D+EG
Sbjct: 542 IYGFCRNG---DLEG 553



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 216/426 (50%), Gaps = 23/426 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    N+II     ++ V+     L    FK     G     ++   L+  L  EG  E 
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-----GFVPDQVTYCSLINGLCAEGDVER 343

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++ E + + I+ ++  +N ++ GLC  G +  A  +M +M   G  P + TYNI+I+
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G I     A  V  D +  G LP+  TFNTLIDG+CK   + +A+++ E M  +G
Sbjct: 404 GLCKMGNISD---ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA   +TYNS++NGLC  GK++E      EM+  G  PN +T N LI  FC+   +E+A 
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   +S++GL P  +++NTLI  +C+ G +E A+ +   + ++G      T+N LI   
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           S + N+     I +E+++ G RA   TY +L+   CK     +A   L EM    K+   
Sbjct: 581 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI---KKGFI 637

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ------------TTYQIVREEM 517
           P++ T+  +I       ++  A G+++ +++ G++P                 +I+ E++
Sbjct: 638 PSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDL 697

Query: 518 MEKGFI 523
           M+KG I
Sbjct: 698 MKKGHI 703



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 197/418 (47%), Gaps = 29/418 (6%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY +  +     +AF+R   +    +  + N ++ ALV     +    VY  M    +  
Sbjct: 59  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 118

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +L +    L   C   + + A  ++  +   G     V Y  ++   C     G  + A 
Sbjct: 119 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV---CGLYAHGHTHDAR 171

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F  M+   + PN   FN ++   CK  ++  A  +  ++   G++  + TYN  I GL
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+L EAV L D M A  + P+VVT N LI G CKK + ++A      +  QG  P  
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYNT+ID YCK   +++A  +    + +G +PD  TY  LI GL  EG+VE    + NE
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
               G++  +V YN LV  LC  G    A+ +++E   M +E   P+I TYN++I G C+
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE---MAEEGCHPDIQTYNIVINGLCK 407

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIPD 525
            G + DA  ++N+ + KG +P+  T+                 Q+V E M E G  PD
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPD 464



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 201/392 (51%), Gaps = 22/392 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+R L K+   ++  +  + M  +    +  ++N +++G CK   + +A+++++
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 314

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D    G  P  VTY  LI+G C +G +    +A  +F +    GI P+ V +N+L+ G C
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVE---RALELFNEAQAKGIKPDIVVYNSLVKGLC 371

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               I  A++V  EM   G    + TYN +INGLC  G + +A  + ++ +  G  P+V 
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 431

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+G+CK+  ++ A  L + + E G++P  ITYN++++  CK G++ +       M
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G  P+  TYN LI    R   +E    ++ ++   G+    V++N L+   C++G  
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A  L     K+E++       T+N LI  F  K  +  A  + +E+L KG   +  TY
Sbjct: 552 EGAYLLFQ---KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 608

Query: 511 QIVRE----------------EMMEKGFIPDI 526
           +++ +                EM++KGFIP +
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 640



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 31/358 (8%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +    +AG+L  A D  E M      P    YN ++D         + +K   V+  M+ 
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK---VYVRMLA 113

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+  T    +  FC       A+++   +   G     V Y +++ GL   G   +
Sbjct: 114 AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHD 169

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L D+M+ + + PN+   N +++  CK+  V +A +L   + ++G+S ++ TYN  I 
Sbjct: 170 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C+ GR+ +A  + + M    V PDV TYN LI GL ++   +   + +  ++N G   
Sbjct: 230 GLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 288

Query: 433 GLVTYNILVGALCKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              TYN ++   CK    ++A  LL D +FK       P+ VTY  LI G C +G +E A
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFVPDQVTYCSLINGLCAEGDVERA 344

Query: 492 NGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
             L NE   KG+ P+   Y                  V  EM E+G  PDI+   YNI
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ--TYNI 400


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 248/457 (54%), Gaps = 26/457 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLA 125
           GR L S+   K+Y  + S  +     G    V+   ++L+   + LCR N ++  + +L 
Sbjct: 96  GRFLGSIAKKKQYSTVVSLCNQMDLFG----VTHNVYSLNILINCLCRLNHVVFAISVLG 151

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
                      + FK     G++   ++ N L+     EG+ ++   ++ EM RR  + +
Sbjct: 152 -----------KMFK----LGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPD 196

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + S++ V+NGLCK+G  + A  ++  M+  G  P +V Y  +ID  CK   +     A  
Sbjct: 197 VISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVN---DAMD 253

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +  +MV+ GI P+ VT++T++ GFC   +++ A  +F EM    +    VT+  L++GLC
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G + EA  + + M   G +PN  T NAL++G+C    +++A+ + D + ++G +P V 
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +YN LI+ YCK  R+++A ++   M ++ + PD  TY+ L+ GL + G  +   N+  E+
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            ++G+   L+TY+ L+  LCK G   +A+ LL     M++ K  P+IV YN+LI+G    
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLK---SMQESKIEPDIVLYNILIEGMFIA 490

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           GKLE A  L ++L   G+ P   TY I+ + ++++G 
Sbjct: 491 GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGL 527



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 215/374 (57%), Gaps = 6/374 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V+S + ++  L K G       + ++M+ +  + NL ++  +++ LCK   +N A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++ +M   G+ P VVTY+ ++ G+C    +G + +A  +F +MV   ++PN VTF  L
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFC---SLGHLNEATILFNEMVGRNVMPNTVTFTIL 308

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK+  +S A  VFE M   G      TYN+L++G C++ ++DEA  + D M+  G 
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P V + N LING+CK++ +++A+ L  ++SE+ L+P  +TY+TL+   C+ GR ++A  
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G+LPD+ TY+ L+ GL + G+++    ++  +  + +   +V YNIL+  + 
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             GK + A  L  ++F    +   P I TY ++IKG  ++G  ++A  L  ++ + G +P
Sbjct: 489 IAGKLEVAKELFSKLF---ADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 506 NQTTYQIVREEMME 519
           N  +Y ++ +  ++
Sbjct: 546 NSCSYNVIIQGFLQ 559



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 211/380 (55%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  +  ++  + G K ++++   ++ +L K+    D   +  EM  R I  ++ +++ +L
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C  G LN+A+ +  +M    V P  VT+ IL+DG CK+G +    +A  VF+ M + 
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS---EARCVFEAMTKK 331

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN  T+N L+DG+C +  +  A KV + M   G A  V +YN LING C   +LDEA
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 391

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +L  EM    L P+ VT + L+ G C+    ++A  LF ++   GL P ++TY+TL+D 
Sbjct: 392 KSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G +++A  +  SM +  + PD+  YN LI G+   G +E  + + ++L  +G++  
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TY I++  L K+G S +A  L     KME +   PN  +YNV+I+GF Q      A  
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFR---KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L++E++ K    + +T+Q++
Sbjct: 569 LIDEMVGKRFSADSSTFQML 588



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 213/419 (50%), Gaps = 35/419 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R      + SV+   + L ++ K+ ++  V  +  +M    +  N+ S N ++N
Sbjct: 76  ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------- 237
            LC+   +  A  ++  M  LG+ P  +T+N LI+G C +G I                 
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          G    A  + + M E G  PN V + T+ID  CKD  ++ AM + 
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM   GI   VVTY+++++G C  G L+EA  L +EM+   + PN VT   L++G CK+
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            +V +AR +F+ ++++G  P+  TYN L+D YC   +M++A  + + M+D+G  P V +Y
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N LI G  +   ++  ++++ E+    +    VTY+ L+  LC+ G+ ++A++L  EM  
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC- 434

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                  P+++TY+ L+ G C+ G L++A  LL  + E  + P+   Y I+ E M   G
Sbjct: 435 --SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 189/375 (50%), Gaps = 22/375 (5%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D    +  M R     ++  F   L  + K  + +    +   M   GV+  V + NIL
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  C+   +  +  A +V   M + GI P+ +TFNTLI+G C +  I  A+ +F EM  
Sbjct: 134 INCLCR---LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    V++Y+++INGLC  G    A+ L  +M   G KPN+V    +I+  CK  LV  
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L  ++ ++G+ P V+TY+T++  +C  G + +A  + N M+ R V+P+  T+  L+ 
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL +EG V   R +   +   G      TYN L+   C + +  +A  +LD M     + 
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV---DKG 367

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--------QIVR----- 514
             P + +YN+LI G+C++ +L++A  LL E+ EK L P+  TY        Q+ R     
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427

Query: 515 ---EEMMEKGFIPDI 526
              +EM   G +PD+
Sbjct: 428 NLFKEMCSSGLLPDL 442



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 181/357 (50%), Gaps = 17/357 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A +T  DSLC+++++ D +              +      D G+   V++ + +L     
Sbjct: 234 AYTTIIDSLCKDTLVNDAM--------------DLLSEMVDRGIPPDVVTYSTILHGFCS 279

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G   +   ++ EM  R +  N  +F  +++GLCK G +++A  + E M   G  P   T
Sbjct: 280 LGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN L+DGYC      +M +A  V   MV+ G  P   ++N LI+G+CK   +  A  +  
Sbjct: 340 YNALMDGYCLNN---QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM    +    VTY++L+ GLC  G+  EA+ L  EM +SGL P+++T + L++G CK  
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  L   + E  + P ++ YN LI+     G++E A  + + +   G+ P + TY 
Sbjct: 457 HLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYT 516

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +I GL +EG  +    +  ++ ++G      +YN+++    ++  S  A+ L+DEM
Sbjct: 517 IMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 5/260 (1%)

Query: 268 GFCKDENISA--AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           GF  + +IS   A+  F  M        VV +   +  +    +    V+L ++M   G+
Sbjct: 64  GFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGV 123

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             NV + N LIN  C+   V  A  +   + + G+ P  IT+NTLI+  C EG +++A  
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVG 183

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+ RG  PDV +Y+ +I GL + GN      ++ ++   G +  LV Y  ++ +LC
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC 243

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           KD     A+ LL EM         P++VTY+ ++ GFC  G L +A  L NE++ + ++P
Sbjct: 244 KDTLVNDAMDLLSEMV---DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300

Query: 506 NQTTYQIVREEMMEKGFIPD 525
           N  T+ I+ + + ++G + +
Sbjct: 301 NTVTFTILVDGLCKEGMVSE 320


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 236/466 (50%), Gaps = 59/466 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLG---FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           ++ + D  + AY +   PHL      + +R     ++ S+ + N +L AL +        
Sbjct: 130 STPLADAALSAYSRLRLPHLAAQLLHSLRR--RVRVRPSLQAANAVLSALARSPSTSPQA 187

Query: 172 YV--YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            +  ++ +   R+  N  +FN +++  C  G L  A   +  M+  G+SP  VTYN L++
Sbjct: 188 SLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLN 247

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            +C+KG +G   +A A+   M ++G+ P   T+NTL+  + +   I  A KV E M ++G
Sbjct: 248 AHCRKGMLG---EARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKPNVVTSNALINGFCKKKLVEKA 348
               + TYN L  GLC  GK+DEA  L+DEM   G L P+VVT N L +   K +    A
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L +++ E+G+  +++T+N +I   CK+G +E A    N M D G+ PDV TYN LI  
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL----------D 458
             + GN+     +M+E+V  G++    T N ++  LCK+ + ++A  LL          D
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 459 EM---------FK-------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           E+         FK             M ++K  P+I TYN LIKG  + G+L++A   LN
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 497 ELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           EL+EKGL+P+ TTY I+                  +M+E  F PD+
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDV 590



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 237/472 (50%), Gaps = 27/472 (5%)

Query: 72  SLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDMLML 124
           S+V  + +P   +F   +H     G      T+  ALST S      L  +++  + L+ 
Sbjct: 194 SIVALRLHPNHYTFNLLVHTHCSKG------TLADALSTLSTMQGFGLSPDAVTYNTLLN 247

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A+ +            R    G+  +  + N L+ A  + G  +    V + M     E 
Sbjct: 248 AHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEP 307

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKA 243
           +L ++N +  GLC+AGK+++A  + ++M+ LG + P VVTYN L D  C K        A
Sbjct: 308 DLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADA-CFKCRCSS--DA 364

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + ++M E G+    VT N +I G CKD  +  A+    +M   G+A  V+TYN+LI+ 
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            C  G + +A  L DEM+  GLK +  T N ++   CK+K  E+A+ L     ++G  P 
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            ++Y T++ AY KE   E A  + + M+++ + P +STYN LI GLSR G ++   + +N
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           EL+  G+     TYNI++ A CK+G  + A    ++M  +E   K P++VT N L+ G C
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM--VENSFK-PDVVTCNTLMNGLC 601

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG-------FIPDIEG 528
             GKL+ A  L    +EKG   +  TY  + + M + G       F  D+E 
Sbjct: 602 LNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEA 653



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 70/441 (15%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V++ N L  A  K     D   + +EM+ + ++  L + N V+ GLCK G+L  A 
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY------------------------- 241
             +  M   G++P V+TYN LI  +CK G I K Y                         
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460

Query: 242 -------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                  +A  + +   + G +P+EV++ T++  + K+ N   A+++++EM    +   +
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGL----------------------------- 325
            TYN+LI GL   G+L EA+   +E+M  GL                             
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580

Query: 326 ------KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                 KP+VVT N L+NG C    ++KA  LF+   E+G    VITYNTLI   CK+G 
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ A      M  RG+ PD  TYN +++ LS  G  E  +N++++L  +G  +   +  +
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPL 700

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L  +   + +S K     +E  +  ++        Y  L+ G C  G+ ++A  +L+E++
Sbjct: 701 LKPSSVDEAESGKDAKTEEETVENPQDSASE---AYTKLVNGLCTSGQFKEAKAILDEMM 757

Query: 500 EKGLIPNQTTYQIVREEMMEK 520
           +KG+  + +TY  + E ++++
Sbjct: 758 QKGMSVDSSTYITLMEGLVKR 778



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 3/232 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  +    ++++ AY K       F+   +  +   K  V++CN L+  L   GK +   
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +++    +  ++++ ++N ++  +CK G ++ A     DM++ G+ P   TYN+++   
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            +    G+  +A  +   + E+G L    +   L      +       K  EE   +   
Sbjct: 671 SEA---GRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQD 727

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           +    Y  L+NGLC  G+  EA A+ DEMM  G+  +  T   L+ G  K++
Sbjct: 728 SASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 97/220 (44%), Gaps = 5/220 (2%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H + K G   +     + +    +S   + +  + LM     N K     + F+   +
Sbjct: 561 IIHAYCKEGDLENAFQFHNKM--VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G K  V++ N L++ + K+G  +   + + +M+ R ++ +  ++N VL+ L +AG+  +
Sbjct: 619 KGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEE 678

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +++  +   G   +  +  +L      +   GK  K +   ++ VEN        +  
Sbjct: 679 AQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTE---EETVENPQDSASEAYTK 735

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           L++G C       A  + +EM   G++    TY +L+ GL
Sbjct: 736 LVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 238/472 (50%), Gaps = 54/472 (11%)

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY---GLKSS 150
           KF   +++     T       N ++ + L+  Y K    +LG +A +  GD    G+  +
Sbjct: 331 KFNEANSVLK--ETLEKGFTPNEVVYNTLIDGYCK--MGNLG-DALRIRGDMVSKGINPN 385

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN---------------- 194
            ++ N +++   K G+ E  E + +EM  R   +N  +F  +++                
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445

Query: 195 -------------------GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
                              GLCK GK + A ++   +   G    +VT N LI G CK G
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
               M +A  + K M+E G + +++T+NTLI G CK+  +    K+  EM   GI     
Sbjct: 506 ---NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN LI+G+C  GKLDEAV L +E  +  L PNV T   +I+G+CK   +E+   LF ++
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             Q L  + + YNTLI AYC+ G   +AF + + M  +G+ P  +TY+ LI G+   G +
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  + +++E+   G+   +V Y  L+G  CK G+  K V++L EM   +     PN +TY
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH---PNKITY 739

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
            V+I G+ + G ++ A  LL+E++ KG++P+  TY ++     +E  +E+GF
Sbjct: 740 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 218/432 (50%), Gaps = 6/432 (1%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           +P +++   +     K   +   +    T    +  +  +    + A+ K  K     + 
Sbjct: 209 FPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G+  +V++ N L+  L K G  ++     ++M +  +   L +++ ++NGL K
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             K N+A+ ++++    G +P  V YN LIDGYCK G +G   +   +  DMV  GI PN
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR---IRGDMVSKGINPN 385

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT N++I GFCK   +  A  + EEM S G +     + ++I+ LC++ + + A+    
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+   ++PN      L+ G CK+     A  L+  + E+G   +++T N LI   CK G
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M++A  +   ML+RG + D  TYN LI+G  +EG VE    +  E+V  G+     TYN
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +L+  +C+ GK  +AV+L +E    +     PN+ TY V+I G+C+  K+E+   L  EL
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNE---CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 499 LEKGLIPNQTTY 510
           L + L  N   Y
Sbjct: 623 LTQNLELNSVVY 634



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 16/411 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV----KNMKPHLGFEAF 139
           + +H    N +F S      AL    + L RN    D L+   V    K  K     E +
Sbjct: 426 TIIHWLCMNSRFES------ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            R  + G  +++++ N L+  L K G  ++   + K+M  R   L+  ++N +++G CK 
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK+ +   +  +M   G+ P   TYN+LI G C+   IGK+ +A  ++ +     ++PN 
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR---IGKLDEAVNLWNECKSRDLVPNV 596

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            T+  +IDG+CK + I    K+F E+ +  +    V YN+LI   C +G   EA  L D+
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M + G+ P   T ++LI+G C    +E A+ L D++ ++GL P+V+ Y  LI  YCK G+
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M+    +   M    + P+  TY  +I G S+ G+++    +++E+V  G+    VTYN+
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           L    CK+GK ++   + D    M +E    + +TY  L+ G+ Q   L +
Sbjct: 777 LTNGFCKEGKIEEGFKICD---YMSQEGLPLDEITYTTLVHGWQQPSALTN 824



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 200/377 (53%), Gaps = 27/377 (7%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F +   V++ +  + +   + +  F+L+ L KA +L K+  + E M+  GVSP V  ++ 
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFST 251

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            I+ +CK G   K+  A  +F DM + G+ PN VT+N LI G CK  N+  A +  E+M 
Sbjct: 252 AINAFCKGG---KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 308

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+ A ++TY+ LINGL    K +EA ++  E +  G  PN V  N LI+G+CK   + 
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 368

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  +  D+  +G++P+ +T N++I  +CK G+ME A  +   ML RG   +   +  +I
Sbjct: 369 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 428

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRA--GLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
             L      E     + E++   MR   GL+T   LVG LCK+GK   AV L    F++ 
Sbjct: 429 HWLCMNSRFESALRFLREMLLRNMRPNDGLLT--TLVGGLCKEGKHSDAVEL---WFRLL 483

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI------------ 512
           ++    N+VT N LI G C+ G +++A  LL ++LE+G + ++ TY              
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543

Query: 513 ----VREEMMEKGFIPD 525
               +R EM+++G  PD
Sbjct: 544 EGFKLRGEMVKQGIEPD 560


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 260/519 (50%), Gaps = 30/519 (5%)

Query: 4   SANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRAS-HS 62
           +A S+I ++   +   H   L N +P ++  +        +     F  S  E R +  +
Sbjct: 68  AACSSIRNVLPSLSVRHVVDLINRNPLSLPHR-------SIFAFFKFISSQPEFRFTVET 120

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS-LCRNSIIIDM 121
             +  R L    + + + + +S + + V      S S++F +L     + +C    ++D 
Sbjct: 121 YFVMARFL---AIHEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMC--DFLVDA 175

Query: 122 LMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           LM+ Y+      LGF     + F+ +  +     +  C  LL  ++K      V   Y E
Sbjct: 176 LMITYMD-----LGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYME 230

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +      LN+  FN ++N  CK G +  A  + +++    + P VV++N LI+GYCK G 
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +   ++       M ++   P+  T++ LI+  CK+  +  A ++F EM   G+    V 
Sbjct: 291 LDVGFRLK---HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVI 347

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           + +LI+G   +G++D       +M++ GL+P++V  N L+NGFCK   +  AR + D + 
Sbjct: 348 FTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL P  +TY TLID +C+ G ++ A  +R  M   G+  D   ++ LI G+ +EG V 
Sbjct: 408 RRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVI 467

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                + E++  GM+   VTY +++ A CK G ++    LL E   M+ +   PN+VTYN
Sbjct: 468 DAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKE---MQSDGHIPNVVTYN 524

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           VL+ G C+ G++++A+ LL+ +L  G++P+  TY  + E
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLE 563



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 199/374 (53%), Gaps = 9/374 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   +V   N L+    KEG   D + V+ E+ +R +   + SFN ++NG CK G L+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLD 292

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
               +   M+     P V TY+ LI+  CK+    KM  A  +F +M E G++PN+V F 
Sbjct: 293 VGFRLKHHMEKSRTRPDVFTYSALINALCKEN---KMDGAHRLFYEMCERGLIPNDVIFT 349

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI G  ++  I    + +++M S G+   +V YN+L+NG C +G L  A  + D M+  
Sbjct: 350 TLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P+ VT   LI+GFC+   V+ A  +  ++ + G+    + ++ LI   CKEGR+ DA
Sbjct: 410 GLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDA 469

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 ML  G+ PD  TY  ++    ++G+ +    ++ E+ ++G    +VTYN+L+  
Sbjct: 470 ERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNG 529

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G+ K A  LLD M  +      P+ +TYN L++G  +     +A+    +  E G+
Sbjct: 530 LCKLGQMKNADMLLDAMLNV---GVVPDDITYNTLLEGHHRHA---NASKHYKQKPEIGI 583

Query: 504 IPNQTTYQIVREEM 517
           + +  +Y+ +  E+
Sbjct: 584 VADLASYKSLVNEL 597



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 161/295 (54%), Gaps = 6/295 (2%)

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L+D   K    G ++     + ++++ G   N   FN L++ FCK+ NI  A KVF+E+ 
Sbjct: 211 LLDRMMKLNPTGTVW---GFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEIT 267

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   VV++N+LING C  G LD    L+  M  S  +P+V T +ALIN  CK+  ++
Sbjct: 268 KRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMD 327

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  LF ++ E+GL P+ + + TLI  + + G+++        ML +G+ PD+  YN L+
Sbjct: 328 GAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLV 387

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  + G++   RNI++ ++  G+R   VTY  L+   C+ G    A+ +  E   M++ 
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKE---MDQN 444

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               + V ++ LI G C++G++ DA   L E+L  G+ P+  TY ++ +   +KG
Sbjct: 445 GIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKG 499



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 3/263 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+D   K          + E+   G    V  +N L+N  C +G + +A  + DE+    
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P VV+ N LING+CK   ++    L   + +    P V TY+ LI+A CKE +M+ A 
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M +RG++P+   +  LI G SR G ++ ++    ++++ G++  +V YN LV   
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+G    A +++D M +       P+ VTY  LI GFC+ G ++ A  +  E+ + G+ 
Sbjct: 391 CKNGDLVAARNIVDGMIR---RGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIE 447

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
            ++  +  +   M ++G + D E
Sbjct: 448 LDRVGFSALICGMCKEGRVIDAE 470



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 8/216 (3%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F KNG   +   I   +      L  + +    L+  + +        E  K     G++
Sbjct: 390 FCKNGDLVAARNIVDGM--IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIE 447

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
              +  + L+  + KEG+  D E   +EM R  ++ +  ++  +++  CK G       +
Sbjct: 448 LDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKL 507

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +++M+S G  P VVTYN+L++G CK   +G+M  AD +   M+  G++P+++T+NTL++G
Sbjct: 508 LKEMQSDGHIPNVVTYNVLLNGLCK---LGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             +  N S   K   E+   GI A + +Y SL+N L
Sbjct: 565 HHRHANASKHYKQKPEI---GIVADLASYKSLVNEL 597


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G +  V++ N ++  + + G       + ++M+ R ++ ++ +++ +++ LC+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A  + ++M++ G+   VVTYN L+ G CK G   K      + KDMV   I+PN +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVI 299

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN L+D F K+  +  A ++++EM + GI+  ++TYN+L++G C+  +L EA  + D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           + +   P++VT  +LI G+C  K V+    +F +IS++GL  + +TY+ L+  +C+ G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +   M+  GVLPDV TY  L+ GL   G +E    I  +L  + M  G+V Y  +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A +L      +  +   PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 480 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  +    +  G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDG 557



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 200/355 (56%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+  I                    FK     G+KSSV++ N L+R L K G
Sbjct: 232 STIIDSLCRDGCI--------------DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K+ D   + K+M  R I  N+ +FN +L+   K GKL +A+++ ++M + G+SP ++TYN
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC +    ++ +A+ +   MV N   P+ VTF +LI G+C  + +   MKVF  +
Sbjct: 338 TLMDGYCMQN---RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+ A  VTY+ L+ G C  GK+  A  L  EM++ G+ P+V+T   L++G C    +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +F+D+ +  +   ++ Y T+I+  CK G++EDA+ +  S+  +GV P+V TY  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+GL ++G++     ++ ++  +G      TYN L+ A  +DG    +  L++EM
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 220/389 (56%), Gaps = 14/389 (3%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  +  ++  +  +K+ V + + ++ +L ++G  +    ++KEM+ + I+ ++ ++N ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLCKAGK N  + +++DM S  + P V+T+N+L+D + K+   GK+ +A+ ++K+M+  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE---GKLQEANELYKEMITR 327

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI PN +T+NTL+DG+C    +S A  + + M  +  +  +VT+ SLI G C+  ++D+ 
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +   +   GL  N VT + L+ GFC+   ++ A  LF ++   G+ P V+TY  L+D 
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447

Query: 374 YCKEGRMEDAFA----MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            C  G++E A      ++ S +D G++     Y  +I G+ + G VE   N+   L   G
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  ++TY +++  LCK G   +A  LL    KME++   PN  TYN LI+   + G L 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMM 518
            +  L+ E+   G   + ++ ++V + ++
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 203/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++   A+ +  +F  V    K+++   I  N+ + N ++N  C+  K   A  ++
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P   T+N LI G   +G   K+ +A  +   MVENG  P+ VT+N++++G 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEG---KVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  + S A+ +  +M    + A V TY+++I+ LC DG +D A++L  EM   G+K +V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N+L+ G CK        +L  D+  + + P+VIT+N L+D + KEG++++A  +   
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ RG+ P++ TYN L+ G   +  +    N+++ +V N     +VT+  L+   C   +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
               + +      + K     N VTY++L++GFCQ GK++ A  L  E++  G++P+  T
Sbjct: 384 VDDGMKVFRN---ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 510 YQIVREEMMEKG 521
           Y I+ + + + G
Sbjct: 441 YGILLDGLCDNG 452



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 11/340 (3%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC---- 232
           M +R I  N+ +   +   L K G L   +D++  + S   S +    +I     C    
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLR--TDLLCTISSFFSSCERDFSSISNGNVCFRER 59

Query: 233 KKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            + GI  + K DA+  F++M+ +  LP+ V F+       + +  +  +   +++  +GI
Sbjct: 60  LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A  + T N +IN  C   K   A ++  ++M  G +P+  T N LI G   +  V +A V
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D + E G  P V+TYN++++  C+ G    A  +   M +R V  DV TY+ +I  L 
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R+G ++   ++  E+   G+++ +VTYN LV  LCK GK      LL +M   E     P
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVP 296

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N++T+NVL+  F ++GKL++AN L  E++ +G+ PN  TY
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 245/503 (48%), Gaps = 62/503 (12%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P L +++F W+ ++    H +       HS             L + VK+G       ++
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDV-------HSY---------NHLLDILVKSGHHFRTGKVY 50

Query: 103 HAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
             L  S CS +L    +   +L+    K  +     E  +   ++ +   V   N L+  
Sbjct: 51  KDLLHSGCSPNL----VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHG 106

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VS 218
           L K+G  +    +++ M+  R++  + ++N V++GLCK+G L KA +++E+M   G   +
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSA 166

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P +VTYN LI+ + +     ++ +A A  + M   GI P+ +T N L+ G CKD ++  A
Sbjct: 167 PDIVTYNTLINAFYRA---SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEA 223

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGK----------------------------- 309
           +++ + M   G    V+TYNS+I+ LCV GK                             
Sbjct: 224 LEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCK 283

Query: 310 ---LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              L  A+ + +EM    + P+V+T   L+NG C+   V+ A  L ++I  QG  P VI 
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y +L+D  CK G +E+A  +   M  RG    V  Y+ L++G  R GNV   R I+ E+V
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           +  M   L TYNI++G L KDG   KAVSL+ ++         P++VTYN LI G C+  
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV---ARGYVPDVVTYNTLIDGLCKAN 460

Query: 487 KLEDANGLLNELLEKGLIPNQTT 509
           ++ +A  L +E+  +G  PN  T
Sbjct: 461 RVREACDLADEMASRGCFPNDVT 483



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 218/450 (48%), Gaps = 57/450 (12%)

Query: 128 KNMKPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++ +P L  + F  AG+  G K  V S N LL  LVK G       VYK++       NL
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +F  ++ G CKAG+  +A + +  +    V+P V  +N+LI G  K G   +  K   +
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK---L 119

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG--IAAGVVTYNSLINGL 304
           F++M  + + P  VT+NT+I G CK  N+  A ++ EEM   G   A  +VTYN+LIN  
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
               ++ EA A R++M A+G+ P+V+T N L++G CK   VE+A  + D +   G  P V
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 365 ITY--------------------------------NTLIDAYCKEGRMEDAFAMRNSMLD 392
           ITY                                NTL+D +CK G +  A  +   M  
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             +LPDV TY  L+ GL R G V+    ++ E+V  G    ++ Y  LV  LCK G+ ++
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L+ E   M        +V Y+ L+ G+C+ G +  A  +L E++   ++P   TY I
Sbjct: 360 AHKLVKE---MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416

Query: 513 VR----------------EEMMEKGFIPDI 526
           V                  +++ +G++PD+
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDV 446



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 216/396 (54%), Gaps = 25/396 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   VL+CN L+  + K+G  E+   +   MK      ++ ++N +++ LC AGK+ +A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           ++I+   K++  SP +VT+N L+DG+CK G    + +A  V ++M    ILP+ +T+  L
Sbjct: 259 AEIL---KTMSCSPDLVTFNTLLDGFCKAG---MLPRALEVLEEMCRENILPDVITYTIL 312

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G C+   +  A  + EE+   G    V+ Y SL++GLC  G+++EA  L  EM   G 
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +  VV  ++L++G+C+   V KAR +  ++    + P + TYN ++    K+G +  A +
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + ++ RG +PDV TYN LI GL +   V    ++ +E+ + G     VT   +V  LC
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G+   A SL+ EM    +++  PN+V Y  LI G C+  +++DA  +L+ +  +G+  
Sbjct: 493 RVGRVDDAWSLVVEM---SRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVAL 549

Query: 506 NQTTYQ----------------IVREEMMEKGFIPD 525
           +   Y+                 + +EM+ +GF+PD
Sbjct: 550 DDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N ++ AL   GK  +   + K M       +L +FN +L+G CKAG L +A
Sbjct: 234 GPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRA 290

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++E+M    + P V+TY IL++G C+   +G++  A  + +++V  G +P+ + + +L
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCR---VGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK   I  A K+ +EM   G   GVV Y+SL++G C  G + +A  +  EM++  +
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P + T N ++ G  K   + KA  L  D+  +G  P V+TYNTLID  CK  R+ +A  
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  RG  P+  T   ++ GL R G V+   +++ E+        +V Y  L+  LC
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 527

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  +   A  +LD    M  +    +   Y  LI      G++ +A  + +E++ +G +P
Sbjct: 528 KSDRMDDACMVLD---AMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584

Query: 506 NQTTYQIVREEMM 518
           + +T + + E  M
Sbjct: 585 DGSTSKTLEEAAM 597



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 183/338 (54%), Gaps = 27/338 (7%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G    V +YN L+D   K G     ++   V+KD++ +G  PN VTF  LI G CK    
Sbjct: 22  GYKHDVHSYNHLLDILVKSG---HHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A++    +    +A  V  +N LI+GL  DG  D+AV L + M +S +KP +VT N +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 336 INGFCKKKLVEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           I+G CK   +EKAR L +++  +G   +P ++TYNTLI+A+ +  R+ +A A R  M   
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ PDV T N L++G+ ++G+VE    I++ +   G    ++TYN ++ ALC  GK  +A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
             +L  M         P++VT+N L+ GFC+ G L  A  +L E+  + ++P+  TY I 
Sbjct: 259 AEILKTM------SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 513 ---------------VREEMMEKGFIPDIEGHMYNISG 535
                          + EE++ +G+IPD+  +   + G
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 350



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 164/391 (41%), Gaps = 91/391 (23%)

Query: 61  HSLLLTGRLLHSLVVAKKY---PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           H+L + G+++ +  + K     P + +F   L  F K G       +        + +CR
Sbjct: 247 HALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL-------EEMCR 299

Query: 115 NSIIIDMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            +I+ D++    + N    +G     F   +     G    V++   L+  L K G+ E+
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + KEM  R     +  ++ +++G C+AG ++KA +I+ +M S+ + P + TYNI++ 
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G  K G I K   A ++  D+V  G +P+ VT+NTLIDG CK   +  A  + +EM S G
Sbjct: 420 GLIKDGSISK---AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476

Query: 290 I-----------------------------------AAGVVTYNSLINGLCVDGKLDEAV 314
                                               A  VV Y SLI+GLC   ++D+A 
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M   G                         V  DD +          Y  LI + 
Sbjct: 537 MVLDAMRGQG-------------------------VALDDFA----------YRKLIVSM 561

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
              GR+ +A AM + M+ RG LPD ST   L
Sbjct: 562 SHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G +  V++ N ++  + + G       + ++M+ R ++ ++ +++ +++ LC+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A  + ++M++ G+   VVTYN L+ G CK G   K      + KDMV   I+PN +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVI 299

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN L+D F K+  +  A ++++EM + GI+  ++TYN+L++G C+  +L EA  + D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           + +   P++VT  +LI G+C  K V+    +F +IS++GL  + +TY+ L+  +C+ G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +   M+  GVLPDV TY  L+ GL   G +E    I  +L  + M  G+V Y  +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A +L      +  +   PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 480 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  +    +  G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDG 557



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 200/355 (56%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+  I                    FK     G+KSSV++ N L+R L K G
Sbjct: 232 STIIDSLCRDGCI--------------DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K+ D   + K+M  R I  N+ +FN +L+   K GKL +A+++ ++M + G+SP ++TYN
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC +    ++ +A+ +   MV N   P+ VTF +LI G+C  + +   MKVF  +
Sbjct: 338 TLMDGYCMQN---RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+ A  VTY+ L+ G C  GK+  A  L  EM++ G+ P+V+T   L++G C    +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +F+D+ +  +   ++ Y T+I+  CK G++EDA+ +  S+  +GV P+V TY  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+GL ++G++     ++ ++  +G      TYN L+ A  +DG    +  L++EM
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 217/384 (56%), Gaps = 14/384 (3%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  +  ++  +  +K+ V + + ++ +L ++G  +    ++KEM+ + I+ ++ ++N ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLCKAGK N  + +++DM S  + P V+T+N+L+D + K+   GK+ +A+ ++K+M+  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE---GKLQEANELYKEMITR 327

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI PN +T+NTL+DG+C    +S A  + + M  +  +  +VT+ SLI G C+  ++D+ 
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +   +   GL  N VT + L+ GFC+   ++ A  LF ++   G+ P V+TY  L+D 
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447

Query: 374 YCKEGRMEDAFA----MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            C  G++E A      ++ S +D G++     Y  +I G+ + G VE   N+   L   G
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  ++TY +++  LCK G   +A  LL    KME++   PN  TYN LI+   + G L 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
            +  L+ E+   G   + ++ ++V
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMV 584



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 203/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++   A+ +  +F  V    K+++   I  N+ + N ++N  C+  K   A  ++
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P   T+N LI G   +G   K+ +A  +   MVENG  P+ VT+N++++G 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEG---KVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  + S A+ +  +M    + A V TY+++I+ LC DG +D A++L  EM   G+K +V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N+L+ G CK        +L  D+  + + P+VIT+N L+D + KEG++++A  +   
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ RG+ P++ TYN L+ G   +  +    N+++ +V N     +VT+  L+   C   +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
               + +      + K     N VTY++L++GFCQ GK++ A  L  E++  G++P+  T
Sbjct: 384 VDDGMKVFRN---ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 510 YQIVREEMMEKG 521
           Y I+ + + + G
Sbjct: 441 YGILLDGLCDNG 452



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 11/340 (3%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC---- 232
           M +R I  N+ +   +   L K G L   +D++  + S   S +    +I     C    
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLR--TDLLCTISSFFSSCERDFSSISNGNVCFRER 59

Query: 233 KKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            + GI  + K DA+  F++M+ +  LP+ V F+       + +  +  +   +++  +GI
Sbjct: 60  LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A  + T N +IN  C   K   A ++  ++M  G +P+  T N LI G   +  V +A V
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D + E G  P V+TYN++++  C+ G    A  +   M +R V  DV TY+ +I  L 
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R+G ++   ++  E+   G+++ +VTYN LV  LCK GK      LL +M   E     P
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVP 296

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N++T+NVL+  F ++GKL++AN L  E++ +G+ PN  TY
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 211/377 (55%), Gaps = 9/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+       N L+R +++ GK      ++ EM RR +   + +FN +++G+CKA  LN
Sbjct: 237 DAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLN 296

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ +   M   GV+P V TY   + G CK G   ++  A  +F++M E G+ PN V F 
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAG---RIQDAVEMFEEMRERGVNPNTVVFT 353

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLID  CK+ N++A +++  EM + GI   +V YN+L NGLC    L  A  + +EM  +
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNN 413

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKP+ VT   LI+GFCK+  ++ A  +  ++S++G++   +TY TLI    K GR  D+
Sbjct: 414 GLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDS 473

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++ G+ PD +TY  +I    +  +V+    ++ E+ N G + G+VTYN+++  
Sbjct: 474 ERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNG 533

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C  G+ K A  LL+ M  +      P+ +TYN+L+ G C+ GK+ DA  L +    KG+
Sbjct: 534 FCILGQMKNADMLLNAMLNI---GVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGM 587

Query: 504 IPNQTTYQIVREEMMEK 520
           + +   Y  +  E ++K
Sbjct: 588 VSDFGLYTSLINEFVKK 604



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 189/340 (55%), Gaps = 6/340 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            FN ++  + ++GKL  A ++ ++M   GV P VVT+N L+ G CK   +     A+A+ 
Sbjct: 246 QFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNS---ANALR 302

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M + G+ P+  T+   + G CK   I  A+++FEEM   G+    V + +LI+  C +
Sbjct: 303 GLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKE 362

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +   + L  EM   G+K ++V  NAL NG C+ + ++ A  + +++   GL P  +TY
Sbjct: 363 GNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTY 422

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TLID +CKEG ++ A  M+  M D GV  D  TY  LI+GLS+ G       I+ E++ 
Sbjct: 423 TTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMME 482

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+     TY +++ A CK+   K    LL EM   + + + P +VTYNV++ GFC  G+
Sbjct: 483 AGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEM---QNKGRKPGVVTYNVVMNGFCILGQ 539

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +++A+ LLN +L  G+ P+  TY I+ +   + G + D E
Sbjct: 540 MKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE 579



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 154/272 (56%), Gaps = 3/272 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A A +  +++ G+ P    FN L+    +   +++A  +F+EM   G+   VVT+N+L+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G+C    L+ A ALR  M  +G+ P+V T  A + G CK   ++ A  +F+++ E+G++
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ + + TLIDA+CKEG +     +   M  RG+  D+  YN L  GL R  +++   +I
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+ NNG++   VTY  L+   CK+G+   A+ +  E   M  E    + VTY  LI G
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE---MSDEGVALDEVTYTTLISG 463

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             + G+  D+  +L E++E GL P+ TTY +V
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMV 495



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 179/339 (52%), Gaps = 5/339 (1%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            +MLM   +++ K       F      G+  +V++ N L+  + K         +   M 
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           +  +  ++ ++   + GLCKAG++  A ++ E+M+  GV+P  V +  LID +CK+G + 
Sbjct: 307 KAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVA 366

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              +   + ++M   GI  + V +N L +G C+  ++ AA  + EEM ++G+    VTY 
Sbjct: 367 AGLE---LHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYT 423

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDISE 357
           +LI+G C +G+LD A+ ++ EM   G+  + VT   LI+G  K  + V+  R+L  ++ E
Sbjct: 424 TLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILC-EMME 482

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            GL P   TY  +IDA+CK   ++  F +   M ++G  P V TYN ++ G    G ++ 
Sbjct: 483 AGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKN 542

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
              ++N ++N G+    +TYNIL+   CK GK + A  L
Sbjct: 543 ADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 147/270 (54%), Gaps = 6/270 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+   + G+  + +    L+ A  KEG       +++EM  R I+ +L ++N + NGL
Sbjct: 335 EMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGL 394

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+   L  A+DI+E+M++ G+ P  VTY  LIDG+CK+   G++  A  + ++M + G+ 
Sbjct: 395 CRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKE---GELDMAMEMKQEMSDEGVA 451

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            +EVT+ TLI G  K      + ++  EM   G+     TY  +I+  C +  +     L
Sbjct: 452 LDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKL 511

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM   G KP VVT N ++NGFC    ++ A +L + +   G+ P  ITYN L+D +CK
Sbjct: 512 LKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCK 571

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            G++ DA  ++++   +G++ D   Y  LI
Sbjct: 572 HGKVRDAEELKSA---KGMVSDFGLYTSLI 598



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 142/311 (45%), Gaps = 33/311 (10%)

Query: 245 AVFKDMVENGILPN--------------EVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           AV K   + G+LP+               V      D   +  ++  A   + ++   G+
Sbjct: 181 AVAKAYADEGLLPDGCSLLLLLALRRGVRVPLPAWSDLMNRLPSVPEAYAFYLQLLDAGV 240

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                 +N L+  +   GKL  A  + DEM+  G+ P VVT N L++G CK   +  A  
Sbjct: 241 PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANA 300

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L   +++ G++P V TY   +   CK GR++DA  M   M +RGV P+   +  LI    
Sbjct: 301 LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHC 360

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           +EGNV     +  E+   G++  LV YN L   LC+    K A  +++E   M      P
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEE---MRNNGLKP 417

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------------- 515
           + VTY  LI GFC++G+L+ A  +  E+ ++G+  ++ TY  +                 
Sbjct: 418 DKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERIL 477

Query: 516 -EMMEKGFIPD 525
            EMME G  PD
Sbjct: 478 CEMMEAGLEPD 488



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 149/294 (50%), Gaps = 8/294 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           +F+    K G+      +F  +      +  N+++   L+ A+ K      G E  +   
Sbjct: 319 AFMQGLCKAGRIQDAVEMFEEMR--ERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMA 376

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+K+ +++ N L   L +    +    + +EM+   ++ +  ++  +++G CK G+L+
Sbjct: 377 TRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELD 436

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ ++M   GV+   VTY  LI G  K    G+   ++ +  +M+E G+ P+  T+ 
Sbjct: 437 MAMEMKQEMSDEGVALDEVTYTTLISGLSKS---GRSVDSERILCEMMEAGLEPDNTTYT 493

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +ID FCK+ ++    K+ +EM + G   GVVTYN ++NG C+ G++  A  L + M+  
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNI 553

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           G+ P+ +T N L++G CK   V  A  L    S +G+      Y +LI+ + K+
Sbjct: 554 GVCPDDITYNILLDGHCKHGKVRDAEEL---KSAKGMVSDFGLYTSLINEFVKK 604


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 8/383 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL++ V +   L+  L K  +FE  E +  EM       +  + + +++GL K G +  A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  +K  GV+P +  YN LI+  CK G   K+ +A+++F +M   G+ PN+VT++ L
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDG---KLDEAESLFNNMGHKGLFPNDVTYSIL 396

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID FCK   +  A+    +M   GI A V  Y+SLI+G C  GKL  A +L DEM+A+GL
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNVV   +LI+G+CK+  +  A  L+ +++ +G+SP+  T+  LI   C   RM +A  
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M++  V+P+  TYN LI G  +EGN      +++E+V  G+     TY  L+  LC
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 446 KDGKSKKAVSLLDEMFKMEK-----EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             G+  +A   ++++   ++     E   PN+VTY  LI G C+ G ++ A  L  E+L 
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636

Query: 501 KGLIPNQTTYQIVREEMMEKGFI 523
              +PNQ TY    + +  +G I
Sbjct: 637 SNSLPNQNTYACFLDYLTSEGNI 659



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 219/439 (49%), Gaps = 42/439 (9%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L   K  +   G E      ++G   S  + + L+  L K+G       +  ++K+  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +L  +N ++N +CK GKL++A  +  +M   G+ P  VTY+ILID +CK+G   K+ 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRG---KLD 407

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A      M E GI      +++LI G CK   + AA  +F+EM ++G+   VV Y SLI
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C +G+L  A  L  EM   G+ PN  T  ALI+G C    + +A  LF ++ E  + 
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN LI+ +CKEG    AF + + M+++G++PD  TY  LI+GL   G V   R  
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 422 MNELVNN--------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF------------ 461
           MN+L           G    +VTY  L+  LCK G   KA  L  EM             
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647

Query: 462 ----------KMEK---------EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                      +EK         E    N VTYN+LI+GFC+ G++++A  +L  +++ G
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707

Query: 503 LIPNQTTYQIVREEMMEKG 521
           + P+  +Y  +  E   +G
Sbjct: 708 ISPDCISYSTIIYEYCRRG 726



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 224/435 (51%), Gaps = 17/435 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++   K+GK     ++F+ +      L  N +   +L+ ++ K  K  +      +  
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMG--HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+K++V   + L+    K GK    + ++ EM    ++ N+  +  +++G CK G+L+
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +  +M   G+SP   T+  LI G C      +M +A+ +F +MVE  ++PNEVT+N
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHAN---RMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+G CK+ N   A ++ +EM   G+     TY  LI+GLC  G++ EA    +++   
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 324 --------GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                   G  PNVVT  ALING CK  L++KA +L  ++      P+  TY   +D   
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 654

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
            EG +E A  + + +L+ G L +  TYN LI G  + G ++    ++  ++++G+    +
Sbjct: 655 SEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           +Y+ ++   C+ G  K+A+ L + M         P+ V YN LI G C  G+L  A  L 
Sbjct: 714 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVN---PDTVAYNFLIYGCCVTGELTKAFELR 770

Query: 496 NELLEKGLIPNQTTY 510
           ++++ +G+ PN+ TY
Sbjct: 771 DDMMRRGVKPNRATY 785



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 276/584 (47%), Gaps = 62/584 (10%)

Query: 2   FCSANST--IEDITELIR-NHHWSKLKNTD-------PNTVILQLFNSDADPVLILRYFC 51
           FC++  +  +  +T+++R N  W    N         P+ V   L  +  D  L LR+F 
Sbjct: 22  FCASPDSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFN 81

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV-----KNGKFTSVSTIFHALS 106
           +        HS      L+H+LV +  Y    S L   +       G F S      +  
Sbjct: 82  FLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFES---FLDSYR 138

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            C+ S    ++  D+L+  YV+N +   G    +   D G+   + + + +L  L++  +
Sbjct: 139 KCNFS---TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQ 195

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F    +++ E+    +  ++  +  V+  LC+     +A +++  M+S G    V TYN+
Sbjct: 196 FRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNV 255

Query: 227 LIDGYCK----------------KG-------------GIGKMYKADA---VFKDMVENG 254
            I G CK                KG             G+ K+ + +A   +  +M+E G
Sbjct: 256 FIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            +P+E   + L+DG  K  NI +A  +  ++   G+A  +  YN+LIN +C DGKLDEA 
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L + M   GL PN VT + LI+ FCK+  ++ A      ++E G+  +V  Y++LI  +
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G++  A ++ + M+  G+ P+V  Y  LI+G  +EG +     + +E+   G+    
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDA 491
            T+  L+  LC   +  +A  L  EM       +W   PN VTYNVLI+G C++G    A
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMV------EWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             LL+E++EKGL+P+  TY+ +   +   G + +    M ++ G
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 224/461 (48%), Gaps = 66/461 (14%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+   +   +G+  S+   N L+ ++ K+GK ++ E ++  M  + +  N  +++ +++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK GKL+ A   +  M  +G+   V  Y+ LI G+CK   +GK+  A ++F +M+ NG
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK---LGKLRAAKSLFDEMIANG 455

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN V + +LI G+CK+  +  A +++ EM   GI+    T+ +LI+GLC   ++ EA 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP------------ 362
            L  EM+   + PN VT N LI G CK+    +A  L D++ E+GL P            
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 363 -------------------------------SVITYNTLIDAYCKEGRMEDAFAMRNSML 391
                                          +V+TY  LI+  CK G M+ A  +   ML
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
               LP+ +TY C +  L+ EGN+E    + + L+  G  A  VTYNIL+   CK G+ +
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQ 694

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  +L  M         P+ ++Y+ +I  +C++G L++A  L   +L +G+ P+   Y 
Sbjct: 695 EAAEVLVNMIDSGIS---PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751

Query: 512 I----------------VREEMMEKGFIPDIEGHMYNISGT 536
                            +R++MM +G  P+   +   I GT
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 792



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 170/342 (49%), Gaps = 45/342 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +V+    L+    KEG+  +   +Y EM  + I  N  +F  +++GLC A ++ +A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +  +M    V P  VTYN+LI+G+CK+G   + ++   +  +MVE G++P+  T+  L
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE---LLDEMVEKGLVPDTYTYRPL 571

Query: 266 IDGFCKDENISAAMKVFEEMGSH--------GIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           I G C    +S A +   ++           G    VVTY +LINGLC  G +D+A  L 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631

Query: 318 DEMMAS----------------------------------GLKPNVVTSNALINGFCKKK 343
            EM+AS                                  G   N VT N LI GFCK  
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 691

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A  +  ++ + G+SP  I+Y+T+I  YC+ G +++A  +  SML+RGV PD   YN
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            LI G    G +     + ++++  G++    TYN L+   C
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++N ++ G CK G++ +A++++ +M   G+SP  ++Y+ +I  YC++G + +  K  
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK-- 733

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +++ M+  G+ P+ V +N LI G C    ++ A ++ ++M   G+     TYNSLI+G 
Sbjct: 734 -LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 792

Query: 305 CV 306
           C+
Sbjct: 793 CL 794



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  ++ ++ N L+R   K G+ ++   V   M    I  +  S++ ++   C+ G L +A
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M + GV+P  V YN LI G C  G   ++ KA  +  DM+  G+ PN  T+N+L
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTG---ELTKAFELRDDMMRRGVKPNRATYNSL 788

Query: 266 IDGFCKDENISAAMKVF 282
           I G C   ++S+    F
Sbjct: 789 IHGTCLMSSVSSTADYF 805


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 213/377 (56%), Gaps = 10/377 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   +    L+  L K G+      + + +    ++ N+  ++ +++G+CK   +N A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M S G+SP VVTY+ LI G+     +G++  A  +F  M+   I P+  TFN L
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFT---VGQLKDAIDLFNKMILENIKPDVYTFNIL 273

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DGFCKD  +     VF  M   GI   VVTY SL++G C+  ++++A ++   M   G+
Sbjct: 274 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV 333

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ + N LI+GFCK K V++A  LF ++  + + P V+TYN+LID  CK G++  A  
Sbjct: 334 NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALK 393

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRGV PD+ TY+ ++  L +   V+    ++ +L + G+R  + TY IL+  LC
Sbjct: 394 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLC 453

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIV--TYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K G+ + A ++ +++       K  NI   TY V+I GFC KG  ++A  LL+++ +   
Sbjct: 454 KGGRLEDAHNIFEDLL-----VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC 508

Query: 504 IPNQTTYQIVREEMMEK 520
           IP+  TY+I+   + +K
Sbjct: 509 IPDAVTYEIIIRSLFDK 525



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 210/376 (55%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   + ++   L++ L  +G+       +  +     +L+   +  +++GLCK G+   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  +    V P VV Y+ +IDG CK   +   +    ++ +MV  GI PN VT++ L
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD---LYSEMVSKGISPNVVTYSAL 238

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF     +  A+ +F +M    I   V T+N L++G C DGK+ E   +   MM  G+
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNVVT  +L++G+C  K V KA+ +   +S++G++P + +YN LID +CK  ++++A  
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + ++PDV TYN LI GL + G +     +++E+ + G+   ++TY+ ++ ALC
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+ +  KA++LL    K++ +   PN+ TY +LI G C+ G+LEDA+ +  +LL KG   
Sbjct: 419 KNHQVDKAIALLT---KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI 475

Query: 506 NQTTYQIVREEMMEKG 521
              TY ++      KG
Sbjct: 476 TVNTYTVMIHGFCNKG 491



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 245/475 (51%), Gaps = 46/475 (9%)

Query: 72  SLVVAKKYPKIRSFLHMFVKNGKF-----TSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           S  V KK+    SF   F+KN  F     +S    F   S+ S +   N+ ++D      
Sbjct: 11  SYFVPKKF---HSF--QFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVD------ 59

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI---- 182
                    F  F R          +  N++L +LVK   +  V  + ++M+   I    
Sbjct: 60  --------AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVL 111

Query: 183 ------------ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
                         N  +F  ++ GLC  G++++A    +++ ++G     V Y  LI G
Sbjct: 112 FHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHG 171

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            CK   +G+   A  + + +  N + PN V ++T+IDG CKD++++ A  ++ EM S GI
Sbjct: 172 LCK---VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           +  VVTY++LI+G    G+L +A+ L ++M+   +KP+V T N L++GFCK   +++ + 
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +F  + +QG+ P+V+TY +L+D YC    +  A ++  +M  RGV PD+ +YN LI G  
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           +   V+   N+  E+ +  +   +VTYN L+  LCK GK   A+ L+DE   M      P
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE---MHDRGVPP 405

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +I+TY+ ++   C+  +++ A  LL +L ++G+ PN  TY I+ + + + G + D
Sbjct: 406 DIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 205/370 (55%), Gaps = 7/370 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  +R     ++ +V+  + ++  + K+    D   +Y EM  + I  N+ +++ +++
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G    G+L  A D+   M    + P V T+NIL+DG+CK G   KM +   VF  M++ G
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG---KMKEGKTVFAMMMKQG 297

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I PN VT+ +L+DG+C  + ++ A  +   M   G+   + +YN LI+G C   K+DEA+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + P+VVT N+LI+G CK   +  A  L D++ ++G+ P +ITY++++DA 
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  +++ A A+   + D+G+ P++ TY  LI GL + G +E   NI  +L+  G    +
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY +++   C  G   +A++LL    KM+     P+ VTY ++I+    K + + A   
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLS---KMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK- 533

Query: 495 LNELLEKGLI 504
           L E++ +GL+
Sbjct: 534 LREMITRGLL 543



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 190/351 (54%), Gaps = 17/351 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  D +C++  + D               F+ +      G+  +V++ + L+      G
Sbjct: 201 STIIDGMCKDKHVND--------------AFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           + +D   ++ +M    I+ ++ +FN +++G CK GK+ +   +   M   G+ P VVTY 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC    + ++ KA ++   M + G+ P+  ++N LIDGFCK + +  AM +F+EM
Sbjct: 307 SLMDGYCL---VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               I   VVTYNSLI+GLC  GK+  A+ L DEM   G+ P+++T +++++  CK   V
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA  L   + +QG+ P++ TY  LID  CK GR+EDA  +   +L +G    V+TY  +
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVM 483

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           I G   +G  +    +++++ +N      VTY I++ +L    ++ KA  L
Sbjct: 484 IHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 208/369 (56%), Gaps = 10/369 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V +   ++ AL  E +  +     +EM  R +  N+ ++  +++GLCK G++++A
Sbjct: 41  GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M+   V P  VTYN LI G CK     + Y    + ++MV +G +P+  T+ TL
Sbjct: 101 VALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYD---LLEEMVYSGCIPDIFTYTTL 156

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG- 324
           I GFCK +    A++VFE++ + G    VVTY+ LI+GLC +G+L EA+ L   M+ SG 
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             PN VT N+LI+GFC+   +++A  L + ++E G SP V+TY TL++ +CK  R++DA+
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M  +G+ PDV T+  L+ GL RE  +    +I+ E+        + TYN ++   
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+  + ++A       F +E+    PN+V++N++I+G C+  +  +A  L+ E   +   
Sbjct: 337 CRANQLEEA-----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 505 PNQTTYQIV 513
           P+   Y  V
Sbjct: 392 PDVVMYTTV 400



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 197/361 (54%), Gaps = 14/361 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K  +  +   + +EM       ++ ++  ++ G CK+ K + A  + E + +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDE 273
            G  P VVTY+ LIDG CK+G   ++ +A  +F  M+++G  +PN VT+N+LI GFC+  
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEG---RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  AM + E M   G +  VVTY +L+NG C   +LD+A  L ++M   GL P+VVT  
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +L++G C++  +  A  +  ++  +  SP+V TYNT++D YC+  ++E+A   R  ML+ 
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEE 352

Query: 394 -GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
               P+V ++N +I GL +         ++ E         +V Y  ++  LC++ K  +
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  +  +M  +E+    PN +TY+ LI G C  G L+ A G     +EKG +PN  TY +
Sbjct: 413 ACRVYRKM--LEEPGCLPNSITYSTLITGLCNAGMLDRARG----YIEKGCVPNIGTYNL 466

Query: 513 V 513
           +
Sbjct: 467 L 467



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 174/327 (53%), Gaps = 8/327 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++ GLCK  +L +A   +  M S G  P V TY  +I   C +    ++++A    
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVE---NRLHEARKFL 69

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M    + PN VT+  LIDG CK   +  A+ +  +M    +    VTYNSLI+GLC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA-VTYNSLISGLCKA 128

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +  EA  L +EM+ SG  P++ T   LI GFCK K  + A  +F+ +  +G  P V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + LID  CKEGR+++A  +   M+  G  +P+  TYN LI+G  R G ++   N++  + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G    +VTY  L+   CK  +   A  LL++   M ++   P++VT+  L+ G C++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ---MTRKGLTPDVVTFTSLMDGLCREN 305

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L DA  +L E+  K   P   TY  +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTI 332



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 170/309 (55%), Gaps = 8/309 (2%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           S   VTY  LI G CK   + ++ +A      MV  G  P+  T+  +I   C +  +  
Sbjct: 8   SADFVTYTSLIQGLCK---VKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A K  EEM +  +   VVTY  LI+GLC  G++DEAVAL  +M    + P  VT N+LI+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK +   +A  L +++   G  P + TY TLI  +CK  + +DA  +   ++ RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDGKSKKAVSL 456
           DV TY+CLI GL +EG ++   ++   ++ +G      VTYN L+   C+ GK  +A++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L+   +M +    P++VTY  L+ GFC+  +L+DA  LLN++  KGL P+  T+  + + 
Sbjct: 244 LE---RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 517 MMEKGFIPD 525
           +  +  + D
Sbjct: 301 LCRENRLSD 309



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 147/283 (51%), Gaps = 19/283 (6%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+ +LI G CK + +  A+    +M S G    V TY ++I+ LCV+ +L EA    +E
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M    L PNVVT   LI+G CK   V++A  L   + ++ + P+ +TYN+LI   CK  R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
             +A+ +   M+  G +PD+ TY  LI G  +    +    +  +LV  G R  +VTY+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LCK+G+ K+A+ L   M K       PN VTYN LI GFC+ GK+++A  LL  + 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIK--SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 500 EKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
           E G  P+  TY  +                  +M  KG  PD+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 16/332 (4%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+   LV     P + ++   +    K G+      +F  +   S S   N++  + L+ 
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLIS 229

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +  K        +R  + G    V++   L+    K  + +D   +  +M R+ +  
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ +F  +++GLC+  +L+ A  I+ +M+    SP V TYN ++DGYC+   +      +
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL------E 343

Query: 245 AVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
              K M+E     PN V+FN +I G CK    S AM++ EE         VV Y ++I+G
Sbjct: 344 EARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDG 403

Query: 304 LCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           LC + K+DEA  +  +M+   G  PN +T + LI G C   ++++AR       E+G  P
Sbjct: 404 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVP 459

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           ++ TYN LIDA+ K  R EDA  + + M+ RG
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++    S   +TY +LI   CK  R+E A      M+ +G  PDV TY  +I  L  E  
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   R  + E+ N  +   +VTY +L+  LCK G+  +AV+LL +M    ++K  P  VT
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM----RKKCVPTAVT 117

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           YN LI G C+  +  +A  LL                   EEM+  G IPDI  +   I+
Sbjct: 118 YNSLISGLCKAERASEAYDLL-------------------EEMVYSGCIPDIFTYTTLIT 158

Query: 535 G 535
           G
Sbjct: 159 G 159


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/365 (34%), Positives = 204/365 (55%), Gaps = 7/365 (1%)

Query: 150 SVLSCNQLLRALVKEGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           +V+  N L+   V+ G+  E   +VY +M       ++ +F+ ++NGLCK G    A ++
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           + DM + G  P + TY ILIDG+CKKG   ++ +A  + ++M+  G   N V +N LI  
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKG---QLEEAGLILREMLTKGFSLNTVGYNALISA 461

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK   I  A+ +F EM S G    + T+NSLI GLC   ++++A+AL  +M+  G+  N
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT N LI+ F ++  +++A  L +D+  +G     ITYN LI A CK G +E    +  
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+ +G+ P + T N LI G    G V      M ++++ G    +VTYN L+  LCK G
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           + ++A++L +   K++ E   P+ +TYN LI   C++G  +DA  LL   +E G +PN  
Sbjct: 642 RIQEALNLFE---KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDV 698

Query: 509 TYQIV 513
           T+ I+
Sbjct: 699 TWNIL 703



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 194/358 (54%), Gaps = 23/358 (6%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMED-MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           N+  FN ++NG  + G+LN+A+  + D M + G  P V T++ L++G CKKG  G    A
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS---A 401

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +  DM   G  PN  T+  LIDGFCK   +  A  +  EM + G +   V YN+LI+ 
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISA 461

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  GK+ EA+ +  EM + G KP++ T N+LI G C+   +E A  L+ D+  +G+  +
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +T+NTLI A+ + G +++A  + N ML RG   D  TYN LI  L + G VE    +  
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E++  G+   ++T NIL+   C  GK   A+  + +M         P+IVTYN LI G C
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFS---PDIVTYNSLINGLC 638

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVRE-----------EMMEKGFIPD 525
           ++G++++A  L  +L  +G+ P+  TY      + RE             +E GF+P+
Sbjct: 639 KRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 204/401 (50%), Gaps = 19/401 (4%)

Query: 61  HSLLLTGRLLHSLVVAKKYP-----KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
           H L  T R+  +  +  K P        + ++ FV+NG+    +   +      D +  N
Sbjct: 323 HGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVY------DKMINN 376

Query: 116 SIIIDMLMLAYVKN--MKPHLGFEAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDV 170
             + D+   + + N   K  L   A +   D    G K ++ +   L+    K+G+ E+ 
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             + +EM  +   LN   +N +++ LCK GK+++A D+  +M S G  P + T+N LI G
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            C+   + +M  A A+++DMV  G++ N VTFNTLI  F +   I  A+K+  +M   G 
Sbjct: 497 LCR---VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC 553

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               +TYN LI  LC  G +++ + L +EM+  GL P+++T N LINGFC    V  A  
Sbjct: 554 PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALE 613

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
              D+  +G SP ++TYN+LI+  CK GR+++A  +   +   G+ PD  TYN LI  L 
Sbjct: 614 FMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           REG  +    ++   V NG     VT+NILV    K   S+
Sbjct: 674 REGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 193/339 (56%), Gaps = 11/339 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-V 246
           ++ ++++GLCK  ++++A  ++  +      P VV +N L++G+ + G   ++ +A A V
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNG---RLNEATAFV 369

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +  M+ NG +P+  TF+TL++G CK     +A+++  +M + G    + TY  LI+G C 
Sbjct: 370 YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCK 429

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G+L+EA  +  EM+  G   N V  NALI+  CK   + +A  +F ++S +G  P + T
Sbjct: 430 KGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFT 489

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N+LI   C+   MEDA A+   M+  GV+ +  T+N LI    R G ++    ++N+++
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G     +TYN L+ ALCK G  +K + L +EM    ++   P+I+T N+LI GFC  G
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI---RKGLTPSIITCNILINGFCTAG 606

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           K+ +A   + +++ +G  P+  TY  +   + ++G I +
Sbjct: 607 KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQE 645



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 194/394 (49%), Gaps = 21/394 (5%)

Query: 137 EAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           E FK AG   G   S      L+  L     F+ ++ +  +MK   I      F  ++  
Sbjct: 89  EIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKY 148

Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYNILID----GYCKKGGIGKMYKADAVFKDM 250
             +AG   +A+ ++ DMK +    P   +YN+++D    G C          A  VF DM
Sbjct: 149 YGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPS-------VASNVFYDM 201

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +  G+ PN+ TF  ++   C    +  A  +  +M  HG     + Y +LI+ L    ++
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           DEA+ L +EM   G  P+V T N +I GFC+   V +   L D +  +G +P+ +TY  L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNIMNELVNNG 429
           +   CK  R+++A     ++L +   P+V  +N L+ G  R G + E    + ++++NNG
Sbjct: 322 MHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               + T++ LV  LCK G    A+ L+++   M+ +   PN+ TY +LI GFC+KG+LE
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVND---MDAKGCKPNLNTYTILIDGFCKKGQLE 434

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +A  +L E+L KG   N   Y  +   + + G I
Sbjct: 435 EAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 40/303 (13%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K G+      I   + T   SL  N++  + L+ A  K+ K H   + F      G K
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSL--NTVGYNALISALCKHGKIHEALDMFGEMSSKGCK 484

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEM--------------------KRRRIE----- 183
             + + N L+  L +  + ED   +Y++M                    +R  I+     
Sbjct: 485 PDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKL 544

Query: 184 ----------LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
                     L+  ++N ++  LCK G + K   + E+M   G++P ++T NILI+G+C 
Sbjct: 545 VNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCT 604

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G   K++ A    +DM+  G  P+ VT+N+LI+G CK   I  A+ +FE++ + GI   
Sbjct: 605 AG---KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            +TYN+LI  LC +G  D+A  L    + +G  PN VT N L+  F K+   E   + + 
Sbjct: 662 SITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYA 721

Query: 354 DIS 356
             S
Sbjct: 722 QFS 724



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +  R+L D        PS  +YN ++D          A  +   ML +GV P+  T+  +
Sbjct: 157 QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLV 216

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           +  L     V+    ++ ++  +G     + Y  L+ AL K  +  +A+ LL+EMF M  
Sbjct: 217 MKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGC 276

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
               P++ T+N +I GFC+  ++ +   L++ ++ KG  PN  TY  +   + +   I +
Sbjct: 277 P---PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDE 333

Query: 526 IEGHMYNISG 535
            +  +  + G
Sbjct: 334 AQALLSKVPG 343


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 214/398 (53%), Gaps = 32/398 (8%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L  S  S + LL AL     F     ++ +M R R+ L   +FN +L  LC AGK  +A 
Sbjct: 6   LPISTASLHPLLSALPSAPAFA----LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 61

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTL 265
           +++  M      P  VTYN +I G+C +G   ++  A  + ++M E G I PN+ T+ T+
Sbjct: 62  ELLRQMPR----PNAVTYNTVIAGFCSRG---RVQAALDIMREMRERGGIAPNQYTYGTV 114

Query: 266 IDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           I G+CK   +  A+KVF+EM + G +    V YN+LI G C  GKLD A+  RD M+  G
Sbjct: 115 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 174

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +   V T N L++         +A  L +++  +GL+P V TYN LI+ +CKEG ++ A 
Sbjct: 175 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 234

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  +M  RGV   V TY  LI  LS++G V+    + +E V  G+R  LV YN L+ + 
Sbjct: 235 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 294

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              G   +A  ++ EM   EK++  P+ VTYN L++G C  G++++A  L++E+ ++G+ 
Sbjct: 295 STSGNIDRAFEIMGEM---EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDI 526
           P+  TY                  +R EMM KGF P +
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 389



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 214/399 (53%), Gaps = 28/399 (7%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +LR L   GK      + ++M R     N  ++N V+ G C  G++  A DIM +M+ 
Sbjct: 45  NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 100

Query: 215 LG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKD 272
            G ++P   TY  +I G+CK   +G++ +A  VF +M+  G + P  V +N LI G+C  
Sbjct: 101 RGGIAPNQYTYGTVISGWCK---VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A+   + M   G+A  V TYN L++ L +DG+  EA  L +EM   GL P+V T 
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LING CK+  V+KA  +F+++S +G+  +V+TY +LI A  K+G++++   + +  + 
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG+ PD+  YN LI   S  GN++    IM E+    +    VTYN L+  LC  G+  +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L+DEM    K    P++VTYN LI G+  KG ++DA  + NE++ KG  P   TY  
Sbjct: 338 ARKLIDEM---TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394

Query: 513 VRE----------------EMMEKGFIPDIEGHMYNISG 535
           + +                EM+E G  PD   ++  I G
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 45/403 (11%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSF 189
           KP    E  ++      + + ++ N ++      G+ +    + +EM+ R  I  N  ++
Sbjct: 56  KPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 111

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGI----------- 237
             V++G CK G++++A  + ++M + G V P+ V YN LI GYC +G +           
Sbjct: 112 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 171

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                G+  +A  + ++M   G+ P+  T+N LI+G CK+ N+ 
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 231

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+++FE M   G+ A VVTY SLI  L   G++ E   L DE +  G++P++V  NALI
Sbjct: 232 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N       +++A  +  ++ ++ ++P  +TYNTL+   C  GR+++A  + + M  RG+ 
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TYN LI+G S +G+V+    I NE++N G    L+TYN L+  LCK+G+   A ++
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 411

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           + EM    +    P+  TY  LI+G       ED   + +E L
Sbjct: 412 VKEMV---ENGITPDDSTYISLIEGLTT----EDERAIDDERL 447



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 138/255 (54%), Gaps = 5/255 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H    +G+ T    +   +      L  +    ++L+  + K        E F+    
Sbjct: 185 LVHALFMDGRGTEAYELVEEMG--GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++++V++   L+ AL K+G+ ++ + ++ E  RR I  +L  +N ++N    +G +++
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +IM +M+   ++P  VTYN L+ G C    +G++ +A  +  +M + GI P+ VT+NT
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCL---LGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+    ++  A+++  EM + G    ++TYN+LI GLC +G+ D+A  +  EM+ +G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 325 LKPNVVTSNALINGF 339
           + P+  T  +LI G 
Sbjct: 420 ITPDDSTYISLIEGL 434



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG-----FEA 138
           S ++   K G+      +F       D   R  I  D+++   + N     G     FE 
Sbjct: 254 SLIYALSKKGQVQETDKLF-------DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
                   +    ++ N L+R L   G+ ++   +  EM +R I+ +L ++N +++G   
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G +  A  I  +M + G +P ++TYN LI G CK G   +   A+ + K+MVENGI P+
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG---QGDDAENMVKEMVENGITPD 423

Query: 259 EVTFNTLIDGFCK-------DENISAA 278
           + T+ +LI+G          DE ++AA
Sbjct: 424 DSTYISLIEGLTTEDERAIDDERLAAA 450


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 236/453 (52%), Gaps = 19/453 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCS-DSLCRNSIIIDMLMLAYV 127
           L   L V + + + +S + + V      S S++F +L       +C    ++D LM+ Y 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMC--GFLVDALMITYT 181

Query: 128 KNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
                 LGF     + F+ +  +     +  C  LL  ++K      +   Y E+     
Sbjct: 182 D-----LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGF 236

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
            LN+  FN ++N  CK G ++ A  + +++    + P VV++N LI+GYCK G + + ++
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
                  M ++   P+  T++ LI+  CK+  +  A  +F+EM   G+    V + +LI+
Sbjct: 297 LK---HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G   +G++D       +M++ GL+P++V  N L+NGFCK   +  AR + D +  +GL P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
             ITY TLID +C+ G +E A  +R  M   G+  D   ++ L+ G+ +EG V      +
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E++  G++   VTY +++ A CK G ++    LL E   M+ +   P++VTYNVL+ G 
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE---MQSDGHVPSVVTYNVLLNGL 530

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           C+ G++++A+ LL+ +L  G++P+  TY  + E
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 185/338 (54%), Gaps = 6/338 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   +V   N L+    KEG   D + V+ E+ +R ++  + SFN ++NG CK G L+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +   M+     P V TY+ LI+  CK+    KM  A  +F +M + G++PN+V F 
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKEN---KMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI G  ++  I    + +++M S G+   +V YN+L+NG C +G L  A  + D M+  
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P+ +T   LI+GFC+   VE A  +  ++ + G+    + ++ L+   CKEGR+ DA
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 ML  G+ PD  TY  ++    ++G+ +    ++ E+ ++G    +VTYN+L+  
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           LCK G+ K A  LLD M  +      P+ +TYN L++G
Sbjct: 530 LCKLGQMKNADMLLDAMLNI---GVVPDDITYNTLLEG 564



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 165/295 (55%), Gaps = 6/295 (2%)

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L+D   K    G ++     + ++++ G   N   FN L++ FCK+ NIS A KVF+E+ 
Sbjct: 211 LLDRMMKLNPTGTIW---GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   VV++N+LING C  G LDE   L+ +M  S  +P+V T +ALIN  CK+  ++
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  LFD++ ++GL P+ + + TLI  + + G ++        ML +G+ PD+  YN L+
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  + G++   RNI++ ++  G+R   +TY  L+   C+ G  + A+ +  E   M++ 
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE---MDQN 444

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               + V ++ L+ G C++G++ DA   L E+L  G+ P+  TY ++ +   +KG
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 195/369 (52%), Gaps = 10/369 (2%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            ++ F K G  +    +F  ++    SL    +  + L+  Y K      GF    +   
Sbjct: 246 LMNKFCKEGNISDAQKVFDEIT--KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
              +  V + + L+ AL KE K +    ++ EM +R +  N   F  +++G  + G+++ 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             +  + M S G+ P +V YN L++G+CK G    +  A  +   M+  G+ P+++T+ T
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNG---DLVAARNIVDGMIRRGLRPDKITYTT 420

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-LDEAVALRDEMMAS 323
           LIDGFC+  ++  A+++ +EM  +GI    V +++L+ G+C +G+ +D   ALR EM+ +
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR-EMLRA 479

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+KP+ VT   +++ FCKK   +    L  ++   G  PSV+TYN L++  CK G+M++A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + ++ML+ GV+PD  TYN L+ G  R  N    R I    +  G+ A L +Y  +V  
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHAN-SSKRYIQKPEI--GIVADLASYKSIVNE 596

Query: 444 LCKDGKSKK 452
           L +  K  +
Sbjct: 597 LDRASKDHR 605



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 3/263 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+D   K          + E+   G    V  +N L+N  C +G + +A  + DE+    
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P VV+ N LING+CK   +++   L   + +    P V TY+ LI+A CKE +M+ A 
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M  RG++P+   +  LI G SR G ++ ++    ++++ G++  +V YN LV   
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+G    A +++D M +       P+ +TY  LI GFC+ G +E A  +  E+ + G+ 
Sbjct: 391 CKNGDLVAARNIVDGMIR---RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
            ++  +  +   M ++G + D E
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAE 470


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 208/369 (56%), Gaps = 10/369 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V +   ++ AL  E +  +     +EM  R +  N+ ++  +++GLCK G++++A
Sbjct: 41  GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M+   V P  VTYN LI G CK     + Y    + ++MV +G +P+  T+ TL
Sbjct: 101 VALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYD---LLEEMVYSGCIPDIFTYTTL 156

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG- 324
           I GFCK +    A++VFE++ + G    VVTY+ LI+GLC +G+L EA+ L   M+ SG 
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             PN VT N+LI+GFC+   +++A  L + ++E G SP V+TY TL++ +CK  R++DA+
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M  +G+ PDV T+  L+ GL RE  +    +I+ E+        + TYN ++   
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+  + ++A       F +E+    PN+V++N++I+G C+  +  +A  L+ E   +   
Sbjct: 337 CRANQLEEA-----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 505 PNQTTYQIV 513
           P+   Y  V
Sbjct: 392 PDVVMYTTV 400



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 197/361 (54%), Gaps = 14/361 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K  +  +   + +EM       ++ ++  ++ G CK+ K + A  + E + +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDE 273
            G  P VVTY+ LIDG CK+G   ++ +A  +F  M+++G  +PN VT+N+LI GFC+  
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEG---RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  AM + E M   G +  VVTY +L+NG C   +LD+A  L ++M   GL P+VVT  
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +L++G C++  +  A  +  ++  +  SP+V TYNT++D YC+  ++E+A   R  ML+ 
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEE 352

Query: 394 -GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
               P+V ++N +I GL +         ++ E         +V Y  ++  LC++ K  +
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  +  +M  +E+    PN +TY+ L+ G C  G L+ A G     +EKG +PN  TY +
Sbjct: 413 ACRVYRKM--LEEPGCLPNSITYSTLVTGLCNAGMLDRARG----YIEKGCVPNIGTYNL 466

Query: 513 V 513
           +
Sbjct: 467 L 467



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 174/327 (53%), Gaps = 8/327 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++ GLCK  +L +A   +  M S G  P V TY  +I   C +    ++++A    
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVE---NRLHEARKFL 69

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M    + PN VT+  LIDG CK   +  A+ +  +M    +    VTYNSLI+GLC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA-VTYNSLISGLCKA 128

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +  EA  L +EM+ SG  P++ T   LI GFCK K  + A  +F+ +  +G  P V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + LID  CKEGR+++A  +   M+  G  +P+  TYN LI+G  R G ++   N++  + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G    +VTY  L+   CK  +   A  LL++   M ++   P++VT+  L+ G C++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ---MTRKGLTPDVVTFTSLMDGLCREN 305

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L DA  +L E+  K   P   TY  +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTI 332



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 170/309 (55%), Gaps = 8/309 (2%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           S   VTY  LI G CK   + ++ +A      MV  G  P+  T+  +I   C +  +  
Sbjct: 8   SADFVTYTSLIQGLCK---VKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A K  EEM +  +   VVTY  LI+GLC  G++DEAVAL  +M    + P  VT N+LI+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK +   +A  L +++   G  P + TY TLI  +CK  + +DA  +   ++ RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDGKSKKAVSL 456
           DV TY+CLI GL +EG ++   ++   ++ +G      VTYN L+   C+ GK  +A++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L+   +M +    P++VTY  L+ GFC+  +L+DA  LLN++  KGL P+  T+  + + 
Sbjct: 244 LE---RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 517 MMEKGFIPD 525
           +  +  + D
Sbjct: 301 LCRENRLSD 309



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 147/283 (51%), Gaps = 19/283 (6%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+ +LI G CK + +  A+    +M S G    V TY ++I+ LCV+ +L EA    +E
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M    L PNVVT   LI+G CK   V++A  L   + ++ + P+ +TYN+LI   CK  R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
             +A+ +   M+  G +PD+ TY  LI G  +    +    +  +LV  G R  +VTY+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LCK+G+ K+A+ L   M K       PN VTYN LI GFC+ GK+++A  LL  + 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIK--SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 500 EKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
           E G  P+  TY  +                  +M  KG  PD+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 163/332 (49%), Gaps = 16/332 (4%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+   LV     P + ++   +    K G+      +F  +   S S   N++  + L+ 
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLIS 229

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +  K        +R  + G    V++   L+    K  + +D   +  +M R+ +  
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ +F  +++GLC+  +L+ A  I+ +M+    SP V TYN ++DGYC+   +      +
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL------E 343

Query: 245 AVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
              K M+E     PN V+FN +I G CK    S AM++ EE         VV Y ++I+G
Sbjct: 344 EARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDG 403

Query: 304 LCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           LC + K+DEA  +  +M+   G  PN +T + L+ G C   ++++AR       E+G  P
Sbjct: 404 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVP 459

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           ++ TYN LIDA+ K  R EDA  + + M+ RG
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++    S   +TY +LI   CK  R+E A      M+ +G  PDV TY  +I  L  E  
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   R  + E+ N  +   +VTY +L+  LCK G+  +AV+LL +M    ++K  P  VT
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM----RKKCVPTAVT 117

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           YN LI G C+  +  +A  LL                   EEM+  G IPDI  +   I+
Sbjct: 118 YNSLISGLCKAERASEAYDLL-------------------EEMVYSGCIPDIFTYTTLIT 158

Query: 535 G 535
           G
Sbjct: 159 G 159


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G +  V++ N ++  + + G       + ++M+ R ++ ++ +++ +++ LC+ G
Sbjct: 173 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A  + ++M++ G+   VVTYN L+ G CK G   K      + KDMV   I+PN +
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVI 289

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN L+D F K+  +  A ++++EM + GI+  ++TYN+L++G C+  +L EA  + D M
Sbjct: 290 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           + +   P++VT  +LI G+C  K V+    +F +IS++GL  + +TY+ L+  +C+ G++
Sbjct: 350 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 409

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +   M+  GVLPDV TY  L+ GL   G +E    I  +L  + M  G+V Y  +
Sbjct: 410 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A +L      +  +   PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 470 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  +    +  G
Sbjct: 527 DGNAPNDCTYNTLIRAHLRDG 547



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 202/355 (56%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+  I   + L              FK     G+KSSV++ N L+R L K G
Sbjct: 222 STIIDSLCRDGCIDAAISL--------------FKEMETKGIKSSVVTYNSLVRGLCKAG 267

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K+ D   + K+M  R I  N+ +FN +L+   K GKL +A+++ ++M + G+SP ++TYN
Sbjct: 268 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 327

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC +    ++ +A+ +   MV N   P+ VTF +LI G+C  + +   MKVF  +
Sbjct: 328 TLMDGYCMQN---RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+ A  VTY+ L+ G C  GK+  A  L  EM++ G+ P+V+T   L++G C    +
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +F+D+ +  +   ++ Y T+I+  CK G++EDA+ +  S+  +GV P+V TY  +
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+GL ++G++     ++ ++  +G      TYN L+ A  +DG    +  L++EM
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 217/384 (56%), Gaps = 14/384 (3%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  +  ++  +  +K+ V + + ++ +L ++G  +    ++KEM+ + I+ ++ ++N ++
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLCKAGK N  + +++DM S  + P V+T+N+L+D + K+   GK+ +A+ ++K+M+  
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE---GKLQEANELYKEMITR 317

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI PN +T+NTL+DG+C    +S A  + + M  +  +  +VT+ SLI G C+  ++D+ 
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +   +   GL  N VT + L+ GFC+   ++ A  LF ++   G+ P V+TY  L+D 
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437

Query: 374 YCKEGRMEDAFA----MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            C  G++E A      ++ S +D G++     Y  +I G+ + G VE   N+   L   G
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  ++TY +++  LCK G   +A  LL    KME++   PN  TYN LI+   + G L 
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNAPNDCTYNTLIRAHLRDGDLT 550

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
            +  L+ E+   G   + ++ ++V
Sbjct: 551 ASAKLIEEMKSCGFSADASSIKMV 574



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 205/376 (54%), Gaps = 14/376 (3%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++   A+ +  +F  V    K+++   I  N+ + N ++N  C+  K   A  ++
Sbjct: 77  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P   T+N LI G   +G   K+ +A  +   MVENG  P+ VT+N++++G 
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEG---KVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 193

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  + S A+ +  +M    + A V TY+++I+ LC DG +D A++L  EM   G+K +V
Sbjct: 194 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 253

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N+L+ G CK        +L  D+  + + P+VIT+N L+D + KEG++++A  +   
Sbjct: 254 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 313

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ RG+ P++ TYN L+ G   +  +    N+++ +V N     +VT+  L+   C    
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC---- 369

Query: 450 SKKAVSLLDEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               V  +D+  K    + K     N VTY++L++GFCQ GK++ A  L  E++  G++P
Sbjct: 370 ---MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426

Query: 506 NQTTYQIVREEMMEKG 521
           +  TY I+ + + + G
Sbjct: 427 DVMTYGILLDGLCDNG 442



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 152/279 (54%), Gaps = 5/279 (1%)

Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           + GI  + K DA+  F++M+ +  LP+ V F+       + +  +  +   +++  +GIA
Sbjct: 51  RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 110

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + T N +IN  C   K   A ++  ++M  G +P+  T N LI G   +  V +A VL
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 170

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D + E G  P V+TYN++++  C+ G    A  +   M +R V  DV TY+ +I  L R
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           +G ++   ++  E+   G+++ +VTYN LV  LCK GK      LL +M   E     PN
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVPN 287

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++T+NVL+  F ++GKL++AN L  E++ +G+ PN  TY
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 189/414 (45%), Gaps = 61/414 (14%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N++   +L+  + ++ K  L  E F+    +G+   V++   LL  L   GK E   
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +++++++ +++L +  +  ++ G+CK GK+  A ++   +   GV P V+TY ++I G 
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CKKG + +   A+ + + M E+G  PN+ T+NTLI    +D +++A+ K+ EEM S G +
Sbjct: 509 CKKGSLSE---ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
           A   +   +I                 +M+ S +K        L   +C  K  +  + L
Sbjct: 566 ADASSIKMVI-----------------DMLLSAMK-------RLTLRYCLSKGSKSRQDL 601

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRME----DAFAMRNSMLDRGVLPDVSTYNCLIA 407
            +    + +  S +T+  +         +     +A  M ++ L+R            + 
Sbjct: 602 LELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRD-----------LR 650

Query: 408 GLSREGNVEGVRN------IMNELVNNGMR-------------AGLVTYNILVGALCKDG 448
            L R   ++  +N      + NEL+  G+                 V Y    G + + G
Sbjct: 651 KLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPG 710

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +    V+  +   +M +    PN +TY+ LI GFC++ +L++AN +L+ ++ KG
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 32/264 (12%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I+ G V +   +    VD K D+A+AL  EM+ S   P++V  +   +   + K      
Sbjct: 39  ISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL 98

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
                +   G++ ++ T N +I+ +C+  +   A+++   ++  G  PD +T+N LI GL
Sbjct: 99  DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 158

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------- 460
             EG V     +++ +V NG +  +VTYN +V  +C+ G +  A+ LL +M         
Sbjct: 159 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 218

Query: 461 ----------------------FK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                                 FK ME +    ++VTYN L++G C+ GK  D   LL +
Sbjct: 219 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 278

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           ++ + ++PN  T+ ++ +  +++G
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEG 302



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/402 (21%), Positives = 165/402 (41%), Gaps = 74/402 (18%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F ++GK      +F  +   S  +  + +   +L+     N K     E F+      + 
Sbjct: 403 FCQSGKIKLAEELFQEM--VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 460

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             ++    ++  + K GK ED   ++  +  + ++ N+ ++  +++GLCK G L++A+ +
Sbjct: 461 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 520

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID- 267
           +  M+  G +P   TYN LI  + + G +    K   + ++M   G   +  +   +ID 
Sbjct: 521 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK---LIEEMKSCGFSADASSIKMVIDM 577

Query: 268 ----------GFCKDENISAAMKVFEEMGSHGIAAGVVTY------NSLINGLCVDG--- 308
                      +C  +   +   + E  GS  I    +T+      N++   L V+    
Sbjct: 578 LLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEA 637

Query: 309 -------------KL------------DEAVALRDEMMASGLK------------PNVVT 331
                        KL            D  V + +E++  GL+            P    
Sbjct: 638 RGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAV 697

Query: 332 SNALINGFCK----KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
             A   G  +    K  V  A  L  ++ ++G++P+ ITY++LID +CKE R+++A    
Sbjct: 698 HYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEA---- 753

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSRE----GNVEGVRNIMNEL 425
           N MLD  V    S    L+AGL R+       EG  N+ ++L
Sbjct: 754 NQMLDLMVTKGDSDIRYLLAGLMRKKRKGSETEGWENLPDDL 795



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 27/230 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI--IIDMLM-------LAYVKNMKPHL 134
           + +   +++G  T+ + +   + +C  S   +SI  +IDML+       L Y  +     
Sbjct: 538 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKS 597

Query: 135 GFEAFKRAGDYGLKSSVLS------CNQLLRAL---VKEGKFEDVEYVYKEMKRRRIELN 185
             +  + +G   ++ S L+      CN +  +L     E +  +   + +++++ R    
Sbjct: 598 RQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSV 657

Query: 186 LDSFN------FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           L  F        V N L   G  +   D+M D++   +    V Y        + G    
Sbjct: 658 LKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLE---LPTDAVHYAHRAGRMRRPGRKMT 714

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           +  A+ + K+M++ GI PN +T+++LIDGFCK+  +  A ++ + M + G
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 208/387 (53%), Gaps = 21/387 (5%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H  F    +    G     +S   L+  L K G+      + + +  + ++LN   +N V
Sbjct: 142 HQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV 201

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           + G+CK   +N A D+  +M S G+SP VVTY+ LI G+     +GK+  A  +F  ++ 
Sbjct: 202 IYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV---VGKLKDAIDLFNKIIL 258

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             I P+  TFN L+DGFCKD  +     VF  M   GI   VVTYNSL++G C+  +++ 
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A ++ + M   G+ P++ + N LINGFCK K V+KA  LF+++  + + P+V+TYN+LID
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 378

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              K GR+  A  + + M DRGV P++ TYN +I  L +   V+    ++ +  + G++ 
Sbjct: 379 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            + TY IL+  LCK       V+                  TYNV+I GFC+KG  ++A 
Sbjct: 439 SMYTYTILIDGLCKVEGYDITVN------------------TYNVMIHGFCKKGLFDEAL 480

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMME 519
            LL+++ +   IPN  TY+I    +++
Sbjct: 481 SLLSKMKDSSCIPNAVTYEITIRSLLD 507



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 188/353 (53%), Gaps = 4/353 (1%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D   ++  + R+        FN +L  L K+   +    + + M+  G+ P +   NIL
Sbjct: 68  DDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNIL 127

Query: 228 IDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           I  +C+ G I        +F D +V  G   ++V++ TLI G CK     AA+ + + + 
Sbjct: 128 IYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD 187

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +    V YN++I G+C D  +++A  L  EM++ G+ PNVVT +ALI+GF     ++
Sbjct: 188 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 247

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  LF+ I  + + P   T+N L+D +CK+ +M++   +   M+ +G++PDV TYN L+
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G      V   ++I N +   G+   + +YNIL+   CK  K  KA++L +E   M  +
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE---MHCK 364

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
              PN+VTYN LI G  + G++  A  L++++ ++G+ PN  TY  + + + +
Sbjct: 365 NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 185/359 (51%), Gaps = 21/359 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+++ + ++    K+   +  F+ +      G+  +V++ + L+      GK +D   ++
Sbjct: 194 NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF 253

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++    I+ +  +FN +++G CK  K+ +   +   M   G+ P VVTYN L+DGYC  
Sbjct: 254 NKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCL- 312

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + ++  A ++F  M + G+ P+  ++N LI+GFCK + +  AM +F EM    I   V
Sbjct: 313 --VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 370

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYNSLI+GL   G++  A+ L D+M   G+ PN++T N++I+   K   V+KA  L   
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 430

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
             +QG+ PS+ TY  LID  CK                 G    V+TYN +I G  ++G 
Sbjct: 431 FKDQGIQPSMYTYTILIDGLCKV---------------EGYDITVNTYNVMIHGFCKKGL 475

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---MEKEKKWP 470
            +   ++++++ ++      VTY I + +L  + ++ KA  L  EM     + +   +P
Sbjct: 476 FDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYP 534



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  + K+ K   G   F      G+   V++ N L+       +    + ++  M +
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 328

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             +  ++ S+N ++NG CK  K++KA ++  +M    + P VVTYN LIDG  K G I  
Sbjct: 329 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS- 387

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  +   M + G+ PN +T+N++ID   K   +  A+ +  +    GI   + TY  
Sbjct: 388 --YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 445

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GLC                  G    V T N +I+GFCKK L ++A  L   + +  
Sbjct: 446 LIDGLC---------------KVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSS 490

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
             P+ +TY   I +       + A  +   M+ RG+L   ++Y C
Sbjct: 491 CIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 23/298 (7%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N +++++    F  + ++  A+ +F  +           +N ++  L         ++L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKL----VEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +M   G+KPN+   N LI  FC+  L    + +A +  D +   G     ++Y TLI  
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G    A  +   +  + V  +   YN +I G+ ++ +V    ++ +E+V+ G+   
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY+ L+      GK K A+ L +   K+  E   P+  T+N+L+ GFC+  K+++   
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFN---KIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 494 LLNELLEKGLIPNQTTYQ-------IVRE---------EMMEKGFIPDIEGHMYNISG 535
           +   ++++G+IP+  TY        +V+E          M + G  PDI  +   I+G
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           K N ++ ++    F     V+ A  LF+ +  Q  +P    +N ++ +  K        +
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREG----NVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +   M  RG+ P++   N LI    + G     +       ++LV  G     V+Y  L+
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK G+++ A+ LL    +++ +    N V YN +I G C+   + DA  L +E++ K
Sbjct: 168 HGLCKVGETRAALDLLQ---RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224

Query: 502 GLIPNQTTY 510
           G+ PN  TY
Sbjct: 225 GISPNVVTY 233


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 206/379 (54%), Gaps = 8/379 (2%)

Query: 151 VLSCNQLLRALVK--EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           V  C  LLR +V+    + E     Y E+       N   FN +++G CK G +  A  +
Sbjct: 105 VQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLV 164

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            +++   G+ P VV++N LI G CK G + + ++   V   M    + P+  TF+ LI+G
Sbjct: 165 FDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGV---MESERVCPDVFTFSALING 221

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+  +     +F+EM   G+    VT+  LI+G C  GK+D A+     M+A G++P+
Sbjct: 222 LCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPD 281

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT NALING CK   +++AR L +++S  GL P  IT+ TLID  CK G ME A  ++ 
Sbjct: 282 LVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKR 341

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M++ G+  D   +  LI+GL R+G V     ++ ++++ G +    TY ++V   CK G
Sbjct: 342 RMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKG 401

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
                  LL EM   + +   P +VTYN L+ G C++G++++A  LL+ +L  G+ PN  
Sbjct: 402 NVXMGFKLLKEM---QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDI 458

Query: 509 TYQIVREEMMEKGFIPDIE 527
           TY I+ E   + G   D++
Sbjct: 459 TYNILLEGHSKHGSSVDVD 477



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 203/373 (54%), Gaps = 9/373 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   +    N L+    K G       V+ E+ +R +   + SFN +++G CKAG + 
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +   M+S  V P V T++ LI+G CK+G   ++ +   +F +M   G++PN VTF 
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEG---RLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDG CK   +  A+K F+ M + G+   +VTYN+LINGLC  G L EA  L +EM AS
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+P+ +T   LI+G CK   +E A  +   + E+G+    + +  LI   C++GR+ DA
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   ML  G  PD  TY  ++    ++GNV     ++ E+ ++G   G+VTYN L+  
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G+ K A  LLD M  +      PN +TYN+L++G  + G   D + + N   EKGL
Sbjct: 432 LCKQGQVKNAKMLLDAMLNVGVA---PNDITYNILLEGHSKHGSSVDVD-IFNS--EKGL 485

Query: 504 IPNQTTYQIVREE 516
           + +  +Y  +  E
Sbjct: 486 VKDYASYTALVNE 498



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 6/298 (2%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +C +      L+    K  +   G   F      GL  + ++   L+    K GK +
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
                ++ M  + +  +L ++N ++NGLCK G L +A  ++ +M + G+ P  +T+  LI
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DG CK    G M  A  + + MVE GI  ++V F  LI G C+D  +  A ++  +M S 
Sbjct: 325 DGCCK---YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSA 381

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G      TY  +++  C  G +     L  EM + G  P VVT NAL+NG CK+  V+ A
Sbjct: 382 GFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNA 441

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           ++L D +   G++P+ ITYN L++ + K G   D   + NS  ++G++ D ++Y  L+
Sbjct: 442 KMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV-DIFNS--EKGLVKDYASYTALV 496



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 10/297 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++   K G+    S +F  +  C   L  N +   +L+    K  K  L  + F+   
Sbjct: 217 ALINGLCKEGRLDEGSLLFDEM--CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMML 274

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++  +++ N L+  L K G  ++   +  EM    +  +  +F  +++G CK G + 
Sbjct: 275 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDME 334

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +I   M   G+    V + +LI G C+    G+++ A+ + +DM+  G  P++ T+ 
Sbjct: 335 SALEIKRRMVEEGIELDDVAFTVLISGLCRD---GRVHDAERMLRDMLSAGFKPDDPTYT 391

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++D FCK  N+    K+ +EM S G   GVVTYN+L+NGLC  G++  A  L D M+  
Sbjct: 392 MVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNV 451

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDI-SEQGLSPSVITYNTLIDAYCKEGR 379
           G+ PN +T N L+ G  K      + V  D   SE+GL     +Y  L++   K  +
Sbjct: 452 GVAPNDITYNILLEGHSK----HGSSVDVDIFNSEKGLVKDYASYTALVNESSKTSK 504


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 235/468 (50%), Gaps = 49/468 (10%)

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY---GLKSS 150
           KF   +++     T       N ++ + L+  Y K    +LG +A +  GD    G+  +
Sbjct: 398 KFNEANSVLK--ETLEKGFTPNEVVYNTLIDGYCK--MGNLG-DALRIRGDMVSKGINPN 452

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN---------------- 194
            ++ N +++   K G+ E  E + +EM  R   +N  +F  +++                
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512

Query: 195 -------------------GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
                              GLCK GK + A ++   +   G    +VT N LI G CK G
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
               M +A  + K M+E G + +++T+NTLI G CK+  +    K+  EM   GI     
Sbjct: 573 ---NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN LI+G+C  GKLDEAV L +E  +  L PNV T   +I+G+CK   +E+   LF ++
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             Q L  + + YNTLI AYC+ G   +AF + + M  +G+ P  +TY+ LI G+   G +
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  + +++E+   G+   +V Y  L+G  CK G+  K V++L EM   +     PN +TY
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH---PNKITY 806

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            V+I G+ + G ++ A  LL+E++ KG++P+  TY ++     ++G I
Sbjct: 807 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 854



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 218/432 (50%), Gaps = 6/432 (1%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           +P +++   +     K   +   +    T    +  +  +    + A+ K  K     + 
Sbjct: 276 FPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G+  +V++ N L+  L K G  ++     ++M +  +   L +++ ++NGL K
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             K N+A+ ++++    G +P  V YN LIDGYCK G +G   +   +  DMV  GI PN
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR---IRGDMVSKGINPN 452

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT N++I GFCK   +  A  + EEM S G +     + ++I+ LC++ + + A+    
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+   ++PN      L+ G CK+     A  L+  + E+G   +++T N LI   CK G
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M++A  +   ML+RG + D  TYN LI+G  +EG VE    +  E+V  G+     TYN
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +L+  +C+ GK  +AV+L +E    +     PN+ TY V+I G+C+  K+E+   L  EL
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNE---CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689

Query: 499 LEKGLIPNQTTY 510
           L + L  N   Y
Sbjct: 690 LTQNLELNSVVY 701



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 191/370 (51%), Gaps = 13/370 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV----KNMKPHLGFEAF 139
           + +H    N +F S      AL    + L RN    D L+   V    K  K     E +
Sbjct: 493 TIIHWLCMNSRFES------ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            R  + G  +++++ N L+  L K G  ++   + K+M  R   L+  ++N +++G CK 
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK+ +   +  +M   G+ P   TYN+LI G C+   IGK+ +A  ++ +     ++PN 
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR---IGKLDEAVNLWNECKSRDLVPNV 663

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            T+  +IDG+CK + I    K+F E+ +  +    V YN+LI   C +G   EA  L D+
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M + G+ P   T ++LI+G C    +E A+ L D++ ++GL P+V+ Y  LI  YCK G+
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M+    +   M    + P+  TY  +I G S+ G+++    +++E+V  G+    VTYN+
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843

Query: 440 LVGALCKDGK 449
           L    CK+GK
Sbjct: 844 LTNGFCKEGK 853



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 182/363 (50%), Gaps = 62/363 (17%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           GV P V T   L+    K   + K Y    VF+ M   G+ P+   F+T I+ FCK   +
Sbjct: 274 GVFPTVKTCTFLLSSLVKANELEKSY---WVFETM-RQGVSPDVYLFSTAINAFCKGGKV 329

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+++F +M   G++  VVTYN+LI+GLC  G LDEA   +++M+  G+   ++T + L
Sbjct: 330 EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 389

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING  K +   +A  +  +  E+G +P+ + YNTLID YCK G + DA  +R  M+ +G+
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-------------------------- 429
            P+  T N +I G  + G +E    I+ E+++ G                          
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 430 ---------MRA--GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
                    MR   GL+T   LVG LCK+GK   AV L    F++ ++    N+VT N L
Sbjct: 510 FLREMLLRNMRPNDGLLT--TLVGGLCKEGKHSDAVEL---WFRLLEKGFGANLVTTNAL 564

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           I G C+ G +++A  LL ++LE+G + ++ TY                  +R EM+++G 
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624

Query: 523 IPD 525
            PD
Sbjct: 625 EPD 627


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 238/465 (51%), Gaps = 57/465 (12%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF---- 167
           L  N+  +++L+  + +  +  LGF    +    GL+ ++++   L+  L K GKF    
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65

Query: 168 -------------EDVEY------------------VYKEMKRRRIELNLDSFNFVLNGL 196
                        +D  Y                  ++K+M+    +LN+ +++ +++ L
Sbjct: 66  ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK  ++N+A DI   MK+  +SP + TY  LI G C      +  +A A+  +M    I+
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN---FSRWKEASALLNEMTSLNIM 182

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VTFN L+D FCK+  + AA  V + M   G+   VVTYNSL+ G  +  ++ EA  L
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D M+  G KP+V + + LING+CK K +++A+ LF+++  QG +P+ ++YNTLI   C+
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR+ +A  +  +M   G LP++ TY  L+ G  ++G +     +   + +  ++  LV 
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YNILV A+CK G  K A  L  E+F +  +   PN+  Y  +I G C++G L++A     
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQ---PNVQIYTTIINGLCKEGLLDEALEAFR 419

Query: 497 ELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
            + + G  P++ +Y ++                  EM ++GFI D
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 208/371 (56%), Gaps = 6/371 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK+  + G + +V++ + L+ +L K  +  +   ++  MK + I   + ++  ++ GLC 
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             +  +AS ++ +M SL + P VVT+N+L+D +CK+   GK+  A+ V K M E G+ P+
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKE---GKVLAAEGVLKTMTEMGVEPD 219

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+N+L+ G+     +  A K+F+ M + G    V +Y+ LING C   ++DEA  L +
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G  PN V+ N LI+G C+   + +A+ LF ++   G  P++ TY  L+D +CK+G
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  AF +  +M    + P++  YN L+  + + GN++  R + +EL   G++  +  Y 
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++  LCK+G   +A   L+    ME +   P+  +YNV+I+GF Q      A  L+ E+
Sbjct: 400 TIINGLCKEGLLDEA---LEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456

Query: 499 LEKGLIPNQTT 509
            ++G I +  T
Sbjct: 457 RDRGFITDAGT 467



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 168/310 (54%), Gaps = 6/310 (1%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+  G+SP   T NILI+ +C+   + ++    +V    ++ G+ P  VTF TLI+G  K
Sbjct: 1   MELAGLSPNTCTLNILINCFCQ---LQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGK 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
               + A+++F++M + G      TY ++INGLC  G+   A  L  +M  +G + NVVT
Sbjct: 58  VGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LI+  CK + V +A  +F  +  + +SP++ TY +LI   C   R ++A A+ N M 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
              ++P+V T+N L+    +EG V     ++  +   G+   +VTYN L+       +  
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  L D M  + K  K P++ +Y++LI G+C+  ++++A  L NE++ +G  PN  +Y 
Sbjct: 238 EARKLFDVM--ITKGCK-PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294

Query: 512 IVREEMMEKG 521
            +   + + G
Sbjct: 295 TLIHGLCQLG 304



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 3/287 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  ++L+  + K  K        K   + G++  V++ N L+       +  +   ++
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  +  + ++ S++ ++NG CKA ++++A  +  +M   G +P  V+YN LI G C+ 
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ- 302

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G++ +A  +FK+M  NG LPN  T+  L+DGFCK   +  A ++F  M S  +   +
Sbjct: 303 --LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN L+N +C  G L +A  L  E+   GL+PNV     +ING CK+ L+++A   F +
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           + + G  P   +YN +I  + +      A  +   M DRG + D  T
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 3/209 (1%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GL PN  T N LIN FC+ + V+    +     + GL P+++T+ TLI+   K G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
              A  + + M+ RG  PD  TY  +I GL + G       +  ++   G +  +VTY+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ +LCK  +  +A   LD    M+ +   P I TY  LI+G C   + ++A+ LLNE+ 
Sbjct: 121 LIHSLCKYRRVNEA---LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
              ++PN  T+ ++ +   ++G +   EG
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEG 206


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 226/431 (52%), Gaps = 44/431 (10%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  Y +  +P LG   F R    GL   V S N L+    KEG+ +    ++ +M+ 
Sbjct: 193 NILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEE 252

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + I  N+ +++ ++NGLCK  +++KA  ++  M   GV P  +TYN LI GY   G    
Sbjct: 253 QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSG---- 308

Query: 240 MYKADA-VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           M+K    VFK+M  + ++P+    N+ +   CK   I  A  +F+ M   G    V++Y 
Sbjct: 309 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 368

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++G    G +     L + M+  G+ P+    N LIN + +  +++K+ ++F+D+++Q
Sbjct: 369 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 428

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG---------- 408
           G++P +IT++T+I A+C+ GR++DA    N M+D GV PD + Y+CLI G          
Sbjct: 429 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 488

Query: 409 --------------------------LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                                     L +EG V   +++++ +++ G R  L+T+N LV 
Sbjct: 489 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 548

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C  G  K+AV LLD M  +  E   P+I TYN L+ G+C+ G+++DA  L  ++L K 
Sbjct: 549 GYCLVGNMKEAVGLLDSMESVGVE---PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 605

Query: 503 LIPNQTTYQIV 513
           +     +Y I+
Sbjct: 606 VTLTSVSYNII 616



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 237/461 (51%), Gaps = 17/461 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P   ++   +H +  +G +     +F  +S  S  L  +    +  M 
Sbjct: 280 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS--SSLLVPDVGNCNSFMT 337

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K+ +     + F      G K  V+S   LL      G    ++ ++  M    +  
Sbjct: 338 ALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVP 397

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +   FN ++N   + G ++K+  + EDM   GV+P ++T++ +I  +C+   +G++  A 
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR---LGRLDDAM 454

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY-NSLING 303
             F  M++ G+ P+   ++ LI G C   ++  A ++  +M S GI    + +  S+IN 
Sbjct: 455 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 514

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC +G++ E   + D ++ +G +PN++T N+L++G+C    +++A  L D +   G+ P 
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           + TYNTL+D YCK GR++DA  +   ML + V     +YN ++ GL +       + + +
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E++ +GM   + TY  ++G LC++  + +A  LL+++F M  +    +I+T+N++I+   
Sbjct: 635 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF---DILTFNIVIRAMF 691

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI-----VREEMME 519
           + G+ ++A  L   +   GL+P   TY++     ++EE  E
Sbjct: 692 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 732



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 190/357 (53%), Gaps = 21/357 (5%)

Query: 168 EDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNKASDI----------MEDMKSLG 216
           +D  +++ E+  RR         N +L+ L +A       D+          M+      
Sbjct: 125 DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE 184

Query: 217 VSPKVVTYNILIDGY--CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            +P + TYNILI+ Y   ++  +G       VF  ++  G+ P+  ++N LIDGF K+  
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGL-----PVFGRLLRTGLGPDVFSYNALIDGFSKEGE 239

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A  +F +M   GI   VVTY+SLINGLC   ++D+A  +  +M+ +G++PN +T N 
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 299

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+G+    + +++  +F ++S   L P V   N+ + A CK GR+++A  + +SM+ +G
Sbjct: 300 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 359

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV +Y  L+ G +  G + G+ N+ N +V  G+      +N L+ A  + G   K++
Sbjct: 360 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 419

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            + ++   M K+   P+I+T++ +I  FC+ G+L+DA    N +++ G+ P+   Y 
Sbjct: 420 LMFED---MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 473



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 219/450 (48%), Gaps = 14/450 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           +  S+V+    P + S+   LH +   G    +  +F+ +    + +  +  + + L+ A
Sbjct: 351 IFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM--VCEGVVPDRHVFNTLINA 408

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +          F+     G+   +++ + ++ A  + G+ +D    +  M    +  +
Sbjct: 409 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NILIDGYCKKGGIGKMYKAD 244
              ++ ++ G C    L KA +++ DM S G+ P  + +   +I+  CK+G + +     
Sbjct: 469 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE---GK 525

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V   ++  G  PN +TFN+L+DG+C   N+  A+ + + M S G+   + TYN+L++G 
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G++D+A+ L  +M+   +    V+ N +++G  + +    A+ +F ++ E G++ S+
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY T++   C+    ++A  +   +    V  D+ T+N +I  + + G  +  + +   
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 705

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFC 483
           +   G+   ++TY +++  L K+   + A    D +F  MEK    P+    N +I+   
Sbjct: 706 ISTYGLVPTILTYRVMITNLIKEESFEDA----DNLFSSMEKSSCTPDSRILNEIIRMLL 761

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            KG++  A   L+++ +KG++P  TT  ++
Sbjct: 762 NKGEVAKAGNYLSKIDKKGILPEATTTSLL 791



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 161/307 (52%), Gaps = 3/307 (0%)

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L KEG+  + + V   +       NL +FN +++G C  G + +A  +++ M+S+GV P 
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           + TYN L+DGYCK G I     A  +F+DM+   +    V++N ++ G  +      A +
Sbjct: 575 IYTYNTLVDGYCKHGRIDD---ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 631

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F EM   G+A  + TY +++ GLC +   DEA  L +++ +  +K +++T N +I    
Sbjct: 632 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 691

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K    ++A+ LF  IS  GL P+++TY  +I    KE   EDA  + +SM      PD  
Sbjct: 692 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSR 751

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
             N +I  L  +G V    N ++++   G+     T ++L+     +GK ++ + LL E 
Sbjct: 752 ILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEK 811

Query: 461 FKMEKEK 467
           ++  +E+
Sbjct: 812 YRFLREQ 818



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 25/181 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS------------ 116
           +LH L  A++    +   H  +++G   S+    H  +T    LCRN+            
Sbjct: 616 ILHGLFQARRTIVAKEMFHEMIESGMAVSI----HTYATVLGGLCRNNCTDEANMLLEKL 671

Query: 117 ---------IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
                    +  ++++ A  K  +     E F     YGL  ++L+   ++  L+KE  F
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 731

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ED + ++  M++     +    N ++  L   G++ KA + +  +   G+ P+  T ++L
Sbjct: 732 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 791

Query: 228 I 228
           I
Sbjct: 792 I 792


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 201/375 (53%), Gaps = 17/375 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            +R   YG+  S  +CN +L  L  +   E    +++E+  +    N+ S+N +L  LC 
Sbjct: 220 LRRLRQYGISPSPEACNAVLSRLPLDEAIE----LFQELPHK----NVCSYNILLKALCD 271

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AG++  A  + ++M S   +P VVTY ILI G+C    +G++  A  +  +MV  G+ PN
Sbjct: 272 AGRVKDARQLFDEMAS---APDVVTYGILIHGHC---ALGELENAVKLLDEMVAGGVEPN 325

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              + +++   C    IS A++V E+M    +      Y ++++G C  G L  A    D
Sbjct: 326 ATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFD 385

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   GL  + VT   +ING C+   +E+A  L  ++  + L    +TY  LID YCK G
Sbjct: 386 EMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRG 445

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +M +AF M N+M+ RGV P+V TY  L  GL ++G+V+    +++E+ N G+     TYN
Sbjct: 446 KMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYN 505

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK G  ++A   +  M  M+     P++ TY  LI   C+ G L+ A+ LL E+
Sbjct: 506 SLINGLCKAGYLEQA---MRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562

Query: 499 LEKGLIPNQTTYQIV 513
           L+KG+ P   TY ++
Sbjct: 563 LDKGIKPTIVTYNVL 577



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 24/373 (6%)

Query: 144 DYGLKSSVLS--CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           D  L ++VLS  CN+        G        + EM+R+ +  +  ++  ++NGLC+A +
Sbjct: 360 DEALYTTVLSGFCNK--------GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVE 411

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           L +A  ++++M +  +    VTY +LIDGYCK+G   KM +A  +   MV+ G+ PN VT
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRG---KMAEAFQMHNAMVQRGVTPNVVT 468

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  L DG CK  ++ AA ++  EM + G+     TYNSLINGLC  G L++A+    +M 
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            + LKP+V T   LI+  CK   +++A  L  ++ ++G+ P+++TYN L++ +C  GR+E
Sbjct: 529 TACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 588

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
               + + ML++ + P+ +TYN L+     E N++    I   + +  +     TYNIL+
Sbjct: 589 GGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648

Query: 442 GALCKDGKSKKAVSLLDEM----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
              CK    K+A+   DEM    F++          +Y+ LI+   +K K  +A  L ++
Sbjct: 649 KGHCKARNMKEALYFHDEMIQKGFRL-------TATSYSALIRLLNKKKKFVEARELFHD 701

Query: 498 LLEKGLIPNQTTY 510
           + ++GL      Y
Sbjct: 702 MRKEGLTAESDVY 714



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 210/424 (49%), Gaps = 60/424 (14%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V S N LL+AL   G+ +D   ++ EM       ++ ++  +++G C  G+L  A  ++
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLL 314

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M + GV P    Y  ++   C KG I    +   V +DMV+  ++ +E  + T++ GF
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALR---VVEDMVQRKVILDEALYTTVLSGF 371

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC---------------------VD- 307
           C   ++ +A + F+EM   G+A   VTY ++INGLC                     VD 
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE 431

Query: 308 -------------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                        GK+ EA  + + M+  G+ PNVVT  AL +G CK+  V+ A  L  +
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S +GL  +  TYN+LI+  CK G +E A      M    + PDV TY  LI  L + G+
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++   +++ E+++ G++  +VTYN+L+   C  G+ +    LLD M +   +   PN  T
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE---KNIHPNAAT 608

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMM 518
           YN L+K +C +  ++    +   +  + + PN+ TY I+                 +EM+
Sbjct: 609 YNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 519 EKGF 522
           +KGF
Sbjct: 669 QKGF 672



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 166/349 (47%), Gaps = 32/349 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL +  ++   ++  L +  + E+ E + +EM  RR++++  ++  +++G CK GK+ +A
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             +   M   GV+P VVTY  L DG CK+G +                            
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G + +A     DM    + P+  T+ TLID  CK  ++  A  + +EM   GI   
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +VTYN L+NG C+ G+++    L D M+   + PN  T N+L+  +C +  ++    ++ 
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  + + P+  TYN LI  +CK   M++A    + M+ +G     ++Y+ LI  L+++ 
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
                R + +++   G+ A    Y+  +     +   +  ++L DE+ +
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 152/312 (48%), Gaps = 3/312 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +   +L+  Y K  K    F+        G+  +V++   L   L K+G  +    + 
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +ELN  ++N ++NGLCKAG L +A   M DM +  + P V TY  LID  CK 
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + +   A ++ ++M++ GI P  VT+N L++GFC    +    K+ + M    I    
Sbjct: 550 GDLDR---AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNA 606

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C++  +     +   M +  + PN  T N LI G CK + +++A    D+
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + ++G   +  +Y+ LI    K+ +  +A  + + M   G+  +   Y+  I     E N
Sbjct: 667 MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDN 726

Query: 415 VEGVRNIMNELV 426
           +E    + +ELV
Sbjct: 727 LESTLALCDELV 738



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 165/336 (49%), Gaps = 24/336 (7%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           SF+F+L  LC       ++ ++  ++  G+SP     N ++           + +A  +F
Sbjct: 206 SFDFLL--LCLP-----SAPLLRRLRQYGISPSPEACNAVLSRL-------PLDEAIELF 251

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           +++       N  ++N L+   C    +  A ++F+EM S   A  VVTY  LI+G C  
Sbjct: 252 QELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCAL 304

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+L+ AV L DEM+A G++PN     +++   C K  +  A  + +D+ ++ +      Y
Sbjct: 305 GELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY 364

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            T++  +C +G +  A    + M  +G+  D  TY  +I GL R   +E    ++ E+  
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWA 424

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +    VTY +L+   CK GK  +A  + + M +       PN+VTY  L  G C++G 
Sbjct: 425 RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQ---RGVTPNVVTYTALTDGLCKQGD 481

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++ AN LL+E+  KGL  N  TY  +   + + G++
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 517



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 14/132 (10%)

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ P     N +++ L  +  +E    +  EL +      + +YNIL+ ALC  G+ K A
Sbjct: 227 GISPSPEACNAVLSRLPLDEAIE----LFQELPHKN----VCSYNILLKALCDAGRVKDA 278

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L DEM         P++VTY +LI G C  G+LE+A  LL+E++  G+ PN T Y  V
Sbjct: 279 RQLFDEM------ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSV 332

Query: 514 REEMMEKGFIPD 525
              + +KG+I D
Sbjct: 333 VALLCDKGWISD 344


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 194/341 (56%), Gaps = 11/341 (3%)

Query: 187 DSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           D+F F  +L GLC++ +L KA  ++  MK +G  P    YN LI GY K    G+ +K  
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK-- 66

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
               +MV+N  LP  VT+  ++DG CK      A+K+ +EM   G +  + TYN ++ GL
Sbjct: 67  -FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + KLDEA  + +EM   G  P+VVT N+ I G CK   V++AR     ++   ++P V
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDV 182

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ++Y T+I+  CK G ++ A  M + M +RG  PDV TY+ LI G  + G VE    +++ 
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++  G R  +V YN L+GAL + G   KA  +L E   ME+    P++V+YN  I G C+
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE---MERRGFTPDVVSYNACIDGLCK 299

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             +++ A  + + ++E+G  PN ++Y ++ EE+ +K  + D
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDD 340



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 54/434 (12%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   ++  L K G+ +D   +  EM+ +    N+ ++N ++ GLC+  KL++A  ++
Sbjct: 79  TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           E+M   G  P VVTYN  I G CK        + D   K +    + P+ V++ T+I+G 
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCD------RVDEARKFLARMPVTPDVVSYTTVINGL 192

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  ++ +A ++ ++M + G    VVTY+SLI+G C  G+++ A+ L D M+  G +PN+
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N+L+    +   + KA  +  ++  +G +P V++YN  ID  CK  R++ A A+ + 
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++RG  P+ S+Y+ L+  L ++  ++    ++ +         ++ Y +L+  LCK G+
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372

Query: 450 SKKAVSL-----------------------------LDEMFKMEK---EKKWPNIVTYNV 477
             +A +L                             +D+  ++ K   E+   N+VT+N+
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNI 432

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKG 521
           L+ G C   +L DA  +L  ++++G IP+  TY  +                 EE ++ G
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 492

Query: 522 FIPDIEGHMYNISG 535
            +PD+  +   I+G
Sbjct: 493 CVPDVVTYSALITG 506



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 195/360 (54%), Gaps = 10/360 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    K   F        EM +      + ++  +++GLCKAG+   A  ++++M+ 
Sbjct: 49  NALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRD 108

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G SP + TYN++++G C++    K+ +A  + ++M   G  P+ VT+N+ I G CK + 
Sbjct: 109 KGCSPNIYTYNVIVEGLCEE---RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 165

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A K    M    +   VV+Y ++INGLC  G LD A  + D+M   G  P+VVT ++
Sbjct: 166 VDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS 222

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+GFCK   VE+A  L D + + G  P+++ YN+L+ A  + G +  A  M   M  RG
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV +YN  I GL +   V+  + + + +V  G      +Y++LV  LCK  +   A+
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL-EKGLIPNQTTYQIV 513
           +L+++     ++ +  +I+ Y VL+ G C+ G+ ++A  L +++L EK   P+   Y ++
Sbjct: 343 TLVEQ---AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 199/384 (51%), Gaps = 16/384 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N  ++ L K    + V+   K + R  +  ++ S+  V+NGLCK+G L+ A
Sbjct: 145 GYFPDVVTYNSFIKGLCK---CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSA 201

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S +++ M + G +P VVTY+ LIDG+CK G   ++ +A  +   M++ G  PN V +N+L
Sbjct: 202 SRMLDQMTNRGCTPDVVTYSSLIDGFCKGG---EVERAMGLLDSMLKLGCRPNMVAYNSL 258

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +    +  +I  A  +  EM   G    VV+YN+ I+GLC   ++ +A A+ D M+  G 
Sbjct: 259 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 318

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  + + L+   CKKK ++ A  L +   E+     ++ Y  L+D  CK GR ++A A
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378

Query: 386 MRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           + + +LD  +  PDV  YN ++    +   ++    I  +++       +VT+NILV  L
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGL 437

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C D +   A ++L     M  E   P+ VTY  L+   C+ GK   A  L  E ++ G +
Sbjct: 438 CVDDRLSDAETML---LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494

Query: 505 PNQTTYQ-----IVREEMMEKGFI 523
           P+  TY      +V E M E+ ++
Sbjct: 495 PDVVTYSALITGLVHENMAEEAYL 518



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 181/363 (49%), Gaps = 8/363 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           EA K      +   V+S   ++  L K G  +    +  +M  R    ++ +++ +++G 
Sbjct: 168 EARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G++ +A  +++ M  LG  P +V YN L+    + G IG   KA+ +  +M   G  
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG---KAEDMLVEMERRGFT 284

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V++N  IDG CK E +  A  VF+ M   G      +Y+ L+  LC   +LD+A+ L
Sbjct: 285 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITL 344

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI-SEQGLSPSVITYNTLIDAYC 375
            ++        +++    L++G CK    ++A  LF  +  E+   P V  YN ++D++C
Sbjct: 345 VEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 404

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K  +++ A  +   ML+R    +V T+N L+ GL  +  +     ++  +V+ G     V
Sbjct: 405 KRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 463

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  LV A+CK GKS  A+ L +E     K    P++VTY+ LI G   +   E+A  L 
Sbjct: 464 TYGTLVDAMCKCGKSAAALELFEEAV---KGGCVPDVVTYSALITGLVHENMAEEAYLLF 520

Query: 496 NEL 498
            +L
Sbjct: 521 TKL 523



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M++    P+  TF  L+ G C+   +  A ++   M   G       YN+LI+G      
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             +A     EM+ +   P VVT   +++G CK    + A  L D++ ++G SP++ TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +++  C+E ++++A  M   M  RG  PDV TYN  I GL +   V+  R  +  +    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   +V+Y  ++  LCK G    A  +LD+   M      P++VTY+ LI GFC+ G++E
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQ---MTNRGCTPDVVTYSSLIDGFCKGGEVE 234

Query: 490 DANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
            A GLL+ +L+ G  PN   Y                + +  EM  +GF PD+  +   I
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294

Query: 534 SG 535
            G
Sbjct: 295 DG 296



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 199/443 (44%), Gaps = 22/443 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLA 125
           + L  + V        + ++   K+G   S S +   ++   C+  +   S +ID     
Sbjct: 171 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID----G 226

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           + K  +              G + ++++ N LL AL + G     E +  EM+RR    +
Sbjct: 227 FCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 286

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + S+N  ++GLCKA ++ KA  + + M   G +P   +Y++L++  CKK    ++  A  
Sbjct: 287 VVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK---KELDDAIT 343

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGL 304
           + +   E   + + + +  L+DG CK      A  +F ++    I    V  YN +++  
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C   ++D+A+ +  +M+      NVVT N L++G C    +  A  +   + ++G  P  
Sbjct: 404 CKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 462

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY TL+DA CK G+   A  +    +  G +PDV TY+ LI GL  E   E    +  +
Sbjct: 463 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 522

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           L        +  +N ++    ++G     + L  E+ + + E   PN  T+   I G   
Sbjct: 523 L-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVE---PNARTFGKEISGKLV 572

Query: 485 KGK-LEDANGLLNELLEKGLIPN 506
           K + L  A GL +  ++ G  P+
Sbjct: 573 KAESLGKARGLFDRAVKGGFFPD 595



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 13/324 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R  + G   +  S + L+  L K+ + +D   + ++ + +   +++  +  +L+GLCK
Sbjct: 310 FDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCK 369

Query: 199 AGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G+ ++A  +   +    +  P V  YN+++D +CK+  I K  +   + K M+E     
Sbjct: 370 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ---IHKQMLERNCC- 425

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N VT+N L+ G C D+ +S A  +   M   G     VTY +L++ +C  GK   A+ L 
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 485

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           +E +  G  P+VVT +ALI G   + + E+A +LF  +        V  +N +I  Y + 
Sbjct: 486 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAEN 538

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG-LSREGNVEGVRNIMNELVNNGMRAGLVT 436
           G  +    +   +++  V P+  T+   I+G L +  ++   R + +  V  G    L  
Sbjct: 539 GSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFV 598

Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
            N L+    K G  ++A  +   M
Sbjct: 599 ANTLIDVFAKCGDLEEARRIFYSM 622


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 215/420 (51%), Gaps = 10/420 (2%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI+ID     +    +  L F  F +    GL+   ++ N L+  L K GKF      + 
Sbjct: 134 SILID----CFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           + +    +  + ++  ++NGLCK G+   A+ + + M+  G  P VVTYNILID  CK  
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDK 249

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +    +A  +F  M    I P+  T+N+LI G C       A  +  EM S  I   + 
Sbjct: 250 LVN---EALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIF 306

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           T+N L++ +C +GK+ EA  +   M   G++P+VVT ++L+ G+  +  + +AR LFD +
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +G  P   +YN LI  YCK  R+++A  + N M+ +G+ PD   YN LI GL + G +
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
              +++   + +NG    L TY++L+   CK+G   KA  L      M+     P+I  Y
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR---VMQSTYLKPDIAMY 483

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           N+LI   C+ G L+DA  L +EL  +GL+PN   Y  +   + ++G + +      N+ G
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK+  + G + +V++ N L+ +L K+    +   ++  MK +RI  ++ ++N ++ GLC 
Sbjct: 223 FKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCN 282

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             +  +AS ++ +M SL + P + T+N+L+D  CK+G   K+ +A  VFK M E G+ P+
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEG---KVSEAQGVFKTMTEMGVEPD 339

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+++L+ G+     I  A K+F+ M + G      +YN LI G C   ++DEA  L +
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  GL P+ V  N LI+G C+   + +A+ LF ++   G  P + TY+ L+D +CKEG
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  AF +   M    + PD++ YN LI  + + GN++  R + +EL   G+   +  Y 
Sbjct: 460 YLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYT 519

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++  LCK+G   +A   L+    ME +   P+  +YNV+I+GF Q      A  L+ E+
Sbjct: 520 TIINNLCKEGLLDEA---LEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576

Query: 499 LEKGLIPNQTT 509
            ++G +    T
Sbjct: 577 RDRGFVAEAGT 587



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 210/400 (52%), Gaps = 25/400 (6%)

Query: 151 VLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++   +LL A+VK G++   V  + K+M+   +  ++ + + +++      +++ A  + 
Sbjct: 94  IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG+ P  VT+N LI+G CK   +GK  +A   F D   +G  P   T+ T+I+G 
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCK---VGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK    +AA  +F++M   G    VVTYN LI+ LC D  ++EA+ +   M A  + P++
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N+LI G C  +  ++A  L ++++   + P++ T+N L+DA CKEG++ +A  +  +
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M + GV PDV TY+ L+ G S    +   R + + ++  G +    +YNIL+   CK  +
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  L +EM     +   P+ V YN LI G CQ G+L +A  L   +   G +P+  T
Sbjct: 391 IDEAKQLFNEMI---HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447

Query: 510 YQIVREEMMEKGFI----------------PDIEGHMYNI 533
           Y ++ +   ++G++                PDI   MYNI
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA--MYNI 485



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 177/351 (50%), Gaps = 26/351 (7%)

Query: 110 DSLCRNSII---IDMLMLAYVKNMKPHL-----------GFEAFKRAG-------DYGLK 148
           DSLC++ ++   +D+      K + P +            F  +K A           + 
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            ++ + N L+ A+ KEGK  + + V+K M    +E ++ +++ ++ G     ++ +A  +
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            + M + G  P   +YNILI GYCK   I +   A  +F +M+  G+ P+ V +NTLI G
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDE---AKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+   +  A  +F+ M S+G    + TY+ L++G C +G L +A  L   M ++ LKP+
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +   N LI+  CK   ++ AR LF ++  QGL P+V  Y T+I+  CKEG +++A     
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM--RAGLVTY 437
           +M   G  PD  +YN +I G  +  +      ++ E+ + G    AG  T+
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ ++ ++ + L+  L K  + ++   + + M  R     + ++N ++ G C+A ++++A
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA 163

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              ME M + G  P ++TY  LI G+CK   +G+  +   +  ++   G  P+ VT++T+
Sbjct: 164 HGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLE---LLGEVTRRGFTPDIVTYSTV 220

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK   +  A+ +FEEM     A   +TYNSLI G C  G +DEA+ L  +M+    
Sbjct: 221 IDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT   L++ FCK   ++ A  LF  +    LSP V+T+ +L+D  C EGRMEDA  
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   +  RG  P + TYNC++ G  +   V     ++ +  + G     VTYNILV   C
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G++ +A+  LD++   E      ++  Y +++   C+ G+ +DA     E++++G +P
Sbjct: 398 RAGRTDQALQYLDQL-NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 456

Query: 506 NQTTYQIV 513
              T+  V
Sbjct: 457 AAATFATV 464



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 209/386 (54%), Gaps = 27/386 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++++L    + +D   + +EM  R +  N  +++ +++GLCK  +L++A  ++E M   G
Sbjct: 80  VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P VVTYN +I G+C+     ++ +A    + MV  G  P+ +T+  LI GFCK  ++ 
Sbjct: 140 CAPTVVTYNSIITGFCRA---RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVG 196

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
             +++  E+   G    +VTY+++I+GLC  G+L +AV + +EM  +   P  +T N+LI
Sbjct: 197 RGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLI 253

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G+C+   +++A  L   + +   +P V+TY TL+ A+CK GR++DA+ +   M+   + 
Sbjct: 254 GGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLS 313

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV T+  L+ GL  EG +E    ++ E+   G    + TYN +V   CK  + +KA  L
Sbjct: 314 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL-LEKGLIPNQTT-YQIV- 513
           + +          PN VTYN+L+ G C+ G+ + A   L++L  E G  P     Y I+ 
Sbjct: 374 VAD---FRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430

Query: 514 ---------------REEMMEKGFIP 524
                           EEM+++G++P
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVP 456



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 193/362 (53%), Gaps = 9/362 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+  +L+  L K  +  D   V +EM   R   +  +   V+  LC   +++ A +++E+
Sbjct: 40  LTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 99

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G++   +TY+ L+DG CK     ++ +A A+ + M E G  P  VT+N++I GFC+
Sbjct: 100 MLHRGMAANAITYSALVDGLCK---CERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A    E+M + G    ++TY +LI G C    +   + L  E+   G  P++VT
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + +I+G CK   +  A  +F+++S    +P+ ITYN+LI  YC+ G M++A  +   M+
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           D    PDV TY  L++   + G ++    +  ++V N +   +VT+  LV  LC +G+ +
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 333

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A+ LL+E   + +    P I TYN ++ G+C+  ++  A  L+ +   +G +PN  TY 
Sbjct: 334 DALELLEE---ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYN 390

Query: 512 IV 513
           I+
Sbjct: 391 IL 392



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 176/336 (52%), Gaps = 10/336 (2%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N V+ GLC+AG+L  A  +   M      P  +TY  L+ G  K     ++  A  V ++
Sbjct: 9   NVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAR---RLRDAVQVLQE 64

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV    +P+  T   ++   C  + +  A ++ EEM   G+AA  +TY++L++GLC   +
Sbjct: 65  MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LDEAVAL + M   G  P VVT N++I GFC+ + V++A    + +  +G  P +ITY  
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI  +CK   +     +   +  RG  PD+ TY+ +I GL + G +    +I  E+    
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                +TYN L+G  C+ G   +A+ LL    KM  +K  P++VTY  L+  FC+ G+L+
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLG---KMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           DA  L  +++   L P+  T+  + + +  +G + D
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 180/325 (55%), Gaps = 11/325 (3%)

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           E+ RR    ++ +++ V++GLCKAG+L  A DI E+M     +P  +TYN LI GYC+ G
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAG 260

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
               M +A  +   MV++   P+ VT+ TL+  FCK   +  A ++F++M ++ ++  VV
Sbjct: 261 ---DMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 317

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           T+ SL++GLC +G++++A+ L +E+   G  P + T N +++G+CK   V KA  L  D 
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM-LDRGVLP-DVSTYNCLIAGLSREG 413
             +G  P+ +TYN L+   C+ GR + A    + +  + G  P  V+ Y  ++  L R+G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
             +       E++  G      T+  +V ALCK  + ++A  LL+EM K       P   
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY---GHTPGPG 494

Query: 474 TYNVLIKGFCQKGKLEDANGLLNEL 498
           T + ++  +C+ G ++ A+ L +EL
Sbjct: 495 TCDAVVSAYCRAGMIQKADELASEL 519



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 168/309 (54%), Gaps = 10/309 (3%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           ++P  + +N++I G C+ G   ++  A  V++ M  +   P+ +T+  L+ G  K   + 
Sbjct: 1   MNPGTLLHNVVIGGLCRAG---RLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLR 56

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V +EM S        T   ++  LC+  ++D+A  L +EM+  G+  N +T +AL+
Sbjct: 57  DAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALV 116

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK + +++A  L + ++E+G +P+V+TYN++I  +C+  R+++A      M+  G  
Sbjct: 117 DGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCH 176

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TY  LI G  +  +V     ++ E+   G    +VTY+ ++  LCK G+ + AV +
Sbjct: 177 PDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 236

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +EM         P  +TYN LI G+C+ G +++A  LL ++++    P+  TY  +   
Sbjct: 237 FEEM------SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290

Query: 517 MMEKGFIPD 525
             + G + D
Sbjct: 291 FCKMGRLDD 299



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 7/242 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    + +    LM A+ K  +    +E F++     L   V++   L+  L  EG+ ED
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + +E+ RR     + ++N V++G CKA ++ KA +++ D +S G  P  VTYNIL+ 
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394

Query: 230 GYCKKGGIGKMYKADAVFKDMV--ENGILPNEVT-FNTLIDGFCKDENISAAMKVFEEMG 286
           G C+ G   +  +    + D +  E G  P  V  +  ++D  C+D     A++ +EEM 
Sbjct: 395 GCCRAGRTDQALQ----YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 450

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G      T+ +++  LC   +  +A  L +EM+  G  P   T +A+++ +C+  +++
Sbjct: 451 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQ 510

Query: 347 KA 348
           KA
Sbjct: 511 KA 512


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 231/455 (50%), Gaps = 33/455 (7%)

Query: 100 TIFHALSTCSDSLCRNSII--------IDMLMLAYVKNMKPH-LGFEAFKRAGDYGLKSS 150
            +F +  +   +LC  S++        +  L+L      +PH      + +     +   
Sbjct: 25  ALFKSALSADRALCPLSVLPHLAASPSLPHLLLTASAAARPHATSLRFYAQLKSLSVPIP 84

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V S + LL +L     F     ++ ++ R R+ L   +FN +L  LC  GK  +A +++ 
Sbjct: 85  VASLHPLLSSLPSAPAFA----LFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLR 140

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGF 269
            M      P  VTYN +I G+C +   G++  A  V ++M E  GI P++ T+ TLI G+
Sbjct: 141 QMP----RPNAVTYNTVIAGFCAR---GRVQAALEVMREMRERGGIAPDKYTYATLISGW 193

Query: 270 CKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           CK   +  A KVF+EM + G +A   V YN+LI G C  GKLD A+  R++M+  G+   
Sbjct: 194 CKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMT 253

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V T N L++          A  + +++   GLSP V TYN LI+ YCKEG  + A  +  
Sbjct: 254 VATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFE 313

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +GV     TY  LI   SR+G V+    +    V  G+R  +V YN L+ + C  G
Sbjct: 314 EMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGG 373

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN-- 506
             ++A  ++ E   MEK++  P+ VTYN LI+GFC  G+L++A GL++E+ ++G+ P+  
Sbjct: 374 DMERAFEIMAE---MEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG 430

Query: 507 ------QTTYQIVREEMMEKGFIPDIEGHMYNISG 535
                     + + +EM+ KG  PD   ++  I G
Sbjct: 431 LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 12/289 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+    K G+ ED   V+ EM  +  +  +   +N ++ G C  GKL+ A    EDM   
Sbjct: 189 LISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQR 248

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           GV+  V TYN+L+      G     Y   AV ++M  NG+ P+  T+N LI+G+CK+ N 
Sbjct: 249 GVAMTVATYNLLVHALFMDGRASDAY---AVLEEMQRNGLSPDVFTYNILINGYCKEGNE 305

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A++VFEEM   G+ A  VTY SLI      G++ E   L    +  G++P+VV  NAL
Sbjct: 306 KKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNAL 365

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           IN  C    +E+A  +  ++ ++ + P  +TYNTLI  +C  GR+++A  + + M  RG+
Sbjct: 366 INSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGI 425

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            PD+        GL + G  +   N+M E+V  G+     TY  L+  L
Sbjct: 426 QPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 147/284 (51%), Gaps = 12/284 (4%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K G+    + +F  + T  + +  ++++ + L+  Y    K  +  +  +     G+ 
Sbjct: 193 WCKIGRMEDAAKVFDEMLTQGE-VAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V + N L+ AL  +G+  D   V +EM+R  +  ++ ++N ++NG CK G   KA ++
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+M   GV    VTY  LI  + +K   G++ + D +FK  V+ GI P+ V +N LI+ 
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRK---GQVQETDRLFKVAVKKGIRPDVVMYNALINS 368

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C   ++  A ++  EM    I    VTYN+LI G C+ G+LDEA  L DEM   G++P+
Sbjct: 369 HCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           +        G CK    + A  L  ++  +G++P   TY +LI+
Sbjct: 429 L--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 222/393 (56%), Gaps = 7/393 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             F    +    G +   ++ N LLR L   GK ++    +  + R+R  L+  S+  ++
Sbjct: 106 FAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLI 165

Query: 194 NGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           NGLCK+G+   A  ++  ++ L  V P V+ Y  +ID +CK   +   Y    ++ +M+ 
Sbjct: 166 NGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYD---LYSEMIV 222

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             I PN VTFN+LI GFC    +  A+ +  EM  + +   V T+N LI+GLC +G++ +
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A ++   M+  G++PNVVT  +L++G+   K V KA+ +F+ IS +G++P+V +Y+ +I+
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK   +++A  +   M  + + P+  TY+ LI GL + G +  V ++++E+ N G  A
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TYN L+  LCK+ +  KA++LL    KM+ E   P++ TY  L+ G C+ G+L+DA 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLT---KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +  +LL KG   N   Y ++   + ++GF  +
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDE 492



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 198/355 (55%), Gaps = 6/355 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           ++  V+    ++ +  K+    D   +Y EM  ++I  N+ +FN ++ G C  G+L +A 
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ +M    V+P V T+NILIDG CK+G +    KA +V   M++ G+ PN VT+ +L+
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVK---KATSVLSVMIKQGVEPNVVTYTSLM 306

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+   + ++ A  VF  +   G+   V +Y+ +INGLC +  +DEAV L  EM    + 
Sbjct: 307 DGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT 366

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN VT ++LI+G CK   +     L D+I+ +G   ++ITYN+L++  CK  +++ A A+
Sbjct: 367 PNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIAL 426

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M D G+ PD+STY  L+ GL + G ++  + I  +L+  G    +  Y +++  LCK
Sbjct: 427 LTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           +G   +A+SLL +   ME     P+ VTY  LI    +  K   A  LL E++ +
Sbjct: 487 EGFFDEALSLLSQ---MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 197/357 (55%), Gaps = 17/357 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DS C++ ++ID               ++ +       +  +V++ N L+      G+ ++
Sbjct: 202 DSFCKDKLVID--------------AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKE 247

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +  EM    +  N+ +FN +++GLCK G++ KA+ ++  M   GV P VVTY  L+D
Sbjct: 248 AVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           GY     + ++ KA  VF  +   G+ PN  +++ +I+G CK++ +  A+K+F+EM    
Sbjct: 308 GYFL---VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN 364

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +    VTY+SLI+GLC  G++ +   L DE+   G   N++T N+L+NG CK   V+KA 
Sbjct: 365 MTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAI 424

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   + ++G+ P + TY TL+D  CK GR++DA  +   +L +G   ++  Y  +I GL
Sbjct: 425 ALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            +EG  +   ++++++ +NG     VTY  L+ AL K+ K+ KAV LL EM   E +
Sbjct: 485 CKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESD 541



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N   P    FN ++    K  +   A+   ++M   GI   + T+N LIN      +L+ 
Sbjct: 47  NNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNF 106

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A ++  +++  G +P+ VT N L+ G C    V++A    D +  +      ++Y TLI+
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVL---PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
             CK G    A  +   +   G+L   PDV  Y  +I    ++  V    ++ +E++   
Sbjct: 167 GLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   +VT+N L+   C  G+ K+AV LL+E   M      PN+ T+N+LI G C++G+++
Sbjct: 225 IYPNVVTFNSLIYGFCIVGQLKEAVGLLNE---MSLNNVNPNVYTFNILIDGLCKEGEVK 281

Query: 490 DANGLLNELLEKGLIPNQTTY 510
            A  +L+ ++++G+ PN  TY
Sbjct: 282 KATSVLSVMIKQGVEPNVVTY 302



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 34/246 (13%)

Query: 310 LDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           LD+AV+  + ++  +   P +   N +++   K    + A      +  +G+ P + T+N
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+ +    ++  AF+M   +L  G  PD  T N L+ GL   G V+   N  + ++  
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLL------------------------------- 457
                 V+Y  L+  LCK G+++ A+ LL                               
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 458 --DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             D   +M  +K +PN+VT+N LI GFC  G+L++A GLLNE+    + PN  T+ I+ +
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 516 EMMEKG 521
            + ++G
Sbjct: 273 GLCKEG 278


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 226/431 (52%), Gaps = 44/431 (10%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  Y +  +P LG   F R    GL   V S N L+    KEG+ +    ++ +M+ 
Sbjct: 122 NILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEE 181

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + I  N+ +++ ++NGLCK  +++KA  ++  M   GV P  +TYN LI GY   G    
Sbjct: 182 QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSG---- 237

Query: 240 MYKADA-VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           M+K    VFK+M  + ++P+    N+ +   CK   I  A  +F+ M   G    V++Y 
Sbjct: 238 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 297

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++G    G +     L + M+  G+ P+    N LIN + +  +++K+ ++F+D+++Q
Sbjct: 298 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 357

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG---------- 408
           G++P +IT++T+I A+C+ GR++DA    N M+D GV PD + Y+CLI G          
Sbjct: 358 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 417

Query: 409 --------------------------LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                                     L +EG V   +++++ +++ G R  L+T+N LV 
Sbjct: 418 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 477

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C  G  K+AV LLD M  +  E   P+I TYN L+ G+C+ G+++DA  L  ++L K 
Sbjct: 478 GYCLVGNMKEAVGLLDSMESVGVE---PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534

Query: 503 LIPNQTTYQIV 513
           +     +Y I+
Sbjct: 535 VTLTSVSYNII 545



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 237/461 (51%), Gaps = 17/461 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P   ++   +H +  +G +     +F  +S  S  L  +    +  M 
Sbjct: 209 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS--SSLLVPDVGNCNSFMT 266

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K+ +     + F      G K  V+S   LL      G    ++ ++  M    +  
Sbjct: 267 ALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVP 326

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +   FN ++N   + G ++K+  + EDM   GV+P ++T++ +I  +C+   +G++  A 
Sbjct: 327 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR---LGRLDDAM 383

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY-NSLING 303
             F  M++ G+ P+   ++ LI G C   ++  A ++  +M S GI    + +  S+IN 
Sbjct: 384 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 443

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC +G++ E   + D ++ +G +PN++T N+L++G+C    +++A  L D +   G+ P 
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           + TYNTL+D YCK GR++DA  +   ML + V     +YN ++ GL +       + + +
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 563

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E++ +GM   + TY  ++G LC++  + +A  LL+++F M  +    +I+T+N++I+   
Sbjct: 564 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF---DILTFNIVIRAMF 620

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI-----VREEMME 519
           + G+ ++A  L   +   GL+P   TY++     ++EE  E
Sbjct: 621 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 661



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 190/357 (53%), Gaps = 21/357 (5%)

Query: 168 EDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNKASDI----------MEDMKSLG 216
           +D  +++ E+  RR         N +L+ L +A       D+          M+      
Sbjct: 54  DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE 113

Query: 217 VSPKVVTYNILIDGY--CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            +P + TYNILI+ Y   ++  +G       VF  ++  G+ P+  ++N LIDGF K+  
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGL-----PVFGRLLRTGLGPDVFSYNALIDGFSKEGE 168

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A  +F +M   GI   VVTY+SLINGLC   ++D+A  +  +M+ +G++PN +T N 
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 228

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+G+    + +++  +F ++S   L P V   N+ + A CK GR+++A  + +SM+ +G
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 288

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PDV +Y  L+ G +  G + G+ N+ N +V  G+      +N L+ A  + G   K++
Sbjct: 289 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 348

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            + ++   M K+   P+I+T++ +I  FC+ G+L+DA    N +++ G+ P+   Y 
Sbjct: 349 LMFED---MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 402



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 220/450 (48%), Gaps = 14/450 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           +  S+V+    P + S+   LH +   G    +  +F+ +    + +  +  + + L+ A
Sbjct: 280 IFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM--VCEGVVPDRHVFNTLINA 337

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +          F+     G+   +++ + ++ A  + G+ +D    +  M    +  +
Sbjct: 338 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 397

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NILIDGYCKKGGIGKMYKAD 244
              ++ ++ G C    L KA +++ DM S G+ P  + +   +I+  CK+G   ++ +  
Sbjct: 398 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG---RVAEGK 454

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V   ++  G  PN +TFN+L+DG+C   N+  A+ + + M S G+   + TYN+L++G 
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G++D+A+ L  +M+   +    V+ N +++G  + +    A+ +F ++ E G++ S+
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 574

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY T++   C+    ++A  +   +    V  D+ T+N +I  + + G  +  + +   
Sbjct: 575 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 634

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFC 483
           +   G+   ++TY +++  L K+   + A    D +F  MEK    P+    N +I+   
Sbjct: 635 ISTYGLVPTILTYRVMITNLIKEESFEDA----DNLFSSMEKSSCTPDSRILNEIIRMLL 690

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            KG++  A   L+++ +KG++P  TT  ++
Sbjct: 691 NKGEVAKAGNYLSKIDKKGILPEATTTSLL 720



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 3/313 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
             ++  L KEG+  + + V   +       NL +FN +++G C  G + +A  +++ M+S
Sbjct: 438 TSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 497

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +GV P + TYN L+DGYCK G I     A  +F+DM+   +    V++N ++ G  +   
Sbjct: 498 VGVEPDIYTYNTLVDGYCKHGRIDD---ALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A ++F EM   G+A  + TY +++ GLC +   DEA  L +++ +  +K +++T N 
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I    K    ++A+ LF  IS  GL P+++TY  +I    KE   EDA  + +SM    
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD    N +I  L  +G V    N ++++   G+     T ++L+     +GK ++ +
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734

Query: 455 SLLDEMFKMEKEK 467
            LL E ++  +E+
Sbjct: 735 KLLPEKYRFLREQ 747



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 25/181 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS------------ 116
           +LH L  A++    +   H  +++G   S+    H  +T    LCRN+            
Sbjct: 545 ILHGLFQARRTIVAKEMFHEMIESGMAVSI----HTYATVLGGLCRNNCTDEANMLLEKL 600

Query: 117 ---------IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
                    +  ++++ A  K  +     E F     YGL  ++L+   ++  L+KE  F
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ED + ++  M++     +    N ++  L   G++ KA + +  +   G+ P+  T ++L
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 720

Query: 228 I 228
           I
Sbjct: 721 I 721


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 235/476 (49%), Gaps = 87/476 (18%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF+    +G+   +  CN +LRAL  E +++D+  VY EM +  IE ++ ++N +L
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 194 NGLCKAGKLNKASDIMEDMKSL--GVSPKVVTYNILIDGYCKKGGI-------------- 237
           +   + G++++A+ ++ +M++   G  P  VTYN++I+G  +KG +              
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G + KA A+  +M   GI+P  VT+NT+I G  +  N+ AA  
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM + G+   ++TYNSLING C  G L EA+ L  ++  +GL P+V+T N L++G+C
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 341 -----------KKKLVEKA------------------------RVLFDDISEQGLSPSVI 365
                      K+++VE+                         R  FD++  +GL P   
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNT I A    G   +AF +   M+ RG+  D  TYN  + GL + GN++    +  ++
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V++G++   +TY  L+ A C+ G+ ++A  + D M         P+ VTY V I  +C++
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLP---PSAVTYTVFIHAYCRR 595

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           G L  A G   ++LE+G+ PN+ TY ++                  EM+E+G  P+
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 199/365 (54%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++ N ++  + + G  E     + EM+   +  +L ++N ++NG CKAG L +A
Sbjct: 332 GIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEA 391

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  D+K  G++P V+TYNIL+DGYC+   +G + +A    ++MVE G  P+  T+  L
Sbjct: 392 LWLFGDLKRAGLAPSVLTYNILLDGYCR---LGDLEEARRFKQEMVEQGCQPDVSTYTIL 448

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G  K  N++   + F+EM S G+      YN+ I+   + G   EA  L + M++ G+
Sbjct: 449 MNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + VT N  ++G CK   ++ A VL+  +   GL P  ITY  LI A+C+ GR+ +A  
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARD 568

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + ML  G+ P   TY   I    R GN+        +++  G+R   VTYN+L+ ALC
Sbjct: 569 IFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALC 628

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G++  A     EM +       PN  TY +LI G C++G  E+A  L +E+ + G+ P
Sbjct: 629 RMGRTNLAYQHFHEMLERGLS---PNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHP 685

Query: 506 NQTTY 510
           +  T+
Sbjct: 686 DHCTH 690



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A F++M  +G+ P     N ++     +        V+ EM   GI   +VTYN+L++  
Sbjct: 182 AAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSF 241

Query: 305 CVDGKLDEAVALRDEMMA--SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             +G++D+A  L  EM A   G  P+ VT N +ING  +K  +EKA  L D +       
Sbjct: 242 FREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKA 300

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           S  T+N LI  Y   G +E A A++  M + G++P V TYN +I G+ R GNVE  R   
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+   G+   L+TYN L+   CK G  K+A+ L  +   +++    P+++TYN+L+ G+
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGD---LKRAGLAPSVLTYNILLDGY 417

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI-------------VRE---EMMEKGFIPDI 526
           C+ G LE+A     E++E+G  P+ +TY I             VRE   EM+ KG  PD 
Sbjct: 418 CRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDC 477

Query: 527 EGHMYNISG 535
             +   IS 
Sbjct: 478 FAYNTRISA 486



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 167/384 (43%), Gaps = 53/384 (13%)

Query: 84  SFLHMFVKNGKFTSVSTIF---HALSTCSDSLCRNSIIIDMLMLAYVK--NMKPHLG-FE 137
           + +H   ++G   +    F    A+    D +  NS+I       Y K  N+K  L  F 
Sbjct: 342 TIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLIN-----GYCKAGNLKEALWLFG 396

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
             KRAG   L  SVL+ N LL    + G  E+     +EM  +  + ++ ++  ++NG  
Sbjct: 397 DLKRAG---LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453

Query: 198 KA-----------------------------------GKLNKASDIMEDMKSLGVSPKVV 222
           K                                    G  ++A  + E M S G+S   V
Sbjct: 454 KVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTV 513

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYNI +DG CK G +   Y    ++  MV +G+ P+ +T+  LI   C+   +  A  +F
Sbjct: 514 TYNIFLDGLCKSGNLKDAY---VLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           + M   G+    VTY   I+  C  G L  A     +M+  G++PN VT N LI+  C+ 
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                A   F ++ E+GLSP+  TY  LID  CKEG  E+A  + + M   G+ PD  T+
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690

Query: 403 NCLIAGLSREGNVEGVRNIMNELV 426
           N L  G   EG  +     M  +V
Sbjct: 691 NALFKGFD-EGQSKHAIQYMENVV 713



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 5/247 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+    + N  + A +  G   +   + + M  R I  +  ++N  L+GLCK+G L  A
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M S G+ P  +TY  LI  +C++   G++ +A  +F  M+ +G+ P+ VT+   
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCER---GRLREARDIFDGMLVSGLPPSAVTYTVF 588

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  +C+  N+ +A   F++M   G+    VTYN LI+ LC  G+ + A     EM+  GL
Sbjct: 589 IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGL 648

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T   LI+G CK+   E+A  L+ ++ + G+ P   T+N L   +  EG+ + A  
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQ 707

Query: 386 -MRNSML 391
            M N +L
Sbjct: 708 YMENVVL 714


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 223/441 (50%), Gaps = 46/441 (10%)

Query: 110 DSLCRNSIIIDMLML-----AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D +C   +  D+ +      A+    +     E F++    G+  +V++ N ++  L K 
Sbjct: 186 DIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKN 245

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ ++     ++M++ R++ +L ++  ++NGL K  + ++A+ I+++M   G +P  V Y
Sbjct: 246 GRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVY 305

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LIDGYC+   IG +  A  +  DM+ NGI PN VT N+LI G+CK   +  A  + EE
Sbjct: 306 NTLIDGYCR---IGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEE 362

Query: 285 MGSHGIAAGVVTYNS-----------------------------------LINGLCVDGK 309
           M + G      T+ S                                   L++GLC +GK
Sbjct: 363 MLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGK 422

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             EA+ L   ++  G   N VTSNALI+G C+    E+A  L  ++ E+GL    I+YNT
Sbjct: 423 QSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNT 482

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI A CKEG++E+ F ++  M+ RG+ PD+ TYN L+ GL   G +E    + +E   NG
Sbjct: 483 LILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                 TY I++   CK  + ++   L  EM  M+ E+   N V Y  LI+ +C+ G + 
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ---NAVVYGTLIRAYCENGNMR 599

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L +++  +G+     TY
Sbjct: 600 EAFRLRDDMRSRGIPQTSATY 620



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 217/419 (51%), Gaps = 18/419 (4%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMK----PHLGFEAFKRAG--DYGLKSSVLSCNQLLRALV 162
           S+ +  NS+  + L+  Y K+ +     HL  E     G  + G  +SV+        L 
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI------HRLC 383

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
            + +F+       EM  R  + N      +++GLC+ GK ++A ++   +   G +   V
Sbjct: 384 LKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTV 443

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T N LI G C+ G      +A  + K+M+E G++ + +++NTLI   CK+  +    K+ 
Sbjct: 444 TSNALIHGLCEAG---SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           EEM   GI   + TYN L++GLC  GK++EA  L  E   +G  P+  T   +I+G+CK 
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             VE+   LF ++    +  + + Y TLI AYC+ G M +AF +R+ M  RG+    +TY
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATY 620

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + LI GLS  G V+    +++E+   G+   +V Y  L+G  CK G+  K  S+L E   
Sbjct: 621 SSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQE--- 677

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           M      PN +TY ++I G C+ G ++ A  LLNE+ +KG++P+  TY  +     ++G
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEG 736



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 231/457 (50%), Gaps = 51/457 (11%)

Query: 100 TIFHALSTCSDSLCRNSI---IIDMLMLAYVKNMKPHLGF----EAFKRAGDYGLKSSVL 152
           T F+     S++L   ++   ++D+L+  Y    K HLGF    E F    + GL  S+ 
Sbjct: 105 TAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFK-HLGFGVVFELFSLLANKGLFPSLK 163

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +CN LL +LVK  + +    V+  M    +  ++  F+ ++N  C  G+++ A ++   M
Sbjct: 164 TCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM 223

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCK 271
           + +GV+P VVTYN +I G CK G + + ++    FK+ +E   + P+ VT+  LI+G  K
Sbjct: 224 EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ----FKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            E    A  + +EM   G A   V YN+LI+G C  G +  A+ +RD+M+++G+ PN VT
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339

Query: 332 SNALINGFCKKKLVEKARVLFDD------ISEQGLSPSVI-------------------- 365
            N+LI G+CK   +E A  L ++      +  QG   SVI                    
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399

Query: 366 ---------TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
                        L+   C+ G+  +A  +   +L++G   +  T N LI GL   G+ E
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ E++  G+    ++YN L+ A CK+GK ++   L +EM +   +   P++ TYN
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQ---PDMYTYN 516

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L+ G C  GK+E+A GL +E  + G  P+  TY I+
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 193/368 (52%), Gaps = 6/368 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  ++ +L+    +N K     E + R  + G  ++ ++ N L+  L + G  E+   + 
Sbjct: 406 NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLL 465

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM  R + L+  S+N ++   CK GK+ +   + E+M   G+ P + TYN+L+ G C  
Sbjct: 466 KEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCN- 524

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +GK+ +A  ++ +  +NG  P+  T+  +IDG+CK   +    K+F+EM +  I    
Sbjct: 525 --MGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y +LI   C +G + EA  LRD+M + G+     T ++LI+G     LV+ A  L D+
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDE 642

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + ++GLSP+V+ Y  LI  YCK G+M    ++   M    V P+  TY  +I G  + GN
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGN 702

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    ++NE+   G+    VTYN L    CK+GK ++A+ + D    M       + +T
Sbjct: 703 MKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD---LMSTGGISLDDIT 759

Query: 475 YNVLIKGF 482
           Y  LI G+
Sbjct: 760 YTTLIDGW 767



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 186/369 (50%), Gaps = 59/369 (15%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P + T N L+    K   +   Y+   VF  M   G+ P+   F+T+++ FC    +
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQ---VFDIMCHCGVTPDVYLFSTMVNAFCTGGRV 213

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+++F +M   G+A  VVTYN++I+GLC +G+LDEA   +++M    +KP++VT   L
Sbjct: 214 DDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVL 273

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING  K +  ++A  +  ++S++G +P+ + YNTLID YC+ G +  A  +R+ M+  G+
Sbjct: 274 INGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGI 333

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--MRAGLVT----------------- 436
            P+  T N LI G  +   +E   +++ E++  G  +  G  T                 
Sbjct: 334 SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALL 393

Query: 437 ----------------YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
                             +LV  LC++GK  +A+ L    +++ ++    N VT N LI 
Sbjct: 394 FIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIEL---WYRLLEKGFAANTVTSNALIH 450

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G C+ G  E+A  LL E+LE+GL+ +  +Y                  ++EEM+ +G  P
Sbjct: 451 GLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQP 510

Query: 525 DIEGHMYNI 533
           D+  + YN+
Sbjct: 511 DM--YTYNM 517



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 221 VVTYNILIDGYC---KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           V   ++LI  Y    K  G G +++   +F  +   G+ P+  T N L+    K   +  
Sbjct: 124 VTVVDLLIHVYSTQFKHLGFGVVFE---LFSLLANKGLFPSLKTCNFLLSSLVKANEVKM 180

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           + +VF+ M   G+   V  +++++N  C  G++D+A+ L  +M   G+ PNVVT N +I+
Sbjct: 181 SYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIH 240

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK   +++A    + + ++ + PS++TY  LI+   K  R ++A  +   M DRG  P
Sbjct: 241 GLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAP 300

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +   YN LI G  R GN+     I +++++NG+    VT N L+   CK  + + A  LL
Sbjct: 301 NNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL 360

Query: 458 DEM------------------------------FKMEKEKK--WPNIVTYNVLIKGFCQK 485
           +EM                              F ME   +   PN     +L+ G CQ 
Sbjct: 361 EEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQN 420

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           GK  +A  L   LLEKG   N  T   +   + E G
Sbjct: 421 GKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 54/406 (13%)

Query: 3   CSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHS 62
           C  +S +  I E++       L+N  PN  +L L  S           C + K+   S +
Sbjct: 386 CRFDSALLFIMEML-------LRNFKPNDGLLTLLVSG---------LCQNGKQ---SEA 426

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           + L  RLL     A       + +H   + G     + +   +      L  +SI  + L
Sbjct: 427 IELWYRLLEKGFAANTVTS-NALIHGLCEAGSKEEAAKLLKEM--LERGLVLDSISYNTL 483

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +LA  K  K   GF+  +     G++  + + N LL  L   GK E+   ++ E K+   
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG------ 236
             +  ++  +++G CKA ++ +   + ++M ++ +    V Y  LI  YC+ G       
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603

Query: 237 --------------------------IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
                                     IG +  A+ +  +M + G+ PN V +  LI G+C
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +     + +EM  + +    +TY  +ING C  G +  A  L +EM   G+ P+ V
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           T NAL NGFCK+  +E+A  + D +S  G+S   ITY TLID + K
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  +V+    L+    K G+   V+ + +EM    +  N  ++  ++NG CK G +  A
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAA 706

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + ++ +M   G+ P  VTYN L +G+CK+G   KM +A  V   M   GI  +++T+ TL
Sbjct: 707 AKLLNEMAQKGIVPDAVTYNALTNGFCKEG---KMEEALKVCDLMSTGGISLDDITYTTL 763

Query: 266 IDGFCKDENISA 277
           IDG+ K   +S+
Sbjct: 764 IDGWHKPLTVSS 775


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 208/367 (56%), Gaps = 9/367 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V++ N L+    K G   ++    + + R  +  ++ ++N +L  LC +GKL 
Sbjct: 173 DSGAVPDVITYNVLISGYCKTG---EIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 229

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A ++++        P V+TY ILI+  CK+ G+G+  K   +  +M + G  P+ VT+N
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK---LLDEMRDKGCKPDVVTYN 286

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+G CK+  +  A++    M S+G    V+T+N ++  +C  G+  +A     EM+  
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+VVT N LIN  C+K L+ +A  + + + + G +P+ ++YN L+ A CK+ +ME A
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
               + M+ RG  PD+ TYN L+  L ++G V+    I+N+L + G    L+TYN ++  
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L K GK+  A+ LLDE   M+ +   P+I+TY+ L+ G  ++GK+++A    ++L E G+
Sbjct: 467 LSKVGKTDDAIKLLDE---MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGV 523

Query: 504 IPNQTTY 510
            PN  TY
Sbjct: 524 KPNAITY 530



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 238/471 (50%), Gaps = 21/471 (4%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIF 102
           ++R  C + K  +A+       R++  L  +   P + ++   +  + K G+  S   + 
Sbjct: 151 LIRGLCKTGKTWKAT-------RVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLL 203

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             +S   D +  N+I+  +     +K        E   R         V++   L+ A  
Sbjct: 204 DRMSVSPDVVTYNTILRTLCDSGKLKE-----AMEVLDRQMQRECYPDVITYTILIEATC 258

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KE        +  EM+ +  + ++ ++N ++NG+CK G+L++A   +  M S G  P V+
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T+NI++   C  G   +   A+    +M+  G  P+ VTFN LI+  C+   I  A+ V 
Sbjct: 319 THNIILRSMCSTG---RWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVL 375

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M  HG     ++YN L++ LC D K++ A+   D M++ G  P++VT N L+   CK 
Sbjct: 376 EKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 435

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V+ A  + + +  +G SP +ITYNT+ID   K G+ +DA  + + M  +G+ PD+ TY
Sbjct: 436 GKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITY 495

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GLSREG V+      ++L   G++   +TYN ++  LCK  ++ +A+  L  M  
Sbjct: 496 STLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA 555

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              +   P   +Y +LI+G   +G  ++A  LLNEL  +G++   +  Q+V
Sbjct: 556 RGCK---PTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVV 603



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 203/388 (52%), Gaps = 32/388 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  LR LV+ G+ E+     ++M  R    ++ +   ++ GLCK GK  KA+ +ME ++ 
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 215 LGVSPKVVTYNILIDGYCKKGGIG-----------------------------KMYKADA 245
            G  P V+TYN+LI GYCK G IG                             K+ +A  
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V    ++    P+ +T+  LI+  CK+  +  AMK+ +EM   G    VVTYN LING+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G+LDEA+   + M + G +PNV+T N ++   C       A     ++  +G SPSV+
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+N LI+  C++G +  A  +   M   G  P+  +YN L+  L ++  +E     ++ +
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V+ G    +VTYN L+ ALCKDGK   AV +L+++     +   P ++TYN +I G  + 
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL---GSKGCSPVLITYNTVIDGLSKV 470

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV 513
           GK +DA  LL+E+  KGL P+  TY  +
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTL 498



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 141/265 (53%), Gaps = 6/265 (2%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           EV  N  +    ++  +    K  E+M   G    ++   SLI GLC  GK  +A  + +
Sbjct: 110 EVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVME 169

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  SG  P+V+T N LI+G+CK   +  A  L D +S   +SP V+TYNT++   C  G
Sbjct: 170 ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSG 226

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++++A  + +  + R   PDV TY  LI    +E  V     +++E+ + G +  +VTYN
Sbjct: 227 KLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +L+  +CK+G+  +A+  L+ M     +   PN++T+N++++  C  G+  DA   L E+
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQ---PNVITHNIILRSMCSTGRWMDAEKFLAEM 343

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFI 523
           + KG  P+  T+ I+   +  KG I
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLI 368



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 165/364 (45%), Gaps = 39/364 (10%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFE 137
           YP + ++  +     K + V      L    D  C+  ++  ++L+    K  +      
Sbjct: 244 YPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIR 303

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
                  YG + +V++ N +LR++   G++ D E    EM R+    ++ +FN ++N LC
Sbjct: 304 FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLC 363

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           + G + +A D++E M   G +P  ++YN L+   CK     KM +A      MV  G  P
Sbjct: 364 RKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK---KMERAIEYLDIMVSRGCYP 420

Query: 258 NEVTFNTL-----------------------------------IDGFCKDENISAAMKVF 282
           + VT+NTL                                   IDG  K      A+K+ 
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   G+   ++TY++L+ GL  +GK+DEA+A   ++   G+KPN +T N+++ G CK 
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           +   +A      +  +G  P+  +Y  LI+    EG  ++A  + N +  RGV+   S  
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600

Query: 403 NCLI 406
             ++
Sbjct: 601 QVVV 604



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 6/233 (2%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V  N+ +  L  +G+L+E     ++M+  G  P+++   +LI G CK     KA  + + 
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + + G  P VITYN LI  YCK G +  A  + + M    V PDV TYN ++  L   G 
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +++  +       ++TY IL+ A CK+    +A+ LLDEM   +K  K P++VT
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM--RDKGCK-PDVVT 284

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           YNVLI G C++G+L++A   LN +   G  PN  T+ I+   M   G   D E
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE 337



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 22/176 (12%)

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G +E+ F     M+ RG +PD+     LI GL + G       +M  L ++G    ++
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN+L+   CK G+   A+ LLD M         P++VTYN +++  C  GKL++A  +L
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM------SVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 496 NELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
           +  +++   P+  TY I+ E                EM +KG  PD+  +   I+G
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/523 (31%), Positives = 254/523 (48%), Gaps = 28/523 (5%)

Query: 32  VILQLFNSD----ADPVLILRYFCWSTKELRASHSLLLTGRLLHS---------LVVAKK 78
           V+  L  SD    A P  +   F  S+  L+   S LL   LL+          L  A +
Sbjct: 77  VLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALR 136

Query: 79  ----YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
               YP   S    L   VK  +F     +F  L+        +  +    + A VK   
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVF--LNILESDFRPSKFMYGKAIQAAVKLSD 194

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
              G E F R     +  SV   N L+  L K  +  D E ++ EM  RR+  +L ++N 
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++G CKAG   K+  + E MK+  + P ++T+N L+ G  K G +     A+ V K+M 
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED---AENVLKEMK 311

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G +P+  TF+ L DG+  +E   AA+ V+E     G+     T + L+N LC +GK++
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  +    MA GL PN V  N +I+G+C+K  +  AR+  + + +QG+ P  + YN LI
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             +C+ G ME+A    N M  +GV P V TYN LI G  R+   +   +I+ E+ +NG  
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +V+Y  L+  LCK  K  +A  +  +   ME     P +  YN+LI G C KGK+EDA
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRD---MEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
                E+L+KG+  N  TY  + + +   G + + E  +  IS
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 210/430 (48%), Gaps = 47/430 (10%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I  + L+  Y K   P   F+  +R     ++ S+++ N LL+ L K G  ED E V KE
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309

Query: 177 MKR-----------------------------------RRIELNLDSFNFVLNGLCKAGK 201
           MK                                      +++N  + + +LN LCK GK
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-IGKMYKADAVFKDMVENGILPNEV 260
           + KA +I+    + G+ P  V YN +IDGYC+KG  +G   K +A    M + G+ P+ +
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA----MEKQGMKPDHL 425

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            +N LI  FC+   +  A K   +M   G++  V TYN LI G     + D+   +  EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
             +G  PNVV+   LIN  CK   + +A+++  D+ ++G+SP V  YN LID  C +G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           EDAF     ML +G+  ++ TYN LI GLS  G +    +++ E+   G++  + TYN L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +      G  ++ ++L +E   M++    P + TY++LI   C K  +E    L  E+  
Sbjct: 606 ISGYGFAGNVQRCIALYEE---MKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM-- 659

Query: 501 KGLIPNQTTY 510
             L P+   Y
Sbjct: 660 -SLKPDLLVY 668



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 221/466 (47%), Gaps = 67/466 (14%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++    +L   Y  N K       ++ A D G+K +  +C+ LL AL KEGK E  E + 
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377

Query: 175 -----------------------------------KEMKRRRIELNLDSFNFVLNGLCKA 199
                                              + M+++ ++ +  ++N ++   C+ 
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGIL 256
           G++  A   +  MK  GVSP V TYNILI GY      G+ Y+ D  F   K+M +NG +
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGY------GRKYEFDKCFDILKEMEDNGTM 491

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN V++ TLI+  CK   +  A  V  +M   G++  V  YN LI+G C  GK+++A   
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM+  G++ N+VT N LI+G      + +A  L  +IS +GL P V TYN+LI  Y  
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G ++   A+   M   G+ P + TY+ LI+  ++EG +E    +  E+    ++  L+ 
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLV 667

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN ++      G  +KA +L  +M  +EK     +  TYN LI G  + GKL +   L++
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQM--IEKSIGL-DKTTYNSLILGQLKVGKLCEVRSLID 724

Query: 497 ELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           E+  + + P   TY I+                  EM EKGF+ D+
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 12/354 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  SV + N L+    ++ +F+    + KEM+      N+ S+  ++N LCK  KL +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  DM+  GVSPKV  YN+LIDG C KG I   ++     K+M++ GI  N VT+NTL
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS---KEMLKKGIELNLVTYNTL 570

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG      +S A  +  E+   G+   V TYNSLI+G    G +   +AL +EM  SG+
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP + T + LI+  C K+ +E    LF ++S   L P ++ YN ++  Y   G ME AF 
Sbjct: 631 KPTLKTYHLLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFN 686

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           ++  M+++ +  D +TYN LI G  + G +  VR++++E+    M     TYNI+V   C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +      A     EM    +EK +  ++   N L+ G  ++ + ++A  +++E+
Sbjct: 747 EVKDYMSAYVWYREM----QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 154/295 (52%), Gaps = 9/295 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+   V   N L+     +GK ED     KEM ++ IELNL ++N +++GL   GKL+
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D++ ++   G+ P V TYN LI GY   G  G + +  A++++M  +GI P   T++
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTLKTYH 638

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI   C  E I    ++F EM    +   ++ YN +++   V G +++A  L+ +M+  
Sbjct: 639 LLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            +  +  T N+LI G  K   + + R L D+++ + + P   TYN ++  +C+      A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +     M ++G L DV   N L++GL  E   +    +++E+  NG   G VT +
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM--NGRMLGDVTVD 807


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 224/404 (55%), Gaps = 12/404 (2%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +N K   G+E F +    G+   + + N+LL  L K+G  ++ E +  ++ +R +  N
Sbjct: 192 YEENFKDE-GYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPN 250

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L ++NF + GLC+ G+L+ A  ++  +   G  P VVTYN LI G CK     K  +A+ 
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN---SKFQEAEV 307

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
               +V  G+ P+  T+NTLI G+CK   +  A ++      +G      TY SLI+GLC
Sbjct: 308 YLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLC 367

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G+ + A+AL +E +  G+KPNV+  N LI G   + L+ +A  L  ++SE+GL P V 
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQ 427

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+N L++  CK G + DA  +   M+ +G  PD+ T+N LI G S +  +E    I++ +
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQ 484
           ++NG+   + TYN L+  LCK  K +  +    E +K   EK   PN+ T+N+L++  C+
Sbjct: 488 MDNGVDPDVYTYNSLLNGLCKTSKYEDVM----ETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             KL+ A GLL E+  K + P+  T+  + +   + G   D++G
Sbjct: 544 YHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG---DLDG 584



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 206/426 (48%), Gaps = 24/426 (5%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M  Y +  K       F+R   Y  + +V S N ++  LV  G F+    VY  M+ R I
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGI 142

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             ++ SF   +   C+  + + A  ++ +M S G    VV Y  ++ G+ ++    + Y+
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +F  M+ +G+     TFN L+   CK  ++    K+ +++   G+   + TYN  I 
Sbjct: 203 ---LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQ 259

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC  G+LD AV +   ++  G KP+VVT N LI G CK    ++A V    +  +GL P
Sbjct: 260 GLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEP 319

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
              TYNTLI  YCK G ++ A  +  + +  G +PD  TY  LI GL  EG       + 
Sbjct: 320 DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALF 379

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           NE +  G++  ++ YN L+  L   G   +A  L  E   M ++   P + T+N+L+ G 
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASE---MSEKGLIPEVQTFNILVNGL 436

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           C+ G + DA+GL+  ++ KG  P+  T+ I                + + MM+ G  PD+
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDV 496

Query: 527 EGHMYN 532
             + YN
Sbjct: 497 --YTYN 500



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 191/404 (47%), Gaps = 33/404 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS-FNFVLNGLCKAGKLNK 204
           G K ++ +   ++  L   GKFE +E V  +M++      L+  +   +    + GK+ +
Sbjct: 35  GFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 205 ASDIMEDMKSLGVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           A ++ E M      P V +YN    IL+D        G   +A  V+  M + GI P+  
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSILVDS-------GYFDQAHKVYMRMRDRGITPDVY 147

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           +F   +  FC+     AA+++   M S G    VV Y +++ G   +   DE   L  +M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +ASG+   + T N L++  CKK  V++   L D + ++G+ P++ TYN  I   C++G +
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  M   ++D+G  PDV TYN LI GL +    +     + +LVN G+     TYN L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 441 VGALCKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +   CK G  + A  +L + +F        P+  TY  LI G C +G+   A  L NE L
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFN----GFVPDEFTYRSLIDGLCHEGETNRALALFNEAL 383

Query: 500 EKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
            KG+ PN   Y                  +  EM EKG IP+++
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQ 427



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 171/325 (52%), Gaps = 4/325 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   G+K +V+  N L++ L  +G   +   +  EM  + +   + +FN ++NGLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G ++ A  +++ M S G  P + T+NILI GY  +    KM  A  +   M++NG+ P+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL---KMENALEILDVMMDNGVDPD 495

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+L++G CK       M+ ++ M   G A  + T+N L+  LC   KLD+A+ L +
Sbjct: 496 VYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLE 555

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL-SPSVITYNTLIDAYCKE 377
           EM    + P+ VT   LI+GFCK   ++ A  LF  + E  + S S  TYN +I A+ ++
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEK 615

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +  A  +   M+DR + PD  TY  ++ G  + GNV+     + E++ NG    L T 
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTL 675

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
             ++  LC + +  +A  ++  M +
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            ++L+  Y   +K     E      D G+   V + N LL  L K  K+EDV   YK M 
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +    NL +FN +L  LC+  KL+KA  ++E+MK+  V+P  VT+  LIDG+CK G + 
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 239 KMYKADAVFKDMVENGILP-NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
             Y    +F+ M E  ++  +  T+N +I  F +  N++ A K+F+EM    +     TY
Sbjct: 584 GAY---TLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
             +++G C  G +D       EMM +G  P++ T   +IN  C +  V +A  +   + +
Sbjct: 641 RLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700

Query: 358 QGLSPSVITYNTLIDAYCKE 377
           +GL P  +  NT+ D   KE
Sbjct: 701 KGLVPEAV--NTIFDHDKKE 718



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 16/160 (10%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGV 418
           + P ++  +      C++  M+ A  M NSM  + G    +STY  +I  L   G  E +
Sbjct: 1   MGPPLLPKHVTTVIRCQKDPMK-ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAM 59

Query: 419 RNI---MNELVNNGMRAGLVTYNILVGAL---CKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +   M + V N M  G     + VGA+    + GK ++AV++ + M   + E   P +
Sbjct: 60  EEVLVDMRQNVGNHMLEG-----VYVGAMKNYGRKGKVQEAVNVFERMDFYDCE---PTV 111

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
            +YN ++      G  + A+ +   + ++G+ P+  ++ I
Sbjct: 112 FSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 230/452 (50%), Gaps = 20/452 (4%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LL  + +    P +++F   +H   K G+        H  +   D +       D L+ 
Sbjct: 256 KLLEEMFLMGCEPDVQTFNDVIHGLCKAGRI-------HEAAKLHDRMLLRDFTADALIQ 308

Query: 125 AYVKNMKPHLGF--EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV-EYVYKEMKRRR 181
            Y+ +    +G   EA          ++VL  N L+   V  G+FE+  + +YK M    
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLY-NTLINGYVVSGRFEEAKDLLYKNMVIAG 367

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            E +  +FN +++GLCK G L  A + +++M   G  P V+TY ILIDG+CK+G      
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQG---HFE 424

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  V   M   G+  N V +N LI   CKD  I  A++++ EM S G    + T+NSLI
Sbjct: 425 EASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC + K++EA+ L  +M+  G+  N VT N LI+ F + +L+++A  L  ++  +G  
Sbjct: 485 YGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCP 544

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              ITYN LI A CK G  E    +   M    + P +++ N LI    R G V      
Sbjct: 545 LDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQF 604

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + +++  G+   +VTYN L+  LCK G+ ++A++L +    ++ +   P+ VTYN LI  
Sbjct: 605 LRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN---GLQAKGIHPDAVTYNTLISR 661

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +C +G   DA  LL + +  G IPN+ T+ I+
Sbjct: 662 YCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 211/396 (53%), Gaps = 9/396 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NSII  ML+ A  +N + +   +  +     G +  V + N ++  L K G+  +   ++
Sbjct: 234 NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLH 293

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    +     ++++GLC+ GK+++A  ++  + +    P  V YN LI+GY   
Sbjct: 294 DRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVS 349

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +    D ++K+MV  G  P+  TFN +IDG CK   + +A++  +EM   G    V
Sbjct: 350 GRFEE--AKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY  LI+G C  G  +EA  + + M A GL  N V  N LI   CK   ++ A  ++ +
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S +G  P + T+N+LI   CK  +ME+A  +   ML  GV+ +  TYN LI    R   
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    ++ E+   G     +TYN L+ ALCK G ++K + L+++MF    E+ +P+I +
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMF---GEEIFPSINS 584

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            N+LI  FC+ GK+ DA   L +++++GL P+  TY
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTY 620



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 218/461 (47%), Gaps = 33/461 (7%)

Query: 6   NSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLL 65
           N  I  + +  R H  +KL +     ++L+ F +DA   LI  Y           H L  
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDR----MLLRDFTADA---LIQGYL---------MHGLCR 317

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
            G++  +  +  K P   + L+  + NG   S            D L +N +I      A
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVS-----GRFEEAKDLLYKNMVIAGFEPDA 372

Query: 126 YVKNM-------KPHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  N+       K +L    E        G + +V++   L+    K+G FE+   V   
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  + + LN   +N ++  LCK GK+  A  +  +M S G  P + T+N LI G CK   
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND- 491

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             KM +A  +++DM+  G++ N VT+NTLI  F + E I  A K+  EM   G     +T
Sbjct: 492 --KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI  LC  G  ++ + L ++M    + P++ + N LIN FC+   V  A     D+ 
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++GL+P ++TYN+LI+  CK GR ++A  + N +  +G+ PD  TYN LI+    EG   
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
               ++ + V+NG     +T++IL+    K+    +  ++L
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 204/463 (44%), Gaps = 88/463 (19%)

Query: 137 EAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           + F++AG   G   S      L+  L   G+F+ ++ + K+MK          F  ++  
Sbjct: 79  DLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRY 138

Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDM 250
             KAG   +A+ ++ DM  +    P   +YN    IL+ G C K        A  VF DM
Sbjct: 139 YGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPK-------VAPNVFYDM 191

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +  GI P   TF  ++  FC    + +A  +  +M  HG     + Y  LI+ L  + ++
Sbjct: 192 LSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRV 251

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-----RVLFDDISEQGL----- 360
           +EA+ L +EM   G +P+V T N +I+G CK   + +A     R+L  D +   L     
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311

Query: 361 ---------------------SPSVITYNTLIDAY------------------------- 374
                                +P+ + YNTLI+ Y                         
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371

Query: 375 -----------CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
                      CK+G +  A    + M+ +G  P+V TY  LI G  ++G+ E    ++N
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +   G+    V YN L+GALCKDGK + A+ +  E   M  +   P+I T+N LI G C
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE---MSSKGCKPDIYTFNSLIYGLC 488

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG 521
           +  K+E+A GL  ++L +G+I N  TY       +R E++++ 
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 256/537 (47%), Gaps = 82/537 (15%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRS-FLHMFVKNG--KFTSVSTIFHALSTCSDSLCRNSI 117
           H+ L    ++H LV + +    +S  L M  ++G  +   V+++    S C      N  
Sbjct: 111 HTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS----NDS 166

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           + D+L+  YV+  K     EAF      G   S+ +CN L+ +LV+ G  E    VY+E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-- 235
            R  + +N+ + N ++N LCK GK+ K    +  ++  GV P +VTYN LI  Y  KG  
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 236 -----------------GI-------------GKMYKADAVFKDMVENGILPNEVTFNTL 265
                            G+             GK  +A  VF +M+ +G+ P+  T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA---------- 315
           +   CK  ++    KVF +M S  +   +V ++S+++     G LD+A+           
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 316 -------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                                    LR+EM+  G   +VVT N +++G CK+K++ +A  
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF++++E+ L P   T   LID +CK G +++A  +   M ++ +  DV TYN L+ G  
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G+++  + I  ++V+  +    ++Y+ILV ALC  G   +A  + DEM  + K  K P
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM--ISKNIK-P 583

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP-----NQTTYQIVREEMMEKGF 522
            ++  N +IKG+C+ G   D    L +++ +G +P     N   Y  VREE M K F
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 214/407 (52%), Gaps = 24/407 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F      GL     +   LL    K+G   + E V+ +M+ R +  +L  F+ +++  
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            ++G L+KA      +K  G+ P  V Y ILI GYC+KG I     A  +  +M++ G  
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV---AMNLRNEMLQQGCA 442

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+NT++ G CK + +  A K+F EM    +     T   LI+G C  G L  A+ L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M    ++ +VVT N L++GF K   ++ A+ ++ D+  + + P+ I+Y+ L++A C 
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G + +AF + + M+ + + P V   N +I G  R GN     + + ++++ G     ++
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGL 494
           YN L+    ++    KA  L+    KME+E+    P++ TYN ++ GFC++ ++++A  +
Sbjct: 623 YNTLIYGFVREENMSKAFGLVK---KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679

Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           L +++E+G+ P+++TY                  + +EM+++GF PD
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 192/384 (50%), Gaps = 23/384 (5%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR----RIEL--NLDS-----------F 189
            K + LS + ++  LV+ G+  D +     M RR    R+E+  +LDS           F
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + ++    +A KL +A +    ++S G +  +   N LI    +   IG +  A  V+++
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR---IGWVELAWGVYQE 225

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +  +G+  N  T N +++  CKD  +        ++   G+   +VTYN+LI+     G 
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           ++EA  L + M   G  P V T N +ING CK    E+A+ +F ++   GLSP   TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+   CK+G + +   + + M  R V+PD+  ++ +++  +R GN++      N +   G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    V Y IL+   C+ G    A++L +EM    ++    ++VTYN ++ G C++  L 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEML---QQGCAMDVVTYNTILHGLCKRKMLG 462

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
           +A+ L NE+ E+ L P+  T  I+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTIL 486



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 144/283 (50%), Gaps = 11/283 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + LH   K         +F+ ++    +L  +S  + +L+  + K        E F++  
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMT--ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +  ++  V++ N LL    K G  +  + ++ +M  + I     S++ ++N LC  G L 
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M S  + P V+  N +I GYC+ G        ++  + M+  G +P+ +++N
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS---DGESFLEKMISEGFVPDCISYN 624

Query: 264 TLIDGFCKDENISAAM----KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           TLI GF ++EN+S A     K+ EE G  G+   V TYNS+++G C   ++ EA  +  +
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQG--GLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           M+  G+ P+  T   +INGF  +  + +A  + D++ ++G SP
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 3/193 (1%)

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI  + + + + +A   F  +  +G + S+   N LI +  + G +E A+ +   +   G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  +V T N ++  L ++G +E V   ++++   G+   +VTYN L+ A    G  ++A 
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L++    M  +   P + TYN +I G C+ GK E A  +  E+L  GL P+ TTY+ + 
Sbjct: 291 ELMN---AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 515 EEMMEKGFIPDIE 527
            E  +KG + + E
Sbjct: 348 MEACKKGDVVETE 360


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G +  +++ N ++  + + G       + ++M+ R ++ ++ +++ +++ LC+ G
Sbjct: 183 RMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A  + ++M++ G+   VVTYN L+ G CK G   K      + KDMV   I+PN +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVI 299

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN L+D F K+  +  A ++++EM + GI+  ++TYN+L++G C+  +L EA  + D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           + +   P++VT  +LI G+C  K V+    +F +IS++GL  + +TY+ L+  +C+ G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +   M+  GVLPDV TY  L+ GL   G +E    I  +L  + M  G+V Y  +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK GK + A +L      +  +   PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 480 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  +    +  G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDG 557



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 200/355 (56%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLCR+  I                    FK     G+KSSV++ N L+R L K G
Sbjct: 232 STIIDSLCRDGCI--------------DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K+ D   + K+M  R I  N+ +FN +L+   K GKL +A+++ ++M + G+SP ++TYN
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC +    ++ +A+ +   MV N   P+ VTF +LI G+C  + +   MKVF  +
Sbjct: 338 TLMDGYCMQN---RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+ A  VTY+ L+ G C  GK+  A  L  EM++ G+ P+V+T   L++G C    +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +F+D+ +  +   ++ Y T+I+  CK G++EDA+ +  S+  +GV P+V TY  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+GL ++G++     ++ ++  +G      TYN L+ A  +DG    +  L++EM
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 218/384 (56%), Gaps = 14/384 (3%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F+  ++  +  +K+ V + + ++ +L ++G  +    ++KEM+ + I+ ++ ++N ++
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
            GLCKAGK N  + +++DM S  + P V+T+N+L+D + K+   GK+ +A+ ++K+M+  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE---GKLQEANELYKEMITR 327

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI PN +T+NTL+DG+C    +S A  + + M  +  +  +VT+ SLI G C+  ++D+ 
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +   +   GL  N VT + L+ GFC+   ++ A  LF ++   G+ P V+TY  L+D 
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447

Query: 374 YCKEGRMEDAFA----MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            C  G++E A      ++ S +D G++     Y  +I G+ + G VE   N+   L   G
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  ++TY +++  LCK G   +A  LL    KME++   PN  TYN LI+   + G L 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
            +  L+ E+   G   + ++ ++V
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMV 584



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           ++   A+ +  +F  V    K+++   I  N+ + N ++N  C+  K   A  ++  +  
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           LG  P   T+N LI+G C +G   K+ KA  +   MVENG  P+ VT+N++++G C+  +
Sbjct: 152 LGYEPDTTTFNTLINGLCLEG---KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            S A  +  +M    + A V TY+++I+ LC DG +D A++L  EM   G+K +VVT N+
Sbjct: 209 TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+ G CK        +L  D+  + + P+VIT+N L+D + KEG++++A  +   M+ RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + P++ TYN L+ G   +  +    N+++ +V N     +VT+  L+   C   +    +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            +      + K     N VTY++L++GFCQ GK++ A  L  E++  G++P+  TY I+ 
Sbjct: 389 KVFRN---ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 515 EEMMEKG 521
           + + + G
Sbjct: 446 DGLCDNG 452



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 178/340 (52%), Gaps = 11/340 (3%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC---- 232
           M +R I  NL +F  V   L K G L   +D++  + S   S +    +I     C    
Sbjct: 2   MIQRSITTNLKAFRMVQPHLLKTGTLR--TDLLCTISSFLSSCERDFSSITNGNVCFRER 59

Query: 233 KKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            + GI  + K DA+  F++M+ +  LP  V F+       + +  +  +   +++  +GI
Sbjct: 60  LRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A  + T N +IN  C   K   A ++  ++M  G +P+  T N LING C +  V KA V
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVV 179

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D + E G  P ++TYN++++  C+ G    AF M   M +R V  DV TY+ +I  L 
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R+G ++   ++  E+   G+++ +VTYN LV  LCK GK      LL +M   E     P
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVP 296

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N++T+NVL+  F ++GKL++AN L  E++ +G+ PN  TY
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/411 (34%), Positives = 217/411 (52%), Gaps = 52/411 (12%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  +YGL  SV SCN  +  L ++                     LD     L G   
Sbjct: 169 FDKMLNYGLLISVDSCNLFISHLSED---------------------LDGIKIALKG--- 204

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
                    ++E+M+  G+ P   TYN +I   CK    GK+ +A+ V ++M+  GI P+
Sbjct: 205 ----EWVLKLIEEMQIKGLKPNPYTYNGVILLLCK---TGKVAEAERVLREMISEGIAPD 257

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V + TLIDGFCK  N+S+A ++F+EM    I+   +TY ++I GLC  G++ EA  L  
Sbjct: 258 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 317

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+   L+P+ VT  ALI+G+CK+  +++A  L + + + GL+P+++TY  L D  CK G
Sbjct: 318 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 377

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ++ A  + + M  +G+  ++ TYN L+ GL + GN++    +M ++   G     VTY 
Sbjct: 378 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 437

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+ A CK  +  +A  LL +M   E +   P +VT+NVL+ GFC  G LED   LL  +
Sbjct: 438 TLMDAYCKSREMVRAHELLRQMLDRELQ---PTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494

Query: 499 LEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNI 533
           LEKG++PN TTY  + ++                M  KG +PD  G+ YNI
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD--GNTYNI 543



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 193/360 (53%), Gaps = 14/360 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K G       ++ EM++R+I  +  ++  V+ GLC+ G++ +A  +  +M    
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P  VTY  LIDGYCK+G   KM +A ++   M++ G+ PN VT+  L DG CK   + 
Sbjct: 324 LEPDEVTYTALIDGYCKEG---KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++  EM   G+   + TYNSL+NGLC  G +D+AV L  +M  +G  P+ VT   L+
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + +CK + + +A  L   + ++ L P+V+T+N L++ +C  G +ED   +   ML++G++
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN LI       N+     I   +   G+     TYNIL+   CK    K+A  L
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560

Query: 457 LDEM----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
             +M    F +        + +YN LIKGF ++ K  +A  L  ++  +GL+ ++  Y I
Sbjct: 561 HRDMVGKGFNL-------TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 204/422 (48%), Gaps = 8/422 (1%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           +  K GK      +   +   S+ +  + +I   L+  + K       +  F       +
Sbjct: 232 LLCKTGKVAEAERVLREM--ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI 289

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
               ++   ++  L + G+  + + ++ EM  +R+E +  ++  +++G CK GK+ +A  
Sbjct: 290 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 349

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +   M  +G++P +VTY  L DG CK G +     A+ +  +M   G+  N  T+N+L++
Sbjct: 350 LHNQMLQMGLTPNIVTYTALADGLCKCGEVD---TANELLHEMCRKGLELNIYTYNSLVN 406

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK  NI  A+K+ ++M   G     VTY +L++  C   ++  A  L  +M+   L+P
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            VVT N L+NGFC   ++E    L   + E+G+ P+  TYN+LI  YC    M     + 
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +GV+PD +TYN LI G  +  N++    +  ++V  G    + +YN L+    K 
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            K  +A  L ++   M +E    +   YN+       +GK+E    L +E +EK L+ + 
Sbjct: 587 KKFLEARELFEQ---MRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDI 643

Query: 508 TT 509
            T
Sbjct: 644 QT 645



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 167/348 (47%), Gaps = 5/348 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           + G+      +FH +  C   L  + +    L+  Y K  K    F    +    GL  +
Sbjct: 305 QTGRVMEADKLFHEM-VCK-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 362

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++   L   L K G+ +    +  EM R+ +ELN+ ++N ++NGLCKAG +++A  +M+
Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           DM+  G  P  VTY  L+D YCK     +M +A  + + M++  + P  VTFN L++GFC
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSR---EMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 479

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +    K+ + M   GI     TYNSLI   C+   +     +   M A G+ P+  
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI G CK + +++A  L  D+  +G + +V +YN LI  + K  +  +A  +   M
Sbjct: 540 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
              G++ D   YN        EG +E    + +E +   +   + T N
Sbjct: 600 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 264/590 (44%), Gaps = 71/590 (12%)

Query: 9   IEDITELIRNHHWSKLKNTDPNTVIL------------QLFNSDADPVLILRYFCWSTKE 56
           I  + ++I+   W+     DP  V+L             L     DP L L++F W+  +
Sbjct: 102 IGSLRKIIQQDLWN-----DPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQ 156

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFT---SVSTIFHALSTCSDSLC 113
           +   H+      ++H +  A+ Y      +   + N +      V  IF  L +  +   
Sbjct: 157 VGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICV 216

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
             S + D+L   +V+        E F R  ++       SCN LL  L K G  + V   
Sbjct: 217 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 276

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + +M    I  ++ ++N +++ LCK G L  +  +   M+ +G+SP VVTYN LIDGY K
Sbjct: 277 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336

Query: 234 KGGI--------------------------------GKMYKADAVFKDMVENGILPNEVT 261
            G +                                 KM +A   F +M  NG+ PN VT
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 396

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           ++TLID FCK+  +  A+K+F +M   G+     TY SLI+  C  G L EA  L ++M+
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G+K N+VT  AL++G CK   + +A  +F  + + G+SP+   Y  L+  Y K  RME
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M +  + PD+  Y  +I G   +  +E  + I+ E+ + G+ A  V    ++
Sbjct: 517 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 576

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            A  K GKS  A++   EM  +  E     IVTY VLI G C+ G +E A      +L  
Sbjct: 577 DAYFKAGKSSDALNFFQEMQDVGVE---ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSL 633

Query: 502 GLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
           GL PN   Y                + + +EM  +G  PDI      I G
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 226/439 (51%), Gaps = 10/439 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G    V+++F+ +    D  C   II  + L+  Y K  K    FE F   
Sbjct: 329 SLIDGYGKVGSLEEVASLFNEMK---DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 385

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + GLK +V++ + L+ A  KEG  +    ++ +M+R  +  N  ++  +++  CKAG L
Sbjct: 386 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNL 445

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  ++ DM   GV   +VTY  L+DG CK G   +M +A+ VF+ M+++GI PN+  +
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG---RMIEAEEVFRSMLKDGISPNQQVY 502

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L+ G+ K E +  AMK+ ++M    I   ++ Y S+I G C   KL+E   + +EM +
Sbjct: 503 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 562

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+  N V S  +I+ + K      A   F ++ + G+  +++TY  LID  CK G +E 
Sbjct: 563 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVEL 622

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      ML  G+ P+V+ Y  LI GL +   +E  + + +E+   GM   +  +  L+ 
Sbjct: 623 AVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID 682

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G  ++A+ L+  M ++  E    ++  Y  L+ GF Q G+L  A    NE++EKG
Sbjct: 683 GNLKHGNLQEALVLISRMTELAIEF---DLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739

Query: 503 LIPNQTTYQIVREEMMEKG 521
           ++P +     +  E  ++G
Sbjct: 740 ILPEEVLCICLLREYYKRG 758



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 173/330 (52%), Gaps = 6/330 (1%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA+K   D    G+K ++++   LL  L K G+  + E V++ M +  I  N   +  ++
Sbjct: 447 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 506

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G  KA ++  A  I++ M    + P ++ Y  +I G+C +    K+ +   + ++M   
Sbjct: 507 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR---KLEETKLILEEMKSR 563

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI  N V   T+ID + K    S A+  F+EM   G+ A +VTY  LI+GLC  G ++ A
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA 623

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           V     M++ GL+PNV    +LI+G CK   +E A+ LFD++  +G++P +  +  LID 
Sbjct: 624 VDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             K G +++A  + + M +  +  D+  Y  L++G S+ G +   R   NE++  G+   
Sbjct: 684 NLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            V    L+    K G+  +A+ L +EM +M
Sbjct: 744 EVLCICLLREYYKRGQLDEAIELKNEMERM 773



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 156/311 (50%), Gaps = 5/311 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G+      +F   S   D +  N  +   L+  Y+K  +     +  K+  +  +K  
Sbjct: 476 KAGRMIEAEEVFR--SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++    ++     + K E+ + + +EMK R I  N      +++   KAGK + A +  +
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 593

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M+ +GV   +VTY +LIDG CK G +     A   F  M+  G+ PN   + +LIDG C
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLCKAGIVEL---AVDYFCRMLSLGLQPNVAVYTSLIDGLC 650

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+  I +A K+F+EM   G+   +  + +LI+G    G L EA+ L   M    ++ ++ 
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
              +L++GF +   + +AR  F+++ E+G+ P  +    L+  Y K G++++A  ++N M
Sbjct: 711 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770

Query: 391 LDRGVLPDVST 401
              G++ + +T
Sbjct: 771 ERMGLITESAT 781



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 7/300 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+     G+  +      L+   +K  + ED   + K+M    I+ +L  +  ++ G 
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C   KL +   I+E+MKS G+S   V    +ID Y K G   K   A   F++M + G+ 
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG---KSSDALNFFQEMQDVGVE 601

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
              VT+  LIDG CK   +  A+  F  M S G+   V  Y SLI+GLC +  ++ A  L
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM   G+ P++    ALI+G  K   +++A VL   ++E  +   +  Y +L+  + +
Sbjct: 662 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 721

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +  A    N M+++G+LP+     CL+    + G ++    + NE+     R GL+T
Sbjct: 722 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM----ERMGLIT 777


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/427 (33%), Positives = 222/427 (51%), Gaps = 50/427 (11%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDV---EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           LK ++L+ N L++ALV+      V   + ++ ++ +  +E+N ++FN ++ G C   KL+
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++  MK     P  V+YN ++D  CKKG   K+ +A  +  DM  NG+ PN  TFN
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKG---KLNEARDLLLDMKNNGLFPNRNTFN 122

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+ G+CK   +  A +V + M  + +   V TY +LI GLC DGK+DEA  LRDEM   
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENL 182

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L P+VVT N LING  +     K   L D++  +G+ P+ +TYN ++  Y KEG+M++A
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 242

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M + G  PD  T+N L  G  + G +     +M+E+   G++   VT N ++  
Sbjct: 243 GNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 302

Query: 444 LCKDGKSKKAVSLL----------DEM---------FKMEKEKKW---------PNIVTY 475
           LC + K   A  LL          DE+         FK+ K   W         P+I+TY
Sbjct: 303 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITY 362

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMME 519
             +I G C+ GK + +    NELLE GL+P+QTTY  +                R +M++
Sbjct: 363 GTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVK 422

Query: 520 KGFIPDI 526
           K F PD+
Sbjct: 423 KSFKPDL 429



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 209/383 (54%), Gaps = 10/383 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+  L K+GK ++   +  EM+  ++  ++ ++N ++NG  +     K  ++++
Sbjct: 153 VRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELID 212

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M+  GV P  VTYN+++  Y K+G   KM  A    + M E+G  P+ VTFNTL +G+C
Sbjct: 213 EMEGKGVKPNAVTYNVVVKWYVKEG---KMDNAGNELRKMEESGFSPDCVTFNTLSNGYC 269

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +S A ++ +EM   G+    VT N++++ LC + KLD+A  L       G   + V
Sbjct: 270 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 329

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +   LI G+ K   V K+   +D++ E+ + PS+ITY T+I   C+ G+ + +    N +
Sbjct: 330 SYGTLIMGYFK---VGKSXX-WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNEL 385

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L+ G++PD +TYN +I G  REG V+   +  N++V    +  L T NILV  LC +G  
Sbjct: 386 LESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGML 445

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            KA+ L         + K  + VT+N +I G C++G+ E+A  LL E+ EK L P+  T+
Sbjct: 446 DKALKLFKTWIS---KGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTH 502

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
             +   + + G + + E  M  I
Sbjct: 503 NAILSALADAGRMKEAEEFMSGI 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 203/406 (50%), Gaps = 27/406 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GFE        G+K + ++ N +++  VKEGK ++     ++M+      +  +FN + N
Sbjct: 207 GFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSN 266

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CKAG+L++A  +M++M   G+    VT N ++   C +  +   YK   +     + G
Sbjct: 267 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK---LLSSASKRG 323

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              +EV++ TLI G+ K          ++EM    I   ++TY ++I GLC  GK D+++
Sbjct: 324 YFVDEVSYGTLIMGYFK----VGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSI 379

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
              +E++ SGL P+  T N +I G+C++  V+KA    + + ++   P + T N L+   
Sbjct: 380 DKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGL 439

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C EG ++ A  +  + + +G   D  T+N +I+GL  EG  E   +++ E+    +    
Sbjct: 440 CTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDC 499

Query: 435 VTYNILVGALCKDGKSKKAVSLL----------DEMFKMEKEKKW----------PNIVT 474
            T+N ++ AL   G+ K+A   +          D+   + K K            PN V 
Sbjct: 500 YTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVA 559

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           ++  I   C +GK +DA  ++ E  +KG+I +++TY  + E ++++
Sbjct: 560 FSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 169/302 (55%), Gaps = 3/302 (0%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK L + P ++T N LI    +      +Y + A+F D+++ G+  N  TFN LI G C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +S A+ +  +M         V+YN++++ LC  GKL+EA  L  +M  +GL PN  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L++G+CK   +++A  + D ++   + P V TY TLI   CK+G++++AF +R+ M 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +  +LP V TYN LI G     +      +++E+   G++   VTYN++V    K+GK  
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A    +E+ KME+    P+ VT+N L  G+C+ G+L +A  +++E+  KGL  N  T  
Sbjct: 241 NAG---NELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLN 297

Query: 512 IV 513
            +
Sbjct: 298 TI 299


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 218/424 (51%), Gaps = 41/424 (9%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +N    L F  F R    G   + ++ + L+  L  EG+ ++   + +EM  + 
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           IE  + ++   +  LC      +A +++  MK  G  P V TY  LI G  +   +GK+ 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 397

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  ++  M++ G++PN VT+N LI+  C     S A+K+F  M  HG  A   TYN +I
Sbjct: 398 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 457

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN------------------------ 337
            GLC+ G +++A+ L ++M+  G  P VVT N LIN                        
Sbjct: 458 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517

Query: 338 -----------GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
                      GF K   +E A   F ++ E GL+P+ ++Y TLID + K+G+++ A ++
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  P+V +YN +I GLS+E        I +++   G+   ++TY  L+  LC+
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G+++ A  +  +   MEK K  PN+ TY+ LI G CQ+GK ++A  LL E+  KGL P+
Sbjct: 638 NGRTQFAFKIFHD---MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694

Query: 507 QTTY 510
           + T+
Sbjct: 695 EVTF 698



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 224/480 (46%), Gaps = 89/480 (18%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVE 171
           I +LM+   +N       E  +R  D+       G   S+ SCN LL  L K    E   
Sbjct: 172 IRILMIKACRNE------EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +YK+M    I+ +L +FN ++N L K GK+ +A  I+  +    +SP V TY  LI G+
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   +   +    VF  MV+ G  PN VT++TLI+G C +  +  A+ + EEM   GI 
Sbjct: 286 CRNRNLDLAF---GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342

Query: 292 AGVV-----------------------------------TYNSLINGLCVDGKLDEAVAL 316
             V                                    TY +LI+GL   GKL+ A+ L
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 402

Query: 317 RDEMMASGLKPNVVTSNALIN-----------------------------------GFCK 341
             +M+  GL PN VT NALIN                                   G C 
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +EKA VLF+ + + G  P+V+TYNTLI+ Y  +G + +A  + + M + G  PD  T
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L++G S+ G +E       E+V  G+    V+Y  L+    KDGK   A+SLL+   
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE--- 579

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +ME+    PN+ +YN +I G  ++ +  +A  + +++ E+GL+PN  TY  + + +   G
Sbjct: 580 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG 639



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 139/423 (32%), Positives = 207/423 (48%), Gaps = 48/423 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+  L   G+F     ++  M+      N  ++N ++ GLC  G + KA
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M  +G  P VVTYN LI+GY  KG +     A  +   M ENG  P+E T+N L
Sbjct: 470 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN---AARLLDLMKENGCEPDEWTYNEL 526

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GF K   + +A   F+EM   G+    V+Y +LI+G   DGK+D A++L + M   G 
Sbjct: 527 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV + NA+ING  K+    +A  + D ++EQGL P+VITY TLID  C+ GR + AF 
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  R  LP++ TY+ LI GL +EG  +    ++ E+   G+    VT+  L+    
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL----------------- 488
             G+   A  LL  M  +  +   PN  TY+VL+KG  ++  L                 
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCK---PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSP 763

Query: 489 -------EDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIP 524
                  E  + LL  + E G  P   TY                 Q+V+ +M E+GF P
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK-DMKERGFCP 822

Query: 525 DIE 527
           D E
Sbjct: 823 DRE 825



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 200/408 (49%), Gaps = 32/408 (7%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   + GL  + +S   L+    K+GK +    + + M+      N++S+N V+NGL K
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             + ++A  I + M   G+ P V+TY  LIDG C+ G     +K   +F DM +   LPN
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK---IFHDMEKRKCLPN 659

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+++LI G C++     A  + +EM   G+A   VT+ SLI+G  V G++D A  L  
Sbjct: 660 LYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 719

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARV------------------------LFDD 354
            M+  G KPN  T + L+ G  K+ L+ + +V                        L   
Sbjct: 720 RMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLAR 779

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +SE G  P++ TY+TL+   C++GR  +A  +   M +RG  PD   Y  L+    +   
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIV 473
           V+    I + +   G +  L  Y  L+ ALCK G+ ++A +L D M     EK+W  + +
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML----EKEWNADEI 895

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            + VL+ G  ++G+L+    LL+ +  K   PN  TY I+  E+   G
Sbjct: 896 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 191/431 (44%), Gaps = 64/431 (14%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K GK  S S  F  +  C   L  N +    L+  + K+ K  +     +R  + G  
Sbjct: 530 FSKWGKLESASFYFQEMVECG--LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYV----------------------------------- 173
            +V S N ++  L KE +F + E +                                   
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + +M++R+   NL +++ ++ GLC+ GK ++A  ++++M+  G++P  VT+  LIDG+  
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF---C-------------------- 270
              +G++  A  + + MV+ G  PN  T++ L+ G    C                    
Sbjct: 708 ---LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPH 764

Query: 271 -KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            KD N      +   M   G    + TY++L++GLC  G+  EA  L  +M   G  P+ 
Sbjct: 765 EKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 824

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
               +L+   CK   V+ A  +F  I  +G    +  Y  LI A CK G++E+A A+ ++
Sbjct: 825 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 884

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML++    D   +  L+ GL +EG ++    +++ + +      + TY IL   L + GK
Sbjct: 885 MLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944

Query: 450 SKKAVSLLDEM 460
           S ++  L D++
Sbjct: 945 SIESEPLADKL 955


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 240/510 (47%), Gaps = 70/510 (13%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           LF+ D DP   L +  W ++  R  HS+                    S L + + NG  
Sbjct: 96  LFSLDLDPKTALNFSHWISQNPRYKHSVY----------------SYASLLTLLINNGYV 139

Query: 96  TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC- 154
             V  I   +    DS+     ++D+      + M     FE       Y L   ++ C 
Sbjct: 140 GVVFKIRLLMIKSCDSVGDALYVLDL-----CRKMNKDERFEL-----KYKL---IIGCY 186

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL +L + G  ++++ VY EM   ++  N+ ++N ++NG CK G + +A+  +  +  
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P   TY  LI GYC++  +   +K   VF +M   G   NEV +  LI G C    
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFK---VFNEMPLKGCRRNEVAYTHLIHGLCVARR 303

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  AM +F +M        V TY  LI  LC   +  EA+ L  EM  +G+KPN+ T   
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED------------ 382
           LI+  C +   EKAR L   + E+GL P+VITYN LI+ YCK G +ED            
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 383 ----------------------AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
                                 A  + N ML+R VLPDV TYN LI G  R GN +    
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +++ + + G+     TY  ++ +LCK  + ++A  L D    +E++   PN+V Y  LI 
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGVNPNVVMYTALID 540

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G+C+ GK+++A+ +L ++L K  +PN  T+
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 236/455 (51%), Gaps = 25/455 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
            L+H L VA++   I   + +FVK        T+    +    SLC +    + L L  V
Sbjct: 293 HLIHGLCVARR---IDEAMDLFVKMKDDECFPTV-RTYTVLIKSLCGSERKSEALNL--V 346

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K M+            + G+K ++ +   L+ +L  + KFE    +  +M  + +  N+ 
Sbjct: 347 KEME------------ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++NG CK G +  A D++E M+S  +SP   TYN LI GYCK      ++KA  V 
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK----SNVHKAMGVL 450

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M+E  +LP+ VT+N+LIDG C+  N  +A ++   M   G+     TY S+I+ LC  
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +++EA  L D +   G+ PNVV   ALI+G+CK   V++A ++ + +  +   P+ +T+
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI   C +G++++A  +   M+  G+ P VST   LI  L ++G+ +   +   ++++
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G +    TY   +   C++G+   A    D M KM +    P++ TY+ LIKG+   G+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAE---DMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
              A  +L  + + G  P+Q T+  + + ++E  +
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 212/409 (51%), Gaps = 7/409 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L++ Y +       F+ F      G + + ++   L+  L    + ++   ++ +MK   
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               + ++  ++  LC + + ++A +++++M+  G+ P + TY +LID  C +    K  
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC---KFE 375

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA  +   M+E G++PN +T+N LI+G+CK   I  A+ V E M S  ++    TYN LI
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C    + +A+ + ++M+   + P+VVT N+LI+G C+    + A  L   ++++GL 
Sbjct: 436 KGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY ++ID+ CK  R+E+A  + +S+  +GV P+V  Y  LI G  + G V+    +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + ++++       +T+N L+  LC DGK K+A +LL+E  KM K    P + T  +LI  
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEE--KMVKIGLQPTVSTDTILIHR 611

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
             + G  + A     ++L  G  P+  TY    +    +G + D E  M
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 228/529 (43%), Gaps = 84/529 (15%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLA 125
           L+ SL    K+ K R  L   ++ G   +V T ++AL    +  C+  +I   +D++ L 
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVIT-YNALI---NGYCKRGMIEDAVDVVELM 419

Query: 126 YVKNMKP-----------------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
             + + P                 H       +  +  +   V++ N L+    + G F+
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M  R +  +  ++  +++ LCK+ ++ +A D+ + ++  GV+P VV Y  LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK G   K+ +A  + + M+    LPN +TFN LI G C D  +  A  + E+M   
Sbjct: 540 DGYCKAG---KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V T   LI+ L  DG  D A +   +M++SG KP+  T    I  +C++  +  A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF------------------------ 384
             +   + E G+SP + TY++LI  Y   G+   AF                        
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716

Query: 385 -----------------AMRN------------SMLDRGVLPDVSTYNCLIAGLSREGNV 415
                            AM N             M++  V P+  +Y  LI G+   GN+
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776

Query: 416 EGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                + + +  N G+    + +N L+   CK  K  +A  ++D+M  +      P + +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV---GHLPQLES 833

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             VLI G  +KG+ E    +   LL+ G   ++  ++I+ + + ++G +
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 22/315 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ +V +   L+  L+K+G F+     +++M     + +  ++   +   C+ G+L  A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+M  M+  GVSP + TY+ LI GY   G +G+   A  V K M + G  P++ TF +L
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713

Query: 266 IDGF---------------CKDENI---SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           I                  C   N+      +++ E+M  H +     +Y  LI G+C  
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773

Query: 308 GKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           G L  A  + D M  + G+ P+ +  NAL++  CK K   +A  + DD+   G  P + +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
              LI    K+G  E   ++  ++L  G   D   +  +I G+ ++G VE    + N + 
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893

Query: 427 NNGMRAGLVTYNILV 441
            NG +    TY++L+
Sbjct: 894 KNGCKFSSQTYSLLI 908



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 159/350 (45%), Gaps = 27/350 (7%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+ N L+  L  +GK ++   + ++M +  ++  + +   +++ L K G  + A    + 
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S G  P   TY   I  YC++G   ++  A+ +   M ENG+ P+  T+++LI G+  
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREG---RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGL---------------CVDG---KLDEA 313
               + A  V + M   G      T+ SLI  L               C      + D  
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPSVITYNTLID 372
           V L ++M+   + PN  +   LI G C+   +  A  +FD +   +G+SPS + +N L+ 
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK  +  +A  + + M+  G LP + +   LI GL ++G  E   ++   L+  G   
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKG 481
             + + I++  + K G     V    E+F  MEK     +  TY++LI+G
Sbjct: 865 DELAWKIIIDGVGKQG----LVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 19/226 (8%)

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           +DE      K  +   N L+N   +  LV++ + ++ ++ E  + P++ TYN +++ YCK
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +E+A    + +++ G+ PD  TY  LI G  +  +++    + NE+   G R   V 
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+  LC   +  +A+ L     KM+ ++ +P + TY VLIK  C   +  +A  L+ 
Sbjct: 291 YTHLIHGLCVARRIDEAMDLF---VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 497 ELLEKGLIPNQTTYQIV-------------RE---EMMEKGFIPDI 526
           E+ E G+ PN  TY ++             RE   +M+EKG +P++
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 16/290 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F++    G K    +    ++   +EG+  D E +  +M+   +  +L +++ ++ 
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG-----YCKKGG-------IGKMYK 242
           G    G+ N A D+++ M+  G  P   T+  LI       Y K+ G       +  M +
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740

Query: 243 ADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVTYN 298
            D V    + MVE+ + PN  ++  LI G C+  N+  A KVF+ M  + GI+   + +N
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++  C   K +EA  + D+M+  G  P + +   LI G  KK   E+   +F ++ + 
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           G     + +  +ID   K+G +E  + + N M   G      TY+ LI G
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 206/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    + K+M++ +IE  +  +N +++ LC    +N A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+ P VVTYN LI   C     G+   A  +  DM+E  I PN VTF+ L
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCN---YGRWSDASRLLSDMIERKINPNVVTFSAL 332

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N LI GFCK K V++   LF ++S++GL  + +TY TLI  + +    ++A  
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GVLPD+ TY+ L+ GL   G VE    +   L  + M   + TYNI++  +C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +      D    +  +   PN+VTY  ++ GFC+KG  E+A+ L  E+ E+G +P
Sbjct: 513 KAGKVEDG---WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569

Query: 506 NQTTYQIVREEMMEKG 521
           +  TY  +    +  G
Sbjct: 570 DSGTYNTLIRAHLRDG 585



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 211/394 (53%), Gaps = 24/394 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  KF+ V  + ++M+   I  NL +++ ++N  C+  +L+ A  ++
Sbjct: 80  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT N L++G+C    I     A ++   MVE G  P+  TFNTLI G 
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRIS---DAVSLVGQMVEMGYQPDSFTFNTLIHGL 196

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +    S A+ + + M   G    +VTY  ++NGLC  G +D A++L  +M    ++P V
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+  C  K V  A  LF ++  +G+ P+V+TYN+LI   C  GR  DA  + + 
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++R + P+V T++ LI    +EG +     + +E++   +   + TY+ L+   C   +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376

Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A      MF++   K  +PN+VTYN LIKGFC+  ++++   L  E+ ++GL+ N  
Sbjct: 377 LDEA----KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 509 TY----------------QIVREEMMEKGFIPDI 526
           TY                QIV ++M+  G +PDI
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 243/494 (49%), Gaps = 50/494 (10%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L    K  KF  V ++   +     S +L   SI+I+   
Sbjct: 68  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN--- 124

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +  L      +    G +  +++ N LL       +  D   +  +M     +
Sbjct: 125 -CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  +FN +++GL +  + ++A  +++ M   G  P +VTY I+++G CK+G I     A
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID---LA 240

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
            ++ K M +  I P  V +NT+ID  C  +N++ A+ +F EM + GI   VVTYNSLI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 304 LC-----------------------------------VDGKLDEAVALRDEMMASGLKPN 328
           LC                                    +GKL EA  L DEM+   + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           + T ++LINGFC    +++A+ +F+ +  +   P+V+TYNTLI  +CK  R+++   +  
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  RG++ +  TY  LI G  +    +  + +  ++V++G+   ++TY+IL+  LC +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K + A+ + +    +++ K  P+I TYN++I+G C+ GK+ED   L   L  KG+ PN  
Sbjct: 481 KVETALVVFE---YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 509 TYQIVREEMMEKGF 522
           TY  +      KG 
Sbjct: 538 TYTTMMSGFCRKGL 551



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 177/322 (54%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ +V++ N L+R L   G++ D   +  +M  R+I  N+ +F+ +++   K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P + TY+ LI+G+C      ++ +A  +F+ M+     PN
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 395

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+NTLI GFCK + +   M++F EM   G+    VTY +LI+G     + D A  +  
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M++ G+ P+++T + L++G C    VE A V+F+ +    + P + TYN +I+  CK G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  S+  +GV P+V TY  +++G  R+G  E    +  E+   G      TYN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG    +  L+ EM
Sbjct: 576 TLIRAHLRDGDKAASAELIREM 597



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 33/302 (10%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCK----------------KGGIGKMY--------- 241
            + E M S    P VVTYN LI G+CK                +G +G            
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441

Query: 242 -------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                   A  VFK MV +G+LP+ +T++ L+DG C +  +  A+ VFE +    +   +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN +I G+C  GK+++   L   +   G+KPNVVT   +++GFC+K L E+A  LF +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G  P   TYNTLI A+ ++G    +  +   M     + D ST   L+  +  +G 
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGR 620

Query: 415 VE 416
           ++
Sbjct: 621 LD 622



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 3/239 (1%)

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D  +  A+ +F +M        +V ++ L++ +    K D  ++L ++M   G+  N+ T
Sbjct: 59  DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LIN FC++  +  A  +   + + G  P ++T N+L++ +C   R+ DA ++   M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           + G  PD  T+N LI GL R         +++ +V  G +  LVTY I+V  LCK G   
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            A+SLL    KME+ K  P +V YN +I   C    + DA  L  E+  KG+ PN  TY
Sbjct: 239 LALSLLK---KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 219/441 (49%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+     L+L + +N    L F  F R    G   + ++ + L+  L  EG+ E+   + 
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM ++ IE  + ++   L  LC AG  ++A +++  MK  G  P + T+  LI G  + 
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G                                  G+   A  +FK M+ +G LP+  T+
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N +I  FC   +I  AM +F++M   G +  V+TYN+LI G C  G L+ A+ L + M  
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +GLKP+  T   LI+GF +   +E A  LF  + E G+SP+ +TY  +ID Y    +++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A A+   M++ G LP   TYN +I+G S+  ++    N   ++V  G+   ++TY   + 
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN--GLLNELLE 500
            LC++G++  A  +  E   MEK   +PN+ TY+ LI G CQ+G+ EDA    LL  L  
Sbjct: 596 GLCRNGRTGLAFKIFHE---MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  + + +  +G
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEG 673



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/396 (34%), Positives = 199/396 (50%), Gaps = 25/396 (6%)

Query: 161 LVKEGKFEDVEY---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           L++ GKF+ V+    +Y +M    I  +L +FN ++N LCK G++ +A  IM  +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P   TY  LI G+C+   +   +   A+F  MV++G  PN VT++TLI+G C +  +  
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAF---AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE 290

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           AM + EEM   GI   V TY   +  LC  G   EAV L  +M   G  PN+ T  ALI+
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  +    E A  L+  +   GL P+ +TYN LI+  C EGR E AF +   ML  G LP
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
              TYN +I      G+++    I ++++  G    ++TYN L+   CK G    A+ LL
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-- 515
            E+ K    K  P+  TY  LI GF + GKLE A  L   ++E G+ PN  TY  + +  
Sbjct: 471 -EIMKGNGLK--PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 516 --------------EMMEKGFIPDIEGHMYNISGTS 537
                         +M+E G +P  + +   ISG S
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 260/555 (46%), Gaps = 55/555 (9%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNTV---ILQLFNSDADPVLILRYFCWSTKEL 57
           PF    S I  I    +  H S+L +  P      ++ +  +  +   +LR+F W ++  
Sbjct: 46  PFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRK 105

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKN----GKFTSVSTIFHALSTCSD--- 110
              H +     +L+ LV  + +        + +K+    G+   V+     +++  D   
Sbjct: 106 FFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY 165

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           +LC        L++   K     L  + + +  + G++ S+L+ N ++  L K+G+ ++ 
Sbjct: 166 TLCS----FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           + +   + R     N  ++  ++ G C+   L+ A  + + M   G  P  VTY+ LI+G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 231 YCKKGGIGKMYKADAVFKDMVENGI----------------------------------- 255
            C +   G++ +A  + ++MV+ GI                                   
Sbjct: 282 LCSE---GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +PN  TF  LI G  +D     A+ ++ +M + G+    VTYN+LIN LCV+G+ + A  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   M++ G  P+  T N +I  FC    ++KA V+FD + + G SP+VITYNTLI  YC
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+G + +A  +   M   G+ PD  TY  LI+G SR G +E   ++   ++ +G+    V
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  ++       K   A++L    +KM +    P+  TYNV+I GF +   + +A    
Sbjct: 519 TYTAIIDGYFNLAKVDDALALF---WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 496 NELLEKGLIPNQTTY 510
            +++++GL+PN  TY
Sbjct: 576 GKMVKQGLLPNVITY 590



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 196/384 (51%), Gaps = 8/384 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+  L  EG+FE    ++K M       +  ++N ++   C  G + KA
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I + M   G SP V+TYN LI GYCK+G +    +   + K    NG+ P+  T+  L
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG---NGLKPDAWTYTEL 488

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF +   +  A  +F  M  HGI+   VTY ++I+G     K+D+A+AL  +M+ SG 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T N +I+GF K   + +A      + +QGL P+VITY + ID  C+ GR   AF 
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR--NIMNELVNNGMRAGLVTYNILVGA 443
           + + M  R   P++ TY+ LI GL +EG  E     N++  L + G    + TY  LV  
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC +G+  +A  L+     M+K+   P+   Y  L+ G C+  K+E A  +   +   G 
Sbjct: 669 LCGEGRCYEADQLV---VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 504 IPNQTTYQIVREEMMEKGFIPDIE 527
             + + Y+ +   + ++ FI + +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQ 749



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 217/447 (48%), Gaps = 13/447 (2%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P I++F  +     ++GKF     ++H +   +D L   ++  + L+       +    F
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             FK    +G   S  + N++++     G  +    ++ +M +     N+ ++N ++ G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G LN A  ++E MK  G+ P   TY  LI G+ +    GK+  A ++F  M+E+GI 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG---GKLEHATSLFYGMMEHGIS 514

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+  +IDG+     +  A+ +F +M   G      TYN +I+G      + EA   
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M+  GL PNV+T  + I+G C+      A  +F ++ ++   P++ TY++LI   C+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 377 EGRMEDA--FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           EGR EDA  + +   +   G  P+V TY  L+ GL  EG       ++  +   G++   
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y  L+   CK+ K + A+++    + M+      ++  Y  LI   C++  +E+A  +
Sbjct: 695 EIYRALLIGECKNLKVESALNIF---YSMDTLGFQLHLSDYKALICALCKENFIEEAQCI 751

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKG 521
              +LEK    ++  + ++ + ++++G
Sbjct: 752 FQTMLEKHWNSDEVVWTVLLDGLLKEG 778



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 8/368 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + L+  Y K    +      +     GLK    +  +L+    + GK E    ++
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M    I  N  ++  +++G     K++ A  +   M   G  P   TYN++I G+ K 
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             I +   A+     MV+ G+LPN +T+ + IDG C++     A K+F EM        +
Sbjct: 566 NSISE---AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622

Query: 295 VTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            TY+SLI GLC +G+ ++A    L   +   G +PNV T   L+ G C +    +A  L 
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + ++GL PS   Y  L+   CK  ++E A  +  SM   G    +S Y  LI  L +E
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +E  + I   ++     +  V + +L+  L K+G++   + LL     ME      N 
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLH---VMESRNCTLNF 799

Query: 473 VTYNVLIK 480
            TY +L +
Sbjct: 800 QTYVMLAR 807



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 7/324 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F + GK    +++F+ +      +  N +    ++  Y    K       F +  + G  
Sbjct: 492 FSRGGKLEHATSLFYGMM--EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            S  + N ++    K     + E    +M ++ +  N+ ++   ++GLC+ G+   A  I
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYKADAVFKDMVENGILPNEVTFNTLI 266
             +M+     P + TY+ LI G C++G     +MY    +   +   G  PN  T+ TL+
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN---LLARLTHYGCEPNVDTYTTLV 666

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G C +     A ++   M   G+      Y +L+ G C + K++ A+ +   M   G +
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++    ALI   CK+  +E+A+ +F  + E+  +   + +  L+D   KEG  +    +
Sbjct: 727 LHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKL 786

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLS 410
            + M  R    +  TY  L   LS
Sbjct: 787 LHVMESRNCTLNFQTYVMLARELS 810


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 212/377 (56%), Gaps = 10/377 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+       N L+R  V+ G+      V+ EM RR ++  + +FN +++G+C+A  L+
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLD 237

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
               + ++M  +GV P V TY  LI G+C+    G+M  A  +F +M + G+ PN V F 
Sbjct: 238 AVDGLYKEMSDVGVKPDVYTYGALIKGFCR---TGRMENAVKMFNEMRDTGVNPNAVVFT 294

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLID  CK+ N++A M ++++M   G+   +V YN+L+NGLC    L  A ++ +EM  +
Sbjct: 295 TLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA 354

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKP+ VT   LI+G CK   ++ A  +   ++E+ +S   +TY  LI    K GR  DA
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M++  + PD +TY  +I    R+G+V+    ++ E+ N G + G+VTYN+++  
Sbjct: 415 ERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNG 474

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G+ K A  LL  M  +      P+ +TYN+L+ G C+ GK+ ++  L +    KG+
Sbjct: 475 LCKLGQMKNADMLLHAMLNIGVS---PDDITYNILLDGQCKHGKVANSEELES---SKGM 528

Query: 504 IPNQTTYQIVREEMMEK 520
           +P+   Y  +  E+ +K
Sbjct: 529 VPDFAVYTSLISELAKK 545



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 195/359 (54%), Gaps = 20/359 (5%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++    + G+L  A  + ++M+   V P VVT+N LI G C+   +  +   D ++K
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAV---DGLYK 244

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M + G+ P+  T+  LI GFC+   +  A+K+F EM   G+    V + +LI+  C +G
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            ++  + L  +M   G+ P++V  NAL+NG C+ + ++ A  + +++   GL P  +TY 
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CK+G+++ A  ++  M ++ V  D  TY  LI+GLS+ G       ++ E++  
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +     TY +++ A C+ G  K    LL EM   + + K P +VTYNV++ G C+ G++
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM---QNKGKKPGVVTYNVIMNGLCKLGQM 481

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV------------REEM-MEKGFIPDIEGHMYNIS 534
           ++A+ LL+ +L  G+ P+  TY I+             EE+   KG +PD   +   IS
Sbjct: 482 KNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVPDFAVYTSLIS 540



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 156/275 (56%), Gaps = 4/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +  +++ G+ P    FN L+  F +   + +A KVF+EM    +   VVT+N+LI+G+C 
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCR 232

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              LD    L  EM   G+KP+V T  ALI GFC+   +E A  +F+++ + G++P+ + 
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLIDA+CKEG +     +   M  RGV+PD+  YN L+ GL R  N++   +I+ E+ 
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           N G++   VTY  L+   CKDGK   A+ +  +M   EKE    + VTY  LI G  + G
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM--AEKEVSL-DEVTYTALISGLSKAG 409

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E++E  L P+ TTY +V +    KG
Sbjct: 410 RPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKG 444



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 16/385 (4%)

Query: 72  SLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAY 126
            L+ A   P+ R F   +  FV+ G+  S   +F  +  S     +  N++I  M     
Sbjct: 176 QLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGM---CR 232

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            +++    G   +K   D G+K  V +   L++   + G+ E+   ++ EM+   +  N 
Sbjct: 233 ARDLDAVDGL--YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNA 290

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
             F  +++  CK G +N   D+ +DM+  GV P +V YN L++G C+   +     A+++
Sbjct: 291 VVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK---AAESI 347

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            ++M   G+ P++VT+ TLIDG CKD  +  AM + ++M    ++   VTY +LI+GL  
Sbjct: 348 VEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G+  +A  +  EMM + L+P+  T   +I+ FC+K  V+    L  ++  +G  P V+T
Sbjct: 408 AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVT 467

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN +++  CK G+M++A  + ++ML+ GV PD  TYN L+ G  + G V     + +   
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES--- 524

Query: 427 NNGMRAGLVTYNILVGALCKDGKSK 451
           + GM      Y  L+  L K   +K
Sbjct: 525 SKGMVPDFAVYTSLISELAKKKPAK 549


>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
 gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/450 (32%), Positives = 229/450 (50%), Gaps = 14/450 (3%)

Query: 18  NHHWSKL----KNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
           N HW KL     +  P  +   L     D V  L+   W  K   +SH+L     LLH+L
Sbjct: 54  NSHWEKLLPLSTSLTPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTL 113

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS--IIIDMLMLAYVKNMK 131
              +++   + FL   + +       T+F AL   S  LC +S  ++ D L        K
Sbjct: 114 SKHRQFKTTQKFLTQTLSSHP---PHTLFDAL-LFSYRLCNSSSPLVFDSLFKTLAHTNK 169

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFN 190
                  +    ++G   +V SCN  L +L++  + +     Y+E++RR  +  N+ + N
Sbjct: 170 FRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLN 229

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            ++   C  G++ K  D++E M  +G+SP VV++N LI GYC KG  G   K  ++   M
Sbjct: 230 MIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSL---M 286

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           VENG+ PN VTFNTLI+GFCK+  +  A +VF EM    +   VVTYN+L+NG    G  
Sbjct: 287 VENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDS 346

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           +  V + +EMM +GLK +++T NALI G CK    +KA     ++ ++ L P+  T++ L
Sbjct: 347 EMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSAL 406

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I   C     E AF +  SM+  G  P+  T+  LI+   +  + +G   ++ +++   M
Sbjct: 407 ITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLM 466

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
              L T + L   LC+ GK++ A++L  EM
Sbjct: 467 SPDLSTMSELCDGLCRCGKNQLALALCSEM 496



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 23/345 (6%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY--CKKGG------- 236
           LD+ + +L+ L K  +       +   ++L   P    ++ L+  Y  C           
Sbjct: 103 LDTHSILLHTLSKHRQFKTTQKFLT--QTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSL 160

Query: 237 ------IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG- 289
                   K   A  ++  M E+G  P   + N  +    +      A+  + E+     
Sbjct: 161 FKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSC 220

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           ++  V T N +I   C+ G++ +   + ++MM  GL PNVV+ N LI+G+C K L   A 
Sbjct: 221 VSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL 280

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   + E G+ P+V+T+NTLI+ +CKE ++ +A  + N M    V P V TYN L+ G 
Sbjct: 281 KVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340

Query: 410 SREGNVE-GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            + G+ E GVR +  E++ NG++A ++TYN L+  LCKDGK+KKA   + E   ++KE  
Sbjct: 341 GQVGDSEMGVR-VYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRE---LDKENL 396

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            PN  T++ LI G C +   E A  +   ++  G  PN  T+Q++
Sbjct: 397 VPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQML 441



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 146/284 (51%), Gaps = 3/284 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N   ++M++ AY    +   GF+  ++  D GL  +V+S N L+     +G F     V 
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M    ++ N+ +FN ++NG CK  KL++A+ +  +MK   V P VVTYN L++GY   
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY--- 340

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +G       V+++M+ NG+  + +T+N LI G CKD     A     E+    +    
Sbjct: 341 GQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNA 400

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            T+++LI G CV    + A  +   M+ SG  PN  T   LI+ FCK +  + A  +  D
Sbjct: 401 STFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRD 460

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           +  + +SP + T + L D  C+ G+ + A A+ + M  R +LPD
Sbjct: 461 MLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/122 (18%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           ++ L   L+         +I   +  +G    + + N  + +L +  ++  A++   E+ 
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIR 216

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  +    PN+ T N++I+ +C  G+++    +L ++++ GL PN  ++  +      KG
Sbjct: 217 R--RSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKG 274

Query: 522 FI 523
             
Sbjct: 275 LF 276


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 219/441 (49%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+     L+L + +N    L F  F R    G   + ++ + L+  L  EG+ E+   + 
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM ++ IE  + ++   L  LC AG  ++A +++  MK  G  P + T+  LI G  + 
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G                                  G+   A  +FK M+ +G LP+  T+
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N +I  FC   +I  AM +F++M   G +  V+TYN+LI G C  G L+ A+ L + M  
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +GLKP+  T   LI+GF +   +E A  LF  + E G+SP+ +TY  +ID Y    +++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A A+   M++ G LP   TYN +I+G S+  ++    N   ++V  G+   ++TY   + 
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN--GLLNELLE 500
            LC++G++  A  +  E   MEK   +PN+ TY+ LI G CQ+G+ EDA    LL  L  
Sbjct: 596 GLCRNGRTGLAFKIFHE---MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY  + + +  +G
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEG 673



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/396 (34%), Positives = 199/396 (50%), Gaps = 25/396 (6%)

Query: 161 LVKEGKFEDVEY---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           L++ GKF+ V+    +Y +M    I  +L +FN ++N LCK G++ +A  IM  +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P   TY  LI G+C+   +   +   A+F  MV++G  PN VT++TLI+G C +  +  
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAF---AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE 290

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           AM + EEM   GI   V TY   +  LC  G   EAV L  +M   G  PN+ T  ALI+
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  +    E A  L+  +   GL P+ +TYN LI+  C EGR E AF +   ML  G LP
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
              TYN +I      G+++    I ++++  G    ++TYN L+   CK G    A+ LL
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-- 515
            E+ K    K  P+  TY  LI GF + GKLE A  L   ++E G+ PN  TY  + +  
Sbjct: 471 -EIMKGNGLK--PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 516 --------------EMMEKGFIPDIEGHMYNISGTS 537
                         +M+E G +P  + +   ISG S
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 260/555 (46%), Gaps = 55/555 (9%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNTV---ILQLFNSDADPVLILRYFCWSTKEL 57
           PF    S I  I    +  H S+L +  P      ++ +  +  +   +LR+F W ++  
Sbjct: 46  PFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRK 105

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKN----GKFTSVSTIFHALSTCSD--- 110
              H +     +L+ LV  + +        + +K+    G+   V+     +++  D   
Sbjct: 106 FFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY 165

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           +LC        L++   K     L  + + +  + G++ S+L+ N ++  L K+G+ ++ 
Sbjct: 166 TLCS----FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           + +   + R     N  ++  ++ G C+   L+ A  + + M   G  P  VTY+ LI+G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 231 YCKKGGIGKMYKADAVFKDMVENGI----------------------------------- 255
            C +   G++ +A  + ++MV+ GI                                   
Sbjct: 282 LCSE---GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +PN  TF  LI G  +D     A+ ++ +M + G+    VTYN+LIN LCV+G+ + A  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   M++ G  P+  T N +I  FC    ++KA V+FD + + G SP+VITYNTLI  YC
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+G + +A  +   M   G+ PD  TY  LI+G SR G +E   ++   ++ +G+    V
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  ++       K   A++L    +KM +    P+  TYNV+I GF +   + +A    
Sbjct: 519 TYTAIIDGYFNLAKVDDALALF---WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 496 NELLEKGLIPNQTTY 510
            +++++GL+PN  TY
Sbjct: 576 GKMVKQGLLPNVITY 590



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 196/384 (51%), Gaps = 8/384 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+  L  EG+FE    ++K M       +  ++N ++   C  G + KA
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I + M   G SP V+TYN LI GYCK+G +    +   + K    NG+ P+  T+  L
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG---NGLKPDAWTYTEL 488

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF +   +  A  +F  M  HGI+   VTY ++I+G     K+D+A+AL  +M+ SG 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T N +I+GF K   + +A      + +QGL P+VITY + ID  C+ GR   AF 
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR--NIMNELVNNGMRAGLVTYNILVGA 443
           + + M  R   P++ TY+ LI GL +EG  E     N++  L + G    + TY  LV  
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC +G+  +A  L+     M+K+   P+   Y  L+ G C+  K+E A  +   +   G 
Sbjct: 669 LCGEGRCYEADQLV---VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 504 IPNQTTYQIVREEMMEKGFIPDIE 527
             + + Y+ +   + ++ FI + +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQ 749



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 217/447 (48%), Gaps = 13/447 (2%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P I++F  +     ++GKF     ++H +   +D L   ++  + L+       +    F
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             FK    +G   S  + N++++     G  +    ++ +M +     N+ ++N ++ G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G LN A  ++E MK  G+ P   TY  LI G+ +    GK+  A ++F  M+E+GI 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG---GKLEHATSLFYGMMEHGIS 514

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+  +IDG+     +  A+ +F +M   G      TYN +I+G      + EA   
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M+  GL PNV+T  + I+G C+      A  +F ++ ++   P++ TY++LI   C+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 377 EGRMEDA--FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           EGR EDA  + +   +   G  P+V TY  L+ GL  EG       ++  +   G++   
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y  L+   CK+ K + A+++    + M+      ++  Y  LI   C++  +E+A  +
Sbjct: 695 EIYRALLIGECKNLKVESALNIF---YSMDTLGFQLHLSDYKALICALCKENFIEEAQCI 751

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKG 521
              +LEK    ++  + ++ + ++++G
Sbjct: 752 FQTMLEKHWNSDEVAWTVLLDGLLKEG 778



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 8/368 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + L+  Y K    +      +     GLK    +  +L+    + GK E    ++
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M    I  N  ++  +++G     K++ A  +   M   G  P   TYN++I G+ K 
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             I +   A+     MV+ G+LPN +T+ + IDG C++     A K+F EM        +
Sbjct: 566 NSISE---AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622

Query: 295 VTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            TY+SLI GLC +G+ ++A    L   +   G +PNV T   L+ G C +    +A  L 
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + ++GL PS   Y  L+   CK  ++E A  +  SM   G    +S Y  LI  L +E
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +E  + I   ++     +  V + +L+  L K+G++   + LL     ME      N 
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLH---VMESRNCTLNF 799

Query: 473 VTYNVLIK 480
            TY +L +
Sbjct: 800 QTYVMLAR 807



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 7/324 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F + GK    +++F+ +      +  N +    ++  Y    K       F +  + G  
Sbjct: 492 FSRGGKLEHATSLFYGMM--EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            S  + N ++    K     + E    +M ++ +  N+ ++   ++GLC+ G+   A  I
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYKADAVFKDMVENGILPNEVTFNTLI 266
             +M+     P + TY+ LI G C++G     +MY    +   +   G  PN  T+ TL+
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN---LLARLTHYGCEPNVDTYTTLV 666

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G C +     A ++   M   G+      Y +L+ G C + K++ A+ +   M   G +
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++    ALI   CK+  +E+A+ +F  + E+  +   + +  L+D   KEG  +    +
Sbjct: 727 LHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKL 786

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLS 410
            + M  R    +  TY  L   LS
Sbjct: 787 LHVMESRNCTLNFQTYVMLARELS 810


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 219/386 (56%), Gaps = 9/386 (2%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +N K   G+E F +    G+   + + N+LLR L K+G  ++ E +  ++ +R +  N
Sbjct: 192 YEENFKAE-GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L ++N  + GLC+ G+L+ A  ++  +   G  P V+TYN LI G CK     K  +A+ 
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN---SKFQEAEV 307

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
               MV  G+ P+  T+NTLI G+CK   +  A ++  +   +G      TY SLI+GLC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G+ + A+AL +E +  G+KPNV+  N LI G   + ++ +A  L +++SE+GL P V 
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+N L++  CK G + DA  +   M+ +G  PD+ T+N LI G S +  +E    I++ +
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQ 484
           ++NG+   + TYN L+  LCK  K +  +    E +K   EK   PN+ T+N+L++  C+
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVM----ETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY 510
             KL++A GLL E+  K + P+  T+
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTF 569



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 227/511 (44%), Gaps = 72/511 (14%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
           DP+  L  F    KE+   H+L                   RS +      GKF ++  +
Sbjct: 19  DPMKALEMFNSMRKEVGFKHTL----------------STYRSVIEKLGYYGKFEAMEEV 62

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH-------LGFEAFKRAGDYGLKSSVLSC 154
              +        R ++   ML   YV  MK +            F+R   Y  + +V S 
Sbjct: 63  LVDM--------RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  LV  G F+    VY  M+ R I  ++ SF   +   CK  + + A  ++ +M S
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174

Query: 215 LGVSPKVVTYNILIDGY-----------------------------------CKKGGIGK 239
            G    VV Y  ++ G+                                   CKKG +  
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK- 233

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
             + + +   +++ G+LPN  T+N  I G C+   +  A+++   +   G    V+TYN+
Sbjct: 234 --ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI GLC + K  EA     +M+  GL+P+  T N LI G+CK  +V+ A  +  D    G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P   TY +LID  C EG    A A+ N  L +G+ P+V  YN LI GLS +G +    
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + NE+   G+   + T+NILV  LCK G    A  L+  M     +  +P+I T+N+LI
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI---SKGYFPDIFTFNILI 468

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            G+  + K+E+A  +L+ +L+ G+ P+  TY
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTY 499



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 170/325 (52%), Gaps = 4/325 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   G+K +V+  N L++ L  +G   +   +  EM  + +   + +FN ++NGLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G ++ A  +++ M S G  P + T+NILI GY  +    KM  A  +   M++NG+ P+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL---KMENALEILDVMLDNGVDPD 495

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+L++G CK       M+ ++ M   G A  + T+N L+  LC   KLDEA+ L +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKE 377
           EM    + P+ VT   LI+GFCK   ++ A  LF  + E   +S S  TYN +I A+ ++
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +  A  +   M+DR + PD  TY  ++ G  + GNV      + E++ NG    L T 
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
             ++  LC + +  +A  ++  M +
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 186/400 (46%), Gaps = 25/400 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS-FNFVLNGLCKAGKLNK 204
           G K ++ +   ++  L   GKFE +E V  +M+       L+  +   +    + GK+ +
Sbjct: 35  GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++ E M      P V +YN ++      G   + +K   V+  M + GI P+  +F  
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK---VYMRMRDRGITPDVYSFTI 151

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            +  FCK     AA+++   M S G    VV Y +++ G   +    E   L  +M+ASG
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +   + T N L+   CKK  V++   L D + ++G+ P++ TYN  I   C+ G ++ A 
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            M   ++++G  PDV TYN LI GL +    +     + ++VN G+     TYN L+   
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331

Query: 445 CKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           CK G  + A  ++ D +F        P+  TY  LI G C +G+   A  L NE L KG+
Sbjct: 332 CKGGMVQLAERIVGDAVFN----GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIE 527
            PN   Y                  +  EM EKG IP+++
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
            ++L+  Y   +K     E      D G+   V + N LL  L K  KFEDV   YK M 
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +    NL +FN +L  LC+  KL++A  ++E+MK+  V+P  VT+  LIDG+CK G + 
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 239 KMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
             Y    +F+ M E   +  +  T+N +I  F +  N++ A K+F+EM    +     TY
Sbjct: 584 GAY---TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
             +++G C  G ++       EMM +G  P++ T   +IN  C +  V +A  +   + +
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700

Query: 358 QGLSPSVITYNTLIDAYCKE 377
           +GL P  +  NT+ D   KE
Sbjct: 701 KGLVPEAV--NTICDVDKKE 718



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 16/160 (10%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGV 418
           + P ++  +      C++  M+ A  M NSM  + G    +STY  +I  L   G  E +
Sbjct: 1   MGPPLLPKHVTAVIKCQKDPMK-ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59

Query: 419 RNI---MNELVNNGMRAGLVTYNILVGAL---CKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +   M E V N M  G     + VGA+    + GK ++AV++ + M   + E   P +
Sbjct: 60  EEVLVDMRENVGNHMLEG-----VYVGAMKNYGRKGKVQEAVNVFERMDFYDCE---PTV 111

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
            +YN ++      G  + A+ +   + ++G+ P+  ++ I
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 223/424 (52%), Gaps = 11/424 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K+G+  +   +   ++   D +  N+I+  +     +K        E   R       
Sbjct: 137 YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQ-----AMEVLDRQLQKECY 191

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             V++   L+ A  KE        +  EM+ +  + ++ ++N ++NG+CK G+L++A   
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           + +M S G  P V+T+NI++   C  G   +   A+ +  DM+  G  P+ VTFN LI+ 
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTG---RWMDAEKLLSDMLRKGCSPSVVTFNILINF 308

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+   +  A+ + E+M  HG     ++YN L++G C + K+D A+   D M++ G  P+
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N L+   CK   V+ A  + + +S +G SP +ITYNT+ID   K G+ E A  + +
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD+ TY+ L++GLSREG V+      ++L   G+R   +TYN ++  LCK  
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           ++ +A+  L  M     ++  P   TY +LI+G   +G  ++A  LLNEL  +GL+   +
Sbjct: 489 QTDRAIDFLAYMI---SKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSS 545

Query: 509 TYQI 512
             Q+
Sbjct: 546 AEQV 549



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 208/365 (56%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+    K G+ ++   V   + R  +  ++ ++N +L  LC +GKL +A
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQA 178

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++        P V+TY ILI+  CK+ G+G+  K   +  +M   G  P+ VT+N L
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMK---LLDEMRNKGSKPDVVTYNVL 235

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK+  +  A+K    M S+G    V+T+N ++  +C  G+  +A  L  +M+  G 
Sbjct: 236 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 295

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LIN  C++ L+ +A  + + +   G +P+ ++YN L+  +CKE +M+ A  
Sbjct: 296 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 355

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M+ RG  PD+ TYN L+  L ++G V+    I+N+L + G    L+TYN ++  L 
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK+++A+ LLDEM    ++   P+I+TY+ L+ G  ++GK+++A    ++L   G+ P
Sbjct: 416 KVGKTERAIKLLDEM---RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 472

Query: 506 NQTTY 510
           N  TY
Sbjct: 473 NAITY 477



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 208/407 (51%), Gaps = 39/407 (9%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LR LV+ G+ ED     + M  R    ++     ++ G C+ GK  KA+ +ME ++  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 218 SPKVVTYNILIDGYCKKGGI-----------------------------GKMYKADAVFK 248
            P V+TYN+LI GYCK G I                             GK+ +A  V  
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
             ++    P+ +T+  LI+  CK+  +  AMK+ +EM + G    VVTYN LING+C +G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LDEA+   + M + G +PNV+T N ++   C       A  L  D+  +G SPSV+T+N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+  C++G +  A  +   M   G  P+  +YN L+ G  +E  ++     ++ +V+ 
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +VTYN L+ ALCKDGK   AV +L+++     +   P ++TYN +I G  + GK 
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQL---SSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG-------FIPDIEG 528
           E A  LL+E+  KGL P+  TY  +   +  +G       F  D+EG
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 223/424 (52%), Gaps = 11/424 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K+G+  +   +   ++   D +  N+I+  +     +K        E   R       
Sbjct: 194 YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQ-----AMEVLDRQLQKECY 248

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             V++   L+ A  KE        +  EM+ +  + ++ ++N ++NG+CK G+L++A   
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           + +M S G  P V+T+NI++   C     G+   A+ +  DM+  G  P+ VTFN LI+ 
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMC---STGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+   +  A+ + E+M  HG     ++YN L++G C + K+D A+   D M++ G  P+
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N L+   CK   V+ A  + + +S +G SP +ITYNT+ID   K G+ E A  + +
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD+ TY+ L++GLSREG V+      ++L   G+R   +TYN ++  LCK  
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           ++ +A+  L  M     ++  P   TY +LI+G   +G  ++A  LLNEL  +GL+   +
Sbjct: 546 QTDRAIDFLAYMI---SKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSS 602

Query: 509 TYQI 512
             Q+
Sbjct: 603 AEQV 606



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 208/365 (56%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+    K G+ ++   V   + R  +  ++ ++N +L  LC +GKL +A
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQA 235

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++        P V+TY ILI+  CK+ G+G+  K   +  +M   G  P+ VT+N L
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMK---LLDEMRNKGSKPDVVTYNVL 292

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK+  +  A+K    M S+G    V+T+N ++  +C  G+  +A  L  +M+  G 
Sbjct: 293 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 352

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LIN  C++ L+ +A  + + +   G +P+ ++YN L+  +CKE +M+ A  
Sbjct: 353 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 412

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M+ RG  PD+ TYN L+  L ++G V+    I+N+L + G    L+TYN ++  L 
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK+++A+ LLDEM    ++   P+I+TY+ L+ G  ++GK+++A    ++L   G+ P
Sbjct: 473 KVGKTERAIKLLDEM---RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 529

Query: 506 NQTTY 510
           N  TY
Sbjct: 530 NAITY 534



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 208/407 (51%), Gaps = 39/407 (9%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LR LV+ G+ ED     + M  R    ++     ++ G C+ GK  KA+ +ME ++  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 218 SPKVVTYNILIDGYCKKGGI-----------------------------GKMYKADAVFK 248
            P V+TYN+LI GYCK G I                             GK+ +A  V  
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
             ++    P+ +T+  LI+  CK+  +  AMK+ +EM + G    VVTYN LING+C +G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LDEA+   + M + G +PNV+T N ++   C       A  L  D+  +G SPSV+T+N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+  C++G +  A  +   M   G  P+  +YN L+ G  +E  ++     ++ +V+ 
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +VTYN L+ ALCKDGK   AV +L+++     +   P ++TYN +I G  + GK 
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQL---SSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG-------FIPDIEG 528
           E A  LL+E+  KGL P+  TY  +   +  +G       F  D+EG
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 222/413 (53%), Gaps = 47/413 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R   YG+  S  SCN +L  L      ++   +++E+     E N  S+N +L  LC AG
Sbjct: 216 RLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAG 267

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------- 237
           ++  A  + ++M S    P VVTY I++ GYC    +                       
Sbjct: 268 RIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 238 ---------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                    G++  A  V +DMV +G++ +   F T++ GFC+  +++AA   F+EM   
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+AA  VTY +LINGLC  G+L EA  +  EM   GL  + VT   LI+G+CK   + +A
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            ++ + + ++ ++P+V+TY  L D  CK+G +  A  + + M  +G+  ++ TYN LI G
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + GN+E     M ++   G++  + TY  ++GALC+  +  +A SLL EM  ++K  K
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM--LDKGIK 562

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVREEMMEK 520
            P IVTYNVL+ GFC  G++E    LL  +LEK + PN TTY  ++++  +EK
Sbjct: 563 -PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 196/354 (55%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    ++G        + EM++R +  +  ++  ++NGLC+AG+L +A  ++++M+  G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +    VTY +LIDGYCK   +GKM +A  V   MV+  + PN VT+  L DG CK  ++ 
Sbjct: 421 LDVDAVTYTVLIDGYCK---VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA ++  EM S G+   + TYNSLINGLC  G L++A+    +M  +GLKP+V T   +I
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C+ K +++A  L  ++ ++G+ P+++TYN L++ +C  GR+E    +   ML++ + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+     E N++    I   +++  +     TYNIL+   CK    K+A+  
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             EM  +EK  +     +YN LI+   +K K  +A  L  ++ +  L      Y
Sbjct: 658 HSEM--IEKGFRL-TASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ + ++   ++  L  EG+  D   V ++M    + L+   F  V++G C+ G L  A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +  ++M+  G++   VTY  LI+G C+    G++ +A+ V ++M + G+  + VT+  L
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRA---GELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK   ++ A  V  +M    +   VVTY +L +GLC  G +  A  L  EM + GL
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N+ T N+LING CK   +E+A     D+ E GL P V TY T+I A C+   ++ A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLD+G+ P + TYN L+ G    G VEG + ++  ++   +     TYN L+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +   K    +   M   E     PN  TYN+LIKG C+   +++A    +E++EKG   
Sbjct: 612 IEKNMKSTTEIYKGMLSQE---VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 506 NQTTY 510
             ++Y
Sbjct: 669 TASSY 673



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      GL +  ++   L+  L + G+ ++ E V +EM+ + ++++  ++  +++G CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK+ +A  +   M    V+P VVTY  L DG CK+G +     A+ +  +M   G+  N
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC---AANELLHEMCSKGLELN 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+LI+G CK  N+  AM+   +M   G+   V TY ++I  LC   +LD A +L  
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP +VT N L+NGFC    VE  + L + + E+ + P+  TYN+L+  YC E 
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+    +   ML + V+P+ +TYN LI G  +  N++      +E++  G R    +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L K  K  +A  L +   KM K++       YN  I     +  LE    L +EL
Sbjct: 675 ALIRLLNKKKKFTEARRLFE---KMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731

Query: 499 LEKGLI 504
           +E  L+
Sbjct: 732 VEVTLV 737



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 38/356 (10%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           D  +F L  LC       ++ ++  ++  G+SP   + N ++   C+      + +A  +
Sbjct: 197 DPVSFDLLLLCL-----PSAPLLLRLRQYGISPSPESCNAVL---CRL----PLDEAVQL 244

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+++ E     N  ++N L+   C    I  A ++F+EM S      VVTY  +++G C 
Sbjct: 245 FQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +L+ A+ L  EM A GL+ N V   ++I   C +  V  A  + +D+   G+      
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + T++  +C++G +  A    + M  RG+  D  TY  LI GL R G ++    ++ E+ 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+    VTY +L+   CK GK  +A  + +   KM +++  PN+VTY  L  G C++G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN---KMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 487 KLEDANGLLNELLEKGLIPNQTTY--------------QIVRE--EMMEKGFIPDI 526
            +  AN LL+E+  KGL  N  TY              Q +R   +M E G  PD+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 3/312 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++   +L+  Y K  K    F    +     +  +V++   L   L K+G       + 
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +ELN+ ++N ++NGLCKAG L +A   M DM   G+ P V TY  +I   C+ 
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++ +A ++ ++M++ GI P  VT+N L++GFC    +    ++ E M    I    
Sbjct: 544 ---KELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C++  +     +   M++  + PN  T N LI G CK + +++A     +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G   +  +YN LI    K+ +  +A  +   M    +  +   YN  I     E N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDN 720

Query: 415 VEGVRNIMNELV 426
           +E    + +ELV
Sbjct: 721 LESTLALCDELV 732



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 9/300 (3%)

Query: 69  LLHSLVVAKKY-PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           L+H+ +V K+  P + ++  +     K G   + + + H +  CS  L  N    + L+ 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLIN 503

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
              K               + GLK  V +   ++ AL +  + +    + +EM  + I+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + ++N ++NG C +G++     ++E M    + P   TYN L+  YC +     M    
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN---MKSTT 620

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++K M+   ++PNE T+N LI G CK  N+  A+    EM   G      +YN+LI  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
               K  EA  L ++M    L       N  I+    +  +E    L D++ E  L  S+
Sbjct: 681 NKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 32/226 (14%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+  + NA++   C+  L E  + LF ++ E+    +  +YN L+ A C  GR++DA
Sbjct: 221 GISPSPESCNAVL---CRLPLDEAVQ-LFQELPEK----NTCSYNILLKALCTAGRIKDA 272

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PDV TY  ++ G      +E    +++E+   G+    V Y  ++  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC +G+   AV ++++M          +   +  ++ GFC+KG L  A    +E+ ++GL
Sbjct: 330 LCDEGQVSDAVRVVEDMVM---HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 504 IPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
             +  TY                + V +EM +KG   D++   Y +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTV 430


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 222/413 (53%), Gaps = 47/413 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R   YG+  S  SCN +L  L      ++   +++E+     E N  S+N +L  LC AG
Sbjct: 216 RLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAG 267

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------- 237
           ++  A  + ++M S    P VVTY I++ GYC    +                       
Sbjct: 268 RIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 238 ---------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                    G++  A  V +DMV +G++ +   F T++ GFC+  +++AA   F+EM   
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+AA  VTY +LINGLC  G+L EA  +  EM   GL  + VT   LI+G+CK   + +A
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            ++ + + ++ ++P+V+TY  L D  CK+G +  A  + + M  +G+  ++ TYN LI G
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + GN+E     M ++   G++  + TY  ++GALC+  +  +A SLL EM  ++K  K
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM--LDKGIK 562

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVREEMMEK 520
            P IVTYNVL+ GFC  G++E    LL  +LEK + PN TTY  ++++  +EK
Sbjct: 563 -PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 197/354 (55%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    ++G        + EM++R +  +  ++  ++NGLC+AG+L +A  ++++M+  G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +    VTY +LIDGYCK   +GKM +A  V   MV+  + PN VT+  L DG CK  ++ 
Sbjct: 421 LDVDAVTYTVLIDGYCK---VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA ++  EM S G+   + TYNSLINGLC  G L++A+    +M  +GLKP+V T   +I
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C+ K +++A  L  ++ ++G+ P+++TYN L++ +C  GR+E    +   ML++ + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+     E N++    I   +++  +     TYNIL+   CK    K+A+  
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             EM  +EK  +     +YN LI+   +K K  +A  L  ++ ++ L      Y
Sbjct: 658 HSEM--IEKGFRL-TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ + ++   ++  L  EG+  D   V ++M    + L+   F  V++G C+ G L  A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +  ++M+  G++   VTY  LI+G C+    G++ +A+ V ++M + G+  + VT+  L
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRA---GELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK   ++ A  V  +M    +   VVTY +L +GLC  G +  A  L  EM + GL
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N+ T N+LING CK   +E+A     D+ E GL P V TY T+I A C+   ++ A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLD+G+ P + TYN L+ G    G VEG + ++  ++   +     TYN L+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +   K    +   M   E     PN  TYN+LIKG C+   +++A    +E++EKG   
Sbjct: 612 IEKNMKSTTEIYKGMLSQE---VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 506 NQTTY 510
             ++Y
Sbjct: 669 TASSY 673



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      GL +  ++   L+  L + G+ ++ E V +EM+ + ++++  ++  +++G CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK+ +A  +   M    V+P VVTY  L DG CK+G +     A+ +  +M   G+  N
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC---AANELLHEMCSKGLELN 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+LI+G CK  N+  AM+   +M   G+   V TY ++I  LC   +LD A +L  
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP +VT N L+NGFC    VE  + L + + E+ + P+  TYN+L+  YC E 
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+    +   ML + V+P+ +TYN LI G  +  N++      +E++  G R    +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L K  K  +A  L +   KM KE+       YN  I     +  LE    L +EL
Sbjct: 675 ALIRLLNKKKKFTEARRLFE---KMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731

Query: 499 LEKGLI 504
           +E  L+
Sbjct: 732 VEVTLV 737



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 38/356 (10%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           D  +F L  LC       ++ ++  ++  G+SP   + N ++   C+      + +A  +
Sbjct: 197 DPVSFDLLLLCL-----PSAPLLLRLRQYGISPSPESCNAVL---CRL----PLDEAVQL 244

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+++ E     N  ++N L+   C    I  A ++F+EM S      VVTY  +++G C 
Sbjct: 245 FQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +L+ A+ L  EM A GL+ N V   ++I   C +  V  A  + +D+   G+      
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + T++  +C++G +  A    + M  RG+  D  TY  LI GL R G ++    ++ E+ 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+    VTY +L+   CK GK  +A  + +   KM +++  PN+VTY  L  G C++G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN---KMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 487 KLEDANGLLNELLEKGLIPNQTTY--------------QIVRE--EMMEKGFIPDI 526
            +  AN LL+E+  KGL  N  TY              Q +R   +M E G  PD+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 3/312 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++   +L+  Y K  K    F    +     +  +V++   L   L K+G       + 
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +ELN+ ++N ++NGLCKAG L +A   M DM   G+ P V TY  +I   C+ 
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++ +A ++ ++M++ GI P  VT+N L++GFC    +    ++ E M    I    
Sbjct: 544 ---KELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C++  +     +   M++  + PN  T N LI G CK + +++A     +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G   +  +YN LI    K+ +  +A  +   M    +  +   YN  I     E N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDN 720

Query: 415 VEGVRNIMNELV 426
           +E    + +ELV
Sbjct: 721 LESTLALCDELV 732



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 9/300 (3%)

Query: 69  LLHSLVVAKKY-PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           L+H+ +V K+  P + ++  +     K G   + + + H +  CS  L  N    + L+ 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLIN 503

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
              K               + GLK  V +   ++ AL +  + +    + +EM  + I+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + ++N ++NG C +G++     ++E M    + P   TYN L+  YC +     M    
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN---MKSTT 620

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++K M+   ++PNE T+N LI G CK  N+  A+    EM   G      +YN+LI  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
               K  EA  L ++M    L       N  I+    +  +E    L D++ E  L  S+
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 32/226 (14%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+  + NA++   C+  L E  + LF ++ E+    +  +YN L+ A C  GR++DA
Sbjct: 221 GISPSPESCNAVL---CRLPLDEAVQ-LFQELPEK----NTCSYNILLKALCTAGRIKDA 272

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PDV TY  ++ G      +E    +++E+   G+    V Y  ++  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC +G+   AV ++++M          +   +  ++ GFC+KG L  A    +E+ ++GL
Sbjct: 330 LCDEGQVSDAVRVVEDMVM---HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 504 IPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
             +  TY                + V +EM +KG   D++   Y +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTV 430


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 214/388 (55%), Gaps = 7/388 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R   YG +++ ++   +L  + K G       ++++M+ R I+ ++  ++ V++ LCK G
Sbjct: 199 RMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDG 258

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            L+ A  +  +M+  G+   VV Y+ +I G C  G   +      + ++M+   I+PN V
Sbjct: 259 NLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDG---RWDDGAKMLREMIGRNIIPNVV 315

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF+ LID F K+  +  A +++ EM + GIA   +TY+SLI+G C + +L EA  + D M
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G +PN+VT + LIN +CK K V+    LF +IS +GL    +TYNTL+  +C+ G++
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +   M+ RGV P V TY  L+ GL   G ++    I  ++  + M  G+  YNI+
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +C   K   A SL      +  +   P+++TYNV+I G C+KG L +A+ L  ++ E
Sbjct: 496 IHGMCNASKVDDAWSLF---CSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552

Query: 501 KGLIPNQTTYQI-VREEMMEKGFIPDIE 527
            G  P+  TY I +R  +   G I  +E
Sbjct: 553 DGCAPSDCTYNILIRAHLGGSGVISSVE 580



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 194/339 (57%), Gaps = 6/339 (1%)

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           E N  +F+ ++NG C  G++++A  +++ M  +   P VVT N LI+G C KG   ++ +
Sbjct: 136 EPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKG---RVTE 192

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +   MV+ G   NE+T+  +++  CK  N + A+ +F +M    I A VV Y+ +I+
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC DG LD+A++L +EM   G+K +VV  +++I G C     +    +  ++  + + P
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V+T++ LID + KEG++ +A  + N M+ RG+ PD  TY+ LI G  +E  +     ++
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +V+ G    +VTY+IL+ + CK  +    + L  E   +  +    + VTYN L++GF
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE---ISSKGLVADTVTYNTLVQGF 429

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ GKL  A  L  E++ +G+ P+  TY I+ + + + G
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 468



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 216/387 (55%), Gaps = 8/387 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+    L  + F++  +  +K+SV+  + ++ +L K+G  +D   ++ EM+ + I+ ++ 
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVV 280

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +++ ++ GLC  G+ +  + ++ +M    + P VVT++ LID + K+   GK+ +A  ++
Sbjct: 281 AYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKE---GKLLEAKELY 337

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +MV  GI P+ +T+++LIDGFCK+  +  A ++ + M S G    +VTY+ LIN  C  
Sbjct: 338 NEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            ++D  + L  E+ + GL  + VT N L+ GFC+   +  A+ LF ++  +G+ PSV+TY
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             L+D  C  G ++ A  +   M    ++  +  YN +I G+     V+   ++   L  
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKG 486
            G++  ++TYN+++G LCK G   +A    D +F KM+++   P+  TYN+LI+      
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCAPSDCTYNILIRAHLGGS 573

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
            +  +  L+ E+  +G   + +T ++V
Sbjct: 574 GVISSVELIEEMKMRGFAADASTIKMV 600



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 197/351 (56%), Gaps = 17/351 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DSLC++  + D L L     MK              G+K+ V++ + ++  L  +G+++D
Sbjct: 252 DSLCKDGNLDDALSLFNEMEMK--------------GIKADVVAYSSIIGGLCNDGRWDD 297

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + +EM  R I  N+ +F+ +++   K GKL +A ++  +M + G++P  +TY+ LID
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK+  +G+   A+ +   MV  G  PN VT++ LI+ +CK + +   M++F E+ S G
Sbjct: 358 GFCKENRLGE---ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           + A  VTYN+L+ G C  GKL+ A  L  EM++ G+ P+VVT   L++G C    ++KA 
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F+ + +  +   +  YN +I   C   +++DA+++  S+  +GV PDV TYN +I GL
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            ++G++     +  ++  +G      TYNIL+ A         +V L++EM
Sbjct: 535 CKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEM 585



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 186/345 (53%), Gaps = 25/345 (7%)

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           D   ++  + RR+       ++ VL G CK   LN            G+   + T NI+I
Sbjct: 71  DFSKLFSAVARRK------EYDLVL-GFCKEMDLN------------GIEHNMYTMNIMI 111

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           + +C+K    K+  A +V    ++ G  PN +TF+TLI+GFC +  +S A+ + + M   
Sbjct: 112 NCFCRK---RKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
                VVT N+LINGLC+ G++ EA+ L D M+  G + N +T   ++N  CK      A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LF  + E+ +  SV+ Y+ +ID+ CK+G ++DA ++ N M  +G+  DV  Y+ +I G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L  +G  +    ++ E++   +   +VT++ L+    K+GK  +A  L +EM        
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV---ARGI 345

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            P+ +TY+ LI GFC++ +L +AN +L+ ++ KG  PN  TY I+
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 166/312 (53%), Gaps = 8/312 (2%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF-KDMVENGILPNE 259
           K+N+A D+ E M      P ++ ++ L     ++    K Y     F K+M  NGI  N 
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARR----KEYDLVLGFCKEMDLNGIEHNM 104

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            T N +I+ FC+   +  A  V       G     +T+++LING C++G++ EAVAL D 
Sbjct: 105 YTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDR 164

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+    +PNVVT N LING C K  V +A VL D + + G   + ITY  +++  CK G 
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
              A  +   M +R +   V  Y+ +I  L ++GN++   ++ NE+   G++A +V Y+ 
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++G LC DG+      +L EM         PN+VT++ LI  F ++GKL +A  L NE++
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMI---GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341

Query: 500 EKGLIPNQTTYQ 511
            +G+ P+  TY 
Sbjct: 342 ARGIAPDTITYS 353



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 172/305 (56%), Gaps = 6/305 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ + L+   VKEGK  + + +Y EM  R I  +  +++ +++G CK  +L +A+ ++
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           + M S G  P +VTY+ILI+ YCK   +    +   +F ++   G++ + VT+NTL+ GF
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMR---LFCEISSKGLVADTVTYNTLVQGF 429

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   ++ A ++F+EM S G+   VVTY  L++GLC +G+L +A+ + ++M  S +   +
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              N +I+G C    V+ A  LF  +S +G+ P V+TYN +I   CK+G + +A  +   
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549

Query: 390 MLDRGVLPDVSTYNCLI-AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           M + G  P   TYN LI A L   G +  V  ++ E+   G  A   T  ++V  +  DG
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVE-LIEEMKMRGFAADASTIKMVV-VMLSDG 607

Query: 449 KSKKA 453
           +  K 
Sbjct: 608 RLDKT 612



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A   +K+ + NGI+               D  ++ A+ +FE M        ++ ++ L 
Sbjct: 32  EAKVSYKERLRNGIV---------------DIKVNEAIDLFESMIQSRPLPSLIDFSKLF 76

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + +    + D  +    EM  +G++ N+ T N +IN FC+K+ +  A  +     + G  
Sbjct: 77  SAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFE 136

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ IT++TLI+ +C EGR+ +A A+ + M++    P+V T N LI GL  +G V     +
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++ +V  G  A  +TY  ++  +CK G +  A   LD   KME+     ++V Y+++I  
Sbjct: 197 IDRMVKYGCEANEITYGPVLNRMCKSGNTALA---LDLFRKMEERSIKASVVQYSIVIDS 253

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            C+ G L+DA  L NE+  KG+  +   Y 
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYS 283



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 112/205 (54%), Gaps = 4/205 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  L  +++  + L+  + ++ K ++  E F+     G+  SV++   LL  L   G+ +
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               ++++M++ R+ L +  +N +++G+C A K++ A  +   +   GV P V+TYN++I
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G CKKG +    +AD +F+ M E+G  P++ T+N LI        + +++++ EEM   
Sbjct: 532 GGLCKKGSLS---EADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMR 588

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEA 313
           G AA   T   ++  L  DG+LD+ 
Sbjct: 589 GFAADASTIKMVVVMLS-DGRLDKT 612



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ISE  +S      N ++D      ++ +A  +  SM+    LP +  ++ L + ++R   
Sbjct: 30  ISEAKVSYKERLRNGIVDI-----KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKE 84

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            + V     E+  NG+   + T NI++   C+  K   A S++    K   E   PN +T
Sbjct: 85  YDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFE---PNTIT 141

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++ LI GFC +G++ +A  L++ ++E    PN  T   +   +  KG + +
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTE 192


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 219/430 (50%), Gaps = 11/430 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  +  +G F ++  +F  +          + I  ++  AY K   P    E F R  
Sbjct: 69  SLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFI--LVFRAYGKAHLPEKAIELFGRMV 126

Query: 144 D-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYK--EMKRRRIELNLDSFNFVLNGLCKAG 200
           D +  + +V S N +L  +++EG F      Y+     +  I  N+ SFN V+  +CK G
Sbjct: 127 DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLG 186

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            +++A ++  +M      P V TY  L+DG CK+  I +   A  +  +M   G  P+ V
Sbjct: 187 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE---AVLLLDEMQIEGCFPSSV 243

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN LI+G CK  ++    K+ + M   G     VTYN++INGLC+ GKLD+AV+L D M
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +AS   PN VT   LING  K+        L   + E+G   +   Y+TLI    KE + 
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A  +   M+++G  P++  Y+ LI GL REG ++  + I+ E+VN G      TY+ L
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    K G S+KA+ +  E   M K    PN + Y+VLI G C+ GKL +A  +   +L 
Sbjct: 424 IKGFFKTGNSQKAIRVWKE---MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480

Query: 501 KGLIPNQTTY 510
           +GL P+   Y
Sbjct: 481 RGLRPDVVAY 490



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 229/456 (50%), Gaps = 4/456 (0%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           L GR++      +      S L++ ++ G F      +        ++  N +  ++++ 
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 180

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K        E F+       +  V +   L+  L KE + ++   +  EM+      
Sbjct: 181 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 240

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  +FN ++NGLCK G + + + ++++M   G  P  VTYN +I+G C KG   K+ KA 
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG---KLDKAV 297

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++   MV +  +PN+VT+ TLI+G  K       + +   +   G  A    Y++LI+GL
Sbjct: 298 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 357

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             + K +EA+ L  +M+  G +PN+V  +ALI+G C++  +++A+ +  ++  +G +P+ 
Sbjct: 358 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 417

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY++LI  + K G  + A  +   M     +P+   Y+ LI GL  +G +     +   
Sbjct: 418 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTH 477

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++  G+R  +V Y+ ++  LC  G  +  + L +EM   E + + P++VTYN+L++  C+
Sbjct: 478 MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ-PDVVTYNILLRALCK 536

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +  +  A  LLN +L++G  P+  T  I    + EK
Sbjct: 537 QNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 572



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 175/336 (52%), Gaps = 24/336 (7%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  LVK+G+  D  ++   ++ R    N  +++ +++GL K  K  +A  + + M   G
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +V Y+ LIDG C++G   K+ +A  +  +MV  G  PN  T+++LI GF K  N  
Sbjct: 378 CQPNIVVYSALIDGLCREG---KLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V++EM  +      + Y+ LI+GLC DGKL EA+ +   M+  GL+P+VV  +++I
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 337 NGFCKKKLVEKARVLFDDI--SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +G C    VE    LF+++   E    P V+TYN L+ A CK+  +  A  + NSMLDRG
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554

Query: 395 VLPDVSTYNCLIAGLSREGN-VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
             PD+ T N  +  L  + N  +  R  ++ELV       L     +VGA        K 
Sbjct: 555 CNPDLITCNIFLNALREKLNPPQDGREFLDELV-----VRLHKRQRIVGA-------AKI 602

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           + ++ + F        PN  T+  +I   C+  K++
Sbjct: 603 IEVMLQKFLP------PNASTWERIIPELCKPKKVQ 632



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 26/224 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  + + L++   K G  +    V+KEM +     N   ++ +++GLC+ GKL +A
Sbjct: 412 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 471

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVTFN 263
             +   M   G+ P VV Y+ +I G C  G +    K   +F +M+  E+   P+ VT+N
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK---LFNEMLCQESDSQPDVVTYN 528

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL------CVDGK--LDE--- 312
            L+   CK  +IS A+ +   M   G    ++T N  +N L        DG+  LDE   
Sbjct: 529 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVV 588

Query: 313 ----------AVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
                     A  + + M+   L PN  T   +I   CK K V+
Sbjct: 589 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 20/152 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD--SFNFVLNGLCKAGKLN 203
           GL+  V++ + ++  L   G  E    ++ EM  +  +   D  ++N +L  LCK   ++
Sbjct: 482 GLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSIS 541

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG------------IGKMYK------ADA 245
            A D++  M   G +P ++T NI ++   +K              + +++K      A  
Sbjct: 542 HAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAK 601

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           + + M++  + PN  T+  +I   CK + + A
Sbjct: 602 IIEVMLQKFLPPNASTWERIIPELCKPKKVQA 633


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 218/446 (48%), Gaps = 55/446 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S  +  L+    +N K + G++ F      G      +CN LL  L +EG F  +  + 
Sbjct: 269 SSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELM 328

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK--------SLGVSPKVVTYNI 226
           ++M    I+ N+ +F  ++N +CK  +++ A +++E M         S+ V P VV YN 
Sbjct: 329 EKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNT 388

Query: 227 LIDGYCKKG----GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           LIDG CK G    G+G M +  +      + G  P+ +T+N LIDGFCK   I    ++F
Sbjct: 389 LIDGLCKVGRQQEGLGLMERMRS------QKGCAPDTITYNCLIDGFCKAGEIEKGKELF 442

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   G+A  VVT N+L+ G+C  G++  AV    E    G+K + VT  ALIN FC  
Sbjct: 443 DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA------------------- 383
              EKA  LF+++ + G SP  I Y TLI  + + GRM DA                   
Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCY 562

Query: 384 ----------------FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
                           F M   M + G+ PD  TYN LIA  S+ G+++  + +M +++ 
Sbjct: 563 NTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIK 622

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   + TY  ++ A C +G   +A+ +  +M    K    PN V YN+LI   C+  K
Sbjct: 623 AGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVP--PNTVIYNILINSLCKNNK 680

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIV 513
           ++ A  L+ ++   G+ PN TTY  +
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAI 706



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 4/339 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++I  + L+  + K  +   G E F      G+  +V++ N L+  + + G+       +
Sbjct: 418 DTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            E +RR ++ +  ++  ++N  C      KA ++  +M   G SP  + Y  LI G+ + 
Sbjct: 478 VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQA 537

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +M  A  V  ++ + GI P+ V +NTLI GFC+        ++ +EM   G+    
Sbjct: 538 G---RMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LI     +G L  A  +  +M+ +G+ P V T  A+IN +C      +A  +F D
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654

Query: 355 I-SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           + +   + P+ + YN LI++ CK  +++ A ++   M   GV P+ +TYN +  GL  E 
Sbjct: 655 MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           ++E V   M+ ++ +      +T  IL   L   G+ ++
Sbjct: 715 DLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 35/410 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRA-----LVKEGK--FEDVEYVYKEMKRRRIELNLDSFNF 191
           +K + +  +  +V + + LLRA     LV+E    F D++   K    R + L++     
Sbjct: 145 YKTSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSI----- 199

Query: 192 VLNGLCKAGKLNKASDIMEDM----KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
               L ++G++  A  ++++M          P   T +IL     K+    ++   D + 
Sbjct: 200 ----LLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIV 255

Query: 248 KDMV---ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             ++   E+G+L +      LI   C++   +    +F EM   G        NSL+ GL
Sbjct: 256 NLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGL 315

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS---EQG-- 359
             +G  +    L ++M+   ++PNVVT   LIN  CK + V+ A  + + +S   E G  
Sbjct: 316 AREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375

Query: 360 ---LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNV 415
              + P V+ YNTLID  CK GR ++   +   M   +G  PD  TYNCLI G  + G +
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  + + +E+   G+   +VT N LVG +C+ G+   AV+   E    ++     + VTY
Sbjct: 436 EKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVE---AQRRGMKGDAVTY 492

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             LI  FC     E A  L NE+L+ G  P+   Y  +     + G + D
Sbjct: 493 TALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 161/332 (48%), Gaps = 6/332 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K G+      +F  ++   + +  N + ++ L+    +  +       F  A   G+K
Sbjct: 429 FCKAGEIEKGKELFDEMN--KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
              ++   L+ A      FE    ++ EM +     +   +  +++G  +AG++  AS +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           + ++K LG+ P  V YN LI G+C+     K ++   + K+M E G+ P+ +T+NTLI  
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCR---TNKFHRVFEMLKEMEEAGLKPDTITYNTLIAY 603

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL-RDEMMASGLKP 327
             K+ ++  A KV  +M   G+   V TY ++IN  C++G  +EA+ + +D   AS + P
Sbjct: 604 ASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPP 663

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V  N LIN  CK   V+ A  L +D+   G++P+  TYN +      E  +E  F   
Sbjct: 664 NTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFM 723

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + M++    PD  T   L   LS  G +E ++
Sbjct: 724 DRMIEHACNPDYITMEILTEWLSAVGEIERLK 755


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 219/430 (50%), Gaps = 11/430 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  +  +G F ++  +F  +          + I  ++  AY K   P    E F R  
Sbjct: 85  SLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFI--LVFRAYGKAHLPEKAIELFGRMV 142

Query: 144 D-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYK--EMKRRRIELNLDSFNFVLNGLCKAG 200
           D +  + +V S N +L  +++EG F      Y+     +  I  N+ SFN V+  +CK G
Sbjct: 143 DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLG 202

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            +++A ++  +M      P V TY  L+DG CK+  I +   A  +  +M   G  P+ V
Sbjct: 203 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE---AVLLLDEMQIEGCFPSSV 259

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TFN LI+G CK  ++    K+ + M   G     VTYN++INGLC+ GKLD+AV+L D M
Sbjct: 260 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +AS   PN VT   LING  K+        L   + E+G   +   Y+TLI    KE + 
Sbjct: 320 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 379

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A  +   M+++G  P++  Y+ LI GL REG ++  + I+ E+VN G      TY+ L
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    K G S+KA+ +  E   M K    PN + Y+VLI G C+ GKL +A  +   +L 
Sbjct: 440 IKGFFKTGNSQKAIRVWKE---MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496

Query: 501 KGLIPNQTTY 510
           +GL P+   Y
Sbjct: 497 RGLRPDVVAY 506



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 229/456 (50%), Gaps = 4/456 (0%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           L GR++      +      S L++ ++ G F      +        ++  N +  ++++ 
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 196

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K        E F+       +  V +   L+  L KE + ++   +  EM+      
Sbjct: 197 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 256

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  +FN ++NGLCK G + + + ++++M   G  P  VTYN +I+G C KG   K+ KA 
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG---KLDKAV 313

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++   MV +  +PN+VT+ TLI+G  K       + +   +   G  A    Y++LI+GL
Sbjct: 314 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 373

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             + K +EA+ L  +M+  G +PN+V  +ALI+G C++  +++A+ +  ++  +G +P+ 
Sbjct: 374 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 433

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY++LI  + K G  + A  +   M     +P+   Y+ LI GL  +G +     +   
Sbjct: 434 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTH 493

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++  G+R  +V Y+ ++  LC  G  +  + L +EM   E + + P++VTYN+L++  C+
Sbjct: 494 MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ-PDVVTYNILLRALCK 552

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +  +  A  LLN +L++G  P+  T  I    + EK
Sbjct: 553 QNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 588



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 175/336 (52%), Gaps = 24/336 (7%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  LVK+G+  D  ++   ++ R    N  +++ +++GL K  K  +A  + + M   G
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +V Y+ LIDG C++G   K+ +A  +  +MV  G  PN  T+++LI GF K  N  
Sbjct: 394 CQPNIVVYSALIDGLCREG---KLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V++EM  +      + Y+ LI+GLC DGKL EA+ +   M+  GL+P+VV  +++I
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 337 NGFCKKKLVEKARVLFDDI--SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +G C    VE    LF+++   E    P V+TYN L+ A CK+  +  A  + NSMLDRG
Sbjct: 511 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570

Query: 395 VLPDVSTYNCLIAGLSREGN-VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
             PD+ T N  +  L  + N  +  R  ++ELV       L     +VGA        K 
Sbjct: 571 CNPDLITCNIFLNALREKLNPPQDGREFLDELV-----VRLHKRQRIVGA-------AKI 618

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           + ++ + F        PN  T+  +I   C+  K++
Sbjct: 619 IEVMLQKFLP------PNASTWERIIPELCKPKKVQ 648



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 26/224 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  + + L++   K G  +    V+KEM +     N   ++ +++GLC+ GKL +A
Sbjct: 428 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 487

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVTFN 263
             +   M   G+ P VV Y+ +I G C  G +    K   +F +M+  E+   P+ VT+N
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK---LFNEMLCQESDSQPDVVTYN 544

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL------CVDGK--LDE--- 312
            L+   CK  +IS A+ +   M   G    ++T N  +N L        DG+  LDE   
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVV 604

Query: 313 ----------AVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
                     A  + + M+   L PN  T   +I   CK K V+
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 20/152 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD--SFNFVLNGLCKAGKLN 203
           GL+  V++ + ++  L   G  E    ++ EM  +  +   D  ++N +L  LCK   ++
Sbjct: 498 GLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSIS 557

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG------------IGKMYK------ADA 245
            A D++  M   G +P ++T NI ++   +K              + +++K      A  
Sbjct: 558 HAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAK 617

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           + + M++  + PN  T+  +I   CK + + A
Sbjct: 618 IIEVMLQKFLPPNASTWERIIPELCKPKKVQA 649


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  + +   ++  L K G  +    + K+M++ +IE ++  +  +++ LC    +N A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+ P VVTYN LI   C     G+   A  +  DM+E  I PN VTF+ L
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLC---NYGRWSDASRLLSDMIERKINPNVVTFSAL 331

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N LI GFCK K VE+   LF ++S++GL  + +TYNTLI    + G  + A  
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV PD+ TY+ L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +      D    +  +   PN++ Y  +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 512 KAGKVEDG---WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568

Query: 506 NQTTYQIVREEMMEKG 521
           N  TY  +    +  G
Sbjct: 569 NSGTYNTLIRARLRDG 584



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 181/322 (56%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ +V++ N L+R L   G++ D   +  +M  R+I  N+ +F+ +++   K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P + TY+ LI+G+C      ++ +A  +F+ M+     PN
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 394

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+NTLI GFCK + +   M++F EM   G+    VTYN+LI GL   G  D A  +  
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M++ G+ P+++T + L++G CK   +EKA V+F+ + +  + P + TYN +I+  CK G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  S+  +GV P+V  Y  +I+G  R+G  E    +  E+  +G      TYN
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG    +  L+ EM
Sbjct: 575 TLIRARLRDGDKAASAELIKEM 596



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 246/498 (49%), Gaps = 21/498 (4%)

Query: 41  ADPVLILR--YFCWSTKELRA--SHSLLLTGRL------LHSLVVAKKYPKIRSF---LH 87
           A P+  LR  YF  ++ + R   S ++LL  +L         +V ++  P I  F   L 
Sbjct: 29  ASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLS 88

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
              K  KF  V ++   +     S    S   ++L+  + +  +  L      +    G 
Sbjct: 89  AIAKMNKFDLVISLGERMQNLRISYDLYSY--NILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  +++ + LL       +  +   +  +M     + N  +FN +++GL    K ++A  
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ M + G  P + TY  +++G CK+G I     A ++ K M +  I  + V + T+ID
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIEADVVIYTTIID 263

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C  +N++ A+ +F EM + GI   VVTYNSLI  LC  G+  +A  L  +M+   + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT +ALI+ F K+  + +A  L+D++ ++ + P + TY++LI+ +C   R+++A  M 
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ +   P+V TYN LI G  +   VE    +  E+   G+    VTYN L+  L + 
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G    A  +     KM  +   P+I+TY++L+ G C+ GKLE A  +   L +  + P+ 
Sbjct: 444 GDCDMAQKIFK---KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 508 TTYQIVREEMMEKGFIPD 525
            TY I+ E M + G + D
Sbjct: 501 YTYNIMIEGMCKAGKVED 518



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 182/307 (59%), Gaps = 4/307 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++ +   +F++M + G++ N VT+NTLI
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A K+F++M S G+   ++TY+ L++GLC  GKL++A+ + + +  S ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++ T N +I G CK   VE    LF  +S +G+ P+VI Y T+I  +C++G  E+A A+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+  TYN LI    R+G+      ++ E+ + G      T ++++  L  
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616

Query: 447 DGKSKKA 453
           DG+ +K+
Sbjct: 617 DGRLEKS 623



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 159/289 (55%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F +MV++  LP+ V FN L+    K       + + E M +  I+  + +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LIN  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K + +A  L D +   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
              P+ +T+NTLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++  
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++ ++    + A +V Y  ++ ALC       A++L  EM   + +   PN+VTYN L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGIRPNVVTYNSL 296

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I+  C  G+  DA+ LL++++E+ + PN  T+  + +  +++G + + E
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 223/443 (50%), Gaps = 49/443 (11%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  DS C+  ++ + L L +              +    G   + ++ N L+  L   G
Sbjct: 206 NTMLDSFCKKGMVQEALQLLF--------------QMQAMGCSPNDVTYNVLVNGLSHSG 251

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           + E  + + ++M R  +E+++ +++ ++ G C+ G++ +AS + E+M S G  P VVTYN
Sbjct: 252 EMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYN 311

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            ++ G CK G +     A  +   MV   ++P+ V++NTLI G+ +  NI  A  +F E+
Sbjct: 312 TIMYGLCKWGRVSD---ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 368

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +A  VVTYN+LI+GLC  G LD A+ L+DEM+  G  P+V T    + GFCK   +
Sbjct: 369 RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL 428

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A+ LFD++  +GL P    Y T I    K G    AF M+  ML RG  PD+ TYN  
Sbjct: 429 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 488

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----- 460
           I GL + GN++    ++ +++ NG+    VTY  ++ A    G  +KA +L  EM     
Sbjct: 489 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGI 548

Query: 461 ---------------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
                                      F+M ++   PN++TYN LI G C+  K++ A  
Sbjct: 549 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYN 608

Query: 494 LLNELLEKGLIPNQTTYQIVREE 516
              E+  KG+ PN+ TY I+  E
Sbjct: 609 FFAEMQAKGISPNKYTYTILINE 631



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 270/536 (50%), Gaps = 41/536 (7%)

Query: 27  TDPNTVILQLFNSDADPVLILRYFCWSTKEL-----RASHSLLLTGRLLHSLVVAKKYPK 81
            +P  ++  L      PV+ LR+F W+ ++        S+S++L   L  + ++   Y  
Sbjct: 45  AEPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVIL-DILARNGLMRSAYCV 103

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +   + + ++NG       +   +S+   S+    +I+D+L+  YVK          F +
Sbjct: 104 MEKVVSVKMENG-------VIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYK 156

Query: 142 AGDYGLKSSVLSCNQLLRALV-KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
               GL   V +CN++LR L  ++   +    VY  M    I   + ++N +L+  CK G
Sbjct: 157 MVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            + +A  ++  M+++G SP  VTYN+L++G       G+M +A  + +DM+  G+  +  
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHS---GEMEQAKELIQDMLRLGLEVSVY 273

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T++ LI G+C+   I  A ++ EEM S G    VVTYN+++ GLC  G++ +A  L D M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +   L P++V+ N LI G+ +   + +A +LF ++  + L+PSV+TYNTLID  C+ G +
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +++ M+  G  PDV T+   + G  + GN+   + + +E++N G++     Y   
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    K G   KA  + +EM         P+++TYNV I G  + G L++A+ L+ ++L 
Sbjct: 454 IVGELKLGDPSKAFGMQEEML---ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLY 510

Query: 501 KGLIPNQTTYQIVRE----------------EMMEKGFIPDIEG-----HMYNISG 535
            GL+P+  TY  +                  EM+ KG  P +       H Y + G
Sbjct: 511 NGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRG 566



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 199/401 (49%), Gaps = 41/401 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ SV + + L+R   ++G+ E+   + +EM  R     + ++N ++ GLCK G+++ A
Sbjct: 267 GLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDA 326

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++ M +  + P +V+YN LI GY + G IG+ +    +F ++    + P+ VT+NTL
Sbjct: 327 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF---LLFAELRYRSLAPSVVTYNTL 383

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL--------------- 310
           IDG C+  ++  AM++ +EM  HG    V T+ + + G C  G L               
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 311 --------------------DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                                +A  +++EM+A G  P+++T N  I+G  K   +++A  
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 503

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L   +   GL P  +TY ++I A+   G +  A A+   ML +G+ P V TY  LI   +
Sbjct: 504 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYA 563

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G ++       E+   G+   ++TYN L+  LCK  K  +A +   EM   + +   P
Sbjct: 564 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM---QAKGISP 620

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           N  TY +LI   C  G  ++A  L  ++L++ + P+  T++
Sbjct: 621 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHR 661



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 150/279 (53%), Gaps = 3/279 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G    V +    +R   K G     + ++ EM  R ++ +  ++   + G  K G  +K
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 465

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  + E+M + G  P ++TYN+ IDG  K   +G + +A  + K M+ NG++P+ VT+ +
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFIDGLHK---LGNLKEASELVKKMLYNGLVPDHVTYTS 522

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I       ++  A  +F EM S GI   VVTY  LI+   V G+L  A+    EM   G
Sbjct: 523 IIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG 582

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PNV+T NALING CK + +++A   F ++  +G+SP+  TY  LI+  C  G  ++A 
Sbjct: 583 VHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEAL 642

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +   MLDR + PD  T+  L+  L+++  +  VR++ N
Sbjct: 643 RLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLEN 681



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 2/145 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H  +  G       +F  L   S  +  + +   +L+ +Y    +  L    F    
Sbjct: 522 SIIHAHLMAGHLRKARALF--LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+  +V++ N L+  L K  K +     + EM+ + I  N  ++  ++N  C  G   
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639

Query: 204 KASDIMEDMKSLGVSPKVVTYNILI 228
           +A  + +DM    + P   T+  L+
Sbjct: 640 EALRLYKDMLDREIQPDSCTHRSLL 664


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 218/424 (51%), Gaps = 41/424 (9%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +N    L F  F R    G   + ++ + L+  L  EG+ ++   + +EM  + 
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           IE  + ++   +  LC      +A +++  MK  G  P V TY  LI G  +   +GK+ 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 355

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  ++  M++ G++PN VT+N LI+  C     S A+K+F  M  HG  A   TYN +I
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING----------------------- 338
            GLC+ G +++A+ L ++M+  G  P VVT N LING                       
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 339 ------------FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
                       F K   +E A   F ++ E GL+P+ ++Y  LID + K+G+++ A ++
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  P+V +YN +I GLS+E        I +++V  G+   ++TY  L+  LC+
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G+++ A  +  +M   EK K  PN+ TY+ LI G CQ+GK ++A  LL E+  KGL P+
Sbjct: 596 NGRTQFAFKIFHDM---EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652

Query: 507 QTTY 510
           + T+
Sbjct: 653 EVTF 656



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 217/462 (46%), Gaps = 83/462 (17%)

Query: 137 EAFKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           E  +R  D+       G   S+ SCN LL  L K    E    +YK+M    I+ +L +F
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N ++N L K GK+ +A  I+  +    +SP V TY  LI G+C+   +   +    VF  
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF---GVFDR 258

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV-------------- 295
           MV+ G  PN VT++TLI+G C +  +  A+ + EEM   GI   V               
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318

Query: 296 ---------------------TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
                                TY +LI+GL   GKL+ A+ L  +M+  GL PN VT NA
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378

Query: 335 LIN-----------------------------------GFCKKKLVEKARVLFDDISEQG 359
           LIN                                   G C    +EKA VLF+ + + G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P+V+TYNTLI+ Y  +G + +A  + + M + G  PD  TYN L++G S+ G +E   
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
               E+V  G+    V+Y  L+    KDGK   A+SLL    +ME+    PN+ +YN +I
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK---RMEEMGCNPNVESYNAVI 555

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G  ++ +  +A  + ++++E+GL+PN  TY  + + +   G
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+  L   G+F     ++  M+      N  ++N ++ GLC  G + KA
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M  +G  P VVTYN LI+GY  KG +     A  +   M ENG  P+E T+N L
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN---AARLLDLMKENGCEPDEWTYNEL 484

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GF K   + +A   F+EM   G+    V+Y +LI+G   DGK+D A++L   M   G 
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV + NA+ING  K+    +A  + D + EQGL P+VITY TLID  C+ GR + AF 
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  R  LP++ TY+ LI GL +EG  +    ++ E+   G+    VT+  L+    
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             G+   A  LL  M  M  +   PN  TY+VL+KG 
Sbjct: 665 VLGRIDHAFLLLRRMVDMGCK---PNYRTYSVLLKGL 698



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 186/354 (52%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           +++A   E +   V     E+       +L S N +L  L K   +  A ++ + M + G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P ++T+N LI+   KKG   K+ +A+ +   + +  + P+  T+ +LI G C++ N+ 
Sbjct: 194 IQPSLLTFNTLINILSKKG---KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  VF+ M   G     VTY++LINGLC +G++DEA+ + +EM+  G++P V T    I
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C  +  E+A  L   + ++G  P+V TY  LI    + G++E A  + + ML  G++
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN LI  L   G       I + +  +G  A   TYN ++  LC  G  +KA+ L
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            ++M KM      P +VTYN LI G+  KG + +A  LL+ + E G  P++ TY
Sbjct: 431 FEKMLKM---GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 232/445 (52%), Gaps = 11/445 (2%)

Query: 80  PKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           PK+RS    LH   K+ K     + F  +      L  +    +M++    +        
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAG--LSPSVFTYNMVIGCLAREGDLEAAR 271

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             F+     GL+  +++ N L+    K G       V++EMK    E ++ ++N ++N  
Sbjct: 272 SLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCF 331

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK  ++ +A + +  MK  G+ P VVTY+ LID +CK G    + +A+  F DM+  G+ 
Sbjct: 332 CKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAG---MLLEANKFFVDMIRVGLQ 388

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PNE T+ +LID  CK  +++ A K+  EM   G+   +VTY +L++GLC DG++ EA  L
Sbjct: 389 PNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL 448

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              ++ +G   N     +L +G+ K K++EKA  + ++++++ L P ++ Y T I   C+
Sbjct: 449 FGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCR 508

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +  +ED+ A+   M+D G+  +   Y  LI    + G      N++ E+ + G++  +VT
Sbjct: 509 QNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT 568

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y +L+  LCK G  ++AV   D    M +    PNI+ Y  LI G C+   LE+A  L N
Sbjct: 569 YGVLIDGLCKIGLVQQAVRYFDH---MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
           E+L+KG+ P++  Y  + +  M+ G
Sbjct: 626 EMLDKGISPDKLVYTSLIDGNMKHG 650



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 218/426 (51%), Gaps = 10/426 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G  T   ++F  +    D+ C   +I  + L+  + K  +    FE     
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMK---DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              GL+ +V++ + L+ A  K G   +    + +M R  ++ N  ++  +++  CK G L
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDL 407

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           N+A  +  +M+  GV+  +VTY  L+DG C+ G   +M +A+ +F  +++ G   N+  +
Sbjct: 408 NEAFKLESEMQQAGVNLNIVTYTALLDGLCEDG---RMREAEELFGALLKAGWTLNQQIY 464

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            +L  G+ K + +  AM + EEM    +   ++ Y + I GLC   ++++++A+  EMM 
Sbjct: 465 TSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMD 524

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL  N      LI+ + K     +A  L  ++ + G+  +V+TY  LID  CK G ++ 
Sbjct: 525 CGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQ 584

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A    + M   G+ P++  Y  LI GL +   +E  +N+ NE+++ G+    + Y  L+ 
Sbjct: 585 AVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID 644

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G   +A+SL + M ++  E    ++  Y  LI GF + G+++ A  LL+E+L KG
Sbjct: 645 GNMKHGNPGEALSLRNRMVEIGMEL---DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG 701

Query: 503 LIPNQT 508
           +IP+Q 
Sbjct: 702 IIPDQV 707



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 186/367 (50%), Gaps = 39/367 (10%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK--KGGIGKMYKADAV 246
           F+ + N L   G L +A      M    V PKV + N L+    K  KGG+     A + 
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL-----ALSF 238

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           FKDMV  G+ P+  T+N +I    ++ ++ AA  +FEEM + G+   +VTYNSLI+G   
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L  AV++ +EM  +G +P+V+T N+LIN FCK + + +A      + ++GL P+V+T
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y+TLIDA+CK G + +A      M+  G+ P+  TY  LI    + G++     + +E+ 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------------------ 462
             G+   +VTY  L+  LC+DG+ ++A  L   + K                        
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 463 --------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                   M K+   P+++ Y   I G C++ ++ED+  ++ E+++ GL  N   Y  + 
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 539 DAYFKVG 545



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 189/424 (44%), Gaps = 57/424 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-------NSIIIDM 121
           L++     ++ P+   +LH   + G   +V T     ST  D+ C+       N   +DM
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTY----STLIDAFCKAGMLLEANKFFVDM 382

Query: 122 LMLAYVKNMKPHLGF-----------EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKF 167
           + +    N   +              EAFK   +    G+  ++++   LL  L ++G+ 
Sbjct: 383 IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            + E ++  + +    LN   +  + +G  KA  + KA DI+E+M    + P ++ Y   
Sbjct: 443 REAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502

Query: 228 IDGYCKKGGI--------------------------------GKMYKADAVFKDMVENGI 255
           I G C++  I                                GK  +A  + ++M + GI
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
               VT+  LIDG CK   +  A++ F+ M  +G+   ++ Y +LI+GLC +  L+EA  
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM+  G+ P+ +   +LI+G  K     +A  L + + E G+   +  Y +LI  + 
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G+++ A ++ + ML +G++PD     CL+      G++     + +++   G+ +G +
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742

Query: 436 TYNI 439
              +
Sbjct: 743 DITV 746



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           G   +++L N L   G L+EA     +M    + P V + N L++   K      A   F
Sbjct: 180 GFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFF 239

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+   GLSPSV TYN +I    +EG +E A ++   M  +G+ PD+ TYN LI G  + 
Sbjct: 240 KDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKV 299

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G + G  ++  E+ + G    ++TYN L+   CK  +  +A   L     M++    PN+
Sbjct: 300 GMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH---GMKQRGLQPNV 356

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           VTY+ LI  FC+ G L +AN    +++  GL PN+ TY
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTY 394



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 3/198 (1%)

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P     + L N      ++E+AR  F  +++  + P V + N L+    K  +   A +
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+  G+ P V TYN +I  L+REG++E  R++  E+   G+R  +VTYN L+    
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G    AVS+ +EM     E   P+++TYN LI  FC+  ++  A   L+ + ++GL P
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCE---PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 506 NQTTYQIVREEMMEKGFI 523
           N  TY  + +   + G +
Sbjct: 355 NVVTYSTLIDAFCKAGML 372


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 254/534 (47%), Gaps = 76/534 (14%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+ L    ++H LV + +    +S +   ++    + V  +   +ST S+    +S+  D
Sbjct: 101 HTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF-D 159

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  +V+  K    +EAF      G   S+ +CN L+ +LV+ G  E    +Y+E+ R 
Sbjct: 160 LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS 219

Query: 181 RIELNLDSFNFVLNGLCKAGKLNK-----------------------------------A 205
            + +N+ + N ++N LCK GK+ K                                   A
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
            ++M  M S G SP V TYN +I+G CK G                              
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G   + + +F DM    ++P+ V F++++  F +  N+  A+  F  +   G+   
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            V Y  LI G C  G + EA+ LR+EM+  G   +VVT N +++G CK+K++ +A  LF+
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +++E+GL P   T   LID +CK G +++A  +   M ++ +  DV TYN L+ G  + G
Sbjct: 460 EMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVG 519

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++  + I  ++V+  +    ++++ILV ALC  G   +A  + DEM  + K  K P ++
Sbjct: 520 DIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEM--ISKSIK-PTVM 576

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIP-----NQTTYQIVREEMMEKGF 522
             N +IKG+C+ G   D    L +++ +G +P     N   Y  V+EE M K F
Sbjct: 577 ICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 215/407 (52%), Gaps = 24/407 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F      GL     +   LL    K+G   + E ++ +M+ R +  +L  F+ +++  
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            ++G L+KA      +K  G+ P  V Y ILI GYC+KG I +   A  +  +M++ G  
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE---AMNLRNEMLQQGCA 432

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+NT++ G CK + +  A K+F EM   G+     T   LI+G C  G L  A+ L
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M    +K +VVT N L++GF K   ++ A+ ++ D+  + + P+ I+++ L++A C 
Sbjct: 493 FKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCS 552

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G + +AF + + M+ + + P V   N +I G  R GN       + ++++ G     ++
Sbjct: 553 KGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCIS 612

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGL 494
           YN L+    K+    KA  L+    KME+++    P++ TYN ++ GFC++ ++++A  +
Sbjct: 613 YNTLIYGFVKEENMSKAFGLVK---KMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669

Query: 495 LNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           L +++E+G+ P+++TY  +                 +EM+++GF PD
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 190/384 (49%), Gaps = 23/384 (5%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR----RIEL-------------NLDSF 189
            K + LS + ++  LV+ G+  D +     M RR    R+E+             N   F
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + ++    +A KL +A +    ++S G +  +   N LI    + G +   ++   ++++
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWR---IYQE 215

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +  +G+  N  T N +++  CKD  +        E+   G+   +VTYN+LI+     G 
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           ++EA  L   M + G  P V T N +ING CK    E+A+ +F ++   GLSP   TY +
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+   CK+G   +   + + M  R V+PD+  ++ +++  +R GN++      N +   G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    V Y IL+   C+ G   +A++L +EM    ++    ++VTYN ++ G C++  L 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEML---QQGCAMDVVTYNTILHGLCKRKMLG 452

Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
           +A+ L NE+ E+GL P+  T  I+
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTIL 476



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF--VLNGLCKAGKLN 203
           G     +S N L+   VKE        + K+M+ ++  L  D F +  +L+G C+  ++ 
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNE 259
           +A  ++  M   GV+P   TY  LI+G+  +  + + ++    F D M++ G  P++
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFR----FHDEMLQRGFSPDD 717


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  + +   ++  L K G  +    + K+M++ +IE ++  +  +++ LC    +N A
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+ P VVTYN LI   C     G+   A  +  DM+E  I PN VTF+ L
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLC---NYGRWSDASRLLSDMIERKINPNVVTFSAL 315

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 316 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 375

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N LI GFCK K VE+   LF ++S++GL  + +TYNTLI    + G  + A  
Sbjct: 376 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 435

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV PD+ TY+ L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 436 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 495

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   PN++ Y  +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 496 KAGKVEDGWDLF---CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 552

Query: 506 NQTTYQIVREEMMEKG 521
           N  TY  +    +  G
Sbjct: 553 NSGTYNTLIRARLRDG 568



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 181/322 (56%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ +V++ N L+R L   G++ D   +  +M  R+I  N+ +F+ +++   K
Sbjct: 262 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 321

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P + TY+ LI+G+C      ++ +A  +F+ M+     PN
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 378

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+NTLI GFCK + +   M++F EM   G+    VTYN+LI GL   G  D A  +  
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 438

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M++ G+ P+++T + L++G CK   +EKA V+F+ + +  + P + TYN +I+  CK G
Sbjct: 439 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  S+  +GV P+V  Y  +I+G  R+G  E    +  E+  +G      TYN
Sbjct: 499 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 558

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG    +  L+ EM
Sbjct: 559 TLIRARLRDGDKAASAELIKEM 580



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 246/498 (49%), Gaps = 21/498 (4%)

Query: 41  ADPVLILR--YFCWSTKELRA--SHSLLLTGRL------LHSLVVAKKYPKIRSF---LH 87
           A P+  LR  YF  ++ + R   S ++LL  +L         +V ++  P I  F   L 
Sbjct: 13  ASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLS 72

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
              K  KF  V ++   +     S    S   ++L+  + +  +  L      +    G 
Sbjct: 73  AIAKMNKFDLVISLGERMQNLRISYDLYSY--NILINCFCRRSQLPLALAVLGKMMKLGY 130

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  +++ + LL       +  +   +  +M     + N  +FN +++GL    K ++A  
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ M + G  P + TY  +++G CK+G I     A ++ K M +  I  + V + T+ID
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIEADVVIYTTIID 247

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C  +N++ A+ +F EM + GI   VVTYNSLI  LC  G+  +A  L  +M+   + P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT +ALI+ F K+  + +A  L+D++ ++ + P + TY++LI+ +C   R+++A  M 
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ +   P+V TYN LI G  +   VE    +  E+   G+    VTYN L+  L + 
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 427

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G    A  +     KM  +   P+I+TY++L+ G C+ GKLE A  +   L +  + P+ 
Sbjct: 428 GDCDMAQKIFK---KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484

Query: 508 TTYQIVREEMMEKGFIPD 525
            TY I+ E M + G + D
Sbjct: 485 YTYNIMIEGMCKAGKVED 502



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 182/307 (59%), Gaps = 4/307 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++ +   +F++M + G++ N VT+NTLI
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLI 421

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A K+F++M S G+   ++TY+ L++GLC  GKL++A+ + + +  S ++
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++ T N +I G CK   VE    LF  +S +G+ P+VI Y T+I  +C++G  E+A A+
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+  TYN LI    R+G+      ++ E+ + G      T ++++  L  
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 600

Query: 447 DGKSKKA 453
           DG+ +K+
Sbjct: 601 DGRLEKS 607



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 159/289 (55%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F +MV++  LP+ V FN L+    K       + + E M +  I+  + +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LIN  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K + +A  L D +   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
              P+ +T+NTLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++  
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++ ++    + A +V Y  ++ ALC       A++L  EM   + +   PN+VTYN L
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGIRPNVVTYNSL 280

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I+  C  G+  DA+ LL++++E+ + PN  T+  + +  +++G + + E
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/542 (29%), Positives = 259/542 (47%), Gaps = 31/542 (5%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRL 69
           +DI  LI  HH         N +   L    +D V  L +F W   +L    S L    +
Sbjct: 85  DDIKGLI--HHLGA------NEISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLI 136

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           LH L  +K++ +   FL   +   K T    +F  L  C      + II D+L+ AYVK 
Sbjct: 137 LHVLAWSKEFEQAMKFLTELILLVKDTD-EDVFQCLFLCCQDCNWDPIIFDLLLKAYVKA 195

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                GF  F +  + G   SV++CN LL  L+K        +VY EM R  +  N  +F
Sbjct: 196 GMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTF 255

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N + +  CK G ++K +D +E M+  G  P +VTYN LI+GYC   G G++  A  +++ 
Sbjct: 256 NILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYC---GRGRLSDAFYLYRI 312

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M    +LP+ V++  L++G CK+  +  A ++   M   G+   VV+YN+LI G C +GK
Sbjct: 313 MYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGK 372

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + E+ +L  EM+ +G+ P+  T   LI G+ K+  +  A  L  ++ + G+S S   Y+ 
Sbjct: 373 MLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDY 432

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+ + C+E R   A  +   M  RG +P V  YN LI  L +   V    ++  E+V   
Sbjct: 433 LVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGN 492

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   L+TY  L+  LC+ G+S +A  L++EM     +   P+      +I G+C++    
Sbjct: 493 INPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQ---PDPEICRAMIHGYCREKDAG 549

Query: 490 DANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
            A  LL    ++  I +  +Y                  ++E M++ GF P+     Y I
Sbjct: 550 KAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMI 609

Query: 534 SG 535
            G
Sbjct: 610 DG 611



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 67/333 (20%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++ N L+      G+  D  Y+Y+ M RR +  +L S+  ++NGLCK G++ +A
Sbjct: 282 GFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREA 341

Query: 206 SDIMEDMKSLGVSPKVVTYN-----------------------------------ILIDG 230
             ++  M   G++P VV+YN                                   +LI G
Sbjct: 342 HQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQG 401

Query: 231 YCKKGGI--------------------------------GKMYKADAVFKDMVENGILPN 258
           Y K+G +                                 + + A  + + M + G +P+
Sbjct: 402 YRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPH 461

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              +N LI+  CK + ++ A+ +  E+    I   ++TY +LI  LC  G+  EA  L +
Sbjct: 462 VEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLME 521

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  GL+P+     A+I+G+C++K   KA  L    +++       +Y+TL+   C++G
Sbjct: 522 EMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDG 581

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +     ++  ML  G  P+  T   +I GL +
Sbjct: 582 DVAKFMELQERMLKVGFAPNSLTCKYMIDGLRK 614



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/240 (19%), Positives = 103/240 (42%), Gaps = 32/240 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     +C  L++   KEG       +  E+++  + ++ D +++++  LC+  +   A
Sbjct: 387 GIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAA 446

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             ++E M   G  P V  YN LI+  CK   +                            
Sbjct: 447 KTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRC 506

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+  +A+ + ++M+  G+ P+      +I G+C++++   A  +            
Sbjct: 507 LCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFD 566

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             +Y++L+  +C DG + + + L++ M+  G  PN +T   +I+G  K   + K +++ +
Sbjct: 567 SESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKEKLILE 626


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 214/398 (53%), Gaps = 11/398 (2%)

Query: 133 HLGFEAFK-----RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           HLG  AF      +    G +   ++ N L++ L  +G+ +   + + ++  +  +++  
Sbjct: 57  HLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHV 116

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+  +LNGLCK G+   A  ++  ++     P VV YN +IDG CK   + + Y    ++
Sbjct: 117 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYD---LY 173

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M   GI P+ +T+ TLI GFC    +  A  + +EM    I  GV  YN LIN LC +
Sbjct: 174 SEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKE 233

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G + EA  L   M   G+KP VVT + L++G+C    V+ A+ +F  + + G++P+V +Y
Sbjct: 234 GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +I+  CK  R+++A  +   ML + ++PD  TYN LI GL + G +    N+MNE+ +
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G  A +VTY  L+ ALCK+    KA +L     KM++    P + TY  LI G C+ G+
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALF---MKMKERGIQPTMYTYTALIDGLCKGGR 410

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           L++A  L   LL KG   +  TY ++   + ++G   +
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 448



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 211/403 (52%), Gaps = 35/403 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++  N++L +L K  ++     + K+M+ + I  N  + N ++N  C  G++  +  ++ 
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKM-----------YKADAVFKDMVENGIL--- 256
            +  LG  P  +T N L+ G C KG + K            ++ D V    + NG+    
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 257 ------------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
                             PN V +NT+IDG CKD+ ++ A  ++ EM + GI    +TY 
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C+ G+L  A +L DEM+   + P V   N LIN  CK+  V++A+ L   ++++
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P V+TY+TL+D YC  G +++A  + ++M+  GV P+V +YN +I GL +   V+  
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N++ E+++  M    VTYN L+  LCK G+   A++L++E   M    +  ++VTY  L
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE---MHHRGQPADVVTYTSL 366

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +   C+   L+ A  L  ++ E+G+ P   TY  + + + + G
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 207/399 (51%), Gaps = 24/399 (6%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D LC++ ++ +               ++ +      G+    ++   L+      G
Sbjct: 154 NTIIDGLCKDKLVNE--------------AYDLYSEMDARGIFPDAITYTTLIYGFCLLG 199

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +      +  EM  + I   +  +N ++N LCK G + +A +++  M   G+ P VVTY+
Sbjct: 200 QLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYS 259

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC    +G++  A  +F  MV+ G+ PN  ++N +I+G CK + +  AM +  EM
Sbjct: 260 TLMDGYCL---VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 316

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +    VTYNSLI+GLC  G++  A+ L +EM   G   +VVT  +L++  CK + +
Sbjct: 317 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 376

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA  LF  + E+G+ P++ TY  LID  CK GR+++A  +   +L +G   DV TY  +
Sbjct: 377 DKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVM 436

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I+GL +EG  +    I +++ +NG     VT+ I++ +L +  ++ KA  LL EM     
Sbjct: 437 ISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA--- 493

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                 ++  +  +     + + + A  LL+E++ KGL+
Sbjct: 494 ----KGLLVLDFKVADVFVQNENDKAEKLLHEMIAKGLL 528



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 186/335 (55%), Gaps = 6/335 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +L  L K  +   A  + + M+  G+    VT NILI+ +C    +G+M  + +V  
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCH---LGQMAFSFSVLG 69

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +++ G  P+ +T NTL+ G C    +  ++   +++ + G     V+Y +L+NGLC  G
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   AV L   +     +PNVV  N +I+G CK KLV +A  L+ ++  +G+ P  ITY 
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI  +C  G++  AF++ + M+ + + P V  YN LI  L +EGNV+  +N++  +   
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++ G+VTY+ L+   C  G+ + A  +   M +M      PN+ +YN++I G C+  ++
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN---PNVYSYNIMINGLCKCKRV 306

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++A  LL E+L K ++P+  TY  + + + + G I
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 54/320 (16%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P  + FN ++    K +    A+ + ++M   GI A  VT N LIN  C  G++  + ++
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G +P+ +T N L+ G C K  V+K+    D +  QG     ++Y TL++  CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 377 EGRMEDA---------------FAMRNSMLD--------------------RGVLPDVST 401
            G    A                 M N+++D                    RG+ PD  T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI G    G + G  ++++E++   +  G+  YNIL+ ALCK+G  K+A +LL    
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLA--- 244

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
            M KE   P +VTY+ L+ G+C  G++++A  + + +++ G+ PN  +Y I         
Sbjct: 245 VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 304

Query: 513 -------VREEMMEKGFIPD 525
                  +  EM+ K  +PD
Sbjct: 305 RVDEAMNLLREMLHKNMVPD 324



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 32/182 (17%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P +I +N ++ +  K  +   A ++   M  +G+  +  T N LI      G +    +
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----FKM------------- 463
           ++ +++  G +   +T N L+  LC  G+ KK++   D++    F+M             
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 464 ---------------EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
                          E     PN+V YN +I G C+   + +A  L +E+  +G+ P+  
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 509 TY 510
           TY
Sbjct: 187 TY 188


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 221/456 (48%), Gaps = 51/456 (11%)

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           IFH    C D+    S+II      + KN    L FE F R    G   + ++ + L+  
Sbjct: 228 IFH-YGACPDTFTYTSLII-----GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALING 281

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L  EG+ E+   + +EM  + IE  + ++   +  LC AG+  +A  ++  MK  G  P 
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPN 341

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V TY  LI G  + G   K   A  V+  M+ +G++P  VT++ LI+    +     A+ 
Sbjct: 342 VQTYTALISGLSRDG---KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALT 398

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA------ 334
           +FE M SH       TYN +I G C  G + +A A+ D+M+ +G  PNV+T N       
Sbjct: 399 IFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYF 458

Query: 335 -----------------------------LINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
                                        LI+GF +   +E A  LF+++ E G+SP+V+
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN +I+ Y    +++DA A+   M++ G +P   TYN +I+G S+   +    N   ++
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G+   ++TY   +  LCK+G++  A  +  E   M+K   +PN+ TY+ LI G CQ+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE---MKKRDYFPNLCTYSSLIDGLCQE 635

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G+ EDA      LL+ G  PN  TY  +   +  KG
Sbjct: 636 GQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKG 667



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 194/366 (53%), Gaps = 10/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ + L+  L  EG+FE    +++ M       N +++N ++ G C  G + KA
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + I + M   G SP V+TYNI+I  Y K+G    M  A  + + M  NG+  +  T+  L
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQG---YMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF +   +  A  +F EM  HGI+  VVTYN++ING     K+D+A+AL  +M+ SG 
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T N +I+GF K   + +A      + +QGL P+VITY + ID  CK GR   AF 
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M  R   P++ TY+ LI GL +EG  E        L+++G    + TY  LV  LC
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE----RLLDDGCEPNVDTYTTLVRGLC 664

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+  +A  L++ M   +K+   P+   Y  L+ G C+  ++E A  + + ++  G  P
Sbjct: 665 GKGRCYEADQLVESM---KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721

Query: 506 NQTTYQ 511
             + Y+
Sbjct: 722 CLSDYK 727



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 153/278 (55%), Gaps = 3/278 (1%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V+ +M+ +GI PN  TFN +I   C    +  A  +   +  +G      TY SLI G C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G LD A  + D M+  G  PN VT +ALING C +  +E+A  + +++ ++G+ P+V 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y   I + C  GR  +A  +   M  RG  P+V TY  LI+GLSR+G  E    + +++
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           + +G+    VTY+ L+  L  +G+ + A+++ + M   +     PN  TYNV+IKGFC  
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS---LPNTETYNVIIKGFCSI 425

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G ++ A  + +++L+ G  PN  TY I+     ++G++
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 42/393 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           ++++   EG+ + V  V  E+         L SF+ +L  L K        D+  +M + 
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNS 196

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P + T+N +I   C K   GK+ +A+ +   +   G  P+  T+ +LI G CK+ N+
Sbjct: 197 GIRPNLFTFNAMIKILCNK---GKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A ++F+ M   G     VTY++LINGLC +G+L+EA+ + +EM+  G++P V      
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I   C      +A  L   + ++G  P+V TY  LI    ++G+ E A  + + ML  G+
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P   TY+ LI  L  EG  E    I   ++++       TYN+++   C  G  +KA +
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433

Query: 456 LLDEMFKMEKEKKWPNIVTYNV-----------------------------------LIK 480
           + D+M K       PN++TYN+                                   LI 
Sbjct: 434 IFDQMLKAGPS---PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           GF + GKLE A  L NE++E G+ PN  TY  +
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 9/331 (2%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           +H++ K G   +   +   +    + L  ++     L+  + +  K    F  F    ++
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMK--GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++ N ++   +   K +D   ++ +M       +  ++N +++G  K  ++++A
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +    M   G+ P V+TY   IDG CK G     +K   +F +M +    PN  T+++L
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK---IFHEMKKRDYFPNLCTYSSL 628

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG C++     A ++ ++    G    V TY +L+ GLC  G+  EA  L + M   GL
Sbjct: 629 IDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGL 684

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+     AL+ G CK   VE A  +FD +   G  P +  Y  LI A CK    + A  
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQC 744

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           M  +ML +    D   +  L+ GL +EG  +
Sbjct: 745 MFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 210/397 (52%), Gaps = 35/397 (8%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ N L+  L   G+ E  + + +EM R  +E++  +++ ++ G C+ G+L++AS + E+
Sbjct: 226 VTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEE 285

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S G  P +VTYN ++ G CK    G++  A  +   MV   ++P+ V++NTLI G+ +
Sbjct: 286 MLSRGAVPTLVTYNTIMYGLCK---WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 342

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             NI  A  +F E+   G+   VVTYN+LI+GLC  G LD A+ L+DEM+  G  P+V T
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFT 402

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              L+ GFCK   +  A+ LFD++  +GL P    Y T I    K G    AF M+  ML
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG  PD+ TYN  I GL + GN++    ++ +++ NG+    VTY  ++ A    G  +
Sbjct: 463 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 522

Query: 452 KAVSLLDEM--------------------------------FKMEKEKKWPNIVTYNVLI 479
           KA ++  EM                                F+M ++   PN++TYN LI
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            G C+  K++ A     E+  KG+ PN+ TY I+  E
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINE 619



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 260/532 (48%), Gaps = 45/532 (8%)

Query: 27  TDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL 86
            +P  ++  L      P + LR+F W+ ++         TG     L  A         L
Sbjct: 45  AEPQLLVRVLNTVRHRPAVALRFFRWAERQ---------TGFKRSELTYA-------VIL 88

Query: 87  HMFVKNGKFTSVSTIFH-ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
            +  +NG   S   +    +S   ++   + +I+D+L+  Y K          F +    
Sbjct: 89  DILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSK 148

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G+   + +CN++LR L       DV   VY  M    I   + ++N +L+  CK GK+ +
Sbjct: 149 GMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++  M+ +G  P  VTYN+L++G       G++ +A  + ++M+  G+  +  T++ 
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHS---GELEQAKELIQEMLRLGLEVSAYTYDP 265

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+C+   +  A ++ EEM S G    +VTYN+++ GLC  G++ +A  L D M+   
Sbjct: 266 LIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 325

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L P++V+ N LI G+ +   + +A +LF ++  +GL PSV+TYNTLID  C+ G ++ A 
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAM 385

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +++ M+  G  PDV T+  L+ G  + GN+   + + +E++N G++     Y   +   
Sbjct: 386 RLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 445

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G   KA  + +EM         P+++TYNV I G  + G L++A+ L+ ++L  GL+
Sbjct: 446 LKLGDPSKAFGMQEEML---ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 502

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDIEG-----HMYNISG 535
           P+  TY                + V  EM+ KG  P +       H Y + G
Sbjct: 503 PDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRG 554



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 176/334 (52%), Gaps = 6/334 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   ++S N L+    + G   +   ++ E++ R +  ++ ++N +++GLC+ G L+ A 
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAM 385

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + ++M   G  P V T+ IL+ G+CK   +G +  A  +F +M+  G+ P+   + T I
Sbjct: 386 RLKDEMIKHGPDPDVFTFTILVRGFCK---LGNLPMAKELFDEMLNRGLQPDRFAYITRI 442

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  K  + S A  + EEM + G    ++TYN  I+GL   G L EA  L  +M+ +GL 
Sbjct: 443 VGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 502

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT  ++I+       + KAR +F ++  +G+ PSV+TY  LI +Y   GR++ A   
Sbjct: 503 PDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 562

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M ++GV P+V TYN LI GL +   ++       E+   G+     TY IL+   C 
Sbjct: 563 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCN 622

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            G  ++A+ L  +M   E +   P+  T++ L+K
Sbjct: 623 LGHWQEALRLYKDMLDREIQ---PDSCTHSALLK 653



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 151/279 (54%), Gaps = 3/279 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G    V +   L+R   K G     + ++ EM  R ++ +  ++   + G  K G  +K
Sbjct: 394 HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 453

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  + E+M + G  P ++TYN+ IDG  K   +G + +A  + K M+ NG++P+ VT+ +
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHK---LGNLKEASELVKKMLYNGLVPDHVTYTS 510

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I       ++  A  VF EM S GI   VVTY  LI+   V G+L  A+    EM   G
Sbjct: 511 IIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG 570

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PNV+T NALING CK + +++A   F ++  +G+SP+  TY  LI+  C  G  ++A 
Sbjct: 571 VHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEAL 630

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +   MLDR + PD  T++ L+  L+++     VR++ N
Sbjct: 631 RLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLEN 669



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 2/145 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H  +  G       +F  L   S  +  + +   +L+ +Y    +  L    F    
Sbjct: 510 SIIHAHLMAGHLRKARAVF--LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+  +V++ N L+  L K  K +     + EM+ + I  N  ++  ++N  C  G   
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627

Query: 204 KASDIMEDMKSLGVSPKVVTYNILI 228
           +A  + +DM    + P   T++ L+
Sbjct: 628 EALRLYKDMLDREIQPDSCTHSALL 652


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 216/395 (54%), Gaps = 10/395 (2%)

Query: 134 LGFEAFKRAGD---YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           LGF AF   GD    G + S  +   L+R L  EGK  +   ++ +M     + ++ ++ 
Sbjct: 105 LGF-AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            ++NGLCK G  + A   +  M+     P VV Y+ +ID  CK     ++ +A ++F DM
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD---RQLTEALSLFSDM 220

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +  GI PN  T+++LI G C   +   A+++F  M    I    +T+N+L++ LC +G +
Sbjct: 221 LAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMV 280

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A  + D M+ S LKP+VVT N+L++G C +  + K   +FD +  +G  PSVI+Y TL
Sbjct: 281 VKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTL 340

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ YCK   M+ A  +   M  +G++PD  TYN LI GL   G +     + +E+V  G 
Sbjct: 341 INGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQ 400

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              LVTY IL   LCK+ +  +A+ LL     +E     P+I  Y++++ G C+ G+LE 
Sbjct: 401 IPDLVTYRILFDYLCKNHRLAEAMVLLK---VIEGTNLDPDIHIYSIVMDGMCRAGELEA 457

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L ++L  KGL P+  TY I+   + ++G + +
Sbjct: 458 ARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 492



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 213/409 (52%), Gaps = 22/409 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F +    G +  VL+   L+  L K G         + M++R     +  ++ +++
Sbjct: 143 ALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIID 202

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  +L +A  +  DM + G+SP   TY+ LI G C    +G   +A  +F  M+   
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI---LGHWKEAIRLFYAMIHRK 259

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+P+++TFNTL+D  CK+  +  A  V + M    +   VVTYNSL++G C+  ++ + V
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M+  G  P+V++   LING+CK ++++KA  LF+++S+QGL P  +TYNTLI   
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  GR+ DA A+ + M+  G +PD+ TY  L   L +   +     ++  +    +   +
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y+I++  +C+ G+ + A  L     K+  +   P++ TY ++I G CQ+G L +A+ L
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFS---KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496

Query: 495 LNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDIE 527
             E+ E G  PN  TY ++                 +EM+ +GF  D+ 
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 194/364 (53%), Gaps = 6/364 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL ++ +   +  V  +YK+M    I  N  + N ++N  C   +L  A  ++
Sbjct: 53  SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 112

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            D+  LG  P   T+  LI G C +G IG   +A  +F  M   G  P+ +T+ TLI+G 
Sbjct: 113 GDILKLGYQPSTATFTTLIRGLCVEGKIG---EALQLFDKMTGEGFQPDVLTYGTLINGL 169

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  N S A++    M        VV Y+++I+ LC D +L EA++L  +M+A G+ PN 
Sbjct: 170 CKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNN 229

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T ++LI+G C     ++A  LF  +  + + P  +T+NTL+DA CKEG +  A  + + 
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+   + PDV TYN L+ G      +    N+ + +V  G    +++Y  L+   CK   
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             KA+ L +E   M ++   P+ VTYN LI G C  G+L DA  L +E++  G IP+  T
Sbjct: 350 MDKAMGLFEE---MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406

Query: 510 YQIV 513
           Y+I+
Sbjct: 407 YRIL 410



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 203/400 (50%), Gaps = 23/400 (5%)

Query: 63  LLLTGRLLHSLV-VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           +L  G L++ L  V      IR    M  +N + T V       ST  DSLC++  + + 
Sbjct: 159 VLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVV-----VYSTIIDSLCKDRQLTEA 213

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L L              F      G+  +  + + L+  L   G +++   ++  M  R+
Sbjct: 214 LSL--------------FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +  +FN +++ LCK G + KA  +++ M    + P VVTYN L+DG+C +  +GK  
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
               VF  MV  G +P+ +++ TLI+G+CK + +  AM +FEEM   G+    VTYN+LI
Sbjct: 320 N---VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC  G+L +A+AL  EM+  G  P++VT   L +  CK   + +A VL   I    L 
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD 436

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P +  Y+ ++D  C+ G +E A  + + +  +G+ PDV TY  +I GL ++G +     +
Sbjct: 437 PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
             E+  NG      TYN++     ++ ++ +A+ L  EM 
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEML 536



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D   ++  M R R   ++  F+ +L  + +    +    + + M S G+     T NIL
Sbjct: 36  DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+ +C    +G  +   +V  D+++ G  P+  TF TLI G C +  I  A+++F++M  
Sbjct: 96  INSFCHLNRLGFAF---SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    V+TY +LINGLC  G    A+     M     +P VV  + +I+  CK + + +
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF D+  +G+SP+  TY++LI   C  G  ++A  +  +M+ R ++PD  T+N L+ 
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            L +EG V     +++ ++ + ++  +VTYN L+   C   +  K V++ D M    ++ 
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV---RKG 329

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             P++++Y  LI G+C+   ++ A GL  E+ ++GLIP+  TY  +   +   G + D
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 163/311 (52%), Gaps = 3/311 (0%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+ N L+ AL KEG      YV   M +  ++ ++ ++N +++G C   ++ K  ++ + 
Sbjct: 265 LTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G  P V++Y  LI+GYCK   I  M KA  +F++M + G++P+ VT+NTLI G C 
Sbjct: 325 MVRKGCVPSVISYTTLINGYCK---IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A+ +F EM  +G    +VTY  L + LC + +L EA+ L   +  + L P++  
Sbjct: 382 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 441

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + +++G C+   +E AR LF  +S +GL P V TY  +I+  C++G + +A  +   M 
Sbjct: 442 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 501

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           + G  P+  TYN +  G  R         +  E+++ G    + T  +LV  L  DG  +
Sbjct: 502 ENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQ 561

Query: 452 KAVSLLDEMFK 462
               +L E  +
Sbjct: 562 SVKQILCEFVQ 572


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + S+++   LL    +  +F++   +   M       N+  +N V+NGLCK   LN A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M+  G+    VTYN LI G    G   +   A  + +DMV+  I PN + F  L
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSG---RWTDAARLLRDMVKRKIDPNVIFFTAL 260

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+ N+  A  +++EM    +   V TYNSLING C+ G L +A  + D M++ G 
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LI GFCK K VE    LF +++ QGL     TYNTLI  YC+ G++  A  
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+D GV PD+ TYN L+  L   G +E    ++ +L  + M   ++TYNI++  LC
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +  K K+A  L      + ++   P+ + Y  +I G C+KG   +A+ L   + E G +P
Sbjct: 441 RTDKLKEAWCLFRS---LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497

Query: 506 NQTTY 510
           ++  Y
Sbjct: 498 SERIY 502



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 218/408 (53%), Gaps = 41/408 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++   ++L  + K  KF+ V Y+Y +M+   I  +L SF  +++  C+  +L+ A  ++
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT   L++G+C+     +  +A ++   M   G +PN V +NT+I+G 
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGN---RFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL-DEAVALRD---------- 318
           CK+ +++ A++VF  M   GI A  VTYN+LI+GL   G+  D A  LRD          
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254

Query: 319 ------------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                                   EM+   + PNV T N+LINGFC    +  A+ +FD 
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P V+TYNTLI  +CK  R+ED   +   M  +G++ D  TYN LI G  + G 
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   + + N +V+ G+   +VTYNIL+  LC +GK +KA+ +++++ K E +    +I+T
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD---VDIIT 431

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           YN++I+G C+  KL++A  L   L  KG+ P+   Y  +   +  KG 
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           KF+D   ++ EM + R   ++  F  VL  + K  K +    +   M++LG+S  + ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI  +C+     ++  A A+   M++ G  P+ VT  +L++GFC+      A+ + + M
Sbjct: 119 ILIHCFCR---CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VV YN++INGLC +  L+ A+ +   M   G++ + VT N LI+G       
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  L  D+ ++ + P+VI +  LID + KEG + +A  +   M+ R V+P+V TYN L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G    G +   + + + +V+ G    +VTYN L+   CK  + +  + L  EM     
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM---TY 352

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +    +  TYN LI G+CQ GKL  A  + N +++ G+ P+  TY I+ + +   G I
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 3/257 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V+    L+   VKEG   +   +YKEM RR +  N+ ++N ++NG C  G L  A 
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + + M S G  P VVTYN LI G+CK   +    K   +F +M   G++ +  T+NTLI
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK---LFCEMTYQGLVGDAFTYNTLI 366

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G+C+   ++ A KVF  M   G++  +VTYN L++ LC +GK+++A+ + +++  S + 
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +++T N +I G C+   +++A  LF  ++ +G+ P  I Y T+I   C++G   +A  +
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486

Query: 387 RNSMLDRGVLPDVSTYN 403
              M + G +P    Y+
Sbjct: 487 CRRMKEDGFMPSERIYD 503



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 57/302 (18%)

Query: 49  YFCWSTKELRA---SHSLLLTG-----------RLLHSLVVAKKYPKIRSF---LHMFVK 91
           ++C   K +RA   +++ L++G           RLL  +V  K  P +  F   +  FVK
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266

Query: 92  NGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
            G       ++  +   S   +    NS+I    +   + + K        K     G  
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK-----GCF 321

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
             V++ N L+    K  + ED   ++ EM  + +  +  ++N +++G C+AGKLN A  +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------------- 237
              M   GVSP +VTYNIL+D  C  G I                               
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441

Query: 238 -GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             K+ +A  +F+ +   G+ P+ + + T+I G C+      A K+   M   G       
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501

Query: 297 YN 298
           Y+
Sbjct: 502 YD 503


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/425 (34%), Positives = 211/425 (49%), Gaps = 58/425 (13%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C+ LL AL KEG  E  E V K+     +      FN ++NG C+ G +NKA   +E M
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM 418

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF--- 269
           +++G+ P  VTYN L+  +C+   +  M +A+   K MVE G+LPN  T+NTLIDG+   
Sbjct: 419 EAVGLRPNHVTYNSLVKKFCE---MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 270 --------------------------------CKDENISAAMKVFEEMGSHGIAAGVVTY 297
                                           CKD NI  A  +  +M   G+      Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N LI+G C+ GKL +A    DEM+A  + P +VT N LING CKK  V +A  L  +I+ 
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +GLS  VITYN+LI  Y   G ++ A  +  +M   G+ P ++TY+ LIAG  +EG V  
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL- 654

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
           V  I  E++   +    V YN L+    + G  +KA SL      ME +   P+ +TYN 
Sbjct: 655 VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS---AMEAQGIQPDKMTYNC 711

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKG 521
           LI G  ++G++     L+N++  +GLIP   TY I+                  EM E G
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771

Query: 522 FIPDI 526
           F P +
Sbjct: 772 FTPSV 776



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 208/400 (52%), Gaps = 41/400 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V   N ++  L KE + +D E ++ EM  RR+  N  ++N +++G CK G+L +A
Sbjct: 212 GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA 271

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I E MK   V P ++T+N L++G C+      M +A  V ++M   G +P+  T+ TL
Sbjct: 272 FNIRERMKVENVEPTIITFNSLLNGLCRA---QMMEEAQRVLEEMEVYGFVPDRFTYTTL 328

Query: 266 IDG-----------------------------------FCKDENISAAMKVFEEMGSHGI 290
            DG                                    CK+ N+  A +V ++   +G+
Sbjct: 329 FDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGL 388

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A   V +N+++NG C  G +++A    ++M A GL+PN VT N+L+  FC+ K +E+A  
Sbjct: 389 APVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEK 448

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
               + E+G+ P+V TYNTLID Y +    +  F +   M  +G+ P+V +Y CLI  L 
Sbjct: 449 CIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLC 508

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           ++ N+     I+ ++V+ G+      YN+L+   C  GK K A    DEM   E     P
Sbjct: 509 KDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE---IVP 565

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +VTYN+LI G C+KGK+ +A  L +E+  KGL  +  TY
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 215/434 (49%), Gaps = 50/434 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D  +  + ++ N L+    K G+ E+   + + MK   +E  + +FN +LNGLC+
Sbjct: 240 FDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCR 299

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
           A  + +A  ++E+M+  G  P   TY  L DG+ K G +                     
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYT 359

Query: 238 -----------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                      G M KA+ V K  +ENG+ P  V FNT+++G+C+  +I+ A    E+M 
Sbjct: 360 CSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKME 419

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G+    VTYNSL+   C    ++EA     +M+  G+ PNV T N LI+G+ +  L +
Sbjct: 420 AVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFD 479

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +   + +++ ++GL P+VI+Y  LI+  CK+  + +A  +   M+ RGV+P+   YN LI
Sbjct: 480 RCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI 539

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G    G ++      +E+V   +   LVTYNIL+  LCK GK  +A +L  E   + ++
Sbjct: 540 DGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE---ITRK 596

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY---------------Q 511
               +++TYN LI G+   G ++ A  L   + + G+ P   TY               +
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE 656

Query: 512 IVREEMMEKGFIPD 525
            + +EM++   +PD
Sbjct: 657 KIYQEMLQMNLVPD 670



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 254/576 (44%), Gaps = 67/576 (11%)

Query: 1   PFCSANSTIE--------------DITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLI 46
           PFCS     E               + E  R+ H  KL+       +LQ   ++    LI
Sbjct: 30  PFCSLTEKQEPTSTTNNSTTNLQGQVQEQARHEHVQKLQT------LLQQGRTETARRLI 83

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
                  +     SH  L T   L SL      P     L       K  S S   + L 
Sbjct: 84  RSMLLPKSPFSSPSH--LYT---LFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLM 138

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
              D +  +   +++ + + V   +     + F    + GL+       + ++A VK G 
Sbjct: 139 K-KDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            +    +   MKR  +   +  +N V+ GLCK  ++  A  + ++M    V+P  +TYN 
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LIDGYCK   +G++ +A  + + M    + P  +TFN+L++G C+ + +  A +V EEM 
Sbjct: 258 LIDGYCK---VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 287 SHGIAAGVVTYNS-----------------------------------LINGLCVDGKLD 311
            +G      TY +                                   L+N LC +G ++
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  +  + + +GL P  V  N ++NG+C+   + KA    + +   GL P+ +TYN+L+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             +C+   ME+A      M+++GVLP+V TYN LI G  R    +    I+ E+   G++
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +++Y  L+  LCKD    +A  +L +M         PN   YN+LI G C  GKL+DA
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMV---HRGVVPNAQIYNMLIDGSCIAGKLKDA 551

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               +E++ + ++P   TY I+   + +KG + + E
Sbjct: 552 FRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 201/391 (51%), Gaps = 40/391 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ + ++ N L++   +    E+ E   K+M  + +  N++++N +++G  ++   ++ 
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I+E+M+  G+ P V++Y  LI+  CK   I    +A+ +  DMV  G++PN   +N L
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANI---LEAEVILGDMVHRGVVPNAQIYNML 538

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG C    +  A + F+EM +  I   +VTYN LINGLC  GK+ EA  L  E+   GL
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV--------------------- 364
             +V+T N+LI+G+     V+KA  L++ + + G+ P++                     
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI 658

Query: 365 -------------ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
                        + YN LI  Y + G ++ A ++ ++M  +G+ PD  TYNCLI G  +
Sbjct: 659 YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           EG +  V+N++N++   G+     TY+IL+   CK      A     EMF+       P+
Sbjct: 719 EGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFE---NGFTPS 775

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +   + LI G  ++G+  DA+ + +E+  KG
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 169/325 (52%), Gaps = 4/325 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+  +     GLK +V+S   L+  L K+    + E +  +M  R +  N   +N +++G
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            C AGKL  A    ++M +  + P +VTYNILI+G CKKG   K+ +A+ +  ++   G+
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG---KVMEAENLASEITRKGL 598

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             + +T+N+LI G+    N+  A++++E M   GI   + TY+ LI G   +G L     
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEK 657

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  EM+   L P+ V  NALI+ + +   V+KA  L   +  QG+ P  +TYN LI  + 
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           KEGRM     + N M  RG++P   TY+ LI G  +  + +G      E+  NG    + 
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
             + L+  L ++G+S  A  +  EM
Sbjct: 778 ICDNLITGLREEGRSHDADVICSEM 802


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 277/620 (44%), Gaps = 108/620 (17%)

Query: 3   CSANSTIEDITEL---------IRNHHWSKLKN-----------TDPNTVILQLFNSDAD 42
           C+ N+ I  ++E          I+   W+  KN           TDP+  I  L +    
Sbjct: 39  CTLNNAIATLSETHYRDLIFDTIKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIR 98

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P + LR+F W   +     S  +   +L  LV           +   V       V  + 
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLI 158

Query: 103 HALSTC---SDSLCRNSIIIDML-------------MLAYVKNMKPHLGFEAFKRAGDYG 146
                C    D + RN ++ D+              +L+  KN+        +     +G
Sbjct: 159 AGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNV--------YGMMEQFG 210

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V++ N +L +  KEG+ +    +  EM+ R    N  ++N ++NGL K G+L +A 
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAK 270

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKG-----------------------------GI 237
            ++E+M + G++    TYN LI+G+C+KG                             G+
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 238 GKMYKADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
            K  +   V   F DM+++   P+ V+FN+L+ G+C+   IS A  +F+E+    +   V
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LI+GLC+ G LD A+ L+ EM   GL P++ T   L+NG  K   V  AR  F++
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +GL P    YNT I    K      AF+M+  ML  G  PDV TYN  +  L ++GN
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------- 460
            E   +++  +V++G+    VTY  ++    K+G  +KA  + +EM              
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 461 -----------------FKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                            F    EK  P N++TYN +I G C   ++++A    +E+ EKG
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 503 LIPNQTTYQIVREEMMEKGF 522
           ++PN+ +Y I+  E    G+
Sbjct: 631 ILPNKFSYTILINESCNMGY 650



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 230/502 (45%), Gaps = 62/502 (12%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST------IFHALSTCSD 110
           +RAS +++    +       ++     SFLH    N    ++S       IF  +     
Sbjct: 7   VRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDTIKEKPW 66

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           + C+N+ + D           PHL          + ++       +  R ++ +  F++ 
Sbjct: 67  AFCKNNWVSDQFGAVITD---PHLFIRVL-----HSMRIRPRVALRFFRWVMAQPDFKES 118

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           E+V               F  +L+ L     ++ A  +ME + S  +   V   ++LI G
Sbjct: 119 EFV---------------FCAILDILVGNDLMHAAYWVMERVVSFEMHGVV---DVLIAG 160

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI-SAAMKVFEEMGSHG 289
           +              VF  M+ NG+LP+    N ++    +DEN+ S A  V+  M   G
Sbjct: 161 HVX---------CLLVFDKMIRNGLLPDVKNCNRILRVL-RDENLLSKAKNVYGMMEQFG 210

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   VVTYN++++  C +G++D+A+ L  EM   G  PN VT N L+NG  KK  +E+A+
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAK 270

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L +++   GL+ S  TYN LI+ +C++G   +AF +   M++R   P +STYN L+ GL
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +   V GVR   ++++ +     +V++N L+   C+ G   +A  L DE   ++     
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE---LKCRDLV 387

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---------------- 513
           P ++TYN LI G C  G L+ A  L  E+ ++GL P+  TY I+                
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447

Query: 514 REEMMEKGFIPDIEGHMYNISG 535
             EM+ KG  PD   +   I G
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVG 469



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++S N LL    + G   +   ++ E+K R +   + ++N +++GLC  G L+ A  + +
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+ P + TY IL++G C K G   M  A   F +M+  G+ P+   +NT I G  
Sbjct: 415 EMTDQGLFPDIFTYTILVNG-CFKLGYVSM--ARGFFNEMLSKGLKPDRFAYNTRIVGEM 471

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K  + S A  + EEM + G    V+TYN  ++ LC  G  +EA  L + M++ GL P+ V
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T  ++INGF K   + KAR +F+++  +G++PSV+TY  LI A+  +  ++ AF   + M
Sbjct: 532 TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L++ V  +V TYN +I GL     ++      +E+   G+     +Y IL+   C  G  
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++A+ L  EM      K  P+  T++V +K
Sbjct: 652 EEALRLYREML---DRKIQPDSFTHSVFLK 678



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 157/301 (52%), Gaps = 19/301 (6%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA  V+  M + GI P  VT+NT++D +CK+  +  A+++  EM   G     VTYN L+
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NGL   G+L++A  L +EM+ SGL  +  T N LINGFC+K L  +A  L +++  +   
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P++ TYNTL+   CK  ++       + ML     PD+ ++N L+ G  R G +     +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +EL    +   ++TYN L+  LC  G    A+ L  E   M  +  +P+I TY +L+ G
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE---MTDQGLFPDIFTYTILVNG 434

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
             + G +  A G  NE+L KGL P++  Y                  ++EEM+  GF PD
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 526 I 526
           +
Sbjct: 495 V 495



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 68  RLLHSLVVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIII 119
           RL  S ++  K+ P I SF   L+ + + G  +    +F  L  C D     +  N++I 
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK-CRDLVPTVITYNTLIH 398

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            + M  Y+            K   D GL   + +   L+    K G        + EM  
Sbjct: 399 GLCMWGYLDA-----ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + ++ +  ++N  + G  K    + A  + E+M + G  P V+TYN+ +   C++G   +
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  + ++MV +G++P+ VT+ ++I+GF K+ ++  A +VF EM S G+A  VVTY  
Sbjct: 514 ---ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+       LD A     +M+   +  NV+T NA+ING C  + +++A   FD++ E+G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P+  +Y  LI+  C  G  E+A  +   MLDR + PD  T++  +  L R+  V  V+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690

Query: 420 NI 421
            +
Sbjct: 691 CV 692


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 228/429 (53%), Gaps = 21/429 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK-RAGDYGLKSSVLSCNQLLRALVK 163
           LS  + S   N +I  +L   +V+ +      EA +    + G+  ++++ N ++  L+K
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKV------EALQMEMENEGIMPTLVTYNAIIHGLLK 361

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             + E  +  + EM+   +  +L ++N +LNG CKAG L +A  ++ D++  G++P V+T
Sbjct: 362 SEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLT 421

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LIDGYC+ GG+ +   A  + ++MVE G  P+  T+  L++G  K  N+  A + F+
Sbjct: 422 YNTLIDGYCRLGGLEE---ARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM S G+      YN+ I    + G   +A  LR+ MM  G+ P+ VT N +I+G CK  
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            ++ A+ L   +   GL P  ITY  LI A+C+ G + +A  + N M+  G+ P V TY 
Sbjct: 539 NLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYT 598

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI    R GN+        ++++ G+    +TYN+L+ ALC+ G++  A     EM   
Sbjct: 599 ILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML-- 656

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            +    PN  TY +LI G C++G   DA  L  E+ + G+ P+  T+       + KGF 
Sbjct: 657 -ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHN-----ALFKGF- 709

Query: 524 PDIEGHMYN 532
              +GHMY+
Sbjct: 710 --DKGHMYH 716



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 234/476 (49%), Gaps = 87/476 (18%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF+    +G+   V  CN +LR L    +++DV  VY+EM +  IE  + ++N +L
Sbjct: 191 LCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLL 250

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKV--VTYNILIDGYCKKGGI-------------- 237
           +   K G+ ++AS ++++M++ G    +  VTYN++I    ++G +              
Sbjct: 251 DSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK 310

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G + K +A+  +M   GI+P  VT+N +I G  K E + AA  
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM + G+   ++TYNS++NG C  G L EA+ L  ++  +GL P V+T N LI+G+C
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 341 -----------KKKLVEK------------------------ARVLFDDISEQGLSPSVI 365
                      K+++VE+                        AR  FD++  +GL P   
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNT I A    G    AF +R  M+ +G+ PD  TYN +I GL + GN++  +++  ++
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V++G++   +TY  L+ A C+ G   +A  LL+ M     +   P++VTY +LI   C++
Sbjct: 551 VSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV---SDGLQPSVVTYTILIHTCCRR 607

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           G L  A G   ++L+ G+ PN+ TY ++                  EM+E+G  P+
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPN 663


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 198/383 (51%), Gaps = 6/383 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK  G+ GL ++ ++ + L+ +  + G+ ++      +M +  IE  +  +N ++NG CK
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK 274

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G  + A    ++M   G++P VVTY  LI GYC +G   + +KA  V+ +M   GI PN
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEG---EWHKAFKVYNEMTAKGISPN 331

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             TF  +I G C+   ++ A+++F EM    I    VTYN +I G C  G + EA  L D
Sbjct: 332 TYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G  P+  T   LI+G C    V +A+   DD+ +     + + Y+ L+  YCKEG
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R +DA +    M++RGV  D+  Y  LI G +RE +   +  ++ E+ N+G+R   V Y 
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYT 511

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++    K G  K+A  L D M     E   PN+VTY  LI G C+ G ++ A  L  E 
Sbjct: 512 NMIDRHSKAGNLKEAFGLWDIMV---DEGCLPNVVTYTALINGLCKAGLMDKAELLSKET 568

Query: 499 LEKGLIPNQTTYQIVREEMMEKG 521
           L   + PN  TY    + +   G
Sbjct: 569 LVSDVTPNHITYGCFLDHLTRGG 591



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 232/496 (46%), Gaps = 64/496 (12%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN--MKPHLGFEAFKRAGDYGLKSS 150
           GKF     +F  +      LC N I   +L+ ++ +   M   +GF    +     ++ +
Sbjct: 206 GKFNEAELLFKEMG--EKGLCANHITYSILIDSFCRRGEMDNAIGF--LDKMTKASIEFT 261

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V   N L+    K G     +Y + EM  + +   + ++  +++G C  G+ +KA  +  
Sbjct: 262 VYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYN 321

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M + G+SP   T+  +I G C+      M +A  +F +M E  I+P+EVT+N +I+G C
Sbjct: 322 EMTAKGISPNTYTFTAIISGLCRAN---MMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +  NIS A  + +EM   G      TY  LI+GLC  G++ EA    D++     K N +
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 331 TSNALINGFCK-----------KKLVEKA---------------------RVLFDDISE- 357
             +AL++G+CK           + +VE+                      R LF  + E 
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498

Query: 358 --QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              GL P  + Y  +ID + K G +++AF + + M+D G LP+V TY  LI GL + G +
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLM 558

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    +  E + + +    +TY   +  L + G  +KAV L   M K          V+Y
Sbjct: 559 DKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK----GFLATTVSY 614

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------------MME 519
           N+LI+GFC+ GK+E+A  LL+ + +  ++P+  TY  +  E                M++
Sbjct: 615 NILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLD 674

Query: 520 KGFIPDIEGHMYNISG 535
           KG  PD   + + + G
Sbjct: 675 KGLKPDTLAYSFLVHG 690



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 198/393 (50%), Gaps = 26/393 (6%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  L   V + + LL  L++  +F DV  ++ ++    ++ ++  ++ V+  LC+    N
Sbjct: 89  DCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFN 148

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-----------------------GKM 240
           KA +++  M+       +V YN+LI G CK   I                       GK 
Sbjct: 149 KAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKF 208

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +A+ +FK+M E G+  N +T++ LID FC+   +  A+   ++M    I   V  YNSL
Sbjct: 209 NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSL 268

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ING C  G    A    DEM+  GL P VVT  +LI+G+C +    KA  ++++++ +G+
Sbjct: 269 INGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI 328

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           SP+  T+  +I   C+   M +A  +   M +R ++P   TYN +I G  R GN+    +
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFH 388

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +++E+V  G      TY  L+  LC  G+  +A   +D+   + K+    N + Y+ L+ 
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD---LHKDHHKLNNMCYSALVH 445

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           G+C++G+ +DA      ++E+G+  +   Y I+
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL 478



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 198/382 (51%), Gaps = 32/382 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA--------------- 199
           + ++R+L +   F   + +   M+  + +L++  +N +++GLCK+               
Sbjct: 135 SAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQ 194

Query: 200 -----------GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
                      GK N+A  + ++M   G+    +TY+ILID +C++G   +M  A     
Sbjct: 195 KGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRG---EMDNAIGFLD 251

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M +  I      +N+LI+G+CK  N SAA   F+EM   G+   VVTY SLI+G C +G
Sbjct: 252 KMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEG 311

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +  +A  + +EM A G+ PN  T  A+I+G C+  ++ +A  LF ++ E+ + PS +TYN
Sbjct: 312 EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYN 371

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +I+ +C+ G + +AF + + M+ +G +PD  TY  LI+GL   G V   +  +++L  +
Sbjct: 372 VMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKD 431

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
             +   + Y+ LV   CK+G+ K AVS    M +        ++V Y +LI G  ++   
Sbjct: 432 HHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAM---DLVCYAILIDGTAREHDT 488

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
               GLL E+   GL P+   Y
Sbjct: 489 RALFGLLKEMHNHGLRPDAVIY 510



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 36/420 (8%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y    + H  F+ +      G+  +  +   ++  L +     +   ++ EMK R+
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM- 240
           I  +  ++N ++ G C++G +++A  ++++M   G  P   TY  LI G C  G + +  
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422

Query: 241 ------------------------YKADAVFKD-------MVENGILPNEVTFNTLIDGF 269
                                   Y  +  FKD       MVE G+  + V +  LIDG 
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            ++ +  A   + +EM +HG+    V Y ++I+     G L EA  L D M+  G  PNV
Sbjct: 483 AREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNV 542

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT  ALING CK  L++KA +L  +     ++P+ ITY   +D   + G ME A  + ++
Sbjct: 543 VTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHA 602

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML +G L    +YN LI G  R G +E    +++ + +N +    +TY+ ++   CK   
Sbjct: 603 ML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSN 661

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A+ L   M  ++K  K P+ + Y+ L+ G C  G+LE A  L +E++ +G+  N  T
Sbjct: 662 LQEAIKLWHTM--LDKGLK-PDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 169/340 (49%), Gaps = 31/340 (9%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK   + P+V T + L++G  +     +      +F D+V   + P+   ++ ++   C+
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLR---FRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCE 143

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            ++ + A ++   M  +     +V YN LI+GLC   ++ EA+ +++ +M  GL+ NVVT
Sbjct: 144 LKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT 203

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
                N         +A +LF ++ E+GL  + ITY+ LID++C+ G M++A    + M 
Sbjct: 204 YYGKFN---------EAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMT 254

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
              +   V  YN LI G  + GN    +   +E+++ G+   +VTY  L+   C +G+  
Sbjct: 255 KASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWH 314

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           KA  + +E   M  +   PN  T+  +I G C+   + +A  L  E+ E+ ++P++ TY 
Sbjct: 315 KAFKVYNE---MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYN 371

Query: 512 IVRE----------------EMMEKGFIPDIEGHMYNISG 535
           ++ E                EM+ KGF+PD   +   ISG
Sbjct: 372 VMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISG 411



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 49/290 (16%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV-----KNMKPHLGFEA 138
           + +H + K G+F        A+S C   +    + +D++  A +     +       F  
Sbjct: 442 ALVHGYCKEGRFKD------AVSACR-VMVERGVAMDLVCYAILIDGTAREHDTRALFGL 494

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K   ++GL+   +    ++    K G  ++   ++  M       N+ ++  ++NGLCK
Sbjct: 495 LKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCK 554

Query: 199 AGKLNKA---------SDI-------------------MEDMKSL------GVSPKVVTY 224
           AG ++KA         SD+                   ME    L      G     V+Y
Sbjct: 555 AGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSY 614

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           NILI G+C+   +GK+ +A  +   M +N ILP+ +T++T+I   CK  N+  A+K++  
Sbjct: 615 NILIRGFCR---LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHT 671

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           M   G+    + Y+ L++G C+ G+L++A  LRDEM+  G++ N VT  +
Sbjct: 672 MLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 22/214 (10%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK    +A  D  ++  LKP+ V    ++      +L++   ++          P V T 
Sbjct: 50  GKQSWRIAFNDPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLM----------PEVRTL 99

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + L++   +  R  D   + + ++   V PD+  Y+ ++  L    +    + +++ +  
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEF 159

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           N  +  +V YN+L+  LCK  +  +A+ + + + +   E    N+VTY          GK
Sbjct: 160 NQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLE---ANVVTY---------YGK 207

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             +A  L  E+ EKGL  N  TY I+ +    +G
Sbjct: 208 FNEAELLFKEMGEKGLCANHITYSILIDSFCRRG 241


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 222/413 (53%), Gaps = 47/413 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R   YG+  S  SCN +L  L      ++   +++E+     E N  S+N +L  LC AG
Sbjct: 216 RLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAG 267

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------- 237
           ++  A  + ++M S    P VVTY I++ GYC    +                       
Sbjct: 268 RIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 238 ---------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                    G++  A  V +DMV +G++ +   F T++ GFC+  +++AA   F+EM   
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+AA  VTY +LINGLC  G+L EA  +  EM   GL  + VT   LI+G+CK   + +A
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            ++ + + ++ ++P+V+TY  L D  CK+G +  A  + + M  +G+  ++ TYN LI G
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + GN+E     M ++   G++  + TY  ++GALC+  +  +A SLL EM  ++K  K
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM--LDKGIK 562

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVREEMMEK 520
            P IVTYNVL+ GFC  G++E    LL  +LEK + PN TTY  ++++  +EK
Sbjct: 563 -PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 197/354 (55%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    ++G        + EM++R +  +  ++  ++NGLC+AG+L +A  ++++M+  G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +    VTY +LIDGYCK   +GKM +A  V   MV+  + PN VT+  L DG CK  ++ 
Sbjct: 421 LDVDAVTYTVLIDGYCK---VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA ++  EM S G+   + TYNSLINGLC  G L++A+    +M  +GLKP+V T   +I
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C+ K +++A  L  ++ ++G+ P+++TYN L++ +C  GR+E    +   ML++ + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+     E N++    I   +++  +     TYNIL+   CK    K+A+  
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             EM  +EK  +     +YN LI+   +K K  +A  L  ++ ++ L      Y
Sbjct: 658 HSEM--IEKGFRL-TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ + ++   ++  L  EG+  D   V ++M    + L+   F  V++G C+ G L  A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +  ++M+  G++   VTY  LI+G C+    G++ +A+ V ++M + G+  + VT+  L
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRA---GELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK   ++ A  V  +M    +   VVTY +L +GLC  G +  A  L  EM + GL
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N+ T N+LING CK   +E+A     D+ E GL P V TY T+I A C+   ++ A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLD+G+ P + TYN L+ G    G VEG + ++  ++   +     TYN L+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +   K    +   M   E     PN  TYN+LIKG C+   +++A    +E++EKG   
Sbjct: 612 IEKNMKSTTEIYKGMLSQE---VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 506 NQTTY 510
             ++Y
Sbjct: 669 TASSY 673



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      GL +  ++   L+  L + G+ ++ E V +EM+ + ++++  ++  +++G CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK+ +A  +   M    V+P VVTY  L DG CK+G +     A+ +  +M   G+  N
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC---AANELLHEMCSKGLELN 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N+LI+G CK  N+  AM+   +M   G+   V TY ++I  LC   +LD A +L  
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP +VT N L+NGFC    VE  + L + + E+ + P+  TYN+L+  YC E 
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+    +   ML + V+P+ +TYN LI G  +  N++      +E++  G R    +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L K  K  +A  L +   KM KE+       YN  I     +  LE    L +EL
Sbjct: 675 ALIRLLNKKKKFTEARRLFE---KMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731

Query: 499 LEKGLI 504
           +E  L+
Sbjct: 732 VEVTLV 737



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 38/356 (10%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           D  +F L  LC       ++ ++  ++  G+SP   + N ++   C+      + +A  +
Sbjct: 197 DPVSFDLLLLCL-----PSAPLLLRLRQYGISPSPESCNAVL---CRL----PLDEAVQL 244

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+++ E     N  ++N L+   C    I  A ++F+EM S      VVTY  +++G C 
Sbjct: 245 FQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +L+ A+ L  EM A GL+ N V   ++I   C +  V  A  + +D+   G+      
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + T++  +C++G +  A    + M  RG+  D  TY  LI GL R G ++    ++ E+ 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+    VTY +L+   CK GK  +A  + +   KM +++  PN+VTY  L  G C++G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN---KMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 487 KLEDANGLLNELLEKGLIPNQTTY--------------QIVRE--EMMEKGFIPDI 526
            +  AN LL+E+  KGL  N  TY              Q +R   +M E G  PD+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 3/312 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++   +L+  Y K  K    F    +     +  +V++   L   L K+G       + 
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +ELN+ ++N ++NGLCKAG L +A   M DM   G+ P V TY  +I   C+ 
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++ +A ++ ++M++ GI P  VT+N L++GFC    +    ++ E M    I    
Sbjct: 544 ---KELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C++  +     +   M++  + PN  T N LI G CK + +++A     +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G   +  +YN LI    K+ +  +A  +   M    +  +   YN  I     E N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDN 720

Query: 415 VEGVRNIMNELV 426
           +E    + +ELV
Sbjct: 721 LESTLALCDELV 732



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 44/328 (13%)

Query: 69  LLHSLVVAKKY-PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           L+H+ +V K+  P + ++  +     K G   + + + H +  CS  L  N    + L+ 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM--CSKGLELNIFTYNSLIN 503

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
              K               + GLK  V +   ++ AL +  + +    + +EM  + I+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + ++N ++NG C +G++     ++E M    + P   TYN L+  YC +     M    
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN---MKSTT 620

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++K M+   ++PNE T+N LI G CK  N+  A+    EM   G      +YN+LI   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR-- 678

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
                                         L+N   KKK   +AR LF+ + ++ L+   
Sbjct: 679 ------------------------------LLN---KKKKFTEARRLFEKMRKERLTAEP 705

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             YN  ID    E  +E   A+ + +++
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 32/226 (14%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+  + NA++   C+  L E  + LF ++ E+    +  +YN L+ A C  GR++DA
Sbjct: 221 GISPSPESCNAVL---CRLPLDEAVQ-LFQELPEK----NTCSYNILLKALCTAGRIKDA 272

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PDV TY  ++ G      +E    +++E+   G+    V Y  ++  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC +G+   AV ++++M          +   +  ++ GFC+KG L  A    +E+ ++GL
Sbjct: 330 LCDEGQVSDAVRVVEDMVM---HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 504 IPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNI 533
             +  TY                + V +EM +KG   D++   Y +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTV 430


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 257/516 (49%), Gaps = 54/516 (10%)

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTC 108
           T  + A+H+L       H ++ +   P + SF H+     K    S +F       LS  
Sbjct: 45  TGNVTATHAL----HFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S   C  +I+++ L    V  ++   GF AF      G   ++++ N L++ L  E +  
Sbjct: 101 SSDRCTLNILLNCL--CNVNRLRE--GFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM------KSLGVSPKVV 222
           +   ++  M++     ++ ++  ++ GLC  G +N A  + ++M        +   P V+
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYNI++DG CK   +G+  +A  +F++M   G++P+ +++N+LI GFC       + ++ 
Sbjct: 217 TYNIIVDGLCK---VGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   G+   +VT+N LI+ LC +GK+ EA  L   M+ SG+ P++VT N+LI GFC  
Sbjct: 274 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +  AR LF  +  +G  P VI+YN LI+ Y K  ++E+A  + N ML  G  P+V TY
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-- 460
           + L+ G+   G V+  + + + +  +G+     TY I +  LCK+    +A+ L  E+  
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453

Query: 461 --FKME----------------KEKKW------------PNIVTYNVLIKGFCQKGKLED 490
             FK+E                 E  W            PN+VTY ++I GFC++G+++ 
Sbjct: 454 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 513

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           AN L+ ++   G  P+  TY  +     E   + ++
Sbjct: 514 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 549



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 214/366 (58%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V++ N ++  L K G+ ++ + +++EMK + +  ++ S+N +++G C AGK  ++  
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++++M   G+ P +VT+N+LID  CK+G   K+ +A  +   M+E+GI+P+ VT+N+LI+
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEG---KVIEAKKLLGVMIESGIVPDLVTYNSLIE 328

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC   ++++A ++F  M S G    V++YN LING     K++EA+ L +EM+  G +P
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 388

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NV+T ++L+ G      V+ A+ LF  +   G++ +  TY   +D  CK   + +A  + 
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF 448

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             +       ++   NCLI GL + G +E    +  +L N G    +VTY I++   C++
Sbjct: 449 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 508

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+  KA  L+    KME     P+I+TYN L++GF +  KLE+   LL+ + +K + P+ 
Sbjct: 509 GQVDKANVLIQ---KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDA 565

Query: 508 TTYQIV 513
            T  IV
Sbjct: 566 ITCSIV 571



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 174/322 (54%), Gaps = 4/322 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL+  +++ N L+  L KEGK  + + +   M    I  +L ++N ++ G C  G LN
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++   M S G  P V++YN+LI+GY K     K+ +A  ++ +M+  G  PN +T++
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTL---KVEEAMKLYNEMLLVGKRPNVITYD 394

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +L+ G      +  A K+F  M +HGIA    TY   ++GLC +  L EA+ L  E+ +S
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             K  +   N LI+G CK   +E A  LF+ +S +G  P+V+TY  +I  +C+EG+++ A
Sbjct: 455 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M   G  PD+ TYN L+ G      +E V  +++ +    +    +T +I+V  
Sbjct: 515 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDM 574

Query: 444 LCKDGKSKKAVSLLDEMFKMEK 465
           L KD K ++ + LL   F ++K
Sbjct: 575 LSKDEKYQECLHLLPR-FPIQK 595



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 82/152 (53%), Gaps = 10/152 (6%)

Query: 136 FEAFK-----RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           FEA K     ++ ++ L+   L+C  L+  L K GK E    +++++     E N+ ++ 
Sbjct: 442 FEAMKLFTELKSSNFKLEIENLNC--LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++G C+ G+++KA+ +++ M++ G +P ++TYN L+ G+ +     K+ +   +   M
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES---NKLEEVVQLLHRM 556

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            +  + P+ +T + ++D   KDE     + + 
Sbjct: 557 AQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            G + S+++   LL    +  +F++   +   M       N+  +N V+NGLCK   LN A
Sbjct: 669  GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++   M+  G+    VTYN LI G    G   +   A  + +DMV+  I PN + F  L
Sbjct: 729  LEVFYCMEKKGIRADAVTYNTLISGLSNSG---RWTDAARLLRDMVKRKIDPNVIFFTAL 785

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            ID F K+ N+  A  +++EM    +   V TYNSLING C+ G L +A  + D M++ G 
Sbjct: 786  IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             P+VVT N LI GFCK K VE    LF +++ QGL     TYNTLI  YC+ G++  A  
Sbjct: 846  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            + N M+D GV PD+ TYN L+  L   G +E    ++ +L  + M   ++TYNI++  LC
Sbjct: 906  VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 446  KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +  K K+A  L      + ++   P+ + Y  +I G C+KG   +A+ L   + E G +P
Sbjct: 966  RTDKLKEAWCLFRS---LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022

Query: 506  NQTTY 510
            ++  Y
Sbjct: 1023 SERIY 1027



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 218/408 (53%), Gaps = 41/408 (10%)

Query: 150  SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
            S++   ++L  + K  KF+ V Y+Y +M+   I  +L SF  +++  C+  +L+ A  ++
Sbjct: 603  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 210  EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
              M  LG  P +VT   L++G+C+     +  +A ++   M   G +PN V +NT+I+G 
Sbjct: 663  GKMMKLGFRPSIVTLGSLLNGFCQGN---RFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 719

Query: 270  CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL-DEAVALRD---------- 318
            CK+ +++ A++VF  M   GI A  VTYN+LI+GL   G+  D A  LRD          
Sbjct: 720  CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 779

Query: 319  ------------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                                    EM+   + PNV T N+LINGFC    +  A+ +FD 
Sbjct: 780  IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 839

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            +  +G  P V+TYNTLI  +CK  R+ED   +   M  +G++ D  TYN LI G  + G 
Sbjct: 840  MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899

Query: 415  VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +   + + N +V+ G+   +VTYNIL+  LC +GK +KA+ +++++ K E +    +I+T
Sbjct: 900  LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD---VDIIT 956

Query: 475  YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            YN++I+G C+  KL++A  L   L  KG+ P+   Y  +   +  KG 
Sbjct: 957  YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 15/441 (3%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTCSDSLCRNSIIIDMLM 123
           L   +V ++  P I  F  +           T+ +      L   S  L   +I+I    
Sbjct: 58  LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH--- 114

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +         +    G + S+++   LL       +  D   +   M +   E
Sbjct: 115 -CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+  +N +++GLCK G+LN A +++ +M+  G+   VVTYN L+ G C  G   +   A
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG---RWSDA 230

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + +DM++  I P+ VTF  LID F K  N+  A ++++EM    +    VTYNS+ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+ G+L +A    D M + G  PNVVT N LI+GFCK ++V++   LF  +S +G +  
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           + TYNTLI  YC+ G++  A  +   M+ R V PD+ T+  L+ GL   G +E      +
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  +    G+V YNI++  LCK  K +KA  L     ++  E   P+  TY ++I G C
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF---CRLPVEGVKPDARTYTIMILGLC 467

Query: 484 QKGKLEDANGLLNELLEKGLI 504
           + G   +A+ L+  + E+G+I
Sbjct: 468 KNGPRREADELIRRMKEEGII 488



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 203/396 (51%), Gaps = 35/396 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++   +LL A     ++E V Y  ++M+   I  +L SF  +++  C+  +L+ A  ++
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L+ G+C    IG  +    +   MV++G  PN V +NTLIDG 
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGL 186

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  ++ A+++  EM   G+ A VVTYN+L+ GLC  G+  +A  +  +MM   + P+V
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT  ALI+ F K+  +++A+ L+ ++ +  + P+ +TYN++I+  C  GR+ DA    + 
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +G  P+V TYN LI+G  +   V+    +   +   G  A + TYN L+   C+ GK
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366

Query: 450 SKKAVSLLDEMFK--------------------------------MEKEKKWPNIVTYNV 477
            + A+ +   M                                  M + +K+  IV YN+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +I G C+  K+E A  L   L  +G+ P+  TY I+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 215/453 (47%), Gaps = 40/453 (8%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           S++  G LLH   +  +     S + + VK+G   +V       +T  D LC+N      
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV----VYNTLIDGLCKNG----- 190

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
                    + ++  E        GL + V++ N LL  L   G++ D   + ++M +R 
Sbjct: 191 ---------ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  ++ +F  +++   K G L++A ++ ++M    V P  VTYN +I+G C     G++Y
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH---GRLY 298

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A   F  M   G  PN VT+NTLI GFCK   +   MK+F+ M   G  A + TYN+LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GKL  A+ +   M++  + P+++T   L++G C    +E A V FDD+ E    
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             ++ YN +I   CK  ++E A+ +   +   GV PD  TY  +I GL + G     R  
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP----RRE 474

Query: 422 MNELVNNGMRAGLV-TYNILVGALCKDGKSKKAVSL-LDEMFKMEKEKK-WPN---IVTY 475
            +EL+      G++   N     L +   S K +SL L E+++  K    W      + +
Sbjct: 475 ADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAF 534

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +  +KGF ++  L         LLE+G  P  +
Sbjct: 535 SSSVKGFVRRHYL---------LLERGNNPETS 558



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           KF+D   ++ EM + R   ++  F  VL  + K  K +    +   M++LG+S  + ++ 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI  +C+     ++  A A+   M++ G  P+ VT  +L++GFC+      A+ + + M
Sbjct: 644 ILIHCFCR---CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VV YN++INGLC +  L+ A+ +   M   G++ + VT N LI+G       
Sbjct: 701 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  L  D+ ++ + P+VI +  LID + KEG + +A  +   M+ R V+P+V TYN L
Sbjct: 761 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G    G +   + + + +V+ G    +VTYN L+   CK  + +  + L  EM     
Sbjct: 821 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM---TY 877

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +    +  TYN LI G+CQ GKL  A  + N +++ G+ P+  TY I+ + +   G I
Sbjct: 878 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 6/348 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +FED   ++ EM   +   ++  F  +L       +        + M+  G+S  + ++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI  +C+     ++  A +V   M++ G  P+ VTF +L+ GFC    I  A  +   M
Sbjct: 111 ILIHCFCR---CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VV YN+LI+GLC +G+L+ A+ L +EM   GL  +VVT N L+ G C     
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  +  D+ ++ ++P V+T+  LID + K+G +++A  +   M+   V P+  TYN +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G +   +   + + + G    +VTYN L+   CK     + + L     +M  
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ---RMSC 344

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           E    +I TYN LI G+CQ GKL  A  +   ++ + + P+  T+ I+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 3/257 (1%)

Query: 147  LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
            +  +V+    L+   VKEG   +   +YKEM RR +  N+ ++N ++NG C  G L  A 
Sbjct: 775  IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 834

Query: 207  DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
             + + M S G  P VVTYN LI G+CK   +    K   +F +M   G++ +  T+NTLI
Sbjct: 835  YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK---LFCEMTYQGLVGDAFTYNTLI 891

Query: 267  DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             G+C+   ++ A KVF  M   G++  +VTYN L++ LC +GK+++A+ + +++  S + 
Sbjct: 892  HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 951

Query: 327  PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
             +++T N +I G C+   +++A  LF  ++ +G+ P  I Y T+I   C++G   +A  +
Sbjct: 952  VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011

Query: 387  RNSMLDRGVLPDVSTYN 403
               M + G +P    Y+
Sbjct: 1012 CRRMKEDGFMPSERIYD 1028



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 3/258 (1%)

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GF        A  +F EM        +V +  L+       + +  +    +M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++ +   LI+ FC+   +  A  +   + + G  PS++T+ +L+  +C   R+ DAF++ 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G  P+V  YN LI GL + G +     ++NE+   G+ A +VTYN L+  LC  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L +M K       P++VT+  LI  F ++G L++A  L  E+++  + PN 
Sbjct: 225 GRWSDAARMLRDMMKRSIN---PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 508 TTYQIVREEMMEKGFIPD 525
            TY  +   +   G + D
Sbjct: 282 VTYNSIINGLCMHGRLYD 299



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 57/302 (18%)

Query: 49   YFCWSTKELRA---SHSLLLTG-----------RLLHSLVVAKKYPKIRSF---LHMFVK 91
            ++C   K +RA   +++ L++G           RLL  +V  K  P +  F   +  FVK
Sbjct: 732  FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791

Query: 92   NGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             G       ++  +   S   +    NS+I    +   + + K        K     G  
Sbjct: 792  EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK-----GCF 846

Query: 149  SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
              V++ N L+    K  + ED   ++ EM  + +  +  ++N +++G C+AGKLN A  +
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 209  MEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------------- 237
               M   GVSP +VTYNIL+D  C  G I                               
Sbjct: 907  FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966

Query: 238  -GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
              K+ +A  +F+ +   G+ P+ + + T+I G C+      A K+   M   G       
Sbjct: 967  TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026

Query: 297  YN 298
            Y+
Sbjct: 1027 YD 1028


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 277/620 (44%), Gaps = 108/620 (17%)

Query: 3   CSANSTIEDITEL---------IRNHHWSKLKN-----------TDPNTVILQLFNSDAD 42
           C+ N+ I  ++E          I+   W+  KN           TDP+  I  L +    
Sbjct: 39  CTLNNAIATLSETHYRDLIFDTIKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIR 98

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P + LR+F W   +     S  +   +L  LV           +   V       V  + 
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLI 158

Query: 103 HALSTC---SDSLCRNSIIIDML-------------MLAYVKNMKPHLGFEAFKRAGDYG 146
                C    D + RN ++ D+              +L+  KN+        +     +G
Sbjct: 159 AGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNV--------YGMMEQFG 210

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V++ N +L +  KEG+ +    +  EM+ R    N  ++N ++NGL K G+L +A 
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAK 270

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKG-----------------------------GI 237
            ++E+M + G++    TYN LI+G+C+KG                             G+
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 238 GKMYKADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
            K  +   V   F DM+++   P+ V+FN+L+ G+C+   IS A  +F+E+    +   V
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LI+GLC+ G LD A+ L+ EM   GL P++ T   L+NG  K   V  AR  F++
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +GL P    YNT I    K      AF+M+  ML  G  PDV TYN  +  L ++GN
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------- 460
            E   +++  +V++G+    VTY  ++    K+G  +KA  + +EM              
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 461 -----------------FKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                            F    EK  P N++TYN +I G C   ++++A    +E+ EKG
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 503 LIPNQTTYQIVREEMMEKGF 522
           ++PN+ +Y I+  E    G+
Sbjct: 631 ILPNKFSYTILINESCNMGY 650



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 230/502 (45%), Gaps = 62/502 (12%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST------IFHALSTCSD 110
           +RAS +++    +       ++     SFLH    N    ++S       IF  +     
Sbjct: 7   VRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDTIKEKPW 66

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           + C+N+ + D           PHL          + ++       +  R ++ +  F++ 
Sbjct: 67  AFCKNNWVSDQFGAVITD---PHLFIRVL-----HSMRIRPRVALRFFRWVMAQPDFKES 118

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           E+V               F  +L+ L     ++ A  +ME + S  +   V   ++LI G
Sbjct: 119 EFV---------------FCAILDILVGNDLMHAAYWVMERVVSFEMHGVV---DVLIAG 160

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI-SAAMKVFEEMGSHG 289
           +              VF  M+ NG+LP+    N ++    +DEN+ S A  V+  M   G
Sbjct: 161 HVX---------CLLVFDKMIRNGLLPDVKNCNRILRVL-RDENLLSKAKNVYGMMEQFG 210

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   VVTYN++++  C +G++D+A+ L  EM   G  PN VT N L+NG  KK  +E+A+
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAK 270

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L +++   GL+ S  TYN LI+ +C++G   +AF +   M++R   P +STYN L+ GL
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +   V GVR   ++++ +     +V++N L+   C+ G   +A  L DE   ++     
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE---LKCRDLV 387

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---------------- 513
           P ++TYN LI G C  G L+ A  L  E+ ++GL P+  TY I+                
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447

Query: 514 REEMMEKGFIPDIEGHMYNISG 535
             EM+ KG  PD   +   I G
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVG 469



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++S N LL    + G   +   ++ E+K R +   + ++N +++GLC  G L+ A  + +
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+ P + TY IL++G C K G   M  A   F +M+  G+ P+   +NT I G  
Sbjct: 415 EMTDQGLFPDIFTYTILVNG-CFKLGYVSM--ARGFFNEMLSKGLKPDRFAYNTRIVGEM 471

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K  + S A  + EEM + G    V+TYN  ++ LC  G  +EA  L + M++ GL P+ V
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T  ++INGF K   + KAR +F+++  +G++PSV+TY  LI A+  +  ++ AF   + M
Sbjct: 532 TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L++ V  +V TYN +I GL     ++      +E+   G+     +Y IL+   C  G  
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++A+ L  EM      K  P+  T++V +K
Sbjct: 652 EEALRLYREML---DRKIQPDSFTHSVFLK 678



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 157/301 (52%), Gaps = 19/301 (6%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA  V+  M + GI P  VT+NT++D +CK+  +  A+++  EM   G     VTYN L+
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NGL   G+L++A  L +EM+ SGL  +  T N LINGFC+K L  +A  L +++  +   
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P++ TYNTL+   CK  ++       + ML     PD+ ++N L+ G  R G +     +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +EL    +   ++TYN L+  LC  G    A+ L  E   M  +  +P+I TY +L+ G
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE---MTDQGLFPDIFTYTILVNG 434

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
             + G +  A G  NE+L KGL P++  Y                  ++EEM+  GF PD
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 526 I 526
           +
Sbjct: 495 V 495



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 18/385 (4%)

Query: 68  RLLHSLVVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIII 119
           RL  S ++  K+ P I SF   L+ + + G  +    +F  L  C D     +  N++I 
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK-CRDLVPTVITYNTLIH 398

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            + M  Y+            K   D GL   + +   L+    K G        + EM  
Sbjct: 399 GLCMWGYLDA-----ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + ++ +  ++N  + G  K    + A  + E+M + G  P V+TYN+ +   C++G   +
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  + ++MV +G++P+ VT+ ++I+GF K+ ++  A +VF EM S G+A  VVTY  
Sbjct: 514 ---ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+       LD A     +M+   +  NV+T NA+ING C  + +++A   FD++ E+G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P+  +Y  LI+  C  G  E+A  +   MLDR + PD  T++  +  L R+  V  V+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690

Query: 420 NIMNELVNNGMRAGLVTYNILVGAL 444
            +   L+ N      V   +L+G L
Sbjct: 691 CV-ESLIQNVEDNINVRIEMLIGGL 714


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 200/388 (51%), Gaps = 36/388 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  L++   F+   +++ E+K + + L+  SF  ++ G C+AG   K   ++  ++ 
Sbjct: 128 NNLLCLLIRSNYFDKAWWIFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE 186

Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
            G+SP VV Y  LIDG CK G +                                G   +
Sbjct: 187 FGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQRE 246

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              ++++M  +GI+PN   +N LI  +C D  +  A KVF EM   GIA GV+TYN LI 
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   K  EAV L  ++   GL PN+VT N LINGFC  + ++ A  LF+ +   GLSP
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSP 366

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +++TYNTLI  Y K   +  A  +   M +R + P   TY  LI   +R  + E    + 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +  +G+   + TY++L+  LC  G  K+A  L   + +M  +   PN V YN +I G+
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQ---PNSVIYNTMIHGY 483

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY 510
           C++G    A  LLNE+++ G++PN  ++
Sbjct: 484 CKEGSSYRALRLLNEMVQSGMVPNVASF 511



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 203/381 (53%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GF       ++GL  +V+    L+    K+G     + ++ +M R  +  N  +++ ++N
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMN 236

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  K G   +   + E+MK  G+ P    YN LI  YC  G + K +K   VF +M E G
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFK---VFAEMREKG 293

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I    +T+N LI G C+ +    A+K+  ++   G++  +VTYN LING C   K+D AV
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +++ +SGL P +VT N LI G+ K + +  A  L  ++ E+ ++PS +TY  LIDA+
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            +    E A  M + M   G++PDV TY+ L+ GL   GN++    +   L    ++   
Sbjct: 414 ARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V YN ++   CK+G S +A+ LL+EM    +    PN+ ++   I   C+  K ++A  L
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMV---QSGMVPNVASFCSTIGLLCRDEKWKEAELL 530

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           L +++  GL P+ + Y++V +
Sbjct: 531 LGQMINSGLKPSVSLYKMVHK 551



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 181/349 (51%), Gaps = 3/349 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +I   L+    K+    L    F +    GL  +  + + L+    K+G   +  
Sbjct: 189 LSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGF 248

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +Y+ MKR  I  N  ++N +++  C  G ++KA  +  +M+  G++  V+TYNILI G 
Sbjct: 249 QMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+    G+  K   +   + + G+ PN VT+N LI+GFC    + +A+++F ++ S G++
Sbjct: 309 CRGKKFGEAVK---LVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTYN+LI G      L  A+ L  EM    + P+ VT   LI+ F +    EKA  +
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + + GL P V TY+ L+   C  G M++A  +  S+ +  + P+   YN +I G  +
Sbjct: 426 HSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           EG+      ++NE+V +GM   + ++   +G LC+D K K+A  LL +M
Sbjct: 486 EGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 160/340 (47%), Gaps = 23/340 (6%)

Query: 187 DSFNFVLNGLCKAGKLNKA-------------SDIMEDMKSLGVSP---KVVTYNILIDG 230
            S +F+LN L  +G L +A             S +M  +     +P       Y+ +++ 
Sbjct: 39  HSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNA 98

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           Y       +   A      M+  G +P   TFN L+    +      A  +F E+ S  +
Sbjct: 99  YVHSHSTDQ---ALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-V 154

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                ++  +I G C  G   +   L   +   GL PNVV    LI+G CK   V  A+ 
Sbjct: 155 VLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKN 214

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF  ++  GL P+  TY+ L++ + K+G   + F M  +M   G++P+   YNCLI+   
Sbjct: 215 LFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYC 274

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
            +G V+    +  E+   G+  G++TYNIL+G LC+  K  +AV L+    K+ K    P
Sbjct: 275 NDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH---KVNKVGLSP 331

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           NIVTYN+LI GFC   K++ A  L N+L   GL P   TY
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTY 371



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 4/156 (2%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y+T+++AY      + A    + M+  G +P  +T+N L+  L R    +    I NEL 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL- 150

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            + +     ++ I++   C+ G   K   LL     +E+    PN+V Y  LI G C+ G
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA---MLEEFGLSPNVVIYTTLIDGCCKDG 207

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            +  A  L  ++   GL+PN  TY ++     ++G 
Sbjct: 208 NVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGL 243


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 45/433 (10%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           +PH+     +   + G     L+   ++R L   G   D  +++ EM RR +  ++ +FN
Sbjct: 60  RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119

Query: 191 FVLN-----------------------------------GLCKAGKLNKASDIMEDMKSL 215
            VL+                                   GLC+ G+L +A  ++E M + 
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
            ++P VVTYN L+ G CK     K+ +A    + M+  G +P++ T+NT+IDG+CK + +
Sbjct: 180 -IAPDVVTYNTLMRGLCKDS---KVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDML 235

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A ++ ++    G     VTY SLINGLC +G ++ A+ L +E  A  LKP++V  N+L
Sbjct: 236 QEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSL 295

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           + G C++ L+  A  + +++ E G  P + TYN +I+  CK G + DA  + N  + +G 
Sbjct: 296 VKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY 355

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           LPDV T+N +I G  +   ++    ++  +   G+    +TYN ++  LCK GK+K+   
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             +EM     +   PN +TYN+LI+ FC+  +LE+A+G++  + + GL+P+  ++  +  
Sbjct: 416 TFEEMI---LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 516 EMMEKGFIPDIEG 528
                G   D++G
Sbjct: 473 GFCRNG---DLDG 482



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 199/379 (52%), Gaps = 18/379 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L  EG  E    ++ E + + ++ +L  +N ++ GLC+ G +  A  +M +M   G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P + TYNI+I+G CK G I     A  V  D +  G LP+  TFNT+IDG+CK   + 
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISD---AAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLD 376

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           +A+++ E M  +GIA   +TYNS++NGLC  GK  E     +EM+  G +PN +T N LI
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             FCK   +E+A  +   +S+ GL P  I++NTLI  +C+ G ++ A+ +   + ++G  
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
               T+N LI   S + N++    I  E+++ G +  L TY +LV   CK     +A   
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ--------- 507
           L EM     +   P++ T+  ++       ++ +A  +++ ++  G++P           
Sbjct: 557 LAEMV---SKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDK 613

Query: 508 ---TTYQIVREEMMEKGFI 523
                 +I+ EE+M+KG I
Sbjct: 614 KEIAAPKILVEELMKKGHI 632



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 11/381 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F  A    LK  ++  N L++ L ++G       V  EM       ++ ++N V+N
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLCK G ++ A+ +M D    G  P V T+N +IDGYCK+    K+  A  + + M   G
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKR---LKLDSALQLVERMWMYG 389

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ +T+N++++G CK        + FEEM   G     +TYN LI   C   +L+EA 
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M   GL P+ ++ N LI+GFC+   ++ A +LF  + E+G S +  T+N LI AY
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 509

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             +  M+ A  +   M+ +G  PD+ TY  L+ G  +  NV+     + E+V+ G    +
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSM 569

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            T+  ++ +L  + +  +AV+++  M +M        +V   V       K ++     L
Sbjct: 570 ATFGRVLNSLAMNHRVSEAVAIIHIMVRM-------GVVPEVVDTILSTDKKEIAAPKIL 622

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           + EL++KG I +  TY+++ E
Sbjct: 623 VEELMKKGHI-SYPTYEVLHE 642



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 36/355 (10%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG------------ 235
           ++N +++ L      ++A  +   M S GV+P   T+ + I  +C  G            
Sbjct: 12  AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 236 --------------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
                                 G  Y A  +F +M+   + P+  TFN ++   C+  +I
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             +  +  ++   G++    T N  I GLC  G+L+EAVAL + M A  + P+VVT N L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTL 190

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           + G CK   V++A      +  QG  P   TYNT+ID YCK   +++A  +    + +G 
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PD  TY  LI GL  EG+VE    + NE     ++  LV YN LV  LC+ G    A+ 
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +++EM    ++   P+I TYN++I G C+ G + DA  ++N+ + KG +P+  T+
Sbjct: 311 VMNEMV---EDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 154/341 (45%), Gaps = 25/341 (7%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G  P    YN ++D         + +K   V+  M+  G+ P+  T    I  FC 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHK---VYVRMLSAGVAPDARTHTVRIKSFCI 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
                 A+++   +   G     + Y +++ GL   G   +A  L DEM+   + P+V T
Sbjct: 58  TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +++  C+K  + ++  L   + ++G+S +  T N  I   C+ GR+E+A A+  SM 
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM- 176

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           D  + PDV TYN L+ GL ++  V+     +  ++N G      TYN ++   CK    +
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 452 KAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A  LL D +FK       P+ VTY  LI G C +G +E A  L NE   K L P+   Y
Sbjct: 237 EATELLKDAIFK----GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 511 QI----------------VREEMMEKGFIPDIEGHMYNISG 535
                             V  EM+E G  PDI  +   I+G
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 16/309 (5%)

Query: 67  GRLLHSLVVAKK------YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI--- 117
           G +LH+L V  +      +P I ++    V NG    +  I  A    +D++ +  +   
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTY--NIVING-LCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 118 -IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
              + ++  Y K +K     +  +R   YG+    ++ N +L  L K GK ++V   ++E
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  +    N  ++N ++   CK  +L +AS ++  M   G+ P  +++N LI G+C+ G 
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +   Y    +F+ + E G      TFN LI  +    N+  A K+F EM S G    + T
Sbjct: 480 LDGAY---LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 536

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  L++G C    +D A     EM++ G  P++ T   ++N       V +A  +   + 
Sbjct: 537 YRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMV 596

Query: 357 EQGLSPSVI 365
             G+ P V+
Sbjct: 597 RMGVVPEVV 605


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/606 (28%), Positives = 270/606 (44%), Gaps = 79/606 (13%)

Query: 1   PFCS---ANSTIE-----DITELIRNHHWSKLKNTDPNTVIL------------QLFNSD 40
           PF S   AN++ +      + ++I+   W+     DP  V+L             L    
Sbjct: 27  PFVSYSNANNSFQYLDIGSLRKIIQQDLWN-----DPKIVVLFDSALAPIWVSKILLGLR 81

Query: 41  ADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFT---S 97
            DP L L++F W+  ++   H+      ++H +  A+ Y      +   + N +      
Sbjct: 82  EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 141

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           V  IF  L +  +     S + D+L   +V+        E F R  ++       SCN L
Sbjct: 142 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 201

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           L  L K G  + V   + +M    I  ++ ++N +++ LCK G L  +  +   M+ +G+
Sbjct: 202 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 261

Query: 218 SPKVVTYNILIDGYCKKGGI--------------------------------GKMYKADA 245
           SP VVTYN LIDGY K G +                                 KM +A  
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
            F +M  NG+ PN VT++TLID FCK+  +  A+K+  +M   G+     TY SLI+  C
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G L EA  L ++M+ +G+K N+VT  AL++G CK   + +A  +F  + + G+SP+  
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y  L+  Y K  RMEDA  +   M +  + PD+  Y  +I G   +  +E  + I+ E+
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G+ A  V    ++ A  K GKS  A++   EM  +  E     IVTY VLI G C+ 
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE---ATIVTYCVLIDGLCEA 558

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGH 529
           G +E A      +L  GL PN   Y                + + +EM  +G  PDI   
Sbjct: 559 GIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAF 618

Query: 530 MYNISG 535
              I G
Sbjct: 619 TALIDG 624



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 224/439 (51%), Gaps = 10/439 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G    V+++F+ +    D  C   II  + L+  Y K  K    FE F   
Sbjct: 270 SLIDGYGKVGSLEEVASLFNEMK---DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 326

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + GLK +V++ + L+ A  KEG  +    +  +M+R  +  N  ++  +++  CKAG L
Sbjct: 327 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNL 386

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  ++ DM   GV   +VTY  L+DG CK G   +M +A+ VF+ M+++GI PN+  +
Sbjct: 387 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG---RMIEAEEVFRSMLKDGISPNQQVY 443

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L+ G+ K E +  AMK+ ++M    I   ++ Y S+I G C   KL+E   + +EM +
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+  N V S  +I+ + K      A   F ++ + G+  +++TY  LID  C+ G +E 
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVEL 563

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      ML  G+ P+V+ Y  LI GL     +E  + + +E+   GM   +  +  L+ 
Sbjct: 564 AVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G  ++A+ L+  M ++  E    ++  Y  L+ GF Q G+L  A    NE++EKG
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEF---DLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680

Query: 503 LIPNQTTYQIVREEMMEKG 521
           ++P +     +  E  ++G
Sbjct: 681 ILPEEVLCICLLREYYKRG 699



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 177/343 (51%), Gaps = 6/343 (1%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA+K   D    G+K ++++   LL  L K G+  + E V++ M +  I  N   +  ++
Sbjct: 388 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 447

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G  KA ++  A  I++ M    + P ++ Y  +I G+C +    K+ +   + ++M   
Sbjct: 448 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR---KLEETKLILEEMKSR 504

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI  N V   T+ID + K    S A+  F+EM   G+ A +VTY  LI+GLC  G ++ A
Sbjct: 505 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELA 564

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           V     M++ GL+PNV    +LI+G C    +E A+ LFD++  +G++P +  +  LID 
Sbjct: 565 VDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 624

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             K G +++A  + + M +  +  D+  Y  L++G S+ G +   R   NE++  G+   
Sbjct: 625 NLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
            V    L+    K G+  +A+ L +EM +M    ++   + YN
Sbjct: 685 EVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYN 727


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/464 (31%), Positives = 232/464 (50%), Gaps = 21/464 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH     +  P    F  +     K    ST+  +LS   DS     I  D+  LA V
Sbjct: 60  RMLHK----QPPPSTVDFNRLLTSIAKTKHHSTLL-SLSRQMDSF---GIPPDVYTLAIV 111

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL      F A  +    G +    +   L+R L  EGK  +  +++ +M     
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + N+ ++  ++NGLCK G  + A  ++  M+     P VV ++ LID  CK   + + + 
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +F +M+  GI PN VT+N+LI G CK         +  EM    I   V T N++++
Sbjct: 232 ---IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +G + EA  + D M+  G++PNVVT NAL++G C +  V+ A  +FD +  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+YNTLI+ YCK   ++ A  +   M  + + P+  TYN LI GL   G ++   ++ 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKG 481
           +E+V  G    LVTY  L   LCK+    KA++LL    K  +   W P+I  Y  ++ G
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL----KAIEGSNWDPDIQIYTTILDG 464

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            C+ G+LEDA  L + L  KGL PN  TY I+   + ++G + +
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 220/408 (53%), Gaps = 22/408 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F +    G + +V++   L+  L K G       + + M++   + N+  F+ +++
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  ++ +A +I  +M + G+SP +VTYN LI G CK   + +      +  +MV++ 
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNEMVDSK 275

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+P+  T NT++D  CK+  ++ A  V + M   G+   VVTYN+L++G C+  ++D AV
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M+      NV++ N LING+CK + V+KA  LF+++S Q L+P+ +TYNTLI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  GR++DA ++ + M+ RG +PD+ TY  L   L +  +++    ++  +  +     +
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y  ++  +C+ G+ + A  L      +  +   PN+ TYN++I G C++G L +A+ L
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFS---NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 495 LNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
            +E+ + G  PN  TY ++                 EEM+ +GF  D+
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F R        S +  N+LL ++ K      +  + ++M    I  ++ +   V+N
Sbjct: 54  ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC   +++ A   +  +  LG  P   T+  LI G C +G IG+   A  +F  M+  G
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE---ALHLFDKMIGEG 170

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  N SAA+++   M        VV +++LI+ LC D ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM+  G+ PN+VT N+LI+G CK    +    L +++ +  + P V T NT++DA 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG + +A  + + M+ RGV P+V TYN L+ G      V+    + + +V+    A +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++YN L+   CK     KA+ L +EM + E     PN VTYN LI G C  G+L+DA  L
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELT---PNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
            +E++ +G IP+  TY+ + +
Sbjct: 408 FHEMVARGQIPDLVTYRTLSD 428



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 199/375 (53%), Gaps = 6/375 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V+  + L+ +L K+ +  +   ++ EM  + I  N+ ++N +++GLCK  +    + 
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +M +M    + P V T N ++D  CK+G + +   A  V   M+  G+ PN VT+N L+D
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE---AHDVVDMMIHRGVEPNVVTYNALMD 323

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C    +  A+KVF+ M      A V++YN+LING C    +D+A+ L +EM    L P
Sbjct: 324 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 383

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT N LI+G C    ++ A  LF ++  +G  P ++TY TL D  CK   ++ A A+ 
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            ++      PD+  Y  ++ G+ R G +E  R++ + L + G++  + TYNI++  LCK 
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G   +A  L  E   M K    PN  TYN++ +GF +  +      LL E+L +G   + 
Sbjct: 504 GLLAEASKLFSE---MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560

Query: 508 TTYQIVREEMMEKGF 522
           +T  ++   + + G 
Sbjct: 561 STTTLLVGMLSDDGL 575



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 50/388 (12%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
             ST  DSLC++  + +               F  F      G+  ++++ N L+  L K
Sbjct: 212 VFSTLIDSLCKDRQVTE--------------AFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             +++ V  +  EM   +I  ++ + N V++ LCK G + +A D+++ M   GV P VVT
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317

Query: 224 YNILIDGYCKKG--------------------------------GIGKMYKADAVFKDMV 251
           YN L+DG+C +                                  I  + KA  +F++M 
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + PN VT+NTLI G C    +  A+ +F EM + G    +VTY +L + LC +  LD
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+AL   +  S   P++     +++G C+   +E AR LF ++S +GL P+V TYN +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI--MNELVNNG 429
              CK+G + +A  + + M   G  P+  TYN +  G  R  N E +R I  + E++  G
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR--NNEALRTIELLEEMLARG 555

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLL 457
               + T  +LVG L  DG  +    +L
Sbjct: 556 FSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 180/359 (50%), Gaps = 21/359 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+H L    ++  + + ++  V +     V T    L+T  D+LC+  ++ +      V 
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT----LNTVVDALCKEGMVAEA---HDVV 303

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +M  H G E            +V++ N L+       + +    V+  M  +    N+ S
Sbjct: 304 DMMIHRGVEP-----------NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG CK   ++KA  + E+M    ++P  VTYN LI G C    +G++  A ++F 
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH---VGRLQDAISLFH 409

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +MV  G +P+ VT+ TL D  CK+ ++  AM + + +        +  Y ++++G+C  G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L++A  L   + + GL+PNV T N +I+G CK+ L+ +A  LF ++++ G SP+  TYN
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +   + +         +   ML RG   DVST   L+  LS +G  + V+ I+ + V 
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 140/269 (52%), Gaps = 3/269 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A + F  M+     P+ V FN L+    K ++ S  + +  +M S GI   V T   +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC   ++D A +   +++  G +P+  T   LI G C +  + +A  LFD +  +G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY TLI+  CK G    A  +  SM      P+V  ++ LI  L ++  V    NI
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++  G+   +VTYN L+  LCK  + K   +L++EM      K  P++ T N ++  
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDA 289

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C++G + +A+ +++ ++ +G+ PN  TY
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 13/264 (4%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FNTL      DE    A+  F  M         V +N L+  +         ++L  +M 
Sbjct: 48  FNTL------DE----ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G+ P+V T   +IN  C    V+ A      I + G  P   T+ TLI   C EG++ 
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + M+  G  P+V TY  LI GL + GN      ++  +     +  +V ++ L+
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +LCKD +  +A ++  EM     +   PNIVTYN LI G C+  + +    L+NE+++ 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMI---TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 502 GLIPNQTTYQIVREEMMEKGFIPD 525
            ++P+  T   V + + ++G + +
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAE 298


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 209/366 (57%), Gaps = 10/366 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K G+      + + +  + ++ N+  +N +++ +CK   +N+A D+  +M S G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP VVTY+ LI G+C    +GK+  A  +F  M+   I P+  TF+ L+DGFCK+  + 
Sbjct: 227 ISPDVVTYSALISGFCI---LGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  V   M   GI   VVTY SL++G C+  ++++A ++ + M   G+  NV + N +I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NGFCK K V++A  LF ++  + + P V+TYN+LID  CK G++  A  + + M DRGV 
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            D  TYN ++  L +   V+    ++ ++ + G++  + TY IL+  LCK G+ K A ++
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463

Query: 457 LDEMFKMEKEKKWPNIV--TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            +++       K  NI   TY V+I+GFC     + A  LL+++ + G IPN  TY+I+ 
Sbjct: 464 FEDLL-----VKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518

Query: 515 EEMMEK 520
             + EK
Sbjct: 519 LSLFEK 524



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 209/370 (56%), Gaps = 6/370 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  +R     ++ +V+  N ++ ++ K     +   +Y EM  + I  ++ +++ +++
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS 239

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  GKLN A  +   M S  ++P V T++IL+DG+CK+G   ++ +A  V   M++ G
Sbjct: 240 GFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEG---RVKEAKNVLAMMMKQG 296

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ VT+ +L+DG+C  + ++ A  +F  M   G+ A V +YN +ING C   K+DEA+
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + P+VVT N+LI+G CK   +  A  L D++ ++G+    ITYN+++DA 
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  +++ A A+   M D G+ PD+ TY  LI GL + G ++  +NI  +L+  G    +
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY +++   C +    KA++LL    KME     PN  TY ++I    +K + + A  L
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLS---KMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533

Query: 495 LNELLEKGLI 504
           L E++ +GL+
Sbjct: 534 LREMIARGLL 543



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 217/383 (56%), Gaps = 8/383 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ S +++ N L+    + G       V+  + ++  E N  +   ++ GLC  G++++A
Sbjct: 86  GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + +LG     V Y  LI+G CK   +G+   A  + + +    + PN V +NT+
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCK---VGQTSAALQLLRRVDGKLVQPNVVMYNTI 202

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK + ++ A  ++ EM S GI+  VVTY++LI+G C+ GKL++A+ L ++M++  +
Sbjct: 203 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI 262

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T + L++GFCK+  V++A+ +   + +QG+ P V+TY +L+D YC   ++  A +
Sbjct: 263 NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N+M   GV  +V +YN +I G  +   V+   N+  E+    +   +VTYN L+  LC
Sbjct: 323 IFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC 382

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K GK   A+ L+DEM     ++  P + +TYN ++   C+  +++ A  LL ++ ++G+ 
Sbjct: 383 KSGKISYALKLVDEM----HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 438

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
           P+  TY I+ + + + G + D +
Sbjct: 439 PDMYTYTILIDGLCKGGRLKDAQ 461



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 222/448 (49%), Gaps = 70/448 (15%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H    +F R  +      +    ++L +LVK   ++    +++EM+   I  +L +FN +
Sbjct: 38  HSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNIL 97

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------- 237
           +N   + G  + +  +  ++   G  P  +T   LI G C KG I               
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G+   A  + + +    + PN V +NT+ID  CK + ++ A  
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE--------------------- 319
           ++ EM S GI+  VVTY++LI+G C+ GKL++A+ L ++                     
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 320 --------------MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
                         MM  G+KP+VVT  +L++G+C  K V KA+ +F+ +++ G++ +V 
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +YN +I+ +CK  ++++A  +   M  + ++PDV TYN LI GL + G +     +++E+
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G+    +TYN ++ ALCK+ +  KA++LL    KM+ E   P++ TY +LI G C+ 
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLT---KMKDEGIQPDMYTYTILIDGLCKG 454

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV 513
           G+L+DA  +  +LL KG      TY ++
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVM 482



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 184/335 (54%), Gaps = 6/335 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F  +L  L K      A  +  +M+  G++  +VT+NILI+ + +   +G  + + +VF 
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ---LGHTHFSFSVFA 115

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           ++++ G  PN +T  TLI G C    I  A+   +++ + G     V Y +LINGLC  G
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   A+ L   +    ++PNVV  N +I+  CK KLV +A  L+ ++  +G+SP V+TY+
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI  +C  G++ DA  + N M+   + PDV T++ L+ G  +EG V+  +N++  ++  
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++  +VTY  L+   C   +  KA S+ +    M +     N+ +YN++I GFC+  K+
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT---MAQGGVTANVQSYNIMINGFCKIKKV 352

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++A  L  E+  K +IP+  TY  + + + + G I
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V + + L+    KEG+ ++ + V   M ++ I+ ++ ++  +++G C   ++NKA 
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            I   M   GV+  V +YNI+I+G+CK   I K+ +A  +FK+M    I+P+ VT+N+LI
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCK---IKKVDEAMNLFKEMHCKNIIPDVVTYNSLI 378

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG CK   IS A+K+ +EM   G+    +TYNS+++ LC + ++D+A+AL  +M   G++
Sbjct: 379 DGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 438

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++ T   LI+G CK   ++ A+ +F+D+  +G + +V TY  +I  +C     + A A+
Sbjct: 439 PDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALAL 498

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            + M D G +P+  TY  +I  L  +   +    ++ E++  G+  G
Sbjct: 499 LSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFG 545



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           ++L+  F +  NI+    +FE             +  ++  L        A++L  EM  
Sbjct: 38  HSLVSSFNRILNINPTPPIFE-------------FGKILGSLVKINCYQTAISLHREMEF 84

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +G+  ++VT N LIN F +      +  +F +I ++G  P+ IT  TLI   C +G++  
Sbjct: 85  NGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQ 144

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A    + ++  G   +   Y  LI GL + G       ++  +    ++  +V YN ++ 
Sbjct: 145 ALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 204

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           ++CK     +A  L  EM     +   P++VTY+ LI GFC  GKL DA GL N+++ + 
Sbjct: 205 SMCKVKLVNEAFDLYSEMV---SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261

Query: 503 LIPNQTTYQI----------VREE------MMEKGFIPDI 526
           + P+  T+ I          V+E       MM++G  PD+
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDV 301



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 22/209 (10%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P +     ++    K    + A  L  ++   G++  ++T+N LI+ + + G    +F++
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             ++L +G  P+  T   LI GL  +G +    +  +++V  G     V Y  L+  LCK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G++  A+ LL    +++ +   PN+V YN +I   C+         L+NE  +      
Sbjct: 174 VGQTSAALQLLR---RVDGKLVQPNVVMYNTIIDSMCKVK-------LVNEAFD------ 217

Query: 507 QTTYQIVREEMMEKGFIPDIEGHMYNISG 535
                 +  EM+ KG  PD+  +   ISG
Sbjct: 218 ------LYSEMVSKGISPDVVTYSALISG 240


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/464 (31%), Positives = 232/464 (50%), Gaps = 21/464 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH     +  P    F  +     K    ST+  +LS   DS     I  D+  LA V
Sbjct: 60  RMLHK----QPPPSTVDFNRLLTSIAKTKHHSTLL-SLSRQMDSF---GIPPDVYTLAIV 111

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL      F A  +    G +    +   L+R L  EGK  +  +++ +M     
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + N+ ++  ++NGLCK G  + A  ++  M+     P VV ++ LID  CK   + + + 
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +F +M+  GI PN VT+N+LI G CK         +  EM    I   V T N++++
Sbjct: 232 ---IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +G + EA  + D M+  G++PNVVT NAL++G C +  V+ A  +FD +  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+YNTLI+ YCK   ++ A  +   M  + + P+  TYN LI GL   G ++   ++ 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKG 481
           +E+V  G    LVTY  L   LCK+    KA++LL    K  +   W P+I  Y  ++ G
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL----KAIEGSNWDPDIQIYTTILDG 464

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            C+ G+LEDA  L + L  KGL PN  TY I+   + ++G + +
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 220/408 (53%), Gaps = 22/408 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F +    G + +V++   L+  L K G       + + M++   + N+  F+ +++
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  ++ +A +I  +M + G+SP +VTYN LI G CK   + +      +  +MV++ 
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNEMVDSK 275

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+P+  T NT++D  CK+  ++ A  V + M   G+   VVTYN+L++G C+  ++D AV
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M+      NV++ N LING+CK + V+KA  LF+++S Q L+P+ +TYNTLI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  GR++DA ++ + M+ RG +PD+ TY  L   L +  +++    ++  +  +     +
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y  ++  +C+ G+ + A  L      +  +   PN+ TYN++I G C++G L +A+ L
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFS---NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 495 LNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
            +E+ + G  PN  TY ++                 EEM+ +GF  D+
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F R        S +  N+LL ++ K      +  + ++M    I  ++ +   V+N
Sbjct: 54  ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC   +++ A   +  +  LG  P   T+  LI G C +G IG+   A  +F  M+  G
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE---ALHLFDKMIGEG 170

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  N SAA+++   M        VV +++LI+ LC D ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM+  G+ PN+VT N+LI+G CK    +    L +++ +  + P V T NT++DA 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG + +A  + + M+ RGV P+V TYN L+ G      V+    + + +V+    A +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++YN L+   CK     KA+ L +EM + E     PN VTYN LI G C  G+L+DA  L
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELT---PNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
            +E++ +G IP+  TY+ + +
Sbjct: 408 FHEMVARGQIPDLVTYRTLSD 428



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 199/375 (53%), Gaps = 6/375 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V+  + L+ +L K+ +  +   ++ EM  + I  N+ ++N +++GLCK  +    + 
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +M +M    + P V T N ++D  CK+G + +   A  V   M+  G+ PN VT+N L+D
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE---AHDVVDMMIHRGVEPNVVTYNALMD 323

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C    +  A+KVF+ M      A V++YN+LING C    +D+A+ L +EM    L P
Sbjct: 324 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 383

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT N LI+G C    ++ A  LF ++  +G  P ++TY TL D  CK   ++ A A+ 
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            ++      PD+  Y  ++ G+ R G +E  R++ + L + G++  + TYNI++  LCK 
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G   +A  L  E   M K    PN  TYN++ +GF +  +      LL E+L +G   + 
Sbjct: 504 GLLAEASKLFSE---MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560

Query: 508 TTYQIVREEMMEKGF 522
           +T  ++   + + G 
Sbjct: 561 STTTLLVGMLSDDGL 575



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 50/388 (12%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
             ST  DSLC++  + +               F  F      G+  ++++ N L+  L K
Sbjct: 212 VFSTLIDSLCKDRQVTE--------------AFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             +++ V  +  EM   +I  ++ + N V++ LCK G + +A D+++ M   GV P VVT
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317

Query: 224 YNILIDGYCKKG--------------------------------GIGKMYKADAVFKDMV 251
           YN L+DG+C +                                  I  + KA  +F++M 
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + PN VT+NTLI G C    +  A+ +F EM + G    +VTY +L + LC +  LD
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+AL   +  S   P++     +++G C+   +E AR LF ++S +GL P+V TYN +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI--MNELVNNG 429
              CK+G + +A  + + M   G  P+  TYN +  G  R  N E +R I  + E++  G
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR--NNEALRTIELLEEMLARG 555

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLL 457
               + T  +LVG L  DG  +    +L
Sbjct: 556 FSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 181/358 (50%), Gaps = 21/358 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+H L    ++  + + ++  V +     V T    L+T  D+LC+  ++ +      V 
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT----LNTVVDALCKEGMVAEA---HDVV 303

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +M  H G E            +V++ N L+       + +    V+  M  +    N+ S
Sbjct: 304 DMMIHRGVEP-----------NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG CK   ++KA  + E+M    ++P  VTYN LI G C    +G++  A ++F 
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH---VGRLQDAISLFH 409

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +MV  G +P+ VT+ TL D  CK+ ++  AM + + +        +  Y ++++G+C  G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L++A  L   + + GL+PNV T N +I+G CK+ L+ +A  LF ++++ G SP+  TYN
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            +   + +         +   ML RG   DVST   L+  LS +G  + V+ I+ ++V
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 140/269 (52%), Gaps = 3/269 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A + F  M+     P+ V FN L+    K ++ S  + +  +M S GI   V T   +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC   ++D A +   +++  G +P+  T   LI G C +  + +A  LFD +  +G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY TLI+  CK G    A  +  SM      P+V  ++ LI  L ++  V    NI
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++  G+   +VTYN L+  LCK  + K   +L++EM      K  P++ T N ++  
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDA 289

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C++G + +A+ +++ ++ +G+ PN  TY
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 13/264 (4%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FNTL      DE    A+  F  M         V +N L+  +         ++L  +M 
Sbjct: 48  FNTL------DE----ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G+ P+V T   +IN  C    V+ A      I + G  P   T+ TLI   C EG++ 
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + M+  G  P+V TY  LI GL + GN      ++  +     +  +V ++ L+
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +LCKD +  +A ++  EM     +   PNIVTYN LI G C+  + +    L+NE+++ 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMI---TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 502 GLIPNQTTYQIVREEMMEKGFIPD 525
            ++P+  T   V + + ++G + +
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAE 298


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 205/368 (55%), Gaps = 9/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N ++    K G+  +   V   + R  +  ++ ++N +L  LC +GKL +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQA 223

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++ M      P V+TY ILI+  C+  G+G+  K   +  +M + G  P+ VT+N L
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK---LLDEMRDRGCTPDVVTYNVL 280

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G CK+  +  A+K   +M S G    V+T+N ++  +C  G+  +A  L  +M+  G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LIN  C+K L+ +A  + + + + G  P+ ++YN L+  +CKE +M+ A  
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+ RG  PD+ TYN ++  L ++G VE    I+N+L + G    L+TYN ++  L 
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK+ KA+ LLDEM   + +   P+ +TY+ L+ G  ++GK+++A    +E    G+ P
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLK---PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517

Query: 506 NQTTYQIV 513
           N  T+  +
Sbjct: 518 NAVTFNSI 525



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 205/376 (54%), Gaps = 9/376 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GF+  +    +G    ++ C  L+R   + GK      + + ++      ++ ++N +++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMIS 180

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CKAG++N A  +++ M    VSP VVTYN ++   C  G   K+ +A  V   M++  
Sbjct: 181 GYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSG---KLKQAMEVLDRMLQRD 234

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ +T+  LI+  C+D  +  AMK+ +EM   G    VVTYN L+NG+C +G+LDEA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
              ++M +SG +PNV+T N ++   C       A  L  D+  +G SPSV+T+N LI+  
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C++G +  A  +   M   G  P+  +YN L+ G  +E  ++     +  +V+ G    +
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYN ++ ALCKDGK + AV +L+++     +   P ++TYN +I G  + GK   A  L
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQL---SSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 495 LNELLEKGLIPNQTTY 510
           L+E+  K L P+  TY
Sbjct: 472 LDEMRAKDLKPDTITY 487



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 258/526 (49%), Gaps = 35/526 (6%)

Query: 2   FCSANST--IEDITELIRNHHWSKLKNTDP--------NTVILQLFNSDADP-VLILRYF 50
           F SANS+  +ED+     N+H  +L  T            ++      D  P   ++R F
Sbjct: 91  FSSANSSFVLEDVES---NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGF 147

Query: 51  CWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALST 107
           C   K  +A+       ++L  L  +   P + ++  M   + K G+  +  ++   +S 
Sbjct: 148 CRMGKTRKAA-------KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
             D +  N+I+  +     +K        E   R         V++   L+ A  ++   
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQ-----AMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
                +  EM+ R    ++ ++N ++NG+CK G+L++A   + DM S G  P V+T+NI+
Sbjct: 256 GQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +   C     G+   A+ +  DM+  G  P+ VTFN LI+  C+   +  A+ + E+M  
Sbjct: 316 LRSMCS---TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 372

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
           HG     ++YN L++G C + K+D A+   + M++ G  P++VT N ++   CK   VE 
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  + + +S +G SP +ITYNT+ID   K G+   A  + + M  + + PD  TY+ L+ 
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GLSREG V+      +E    G+R   VT+N ++  LCK  ++ +A+  L  ++ + +  
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL--VYMINRGC 550

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           K P   +Y +LI+G   +G  ++A  LLNEL  KGL+   +  Q+ 
Sbjct: 551 K-PTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQVA 595



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 183/333 (54%), Gaps = 9/333 (2%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           L  L + G+L +    +E+M   G  P ++    LI G+C+   +GK  KA  + + +  
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR---MGKTRKAAKILEVLEG 165

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G +P+ +T+N +I G+CK   I+ A+ V + M    ++  VVTYN+++  LC  GKL +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ + D M+     P+V+T   LI   C+   V +A  L D++ ++G +P V+TYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CKEGR+++A    N M   G  P+V T+N ++  +   G       ++ +++  G   
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VT+NIL+  LC+ G   +A+ +L+   KM K    PN ++YN L+ GFC++ K++ A 
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILE---KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             L  ++ +G  P+  TY  +   + + G + D
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 18/314 (5%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF--KDMVENGILPNEVTFNTLIDGF 269
           ++S G++ +   ++ L  G+    G G    A++ F  +D+  N  L   V    L +GF
Sbjct: 63  VESSGLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGF 122

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                     K  E M  HG    ++   +LI G C  GK  +A  + + +  SG  P+V
Sbjct: 123 ----------KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T N +I+G+CK   +  A  + D +S   +SP V+TYNT++ + C  G+++ A  + + 
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML R   PDV TY  LI    R+  V     +++E+ + G    +VTYN+LV  +CK+G+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+  L++M         PN++T+N++++  C  G+  DA  LL ++L KG  P+  T
Sbjct: 290 LDEAIKFLNDM---PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 510 YQIVREEMMEKGFI 523
           + I+   +  KG +
Sbjct: 347 FNILINFLCRKGLL 360



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V  N+ +  L   G+L+E     + M+  G  P+++    LI GFC+     KA  + + 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREG 413
           +   G  P VITYN +I  YCK G + +A     S+LDR  V PDV TYN ++  L   G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSG 218

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    +++ ++       ++TY IL+ A C+D    +A+ LLDEM         P++V
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM---RDRGCTPDVV 275

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           TYNVL+ G C++G+L++A   LN++   G  PN  T+ I+   M   G   D E
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 207/376 (55%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    + K+M++ +IE ++  +N +++GLCK   ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+ P V TY+ LI   C     G+   A  +  DM+E  I PN VTF+ L
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCN---YGRWSDASRLLSDMIERKINPNVVTFSAL 334

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT + LI GFCK K VE+   LF ++S++GL  + +TY TLI  + +    ++A  
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV P++ TYN L+ GL + G +     +   L  + M   + TYNI++  +C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   PN++ YN +I GFC+KG  E+A+ LL ++ E G +P
Sbjct: 515 KAGKVEDGWELF---CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571

Query: 506 NQTTYQIVREEMMEKG 521
           N  TY  +    +  G
Sbjct: 572 NSGTYNTLIRARLRDG 587



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 213/401 (53%), Gaps = 26/401 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+ K  KFE V  + ++M+   I  +L +++  +N  C+  +L+ A  ++
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+  TF TLI G 
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRIS---DAVALVDQMVEMGYKPDTFTFTTLIHGL 198

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + ++M   G    +VTY +++NGLC  G +D A++L  +M    ++ +V
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+G CK K ++ A  LF ++  +G+ P V TY++LI   C  GR  DA  + + 
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++R + P+V T++ LI    +EG +     + +E++   +   + TY+ L+   C   +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378

Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A      MF++   K  +PN+VTY+ LIKGFC+  ++E+   L  E+ ++GL+ N  
Sbjct: 379 LDEA----KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 509 TY----------------QIVREEMMEKGFIPDIEGHMYNI 533
           TY                Q+V ++M+  G  P+I    YNI
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI--LTYNI 473



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 193/348 (55%), Gaps = 6/348 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K +D   ++ +M + R   ++  FN +L+ + K  K      + E M++LG+S  + TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I I+ +C++    ++  A AV   M++ G  P+ VT ++L++G+C  + IS A+ + ++M
Sbjct: 123 IFINCFCRRS---QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G      T+ +LI+GL +  K  EAVAL D+M+  G +P++VT   ++NG CK+  +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           + A  L   + +  +   V+ YNT+ID  CK   M+DA  +   M ++G+ PDV TY+ L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I+ L   G       ++++++   +   +VT++ L+ A  K+GK  +A  L DEM K   
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +   P+I TY+ LI GFC   +L++A  +   ++ K   PN  TY  +
Sbjct: 360 D---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 15/462 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L    K  KF  V ++   + T   S  L   SI I+   
Sbjct: 70  LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN--- 126

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +  L      +    G +  +++ + LL       +  D   +  +M     +
Sbjct: 127 -CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  +F  +++GL    K ++A  +++ M   G  P +VTY  +++G CK+G I     A
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL---A 242

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
            ++ K M +  I  + V +NT+IDG CK +++  A+ +F EM + GI   V TY+SLI+ 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G+  +A  L  +M+   + PNVVT +ALI+ F K+  + +A  L+D++ ++ + P 
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           + TY++LI+ +C   R+++A  M   M+ +   P+V TY+ LI G  +   VE    +  
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+   G+    VTY  L+    +      A  +  +M  +      PNI+TYN+L+ G C
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH---PNILTYNILLDGLC 479

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + GKL  A  +   L    + P+  TY I+ E M + G + D
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 179/322 (55%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++  V + + L+  L   G++ D   +  +M  R+I  N+ +F+ +++   K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P + TY+ LI+G+C      ++ +A  +F+ M+     PN
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 397

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT++TLI GFCK + +   M++F EM   G+    VTY +LI+G       D A  +  
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M++ G+ PN++T N L++G CK   + KA V+F+ +    + P + TYN +I+  CK G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  ++  +GV P+V  YN +I+G  R+G+ E   +++ ++  +G      TYN
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG  + +  L+ EM
Sbjct: 578 TLIRARLRDGDREASAELIKEM 599



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 186/312 (59%), Gaps = 6/312 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTY+ LI G+CK     ++ +   +F++M + G++ N VT+ TLI
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GF +  +   A  VF++M S G+   ++TYN L++GLC +GKL +A+ + + +  S ++
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++ T N +I G CK   VE    LF ++S +G+SP+VI YNT+I  +C++G  E+A ++
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+  TYN LI    R+G+ E    ++ E+ + G  AG  +   LV  +  
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLH 619

Query: 447 DGKSKKAVSLLD 458
           DG+  K  S LD
Sbjct: 620 DGRLDK--SFLD 629



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 155/286 (54%), Gaps = 5/286 (1%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DAV  F DMV++   P+ V FN L+    K       + + E+M + GI+  + TY+  I
Sbjct: 66  DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K +  A  L D + E G  
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   T+ TLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++   ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + ++    + A +V YN ++  LCK      A++L  EM   + +   P++ TY+ LI  
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM---DNKGIRPDVFTYSSLISC 302

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C  G+  DA+ LL++++E+ + PN  T+  + +  +++G + + E
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 13/175 (7%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLM 123
           +   +V    +P I ++   L    KNGK      +F  L  ST    +   +I+I+   
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE--- 511

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K  K   G+E F      G+  +V++ N ++    ++G  E+ + + K+MK     
Sbjct: 512 -GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY----NILIDGYCKK 234
            N  ++N ++    + G    +++++++M+S G +    T     N+L DG   K
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 625


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/361 (34%), Positives = 204/361 (56%), Gaps = 9/361 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V S N LL+ L   G+ ED   ++ EM       ++ ++  +++G C  G+L  A  ++
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           +DM + GV P    Y  ++   C KG   ++  A  V +DMV + ++ +E  + T++ GF
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKG---RVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C   ++ +A + F+EM   G+A   VTY +LINGLC  G+L EA  +  EM+A  L  + 
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   L++G+CK+  + +A  + + + ++G++P+V+TY  L D  CK+G ++ A  + + 
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M ++G+  +  TYN LI GL + G ++     M ++   G++  + TY  L+ ALCK G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  LL EM         P IVTYNVL+ GFC  G++E    LL  +LEK + PN TT
Sbjct: 555 LDRAHDLLQEML---DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611

Query: 510 Y 510
           Y
Sbjct: 612 Y 612



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 196/379 (51%), Gaps = 7/379 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +      ++  L  +G+  D   V ++M   ++ L+   +  VL+G C  G L  A
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSA 383

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               ++M+  G++   VTY  LI+G C+    G++ +A+ V ++M+   +  +EVT+  L
Sbjct: 384 RRWFDEMQRKGLATDGVTYTTLINGLCRA---GELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG+CK   ++ A +V   M   G+A  VVTY +L +GLC  G +  A  L  EM   GL
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + N  T N+LING CK   +++A     D+   GL P V TY TLIDA CK G ++ A  
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   MLD G+ P + TYN L+ G    G VEG + ++  ++   +     TYN L+   C
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC 620

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                K    +   M     E   PN  TYN+LIKG C+   +++A    NE++EKG   
Sbjct: 621 IGNNMKSTTEIYKGMCSRNVE---PNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 506 NQTTYQ-IVREEMMEKGFI 523
             ++Y  ++R    +K F+
Sbjct: 678 TASSYSALIRLLNKKKKFV 696



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           +L     +G        + EM+R+ +  +  ++  ++NGLC+AG+L +A  ++++M +  
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +    VTY +L+DGYCK+G   KM +A  V   MV+ G+ PN VT+  L DG CK  ++ 
Sbjct: 430 LDVDEVTYTVLVDGYCKRG---KMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA ++  EM + G+     TYNSLINGLC  G LD+A+    +M A+GLKP+V T   LI
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +  CK   +++A  L  ++ + G+ P+++TYN L++ +C  GR+E    +   ML++ + 
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ +TYN L+       N++    I   + +  +     TYNIL+   CK    K+A   
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +EM  +EK  +     +Y+ LI+   +K K  +A  L +++ ++G       Y
Sbjct: 667 HNEM--IEKGFRL-TASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 192/359 (53%), Gaps = 6/359 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL +  ++   L+  L + G+ ++ E V +EM  RR++++  ++  +++G CK GK+ +A
Sbjct: 394 GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEA 453

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   GV+P VVTY  L DG CK+G +     A+ +  +M   G+  N  T+N+L
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDV---QAANELLHEMSNKGLELNACTYNSL 510

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK   +  AM+   +M + G+   V TY +LI+ LC  G+LD A  L  EM+ +G+
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP +VT N L+NGFC    VE  + L + + E+ + P+  TYN+L+  YC    M+    
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  R V P+ +TYN LI G  +  +++  +   NE++  G R    +Y+ L+  L 
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLN 690

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K  K  +A  L  +M K E     P++  YN  I     +  LE    L +EL+E  ++
Sbjct: 691 KKKKFVEARKLFHDMRK-EGFTAEPDV--YNFYIDFNFNEDNLEATLALCDELVEASIV 746



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 3/312 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +   +L+  Y K  K    F+        G+  +V++   L   L K+G  +    + 
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +ELN  ++N ++NGLCKAG L++A   M DM + G+ P V TY  LID  CK 
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   ++ +A  + ++M++NGI P  VT+N L++GFC    +    K+ E M    I    
Sbjct: 553 G---ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYNSL+   C+   +     +   M +  ++PN  T N LI G CK + +++A+   ++
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNE 669

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G   +  +Y+ LI    K+ +  +A  + + M   G   +   YN  I     E N
Sbjct: 670 MIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDN 729

Query: 415 VEGVRNIMNELV 426
           +E    + +ELV
Sbjct: 730 LEATLALCDELV 741



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 6/266 (2%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  ++N L+   C    +  A ++F+EM S      VVTY  LI+G C  G+L+ AV L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D+M+A G++PN     +++   C K  V  A  + +D+    +      Y T++  +C +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +  A    + M  +G+  D  TY  LI GL R G ++    ++ E++   +    VTY
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
            +LV   CK GK  +A  + + M +       PN+VTY  L  G C++G ++ AN LL+E
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQ---RGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFI 523
           +  KGL  N  TY  +   + + G++
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYL 520



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+    NA+++     + +E    LF  + ++    +V +YN L+   C  GR+EDA
Sbjct: 230 GISPSPEACNAVLSRLPLDEAIE----LFQGLPDK----NVCSYNILLKVLCGAGRVEDA 281

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PDV TY  LI G    G +E    +++++V  G+      Y  +V  
Sbjct: 282 RQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC  G+   A++++++M      K   +   Y  ++ GFC KG L  A    +E+  KGL
Sbjct: 339 LCDKGRVSDALTVVEDMVH---HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL 395

Query: 504 IPNQTTYQIVREEMMEKGFIPDIE 527
             +  TY  +   +   G + + E
Sbjct: 396 ATDGVTYTTLINGLCRAGELKEAE 419


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 221/429 (51%), Gaps = 50/429 (11%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   ++ + N +L  L K G F++   V++ M     + ++ ++  +++GLC++  ++
Sbjct: 258 DPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVD 317

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------ADAVFK 248
            A+ +  +M   G+ P VV YN L+ G+C  G +G+ +K                + + K
Sbjct: 318 SAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLK 377

Query: 249 DMVENGIL-----------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            + + G++                 P+ VTF+T+I G C+    + ++++ EE  + G  
Sbjct: 378 GLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKE 437

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               +Y+S+I+GLC DG+LD+AV L +++     KPN    NALINGFC+      A  +
Sbjct: 438 LDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRV 497

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +  ++E   SP+ ITYNTLI   CK  +  +A      ML++G + DV+TY  LI GL R
Sbjct: 498 YSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCR 557

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           +  ++G   + N++++ G++  +V +NIL+  LC  GK  +A  LL EM   EK    PN
Sbjct: 558 DKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEM--KEKNNCCPN 615

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
           +VTYN L+ GF + G  + A  L   +LE GL+P+  +Y                  +  
Sbjct: 616 VVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLN 675

Query: 516 EMMEKGFIP 524
           EM+  G IP
Sbjct: 676 EMLASGIIP 684



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 222/472 (47%), Gaps = 63/472 (13%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           +++ A+ + + P     AF+R   + G    V S N LL A V+  +F D +  +  +  
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 180 ----RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
               RRI  NL ++N +L  LC  G L++A  + + ++  G++P  +TY+ L+ G+ K  
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN- 207

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGV 294
              ++  A  +  +M    + P+ V +N L+ G  ++     AM+V+E++    G +  +
Sbjct: 208 --NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNL 265

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN +++GLC  G   EA  + + M+A+  +P+++T   +I+G C+   V+ A  ++ +
Sbjct: 266 ATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSE 325

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM------------------LDRGVL 396
           + + GL P V+ YN+L+  +C  GR+ +A+   +SM                   D G++
Sbjct: 326 MIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMV 385

Query: 397 -----------------PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
                            PD+ T++ +I GL  +G       I+ E   +G      +Y+ 
Sbjct: 386 DKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSS 445

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++  LCKDG+   AV L  E   M+  K  PN   YN LI GFCQ  K  DA  + +++ 
Sbjct: 446 MISGLCKDGRLDDAVKLY-EKISMDSFK--PNSHIYNALINGFCQASKFSDAIRVYSQMA 502

Query: 500 EKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
           E    P   TY  +                  EM+EKG + D+  +   I G
Sbjct: 503 ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 215/458 (46%), Gaps = 14/458 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L H     +  P ++++   L      G      T+F +L      L  + I    LM  
Sbjct: 146 LSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRC--RGLAPDRITYSTLMSG 203

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IEL 184
           +VKN +             Y ++   +  N LL    + G+FE    V++++ R      
Sbjct: 204 FVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASP 263

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           NL ++N +L+GLCK G   +A D+ E M +    P ++TY  +I G C+   +     A 
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDS---AA 320

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V+ +M++ G++P+ V +N+L+ GFC    +  A K ++ M   GI   V +YN ++ GL
Sbjct: 321 RVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGL 379

Query: 305 CVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
              G +D+A  L + +     L P++VT + +I+G C+K    K+  + ++    G    
Sbjct: 380 FDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             +Y+++I   CK+GR++DA  +   +      P+   YN LI G  +         + +
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  N      +TYN L+  LCK  K  +A     EM  +EK     ++ TY  LI+G C
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREM--LEKGCML-DVNTYGSLIRGLC 556

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  K++ A  L N++L+KGL  +   + I+   +   G
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAG 594



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 172/307 (56%), Gaps = 6/307 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  L   +++ + ++  L ++G       + +E +    EL+  S++ +++GLCK G+L+
Sbjct: 398 DDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLD 457

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  + E +      P    YN LI+G+C+     K   A  V+  M EN   P  +T+N
Sbjct: 458 DAVKLYEKISMDSFKPNSHIYNALINGFCQAS---KFSDAIRVYSQMAENDCSPTTITYN 514

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI G CK E    A +   EM   G    V TY SLI GLC D K+D A+AL ++++  
Sbjct: 515 TLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDK 574

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMED 382
           GL+ +VV  N LI+G C    V++A  L  ++ E+    P+V+TYNTL+D + + G  + 
Sbjct: 575 GLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDK 634

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGL-SREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           A ++  ++L+ G++PD+ +YN  I GL S     EGV+ ++NE++ +G+    +T+NILV
Sbjct: 635 AASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ-LLNEMLASGIIPTAITWNILV 693

Query: 442 GALCKDG 448
            A+ K G
Sbjct: 694 RAVIKYG 700



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 143/266 (53%), Gaps = 4/266 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S + ++  L K+G+ +D   +Y+++     + N   +N ++NG C+A K + A  +   
Sbjct: 441 FSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQ 500

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M     SP  +TYN LI G CK     K  +A    ++M+E G + +  T+ +LI G C+
Sbjct: 501 MAENDCSPTTITYNTLIHGLCKAE---KYLEASRFTREMLEKGCMLDVNTYGSLIRGLCR 557

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKPNVV 330
           D+ I  A+ ++ ++   G+   VV +N LI+GLC  GK+DEA  L  EM   +   PNVV
Sbjct: 558 DKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVV 617

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L++GF +    +KA  L+  I E GL P +I+YNT I   C   R  +   + N M
Sbjct: 618 TYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEM 677

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVE 416
           L  G++P   T+N L+  + + G ++
Sbjct: 678 LASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 17/271 (6%)

Query: 254 GILP--------NEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGL 304
           GILP        +E     ++  F +     AA+  F  + S  G   GV ++N+L++  
Sbjct: 71  GILPRLRHRPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAF 130

Query: 305 CVDGKLDEA----VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
               +  +A     +L        + PN+ T N ++   C +  +++A  LFD +  +GL
Sbjct: 131 VRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGL 190

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P  ITY+TL+  + K  R+++A  + + M    V PD   YN L+ G  R G  E    
Sbjct: 191 APDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMR 250

Query: 421 IMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +  +LV + G    L TYN+++  LCK G  K+A  + + M     +   P+++TY  +I
Sbjct: 251 VWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ---PDMITYGTMI 307

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            G C+   ++ A  + +E+++ GL+P+   Y
Sbjct: 308 HGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 14/263 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +    K+G+      ++  +S   DS   NS I + L+  + +  K       + +  
Sbjct: 445 SMISGLCKDGRLDDAVKLYEKISM--DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMA 502

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +     + ++ N L+  L K  K+ +     +EM  +   L+++++  ++ GLC+  K++
Sbjct: 503 ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKID 562

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTF 262
            A  +   +   G+   VV +NILI G C  G   K+ +A  +  +M E N   PN VT+
Sbjct: 563 GALALWNQILDKGLQTDVVMHNILIHGLCSAG---KVDEASQLLSEMKEKNNCCPNVVTY 619

Query: 263 NTLIDGF----CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           NTL+DGF    C D+  S  M + E    +G+   +++YN+ I GLC   +  E V L +
Sbjct: 620 NTLMDGFYETGCFDKAASLWMAILE----NGLVPDIISYNTRIKGLCSCNRTPEGVQLLN 675

Query: 319 EMMASGLKPNVVTSNALINGFCK 341
           EM+ASG+ P  +T N L+    K
Sbjct: 676 EMLASGIIPTAITWNILVRAVIK 698


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 213/382 (55%), Gaps = 9/382 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V+  + LL+   K G++EDV  V+ EM  + IE ++  +  +++ LCK GK  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +M+ M   G+ P VVTYN+LI+  CK+G +    +A  V K M E G+ P+ VT+N
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSV---KEAIGVLKKMSEKGVAPDVVTYN 294

Query: 264 TLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           TLI G      +  AM + EEM  G + +   VVT+NS+I GLC  G++ +A  +R  M 
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G   N+VT N LI G  +   V KA  L D+++  GL P   TY+ LI  +CK  +++
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + ++M DRG+ P++  Y  L+  +  +G +E  RN+ NE+ NN     +V Y+ ++
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMI 473

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK G  K A  LL  +     E   P+ VTY+++I  F + G +E ANG+L ++   
Sbjct: 474 HGACKAGDLKTAKELLKSIV---DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 502 GLIPNQTTYQIVREEMMEKGFI 523
           G +P+   +  + +    KG I
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEI 552



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 235/478 (49%), Gaps = 28/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYV 127
           LL +L   +      + L    + G       +  A+S      CR N++   +LM A  
Sbjct: 67  LLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC 126

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            +          +     G+++ V++   L+R L    + +    +  EM    IE N+ 
Sbjct: 127 ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVV 186

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            ++ +L G CK+G+      +  +M   G+ P VV Y  LID  CK   +GK  KA  V 
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK---VGKAKKAHGVM 243

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV  G+ PN VT+N LI+  CK+ ++  A+ V ++M   G+A  VVTYN+LI GL   
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303

Query: 308 GKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            ++DEA+ L +EM+     +KPNVVT N++I G C    + +A  +   + E G   +++
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN LI    +  ++  A  + + M   G+ PD  TY+ LI G  +   V+   ++++ +
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G+   L  Y  L+ A+C+ G  ++A +L +EM     +  +P ++V Y+ +I G C+
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-----DNNFPLDVVAYSTMIHGACK 478

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
            G L+ A  LL  ++++GL P+  TY I                V ++M   GF+PD+
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 209/398 (52%), Gaps = 9/398 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +  N ++   L+  Y K+ +     + F    + G++  V+    L+ +L K GK 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    V   M RR +E N+ ++N ++N +CK G + +A  +++ M   GV+P VVTYN L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 228 IDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I G      + +M +A  + ++MV  +N + PN VTFN++I G C    +  A +V   M
Sbjct: 297 IKGLSD---VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    +VTYN LI GL    K+ +A+ L DEM + GL+P+  T + LI GFCK   V
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++A  L   + ++G+ P +  Y  L+ A C++G ME A  + N M D     DV  Y+ +
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTM 472

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G  + G+++  + ++  +V+ G+    VTY+I++    K G  + A  +L +   M  
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQ---MTA 529

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
               P++  ++ LI+G+  KG++     L+ E++ K +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 176/315 (55%), Gaps = 10/315 (3%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV---ENGILPN 258
           L +A+ +++ + S+      V+YN ++   C++G      +A A+ + M         PN
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRG---HHDRAGALLRAMSLEPHPACRPN 114

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V++  L+   C D     A+ +   M S G+ A VVTY +LI GLC   ++D+AV L  
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM  SG++PNVV  ++L+ G+CK    E    +F ++SE+G+ P V+ Y  LID+ CK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           + + A  + + M+ RG+ P+V TYN LI  + +EG+V+    ++ ++   G+   +VTYN
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L    +  +A+ LL+EM + +   K PN+VT+N +I+G C  G++  A  +   +
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVK-PNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 499 LEKGLIPNQTTYQIV 513
            E G + N  TY ++
Sbjct: 354 EETGCMVNLVTYNLL 368



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 184/367 (50%), Gaps = 25/367 (6%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           ++ TG L+ SL    K  K    + M V+ G   +V T ++ L  C   +C+        
Sbjct: 221 VMYTG-LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT-YNVLINC---MCKEG------ 269

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR- 181
                 ++K  +G    K+  + G+   V++ N L++ L    + ++  ++ +EM R + 
Sbjct: 270 ------SVKEAIGV--LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321

Query: 182 -IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            ++ N+ +FN V+ GLC  G++ +A  +   M+  G    +VTYN+LI G  +   + K+
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR---VHKV 378

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA  +  +M   G+ P+  T++ LI GFCK   +  A  +   M   GI   +  Y  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  +C  G ++ A  L +EM  +    +VV  + +I+G CK   ++ A+ L   I ++GL
Sbjct: 439 LVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P  +TY+ +I+ + K G ME A  +   M   G LPDV+ ++ LI G S +G +  V  
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 421 IMNELVN 427
           ++ E++ 
Sbjct: 558 LIREMIT 564



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 31/250 (12%)

Query: 310 LDEAVALRDEMMASGLKPNV---VTSNALINGFCKKKLVEKARVLFDDIS---EQGLSPS 363
           L EA +L D +      P+V   V+ N ++   C++   ++A  L   +S        P+
Sbjct: 61  LGEATSLLDAL------PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPN 114

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            ++Y  L+ A C +   + A  +  SM   GV  DV TY  LI GL     V+    +M 
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+  +G+   +V Y+ L+   CK G+ +    +  EM +   E   P++V Y  LI   C
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIE---PDVVMYTGLIDSLC 231

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
           + GK + A+G+++ ++ +GL PN  TY +                V ++M EKG  PD+ 
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 528 GHMYNISGTS 537
            +   I G S
Sbjct: 292 TYNTLIKGLS 301


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 247/484 (51%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLM 123
           R+L  ++    YP  R   S +H + ++G ++    +   +  C    C+   ++ ++L+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG---CQPGYVVYNILI 411

Query: 124 LAYVKNMK-P-----HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
                N K P      L  +A+    D  +  + ++ + L R L   GKFE    + +EM
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             +    +  +++ V+  LC A K++ A  + E+MKS  V P V TY ILID +CK   +
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK---V 528

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G + +A   F +MV +G  PN VT+  LI  + K   +S+A ++FE M S G    VVTY
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASG----------------LKPNVVTSNALINGFCK 341
            +LI+G C  G++++A  +   M  +                   PN+ T  AL++G CK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++AR L D +S +G  P+ I Y+ LID +CK G++++A  +   M +RG  P+V T
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++    +++ ++ N     ++ Y  ++  LCK GK+ +A  L   M 
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL---MS 765

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ME++   PN+VTY  +I GF + GK++    L+ ++  KG  PN  TY+++       G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 522 FIPD 525
            + D
Sbjct: 826 LLDD 829



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 195/385 (50%), Gaps = 20/385 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+ +  K G  +     + EM R     N+ ++  +++   KA K++ A+++ E
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK--------ADAVFKDM---VENGIL--P 257
            M S G  P VVTY  LIDG+CK G I K  +        AD    DM   +++G +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+  L+DG CK   +  A  + + M   G     + Y++LI+G C  GKLDEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G  PNV T ++LI+   K K ++ A  +   + E   +P+VI Y  +ID  CK 
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+ ++A+ + + M ++G  P+V TY  +I G  + G V+    +M ++   G     VTY
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLN 496
            +L+   C  G    A  LLDEM    K+  WP ++  Y  +I+GF ++  +  + GLL+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM----KQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
           E+ E   +P    Y+I+ +   + G
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAG 893



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 181/383 (47%), Gaps = 38/383 (9%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  +  C ++L  ++ EG +            RRI      FN +++  C++G  + A  
Sbjct: 347 KRQLGRCKRILSMMITEGCYPS----------RRI------FNSLIHAYCRSGDYSYAYK 390

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYC---KKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +++ M   G  P  V YNILI G C   K   +  +  A+  + +M++  ++ N+V  + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L    C       A  +  EM S G      TY+ +I  LC   K+D A  L +EM ++ 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+V T   LI+ FCK  L+++AR  FD++   G +P+V+TY  LI AY K  +M  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--------------- 429
            +   ML  G +P+V TY  LI G  + G +E    I   +  N                
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 430 -MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
                + TY  LV  LCK  K K+A  LLD    M  E   PN + Y+ LI GFC+ GKL
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLD---VMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 489 EDANGLLNELLEKGLIPNQTTYQ 511
           ++A  +  ++ E+G  PN  TY 
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYS 710



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 249/598 (41%), Gaps = 123/598 (20%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           T+++ + +   +P L +++F W+ +++   H    TG + H+L+              F+
Sbjct: 130 TLVVDVLSLVKNPELGVKFFIWAGRQIGYGH----TGPVYHALLEVLGCGGNDRVPEQFL 185

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           +  +      +   L+      CRN +               ++  E   R  D G K S
Sbjct: 186 REIRDEDKEILGKLLNVLIRKCCRNGLW--------------NVALEELGRLKDLGYKPS 231

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKR------------------------------R 180
            L+ N L+R  ++  + +    V++EM                                 
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE 291

Query: 181 RIELNLDS--FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           + E  LD+  +  +++GLC+A    +A D +  M+S    P VVTY IL+ G  +K  +G
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +  +   +   M+  G  P+   FN+LI  +C+  + S A K+ ++MG  G   G V YN
Sbjct: 352 RCKR---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408

Query: 299 SLINGLCVD-----------------------------------------GKLDEAVALR 317
            LI G+C +                                         GK ++A ++ 
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EMM+ G  P+  T + +I   C    V+ A +LF+++    + P V TY  LID++CK 
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A    + M+  G  P+V TY  LI    +   +     +   +++ G    +VTY
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 438 NILVGALCKDGKSKKAVSL------------LDEMFKMEKEK-KWPNIVTYNVLIKGFCQ 484
             L+   CK G+ +KA  +            +D  FK++    + PNI TY  L+ G C+
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
             K+++A  LL+ +  +G  PN   Y                Q+V  +M E+G+ P++
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 7/294 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+    K GK ++ + V+ +M  R    N+ +++ +++ L K  +L+ A  ++  M  
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              +P V+ Y  +IDG CK   +GK  +A  +   M E G  PN VT+  +IDGF K   
Sbjct: 735 NSCAPNVIIYTEMIDGLCK---VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +++  +MG+ G A   VTY  LIN  C  G LD+A  L DEM  +    ++     
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM--LD 392
           +I GF ++ ++     L D+I+E    P +  Y  LID++CK GR+E A  +   M    
Sbjct: 852 VIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCT 909

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
                D   Y+ LI  LS    V+    +  +++  G    L  +  LV  L +
Sbjct: 910 SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 238/493 (48%), Gaps = 25/493 (5%)

Query: 34  LQLFNSDADPVLILRYFCWSTKELRASHSLLLTG----------RLLHSLVVAKKYPKIR 83
           LQ+ N      L L  FC+  +   +   +L  G           L   +V ++  P I 
Sbjct: 25  LQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSII 84

Query: 84  SF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
            F   L +  K  ++  V ++F  +        LC  +I++  + L+     +P      
Sbjct: 85  DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLS----SQPCRASCF 140

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
             +    G +  +++   LL       + ED   ++ ++     + N+ ++  ++  LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
              LN A ++   M + G  P VVTYN L+ G C+   IG+   A  + +DM++  I PN
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE---IGRWGDAAWLLRDMMKRRIEPN 257

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TF  LID F K   +  A +++  M    +   V TY SLINGLC+ G LDEA  +  
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  +G  PN V    LI+GFCK K VE    +F ++S++G+  + ITY  LI  YC  G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R + A  + N M  R   PD+ TYN L+ GL   G VE    I   +    M   +VTY 
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           I++  +CK GK + A  L   +F   K  K PN++TY  +I GFC++G + +A+ L  ++
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLF--SKGMK-PNVITYTTMISGFCRRGLIHEADSLFKKM 494

Query: 499 LEKGLIPNQTTYQ 511
            E G +PN++ Y+
Sbjct: 495 KEDGFLPNESVYK 507



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 220/436 (50%), Gaps = 41/436 (9%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           + N++ +   + F R        S++   +LL  + K  +++ V  ++++M+   I   L
Sbjct: 59  LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            + N V++ +C + +  +AS  +  M  LG  P +VT+  L++GYC      ++  A A+
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN---RIEDAIAL 175

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  ++  G  PN VT+ TLI   CK+ +++ A+++F +MG++G    VVTYN+L+ GLC 
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALI------------------------------ 336
            G+  +A  L  +MM   ++PNV+T  ALI                              
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295

Query: 337 -----NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
                NG C   L+++AR +F  +   G  P+ + Y TLI  +CK  R+ED   +   M 
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +GV+ +  TY  LI G    G  +  + + N++ +      + TYN+L+  LC +GK +
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           KA+ + + M K E +    NIVTY ++I+G C+ GK+EDA  L   L  KG+ PN  TY 
Sbjct: 416 KALMIFEYMRKREMDI---NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472

Query: 512 IVREEMMEKGFIPDIE 527
            +      +G I + +
Sbjct: 473 TMISGFCRRGLIHEAD 488


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 247/484 (51%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLM 123
           R+L  ++    YP  R   S +H + ++G ++    +   +  C    C+   ++ ++L+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG---CQPGYVVYNILI 411

Query: 124 LAYVKNMK-P-----HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
                N K P      L  +A+    D  +  + ++ + L R L   GKFE    + +EM
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             +    +  +++ V+  LC A K++ A  + E+MKS  V P V TY ILID +CK   +
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK---V 528

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G + +A   F +MV +G  PN VT+  LI  + K   +S+A ++FE M S G    VVTY
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASG----------------LKPNVVTSNALINGFCK 341
            +LI+G C  G++++A  +   M  +                   PN+ T  AL++G CK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++AR L D +S +G  P+ I Y+ LID +CK G++++A  +   M +RG  P+V T
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++    +++ ++ N     ++ Y  ++  LCK GK+ +A  L   M 
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL---MS 765

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ME++   PN+VTY  +I GF + GK++    L+ ++  KG  PN  TY+++       G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 522 FIPD 525
            + D
Sbjct: 826 LLDD 829



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 195/385 (50%), Gaps = 20/385 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+ +  K G  +     + EM R     N+ ++  +++   KA K++ A+++ E
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK--------ADAVFKDM---VENGIL--P 257
            M S G  P VVTY  LIDG+CK G I K  +        AD    DM   +++G +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+  L+DG CK   +  A  + + M   G     + Y++LI+G C  GKLDEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G  PNV T ++LI+   K K ++ A  +   + E   +P+VI Y  +ID  CK 
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+ ++A+ + + M ++G  P+V TY  +I G  + G V+    +M ++   G     VTY
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLN 496
            +L+   C  G    A  LLDEM    K+  WP ++  Y  +I+GF ++  +  + GLL+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM----KQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
           E+ E   +P    Y+I+ +   + G
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAG 893



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 181/382 (47%), Gaps = 38/382 (9%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  +  C ++L  ++ EG +            RRI      FN +++  C++G  + A  
Sbjct: 347 KRQLGRCKRILSMMITEGCYPS----------RRI------FNSLIHAYCRSGDYSYAYK 390

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYC---KKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +++ M   G  P  V YNILI G C   K   +  +  A+  + +M++  ++ N+V  + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L    C       A  +  EM S G      TY+ +I  LC   K+D A  L +EM ++ 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+V T   LI+ FCK  L+++AR  FD++   G +P+V+TY  LI AY K  +M  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--------------- 429
            +   ML  G +P+V TY  LI G  + G +E    I   +  N                
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 430 -MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
                + TY  LV  LCK  K K+A  LLD    M  E   PN + Y+ LI GFC+ GKL
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLD---VMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           ++A  +  ++ E+G  PN  TY
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTY 709



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 249/598 (41%), Gaps = 123/598 (20%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           T+++ + +   +P L +++F W+ +++   H    TG + H+L+              F+
Sbjct: 130 TLVVDVLSLVKNPELGVKFFIWAGRQIGYGH----TGPVYHALLEVLGCGGNDRVPEQFL 185

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           +  +      +   L+      CRN +               ++  E   R  D G K S
Sbjct: 186 REIRDEDKEILGKLLNVLIRKCCRNGLW--------------NVALEELGRLKDLGYKPS 231

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKR------------------------------R 180
            L+ N L+R  ++  + +    V++EM                                 
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE 291

Query: 181 RIELNLDS--FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           + E  LD+  +  +++GLC+A    +A D +  M+S    P VVTY IL+ G  +K  +G
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +  +   +   M+  G  P+   FN+LI  +C+  + S A K+ ++MG  G   G V YN
Sbjct: 352 RCKR---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408

Query: 299 SLINGLCVD-----------------------------------------GKLDEAVALR 317
            LI G+C +                                         GK ++A ++ 
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EMM+ G  P+  T + +I   C    V+ A +LF+++    + P V TY  LID++CK 
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A    + M+  G  P+V TY  LI    +   +     +   +++ G    +VTY
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 438 NILVGALCKDGKSKKAVSL------------LDEMFKMEKEK-KWPNIVTYNVLIKGFCQ 484
             L+   CK G+ +KA  +            +D  FK++    + PNI TY  L+ G C+
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
             K+++A  LL+ +  +G  PN   Y                Q+V  +M E+G+ P++
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 7/311 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+    K GK ++ + V+ +M  R    N+ +++ +++ L K  +L+ A  ++  M  
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              +P V+ Y  +IDG CK   +GK  +A  +   M E G  PN VT+  +IDGF K   
Sbjct: 735 NSCAPNVIIYTEMIDGLCK---VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +++  +MG+ G A   VTY  LIN  C  G LD+A  L DEM  +    ++     
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM--LD 392
           +I GF ++ ++     L D+I+E    P +  Y  LID++CK GR+E A  +   M    
Sbjct: 852 VIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCT 909

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
                D   Y+ LI  LS    V+    +  +++  G    L  +  LV  L +  + ++
Sbjct: 910 SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEE 969

Query: 453 AVSLLDEMFKM 463
           A+ L D + +M
Sbjct: 970 ALQLSDCICQM 980


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 272/549 (49%), Gaps = 42/549 (7%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTK-----ELRASHSL---LLTGRLLHSL 73
           S L + +  TV L L N        L +F +  K     +LRA  +L   L   R    L
Sbjct: 47  SLLSSLNSQTVHLILSNHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKL 106

Query: 74  VVAKKYPKIRSFLHMF----VKNGKFTSVSTIFHALS-TCSDSLCRNSII----IDMLML 124
             ++K+ +IR   H+F    V +G    V+ I   +   C++S C  +       D+L  
Sbjct: 107 HKSQKFAEIR---HLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 163

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y  N       EAF+     G      SC   L AL + G+ +     ++ M    +E+
Sbjct: 164 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 223

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + S   VL+GLCK G +     +M+++ + GV   VVTYN  I+GY K+  +G + +  
Sbjct: 224 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-- 281

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   M + G+  N VT+  LI GF     I  A ++FEEM   GI A V  Y S+I+  
Sbjct: 282 -ILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G +  A+ L DEM   GL P+  T  ALI+G CK   +E A++L +++  +G+  + 
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           + +NTLID YC+ G +++A  ++  M  +G+  DV  YN + +GL +    +  + ++  
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 460

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V  G+    +++  L+   CK+G   +A  +  E   ME++   PNI+TYNVLI G+ +
Sbjct: 461 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE---MEEKGNVPNIITYNVLIDGYSK 517

Query: 485 KGKLEDANGLLNELLEKGLIPN-QTTYQIVR---------------EEMMEKGFIPDIEG 528
           +G +++A+ L +EL  +GLIP+  T   ++                +EM ++G +P++  
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577

Query: 529 HMYNISGTS 537
           +   ISG S
Sbjct: 578 YTAMISGLS 586



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 20/413 (4%)

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           V    ++L+   D LC+   +               +G +        G+K++V++ N  
Sbjct: 221 VEVTVYSLTIVLDGLCKRGDV--------------EMGRKLMDEVAAKGVKANVVTYNAF 266

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +    K      V  +   M++  +  N+ ++  +++G    GK+ +A  + E+M+  G+
Sbjct: 267 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 326

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
              V  Y  +I   C+ G + +   A  +F +M + G++P+  T+  LI G CK   + A
Sbjct: 327 EADVYVYTSIISCNCRSGNVKR---ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 383

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  +  EM   GI    V +N+LI+G C  G +DEA+ L+  M   GL+ +V   N++ +
Sbjct: 384 AQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS 443

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK    ++A+ L   + E+G+SP+ +++ TLID YCKEG   +A  +   M ++G +P
Sbjct: 444 GLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP 503

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           ++ TYN LI G S+ GN++    + +EL N G+   + T   L+   C DGK   A+ L 
Sbjct: 504 NIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLF 563

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           DEM    +    PN+VTY  +I G  + G+ E+A  L +E+ E GL P+ T Y
Sbjct: 564 DEM---PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 613



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D GL  S  +   L+  + K G+ E  + +  EM+ + I+LN   FN +++G C+
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           +G +++A  +   M+  G+   V  YN +  G CK   + +  +A  +   MVE G+ PN
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCK---LNRKDEAKGLLFSMVERGVSPN 469

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            ++F TLID +CK+ N   A +VF EM   G    ++TYN LI+G    G + EA  L+D
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 529

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           E+   GL P+V T  +LI+G C    V+ A  LFD++ ++GL P+V+TY  +I    K+G
Sbjct: 530 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 589

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           R E+AF + + M + G+ PD + Y+ L+  L
Sbjct: 590 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 38/334 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++   L+      GK E+ + +++EM+ + IE ++  +  +++  C++G + +A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M   G+ P   TY  LI G CK G   +M  A  +  +M   GI  N V FNTL
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAG---QMEAAQMLVNEMQGKGIDLNPVIFNTL 406

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+   +  A+++   M   G+ + V  YNS+ +GLC   + DEA  L   M+  G+
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466

Query: 326 KPN-----------------------------------VVTSNALINGFCKKKLVEKARV 350
            PN                                   ++T N LI+G+ K+  +++A  
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D++  +GL P V T  +LI   C +G+++ A  + + M  RG++P+V TY  +I+GLS
Sbjct: 527 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 586

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++G  E    + +E+   G+      Y+ LVG+L
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 222/449 (49%), Gaps = 70/449 (15%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E ++  G+YG++ +V + N +L +  K G+ +    +  +M+ R    +  +FN ++N
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------- 237
           GL K G+L +A  ++++M   G+     TYN LI GYCKKG +                 
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GKM  A     DM++  ++P+ +++NTLI GFC+  NI  A  + 
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +E+    ++  +VTYN+LI+GLC  G L+ A+ L+++M+  G+ P+VVT   L+NG CK 
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKL 460

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +  A+  FD++   GL+P    Y   I    K G    AF ++  ML +G  PDV TY
Sbjct: 461 GNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITY 520

Query: 403 NCLIAGLSREGNVEGV-----------------------------------RNIMNELVN 427
           N  + GL + GN+E                                     R I  ++++
Sbjct: 521 NVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLS 580

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    +VTY +L+ A   +G+   A++   E   M+++   PN++TYNVLI GFC+  K
Sbjct: 581 RGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE---MQEKGVVPNVITYNVLINGFCKVRK 637

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREE 516
           ++ A     E+ EKG+ PN+ TY I+  E
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINE 666



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 237/469 (50%), Gaps = 61/469 (13%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I+D+L+  Y+ N +  L FE   R         V +CN++L+ L  +        VY+ M
Sbjct: 173 IVDVLIGGYL-NYQCLLVFEKMMRNR---FLPDVKNCNRILKILRDKNLLVKALEVYRMM 228

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               I   + ++N +L+  CK G++ +A D++  M+  G  P  VT+N+LI+G  KKG  
Sbjct: 229 GEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKG-- 286

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            ++ +A  + ++M + G+  +  T+N LI G+CK   +  A+ ++EEM + G++  V ++
Sbjct: 287 -ELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH 345

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+++ G C +GK+ +A     +M+   L P++++ N LI GFC+   + +A +L D++  
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           + LS +++TYNTLID  C+ G +E A  ++  M++RG+ PDV TY  L+ G  + GN+  
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            +   +E+++ G+      Y   +    K G + KA  L +EM     +   P+++TYNV
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLT---KGFPPDVITYNV 522

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------VRE------------ 515
            + G C+ G LE+A  LL +++  G +P+  TY            +RE            
Sbjct: 523 FVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG 582

Query: 516 -----------------------------EMMEKGFIPDIEGHMYNISG 535
                                        EM EKG +P++  +   I+G
Sbjct: 583 QTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLING 631



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 177/334 (52%), Gaps = 6/334 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   ++S N L+    + G   +   +  E++ R +  N+ ++N +++GLC+ G L  A 
Sbjct: 373 LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETAL 432

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + EDM + G+ P VVTY +L++G CK   +G M  A   F +M+  G+ P++  +   I
Sbjct: 433 KLKEDMINRGIHPDVVTYTVLVNGACK---LGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  K  + + A K+ EEM + G    V+TYN  +NGLC  G L+EA  L  +M+  G  
Sbjct: 490 VGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV 549

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT  + ++   +   + + R +F D+  +G +P+V+TY  LI A+   GR++ A A 
Sbjct: 550 PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAY 609

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M ++GV+P+V TYN LI G  +   ++       E+   G+     TY IL+   C 
Sbjct: 610 FLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCN 669

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            GK ++A+ L  +M     ++  P+  T+  L+K
Sbjct: 670 MGKWQEALRLYAQML---GKRIRPDSCTHGALLK 700



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 39/321 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL---- 202
           L  ++++ N L+  L + G  E    + ++M  R I  ++ ++  ++NG CK G +    
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467

Query: 203 -------------------------------NKASDIMEDMKSLGVSPKVVTYNILIDGY 231
                                           KA  + E+M + G  P V+TYN+ ++G 
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   +G + +A  + + M+ +G +P+ VT+ + +    ++ ++    ++F +M S G  
Sbjct: 528 CK---LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             VVTY  LI+   ++G+LD A+A   EM   G+ PNV+T N LINGFCK + +++A   
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKF 644

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F ++ E+G+ P+  TY  LI+  C  G+ ++A  +   ML + + PD  T+  L+  L +
Sbjct: 645 FIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704

Query: 412 EGNVEGVRNIMNELVNNGMRA 432
           +  V+ V+ I   L+ +G R 
Sbjct: 705 DYKVQAVQFI-ESLILDGDRT 724


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 272/549 (49%), Gaps = 42/549 (7%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTK-----ELRASHSL---LLTGRLLHSL 73
           S L + +  TV L L N        L +F +  K     +LRA  +L   L   R    L
Sbjct: 51  SLLSSLNSQTVHLILSNHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKL 110

Query: 74  VVAKKYPKIRSFLHMF----VKNGKFTSVSTIFHALS-TCSDSLCRNSII----IDMLML 124
             ++K+ +IR   H+F    V +G    V+ I   +   C++S C  +       D+L  
Sbjct: 111 HKSQKFAEIR---HLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 167

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y  N       EAF+     G      SC   L AL + G+ +     ++ M    +E+
Sbjct: 168 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 227

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + S   VL+GLCK G +     +M+++ + GV   VVTYN  I+GY K+  +G + +  
Sbjct: 228 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-- 285

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   M + G+  N VT+  LI GF     I  A ++FEEM   GI A V  Y S+I+  
Sbjct: 286 -ILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G +  A+ L DEM   GL P+  T  ALI+G CK   +E A++L +++  +G+  + 
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           + +NTLID YC+ G +++A  ++  M  +G+  DV  YN + +GL +    +  + ++  
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 464

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V  G+    +++  L+   CK+G   +A  +  E   ME++   PNI+TYNVLI G+ +
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE---MEEKGNVPNIITYNVLIDGYSK 521

Query: 485 KGKLEDANGLLNELLEKGLIPN-QTTYQIVR---------------EEMMEKGFIPDIEG 528
           +G +++A+ L +EL  +GLIP+  T   ++                +EM ++G +P++  
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581

Query: 529 HMYNISGTS 537
           +   ISG S
Sbjct: 582 YTAMISGLS 590



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 20/413 (4%)

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           V    ++L+   D LC+   +               +G +        G+K++V++ N  
Sbjct: 225 VEVTVYSLTIVLDGLCKRGDV--------------EMGRKLMDEVAAKGVKANVVTYNAF 270

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +    K      V  +   M++  +  N+ ++  +++G    GK+ +A  + E+M+  G+
Sbjct: 271 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 330

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
              V  Y  +I   C+ G + +   A  +F +M + G++P+  T+  LI G CK   + A
Sbjct: 331 EADVYVYTSIISCNCRSGNVKR---ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 387

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  +  EM   GI    V +N+LI+G C  G +DEA+ L+  M   GL+ +V   N++ +
Sbjct: 388 AQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS 447

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK    ++A+ L   + E+G+SP+ +++ TLID YCKEG   +A  +   M ++G +P
Sbjct: 448 GLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP 507

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           ++ TYN LI G S+ GN++    + +EL N G+   + T   L+   C DGK   A+ L 
Sbjct: 508 NIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLF 567

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           DEM    +    PN+VTY  +I G  + G+ E+A  L +E+ E GL P+ T Y
Sbjct: 568 DEM---PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 617



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D GL  S  +   L+  + K G+ E  + +  EM+ + I+LN   FN +++G C+
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           +G +++A  +   M+  G+   V  YN +  G CK   + +  +A  +   MVE G+ PN
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCK---LNRKDEAKGLLFSMVERGVSPN 473

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            ++F TLID +CK+ N   A +VF EM   G    ++TYN LI+G    G + EA  L+D
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 533

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           E+   GL P+V T  +LI+G C    V+ A  LFD++ ++GL P+V+TY  +I    K+G
Sbjct: 534 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 593

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           R E+AF + + M + G+ PD + Y+ L+  L
Sbjct: 594 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 38/334 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++   L+      GK E+ + +++EM+ + IE ++  +  +++  C++G + +A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M   G+ P   TY  LI G CK G   +M  A  +  +M   GI  N V FNTL
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAG---QMEAAQMLVNEMQGKGIDLNPVIFNTL 410

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+   +  A+++   M   G+ + V  YNS+ +GLC   + DEA  L   M+  G+
Sbjct: 411 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 470

Query: 326 KPN-----------------------------------VVTSNALINGFCKKKLVEKARV 350
            PN                                   ++T N LI+G+ K+  +++A  
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D++  +GL P V T  +LI   C +G+++ A  + + M  RG++P+V TY  +I+GLS
Sbjct: 531 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 590

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++G  E    + +E+   G+      Y+ LVG+L
Sbjct: 591 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 260/540 (48%), Gaps = 29/540 (5%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPV--------------LILRYFCWSTK 55
           + + E++R   W   +       I+ LF+S   P+              L LR+F W+  
Sbjct: 72  DSVREIVREQRWDDFR-------IVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKG 124

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
            +   H+      L+H L  A+ Y    + L   +   +      +F  L    +     
Sbjct: 125 RIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPG 184

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
             + D L  A ++        E F +   + +     SCN LL  L K G+ +     +K
Sbjct: 185 FGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFK 244

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M    I+ ++ ++N +++ LCK G L  A  +   MK  G +P +VTYN LIDG+   G
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH---G 301

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +G + +   +F+ M +    P+ +T+N LI+ FCK E +  A +   EM ++G+   VV
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY++ I+  C +G L EA+    +M    L PN  T  +LI+  CK   + +A  L ++I
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            + G+  +V+TY  L+D  C+EGRM++A  +  +ML+ GV P+  TY  L+ G  +   +
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVT 474
           E  ++I+ E+    ++  L+ Y  ++  LC + + ++A  L+ E+    KE     N V 
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI----KESGINTNAVI 537

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           Y  L+  + + G+  +A  LL E+L+ GLI  + TY  + + + + G + +   H   +S
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 229/469 (48%), Gaps = 42/469 (8%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEA 138
           P I ++  +   +GK   +           D+ C   +I  + L+  + K  +    FE 
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
                  GLK +V++ +  + A  KEG  ++    + +M+R  +  N  ++  +++  CK
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AG L +A  ++E++   G+   VVTY  L+DG C++G   +M +A+ VF+ M+  G+ PN
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG---RMKEAEEVFRAMLNAGVAPN 464

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA----- 313
           + T+  L+ GF K + +  A  + +EM    I   ++ Y +++ GLC + +L+EA     
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524

Query: 314 ------------------------------VALRDEMMASGLKPNVVTSNALINGFCKKK 343
                                         + L +EM+  GL    VT  ALI+G CK  
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           LV++A   F  +SE GL P+V  Y  L+D  CK    E A  + + MLD+G++PD   Y 
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  + GN++   N+ + ++  GM   L  Y  L+  L   G+ +KA +LLDEM   
Sbjct: 645 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG- 703

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
             +   P+ V Y  LIK +   GK+++A  L NE+ ++G+I   + + +
Sbjct: 704 --KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 750


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 247/484 (51%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLM 123
           R+L  ++    YP  R   S +H + ++G ++    +   +  C    C+   ++ ++L+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG---CQPGYVVYNILI 411

Query: 124 LAYVKNMK-P-----HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
                N K P      L  +A+    D  +  + ++ + L R L   GKFE    + +EM
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             +    +  +++ V+  LC A K++ A  + E+MKS  V P V TY ILID +CK   +
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK---V 528

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G + +A   F +MV +G  PN VT+  LI  + K   +S+A ++FE M S G    VVTY
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASG----------------LKPNVVTSNALINGFCK 341
            +LI+G C  G++++A  +   M  +                   PN+ T  AL++G CK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++AR L D +S +G  P+ I Y+ LID +CK G++++A  +   M +RG  P+V T
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++    +++ ++ N     ++ Y  ++  LCK GK+ +A  L   M 
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL---MS 765

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ME++   PN+VTY  +I GF + GK++    L+ ++  KG  PN  TY+++       G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 522 FIPD 525
            + D
Sbjct: 826 LLDD 829



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 195/385 (50%), Gaps = 20/385 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V +   L+ +  K G  +     + EM R     N+ ++  +++   KA K++ A+++ E
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK--------ADAVFKDM---VENGIL--P 257
            M S G  P VVTY  LIDG+CK G I K  +        AD    DM   +++G +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+  L+DG CK   +  A  + + M   G     + Y++LI+G C  GKLDEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G  PNV T ++LI+   K K ++ A  +   + E   +P+VI Y  +ID  CK 
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+ ++A+ + + M ++G  P+V TY  +I G  + G V+    +M ++   G     VTY
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLN 496
            +L+   C  G    A  LLDEM    K+  WP ++  Y  +I+GF ++  +  + GLL+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM----KQTYWPKHMAGYRKVIEGFNREFII--SLGLLD 868

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
           E+ E   +P    Y+I+ +   + G
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAG 893



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 181/383 (47%), Gaps = 38/383 (9%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  +  C ++L  ++ EG +            RRI      FN +++  C++G  + A  
Sbjct: 347 KRQLGRCKRILSMMITEGCYPS----------RRI------FNSLIHAYCRSGDYSYAYK 390

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYC---KKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +++ M   G  P  V YNILI G C   K   +  +  A+  + +M++  ++ N+V  + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L    C       A  +  EM S G      TY+ +I  LC   K+D A  L +EM ++ 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+V T   LI+ FCK  L+++AR  FD++   G +P+V+TY  LI AY K  +M  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--------------- 429
            +   ML  G +P+V TY  LI G  + G +E    I   +  N                
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 430 -MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
                + TY  LV  LCK  K K+A  LLD    M  E   PN + Y+ LI GFC+ GKL
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLD---VMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 489 EDANGLLNELLEKGLIPNQTTYQ 511
           ++A  +  ++ E+G  PN  TY 
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYS 710



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 264/636 (41%), Gaps = 135/636 (21%)

Query: 3   CSANSTIEDITELIRN------HHWSKL----KNTDPNTVILQLFNSDADPVLILRYFCW 52
           CS ++ +  I+++IRN      H   K     +     T+++ + +   +P L +++F W
Sbjct: 94  CSNDAVL--ISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIW 151

Query: 53  STKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL 112
           + +++   H    TG + H+L+              F++  +      +   L+      
Sbjct: 152 AGRQIGYGH----TGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKC 207

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           CRN +               ++  E   R  D G K S L+ N L+R  ++  + +    
Sbjct: 208 CRNGLW--------------NVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYL 253

Query: 173 VYKEMKR------------------------------RRIELNLDS--FNFVLNGLCKAG 200
           V++EM                                 + E  LD+  +  +++GLC+A 
Sbjct: 254 VHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEAS 313

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
              +A D +  M+S    P VVTY IL+ G  +K  +G+  +   +   M+  G  P+  
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR---ILSMMITEGCYPSRR 370

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD------------- 307
            FN+LI  +C+  + S A K+ ++MG  G   G V YN LI G+C +             
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 308 ----------------------------GKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
                                       GK ++A ++  EMM+ G  P+  T + +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C    V+ A +LF+++    + P V TY  LID++CK G ++ A    + M+  G  P+V
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL--- 456
            TY  LI    +   +     +   +++ G    +VTY  L+   CK G+ +KA  +   
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 457 ---------LDEMFKMEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                    +D  FK++    + PNI TY  L+ G C+  K+++A  LL+ +  +G  PN
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 507 QTTY----------------QIVREEMMEKGFIPDI 526
              Y                Q+V  +M E+G+ P++
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 7/311 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+    K GK ++ + V+ +M  R    N+ +++ +++ L K  +L+ A  ++  M  
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              +P V+ Y  +IDG CK   +GK  +A  +   M E G  PN VT+  +IDGF K   
Sbjct: 735 NSCAPNVIIYTEMIDGLCK---VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +++  +MG+ G A   VTY  LIN  C  G LD+A  L DEM  +    ++     
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM--LD 392
           +I GF ++ ++     L D+I+E    P +  Y  LID++CK GR+E A  +   M    
Sbjct: 852 VIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCT 909

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
                D   Y+ LI  LS    V+    +  +++  G    L  +  LV  L +  + ++
Sbjct: 910 SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEE 969

Query: 453 AVSLLDEMFKM 463
           A+ L D + +M
Sbjct: 970 ALQLSDCICQM 980


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 223/399 (55%), Gaps = 6/399 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+      ++G   +V+    L+    K+G+ E  + ++ EM +  +  N  ++  +++G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K G   +  ++ E M+  GV P + TYN +++  CK G     +K   VF +M E G+
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFK---VFDEMRERGV 299

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N VT+NTLI G C++   + A KV ++M S+ I   ++TYN+LI+G C  GKL +A++
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALS 359

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L  ++ + GL P++VT N L++GFC+K     A  +  ++ E+G+ PS +TY  LID + 
Sbjct: 360 LCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +   ME A  +R+SM + G++PDV TY+ LI G   +G +     +   +V   +    V
Sbjct: 420 RSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEV 479

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN ++   CK+G S +A+ L  +   ME+++  PN+ +Y+ LI+  C++ KL++A  L+
Sbjct: 480 IYNTMILGYCKEGSSYRALRLFRD---MEEKELAPNVASYSYLIRVLCKERKLKEAEDLV 536

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
            ++++ G+ P+ T   ++     +      I+   +N++
Sbjct: 537 EKMIDSGIDPSDTICNLISRAKTDSPVAQIIDASSFNLN 575



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 191/332 (57%), Gaps = 3/332 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +L+    KN     GFE +++  ++G+  ++ + N ++  L K+G+ +D  
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V+ EM+ R +  N+ ++N ++ GLC+  K N+A+ +M+ MKS  ++P ++TYN LIDG+
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C    +GK+ KA ++ +D+   G+ P+ VT+N L+ GFC+  + S A K+ +EM   GI 
Sbjct: 349 C---SVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+       ++ A+ LR  M   GL P+V T + LI+GFC K  + +A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E+ L P+ + YNT+I  YCKEG    A  +   M ++ + P+V++Y+ LI  L +
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCK 525

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           E  ++   +++ +++++G+       N++  A
Sbjct: 526 ERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 203/425 (47%), Gaps = 52/425 (12%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ A V+    +   Y + EM  +      + FN +L  +  +   N+      + K + 
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK-IK 158

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V   V ++ I+I G C+ G I K +    +  ++ E G  PN V + TLIDG CK   I 
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFD---LLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F EMG  G+ A   TY  LI+GL  +G   +   + ++M   G+ PN+ T N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N  CK    + A  +FD++ E+G+S +++TYNTLI   C+E +  +A  + + M    + 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TYN LI G    G +    ++  +L + G+   LVTYN+LV   C+ G +  A  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 457 LDEMFK--------------------------------MEKEKKWPNIVTYNVLIKGFCQ 484
           + EM +                                ME+    P++ TY+VLI GFC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 485 KGKLEDANGLLNELLEKGLIPNQ--------------TTYQIVR--EEMMEKGFIPDIEG 528
           KG++ +A+ L   ++EK L PN+              ++Y+ +R   +M EK   P++  
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 529 HMYNI 533
           + Y I
Sbjct: 516 YSYLI 520



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 90/357 (25%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL--------------------- 300
           +  +I+ + + +++ +++  F EM   G   G   +N+L                     
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 301 -------------INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                        I G C  G+++++  L  E+   G  PNVV    LI+G CKK  +EK
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 348 ARVLF-----------------------------------DDISEQGLSPSVITYNTLID 372
           A+ LF                                   + + E G+ P++ TYN +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK+GR +DAF + + M +RGV  ++ TYN LI GL RE        +M+++ +  +  
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L+TYN L+   C  GK  KA+SL  +   ++     P++VTYNVL+ GFC+KG    A 
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRD---LKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393

Query: 493 GLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
            ++ E+ E+G+ P++ TY I                +R  M E G +PD+  H Y++
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDV--HTYSV 448



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 378 GRMEDAFAMRNSMLDRGVLPDVST-----YNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           G+++  F   +S+L      + S      Y  +I    +  +++      NE+V+ G   
Sbjct: 68  GKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           G   +N L+  +       +     +E     K K   ++ ++ ++IKG C+ G++E + 
Sbjct: 128 GSNCFNNLLTFVVGSSSFNQWWCFFNE----SKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            LL EL E G  PN   Y  + +   +KG I
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 211/406 (51%), Gaps = 41/406 (10%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N ++    KEG       ++KEM +R I  +L +++ V++ LCKA  ++KA   + 
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + GV P   TYN LI GY      G+  +A  VFK+M    ILP+ V  NTL+   C
Sbjct: 281 QMVNKGVLPDNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A  VF+ M   G    V +Y  ++NG    G L +   L D M+  G+ P++ 
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR------------------- 431
           +D+GV+PD   Y+CLI G    G++   + +++E++NNGMR                   
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 432 ------------AGL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                        GL    V YN+L+   C  GK +KA+ + D M     E   PN+V Y
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE---PNVVGY 574

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             L+ G+C+ G++++   L  E+L+KG+ P+   Y I+ + + E G
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 236/482 (48%), Gaps = 23/482 (4%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG----KFTSVSTIFHALSTCS--------D 110
           L+    ++H+L  A+   K  +FL   V  G     +T  + I+   ST           
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315

Query: 111 SLCRNSIIIDM-----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
            + R SI+ D+     LM +  K  K     + F      G    V S   +L     +G
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
              D+  ++  M    I  ++ +FN ++      G L+KA  I  +M+  GV P VVTY 
Sbjct: 376 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +I   C+   IGKM  A   F  M++ G++P++  ++ LI GFC   ++  A ++  E+
Sbjct: 436 TVIAALCR---IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            ++G+   +V + S+IN LC  G++ +A  + D  +  GL P+ V  N L++G+C    +
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML +G+ P    YN +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G     +   +E+  +G+     TY+I++  L K+    +A+ L  E+  M  
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +    +I+T N +I G  Q  ++E+A  L   +   GL+P   TY I+   ++++G + +
Sbjct: 673 KI---DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEE 729

Query: 526 IE 527
            E
Sbjct: 730 AE 731



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 208/388 (53%), Gaps = 14/388 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALV-----KEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS      A++     +  + E     + ++ R  + ++ 
Sbjct: 89  PALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              + +L G C+A + ++A DI+      LG  P V +YNIL+   C +G  G+   AD 
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ---ADD 205

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  P+ V +NT+IDGF K+ +++ A  +F+EM   GI   +VTY+S+++ 
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +D+A A   +M+  G+ P+  T N LI G+      ++A  +F ++  Q + P 
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+  NTL+ + CK G++++A  + ++M  +G  PDV +Y  ++ G + +G +  + ++ +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+   + T+N+L+ A    G   KA+ + +E   M      P++VTY  +I   C
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE---MRDHGVKPHVVTYMTVIAALC 442

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + GK++DA    N+++++G++P++  Y 
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYH 470



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  +++ ++ G C 
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V +  +I+  CK   +G++  A  +F   V  G+ P+
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 535

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V +N L+DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  N +I+G  +      A+V F +++E G++ +  TY+ ++    K  
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  D+ T N +IAG+ +   VE  +++   +  +G+    VTY+
Sbjct: 656 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     P+    N +++   +K ++  A   L++
Sbjct: 716 IMITNLLKEGLVEEA----EDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 771

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 772 IDERNFSLEHLTAMLLVDLFSSKG 795



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 3/321 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  ++    ++  L K G+  D + ++       +  +   +N +++G C  GK+ KA
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M S G+ P VV Y  L++GYCK   IG++ +  ++F++M++ GI P+ + +N +
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCK---IGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  +      A   F EM   GIA    TY+ ++ GL  +   DEA+ L  E+ A  +
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           K +++T N +I G  + + VE+A+ LF  IS  GL P  +TY+ +I    KEG +E+A  
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAED 732

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M +SM + G  PD    N ++  L ++  +      ++++         +T  +LV    
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 792

Query: 446 KDGKSKKAVSLLDEMFKMEKE 466
             G  ++ +  L   +    E
Sbjct: 793 SKGTCREQIRFLPAKYHFLAE 813



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 24/186 (12%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGV 418
           LSP+  TY  L+D   +  R E A A    +L  G+  D    + L+ G        E +
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTY 475
             +++     G    + +YNIL+ +LC  GKS +A    D++ +M  E      P++V Y
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA----DDLLRMMAEGGTVCSPDVVAY 224

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMME 519
           N +I GF ++G +  A  L  E++++G+ P+  TY  V                  +M+ 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 520 KGFIPD 525
           KG +PD
Sbjct: 285 KGVLPD 290


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 217/424 (51%), Gaps = 8/424 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + +N    + + IF  LS  +    RN +    L+  + +  +     + F +  +    
Sbjct: 249 YCRNKNVDAANAIF--LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V +   ++ AL + G+  +   ++KEM  +  + N+ ++  ++  LC+    + A  I
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +  M   G+ P VVTYN LIDGYCKKG       A  +   M  N   PN  T+N LI G
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSAS---ALEILSLMESNNCSPNARTYNELILG 423

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           FC+ +NI  AM +  +M    +   VVTYN LI+G C +G L  A  L   M  SGL P+
Sbjct: 424 FCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T +  I+  CK+ LVE+AR LF+ + E+G+  + + Y+TLID YCK G++ D   + +
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML  G +P+  TYN LI G  +E N +  R +++ ++   +     TY IL+  L KD 
Sbjct: 544 KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDD 603

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +  +A  + D+M         P++  Y   I  +C  G+L+DA  L+ ++  KG++P+  
Sbjct: 604 EFDQAHDMFDQMLSTGSH---PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTM 660

Query: 509 TYQI 512
            Y +
Sbjct: 661 LYTL 664



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 239/511 (46%), Gaps = 41/511 (8%)

Query: 21  WSK---LKNTDPNTV---ILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLV 74
           W K   LKN  P+     I  LF  + DP   L +F W  ++    H++        S V
Sbjct: 62  WQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNV-------QSHV 114

Query: 75  VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHL 134
                    S L++ V NG       +   +   +DS      +++ML     ++M    
Sbjct: 115 ---------SMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEML-----RSMN--- 157

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
                +R   +  K ++   N LL  L +    ++++ VY EM    +  N+ + N ++N
Sbjct: 158 -----RRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVN 212

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK G + +A   +  +   G+S    TY  LI GYC+   +     A+A+F  M   G
Sbjct: 213 GYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDA---ANAIFLSMPNKG 269

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            L NEV++  LI GFC+   +  A+K+F +M        V TY  +I  LC  G+  EA+
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM     +PNV T   LI   C+    + A+ + + + E+GL PSV+TYN LID Y
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+G    A  + + M      P+  TYN LI G  R  N+    +++++++   ++  +
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYNIL+   CK+G    A  LL     M +    P+  TY+V I   C++G +E+A  L
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLS---LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              L EKG+  N+  Y  + +   + G + D
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSD 537



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 190/374 (50%), Gaps = 6/374 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL     +   L+    +    +    ++  M  +    N  S+  +++G C+A ++++A
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M      P V TY ++I   C+   +G+  +A  +FK+M E    PN  T+  L
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQ---LGRKTEALNMFKEMTEKHCQPNVHTYTVL 350

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C+D N   A K+   M   G+   VVTYN+LI+G C  G    A+ +   M ++  
Sbjct: 351 ICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNC 410

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N LI GFC+ K + KA  L   + E+ L P+V+TYN LI   CKEG +  A+ 
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M + G++PD  TY+  I  L + G VE  R++   L   G++A  V Y+ L+   C
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYC 530

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK      LLD   KM      PN +TYN LI G+C++   ++A  L++ ++++ + P
Sbjct: 531 KVGKVSDGRFLLD---KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEP 587

Query: 506 NQTTYQIVREEMME 519
              TY I+ + +++
Sbjct: 588 AADTYTILIDNLLK 601



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 194/427 (45%), Gaps = 66/427 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  SV++ N L+    K+G       +   M+      N  ++N ++ G C+   ++KA
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M    + P VVTYNILI G CK+G +G  YK   +   M E+G++P+E T++  
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK---LLSLMNESGLVPDEWTYSVF 490

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK   +  A  +FE +   GI A  V Y++LI+G C  GK+ +   L D+M+++G 
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550

Query: 326 KPNVVTSNALINGFCKKKLVEKARVL---------------------------------- 351
            PN +T N+LI+G+CK+K  ++AR+L                                  
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610

Query: 352 -FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            FD +   G  P V  Y   I AYC  GR++DA  +   M  +G++PD   Y   I    
Sbjct: 611 MFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYG 670

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL-------------- 456
           R G+++G   I+  +   G      TY+ L+  L  + K K+  S               
Sbjct: 671 RFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL-SNAKPKEVSSSSELSDLSSGVASND 729

Query: 457 -------------LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
                        LD   KM +    PN  TY   I G C+ G LE A+ L + + EKG 
Sbjct: 730 FSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ 789

Query: 504 IPNQTTY 510
            PN+  Y
Sbjct: 790 SPNEDIY 796



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 200/406 (49%), Gaps = 6/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L Y +N         F    + G   + +S   L+    +  + ++   ++ +M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               + ++  ++  LC+ G+  +A ++ ++M      P V TY +LI   C+        
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDD-- 362

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +   M+E G++P+ VT+N LIDG+CK    ++A+++   M S+  +    TYN LI
Sbjct: 363 -AKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C    + +A++L  +M+   L+PNVVT N LI+G CK+  +  A  L   ++E GL 
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY+  ID  CK G +E+A ++  S+ ++G+  +   Y+ LI G  + G V   R +
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++++++ G     +TYN L+   CK+   K+A  L+D M K + E   P   TY +LI  
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE---PAADTYTILIDN 598

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             +  + + A+ + +++L  G  P+   Y          G + D E
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 37/443 (8%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S++   N+   + L+L + +    H       +  +  L+ +V++ N L+    KEG   
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M    +  +  +++  ++ LCK G + +A  + E +K  G+    V Y+ LI
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK   +GK+     +   M+  G +PN +T+N+LIDG+CK++N   A  + + M   
Sbjct: 527 DGYCK---VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
            I     TY  LI+ L  D + D+A  + D+M+++G  P+V    A I+ +C    ++ A
Sbjct: 584 DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            VL   ++ +G+ P  + Y   IDAY + G ++ AF +   M + G  P   TY+CLI  
Sbjct: 644 EVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKH 703

Query: 409 LS-----------------------------REGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           LS                             R  + E   ++  ++  +G      TY  
Sbjct: 704 LSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGK 763

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            +  LCK G  + A  L D M    KEK + PN   YN L+   CQ G   +A   L+ +
Sbjct: 764 FITGLCKVGCLEVAHRLFDHM----KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819

Query: 499 LEKGLIPNQTTYQIVREEMMEKG 521
           +E   +P+  + +++   + ++G
Sbjct: 820 IENRHLPHLDSCKLLLCGLYDEG 842



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 175/428 (40%), Gaps = 39/428 (9%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           F+    K G      ++F +L      +  N +I   L+  Y K  K   G     +   
Sbjct: 490 FIDTLCKRGLVEEARSLFESLK--EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G   + ++ N L+    KE  F++   +   M +R IE   D++  +++ L K  + ++
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A D+ + M S G  P V  Y   I  YC  G   ++  A+ +   M   GI+P+ + +  
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHG---RLKDAEVLICKMNAKGIMPDTMLYTL 664

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE------------ 312
            ID + +  +I  A  + + M   G      TY+ LI  L  + K  E            
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL-SNAKPKEVSSSSELSDLSS 723

Query: 313 AVALRD------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            VA  D                  +M   G  PN  T    I G CK   +E A  LFD 
Sbjct: 724 GVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDH 783

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G SP+   YN+L+   C+ G   +A    + M++   LP + +   L+ GL  EGN
Sbjct: 784 MKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGN 843

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            E  + +    +        + + +L+  L K G S K   L      ME +    +  T
Sbjct: 844 DEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFG---IMETQGCQIHPKT 900

Query: 475 YNVLIKGF 482
           Y++LI+GF
Sbjct: 901 YSMLIEGF 908



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 183/433 (42%), Gaps = 68/433 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL     + +  +  L K G  E+   +++ +K + I+ N   ++ +++G CK GK++  
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNT 264
             +++ M S G  P  +TYN LIDGYCK+    K +K   +  D M++  I P   T+  
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKE----KNFKEARLLVDIMIKRDIEPAADTYTI 594

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID   KD+    A  +F++M S G    V  Y + I+  C  G+L +A  L  +M A G
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI----DAYCKE--- 377
           + P+ +     I+ + +   ++ A  +   + E G  PS  TY+ LI    +A  KE   
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSS 714

Query: 378 --------------------GRMEDAFAMR--NSMLDRGVLPDVSTYNCLIAGLSREGNV 415
                                R++  F +     M + G  P+ +TY   I GL + G +
Sbjct: 715 SSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCL 774

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------- 462
           E    + + +   G       YN L+G  C+ G   +A+  LD M +             
Sbjct: 775 EVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLL 834

Query: 463 --------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                               ++ E  +  +V + VLI G  +KG  +  + L   +  +G
Sbjct: 835 LCGLYDEGNDEKAKRVFCSFLQCEYNYDEMV-WKVLIDGLLKKGLSDKCSDLFGIMETQG 893

Query: 503 LIPNQTTYQIVRE 515
              +  TY ++ E
Sbjct: 894 CQIHPKTYSMLIE 906


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 261/533 (48%), Gaps = 64/533 (12%)

Query: 43  PVLILRYFCW---STKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVS 99
           P  ++ +F W   S  E   S S L    ++ SL+   K+   +S L  +++        
Sbjct: 55  PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSD----- 109

Query: 100 TIFHALSTCSDSLCRN--------SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
               +LS C+  L  N          + D+ + AY+   KPH+  + F++     LK ++
Sbjct: 110 ---ASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL 166

Query: 152 LSCNQLLRALVK---EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           L+CN LL  LV+            V+ +M +  + LN+ +FN ++NG C  GKL  A  +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226

Query: 209 MEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +E M S   V+P  VTYN ++    KKG +  + +   +  DM +NG++PN VT+N L+ 
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE---LLLDMKKNGLVPNRVTYNNLVY 283

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+CK  ++  A ++ E M    +   + TYN LINGLC  G + E + L D M +  L+P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VVT N LI+G  +  L  +AR L + +   G+  + +T+N  +   CKE + E      
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403

Query: 388 NSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             ++D  G  PD+ TY+ LI    + G++ G   +M E+   G++   +T N ++ ALCK
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463

Query: 447 DGKSKKAVSLL----------DEM---------FKMEKEKK----W---------PNIVT 474
           + K  +A +LL          DE+         F+ EK +K    W         P + T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           +N LI G C  GK E A    +EL E GL+P+ +T+  +     +E  +EK F
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 228/424 (53%), Gaps = 39/424 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+    K G  ++   + + MK+  +  +L ++N ++NGLC AG + + 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG--------------------------- 238
            ++M+ MKSL + P VVTYN LIDG C + G+                            
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388

Query: 239 ---KMYKADAVFKDMVE----NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
              K  K +AV + + E    +G  P+ VT++TLI  + K  ++S A+++  EMG  GI 
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +T N++++ LC + KLDEA  L +     G   + VT   LI GF +++ VEKA  +
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +D++ +  ++P+V T+N+LI   C  G+ E A    + + + G+LPD ST+N +I G  +
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           EG VE      NE + +  +    T NIL+  LCK+G ++KA++  + +     E++  +
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI----EEREVD 624

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
            VTYN +I  FC+  KL++A  LL+E+ EKGL P++ TY      +ME G + + +  + 
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684

Query: 532 NISG 535
             SG
Sbjct: 685 KFSG 688



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 60/318 (18%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ AY+K        E  +  G  G+K + ++ N +L AL KE K ++   +     +R 
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
             ++  ++  ++ G  +  K+ KA ++ ++MK + ++P V T+N LI G C  G   K  
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG---KTE 538

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI----------- 290
            A   F ++ E+G+LP++ TFN++I G+CK+  +  A + + E   H             
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 291 -----------------------AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
                                      VTYN++I+  C D KL EA  L  EM   GL+P
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658

Query: 328 NVVTSNALIN----------------------GFCKKKL-VEKARVLFDDISEQGLSPSV 364
           +  T N+ I+                      G  K+ L VE  +      S++ L+   
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEA 718

Query: 365 ITYNTLIDAYCKEGRMED 382
           I Y+ +ID  C  GR+++
Sbjct: 719 IAYSDVIDELCSRGRLKE 736



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 42/170 (24%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGV 418
           PS   ++  + AY  EG+   A  +   M+   + P++ T N L+ GL R     ++   
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           R + +++V  G                        VSL              N+ T+NVL
Sbjct: 189 REVFDDMVKIG------------------------VSL--------------NVQTFNVL 210

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKGFIPDIE 527
           + G+C +GKLEDA G+L  ++ +  + P+  TY  + + M +KG + D++
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 167/552 (30%), Positives = 266/552 (48%), Gaps = 76/552 (13%)

Query: 18  NHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTGRLLHSLVV 75
             H + L +      +L       D    LR   W++K+   R + S+            
Sbjct: 42  QQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSI------------ 89

Query: 76  AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
              Y +I   L    K G F S+  I   +      + R  ++I   + +Y K       
Sbjct: 90  ---YEEI---LRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLI--FIDSYAK------- 134

Query: 136 FEAFKR--------AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           FE ++           ++GL    L  N LL  LV   K + VE V+  M  + I+ ++ 
Sbjct: 135 FELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVS 194

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +FN ++  LCKA ++  A  +ME+M S G+ P   T+  L+ G+ ++G +   ++   V 
Sbjct: 195 TFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFR---VK 251

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM---GSHGIAAGV---------- 294
           + M++ G     VT N L+ GFCK+  I  A+   +EM   G H +A  +          
Sbjct: 252 EQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQ 311

Query: 295 ---VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TYN LI+ LC  GKL EA+ L  EM  SG   NV+T N LI+GFCK K +E+A  +
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD +  QGLS + +TYNTLID  CK  R+++A  + + M+  G+ PD  TYN ++    R
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           EG+++   +I+  + +NG    +VTY  L+G LCK G+ + A  LL  + +++     P+
Sbjct: 432 EGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI-QLKGMVLTPH 490

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE---------------- 515
              YN +I+   ++ + ++A  L  E+ EKG  P+  TY+IV                  
Sbjct: 491 --AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFV 548

Query: 516 -EMMEKGFIPDI 526
            EM+EKGF+P+ 
Sbjct: 549 IEMIEKGFLPEF 560



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 172/338 (50%), Gaps = 9/338 (2%)

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           EGK      +Y EMK +  + +  ++N +++ LC  GKL +A  ++ +M+  G +  V+T
Sbjct: 292 EGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVIT 351

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LIDG+CK     K+ +A+ +F  M   G+  N VT+NTLIDG CK   +  A ++ +
Sbjct: 352 YNTLIDGFCKNK---KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           +M   G+     TYNS++   C +G + +A  +   M ++G +P++VT   LI G CK  
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            VE A  L   I  +G+  +   YN +I A  K  R ++A  +   M ++G  PD  TY 
Sbjct: 469 RVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYK 528

Query: 404 CLIAGLSREGNVEG-VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
            +  GLS  G   G   + + E++  G      ++ +L   LC        + L+D    
Sbjct: 529 IVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVD--LV 586

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           MEK     N V   V+I+GF +  K +DA   L  LL+
Sbjct: 587 MEKANFSQNEV---VMIRGFLKIRKFQDALATLGGLLD 621



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 8/281 (2%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN I  + L+  + KN K     E F +    GL  + ++ N L+  L K  + ++   +
Sbjct: 347 RNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQL 406

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ +  ++N +L   C+ G + KA+DI++ M S G  P +VTY  LI G CK
Sbjct: 407 MDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCK 466

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G   ++  A  + + +   G++     +N +I    K +    AM++F EM   G    
Sbjct: 467 AG---RVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPD 523

Query: 294 VVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             TY  +  GL    G + EAV    EM+  G  P   +   L  G C   + +    L 
Sbjct: 524 AFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLV 583

Query: 353 DDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           D + E+   S + +    +I  + K  + +DA A    +LD
Sbjct: 584 DLVMEKANFSQNEV---VMIRGFLKIRKFQDALATLGGLLD 621



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 170/448 (37%), Gaps = 126/448 (28%)

Query: 76  AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
           + ++P   SF H  + N   +  ST  H  +  S                   N  P   
Sbjct: 18  SHQHPPF-SFFHKPISNSTLSFASTQQHTATLSS-------------------NFTPAQL 57

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            +  +R  D   +++ L   +LL    K+  F     +Y+E+ R+               
Sbjct: 58  LDTLRRQND---ETAAL---RLLSWASKQPNFRPNSSIYEEILRK--------------- 96

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K G  N   DI+++MK L          I ID Y K                      
Sbjct: 97  LGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAK---------------------- 134

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
                 F    +  C    I   M+V       G+A   + YN L+N L VDG       
Sbjct: 135 ------FELYEEILC----IVEVMEV-----EFGLALDTLLYNFLLNVL-VDGN------ 172

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                                    K KLVE        +  +G+ P V T+N LI A C
Sbjct: 173 -------------------------KLKLVENVH---STMVSKGIKPDVSTFNILIKALC 204

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K  ++  A  +   M   G++PD  T+  L+ G   EGN++G   +  ++++ G     V
Sbjct: 205 KAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNV 264

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMF-------------KMEKEKKWPNIVTYNVLIKGF 482
           T N+LV   CK+G+ ++A+S +DEM              +M+ +   P+  TYN+LI   
Sbjct: 265 TVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSL 324

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY 510
           C +GKL++A GLL E+   G   N  TY
Sbjct: 325 CYRGKLQEALGLLREMEISGCARNVITY 352


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 216/427 (50%), Gaps = 44/427 (10%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFED---VEYVYKEMKRRRIELNLDSFNFVLNGL 196
           KR  + G    V+S N LL+    E + E+   + ++  + + R    N+ S+  V+NG 
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGF 213

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
              G+++KA ++  +M   G+ P VVTY  +IDG CK   + +   A+ VF+ M++ G+ 
Sbjct: 214 FTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR---AEGVFQQMIDKGVK 270

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+  T+N LI G+         +++ EEM +HG+     TY SL+N LC +G+  EA  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 317 RDEMMASGLKPNVVTSNALINGFC-----------------------------------K 341
            D M+  G+KPNV     LI+G+                                    K
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           K ++++A  +F+ + +QGLSP V+ Y  LIDA CK GR++DA    N M++ GV P++  
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N L+ GL      E  +    E++N G+R  +V +N ++  LC  G+  KA  L+D   
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID--- 507

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ME+    P +++Y  LI G C  G++++A   L+ +L  GL P++ TY  +       G
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567

Query: 522 FIPDIEG 528
            I D  G
Sbjct: 568 RIDDAYG 574



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 210/428 (49%), Gaps = 10/428 (2%)

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           VS     +  C+  +  +     +L+  + +  +   GF  F      G + + +  NQL
Sbjct: 76  VSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQL 135

Query: 158 LRALVKEGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI---MEDMK 213
           L+ L    +  E ++ + K M       ++ S+N +L G C   +  +A ++   M D +
Sbjct: 136 LKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                P VV+Y I+I+G+  +G + K Y    +F +M++ GI PN VT+ T+IDG CK +
Sbjct: 196 GRSCPPNVVSYAIVINGFFTEGQVDKAYN---LFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A  VF++M   G+     TYN LI+G    GK  E V + +EM A GLKP+  T  
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +L+N  C      +AR LFD +  +G+ P+V  Y  LI  Y  +G + +   + N M++ 
Sbjct: 313 SLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ PD   +N +    +++  ++   +I N++   G+   +V Y  L+ ALCK G+   A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           V   ++M     E   PNI  +N L+ G C   K E A     E+L +G+ P+   +  +
Sbjct: 433 VLKFNQMM---NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 514 REEMMEKG 521
              +  KG
Sbjct: 490 LCNLCTKG 497



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 35/415 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GLK    +   LL  L   G+  +  +++  M R+ I+ N+  +  +++G    G L++
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             D++  M   G+SP    +NI+   Y KK  I +   A  +F  M + G+ P+ V +  
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE---AMHIFNKMKQQGLSPDVVNYGA 418

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID  CK   +  A+  F +M + G+A  +  +NSL+ GLC   K ++A     EM+  G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+VV  N ++   C K  V KA+ L D +   G  P VI+Y TLI  +C  GR+++A 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + ML  G+ PD  TYN L+ G  R G ++    +  E++ NG+  G+VTY+ ++  L
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 445 CKDGKSKKAVSL----------------------------LDEMFKMEKE---KKWP-NI 472
               +  +A  L                            +DE FK+ +    K +   I
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEI 658

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            T+N++I    + G+ EDA  L   +   GL+P+  TY ++ E ++E+G++ + +
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFD 713



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 35/379 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +  A  K+   ++  +++ +MK++ +  ++ ++  +++ LCK G+++ A      M +
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P +  +N L+ G C    + K  KA   + +M+  GI P+ V FNT++   C    
Sbjct: 442 EGVAPNIFVFNSLVYGLCT---VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ + M   G   GV++Y +LI G C+ G++DEA    D M++ GLKP+  T N 
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G+C+   ++ A  +F ++   G++P V+TY+T++       R  +A  +  +M+  G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              ++  YN ++ GLS+   V+    +   L +   +  + T+NI++GAL K G+++ A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 455 SLL-------------------------------DEMFK-MEKEKKWPNIVTYNVLIKGF 482
            L                                D++F  MEK    PN    N L++  
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 483 CQKGKLEDANGLLNELLEK 501
             +G +  A   L +L EK
Sbjct: 739 LHRGDITRAGAYLCKLDEK 757



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 5/320 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + G+  ++   N L+  L    K+E  +  Y EM  + I  ++  FN +L  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ KA  +++ M+ +G  P V++Y  LI G+C  G I +  K+  V   M+  G+ P+
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV---MLSVGLKPD 552

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T+NTL+ G+C+   I  A  VF EM  +GI  GVVTY+++++GL    +  EA  L  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG + N+   N ++NG  K   V++A  LF  +  +     + T+N +I A  K G
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIA-GLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           R EDA  +  ++   G++PDV TY CLIA  L  EG +E   ++ + +  +G        
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTY-CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731

Query: 438 NILVGALCKDGKSKKAVSLL 457
           N LV  L   G   +A + L
Sbjct: 732 NALVRRLLHRGDITRAGAYL 751



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 3/323 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  V+  N +L  L  +G+    + +   M+R      + S+  ++ G C  G++++A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +  ++ M S+G+ P   TYN L+ GYC+ G I   Y    VF++M+ NGI P  VT++T+
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY---GVFREMLRNGITPGVVTYSTI 594

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G       S A +++  M + G    +  YN ++NGL  +  +DEA  L   + +   
Sbjct: 595 LHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF 654

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +  + T N +I    K    E A  LF  IS  GL P V TY  + +   +EG +E+   
Sbjct: 655 QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDD 714

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + ++M   G  P+    N L+  L   G++      + +L          T  +L+  L 
Sbjct: 715 LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLS 774

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK 468
           +D     A SL ++   + + KK
Sbjct: 775 RDEYHHHATSLPEKYRVLNEAKK 797



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 42/265 (15%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+K+F+ + +H   A V+ +N L+  +                  SG + +   S  +++
Sbjct: 33  ALKLFDGLLTHARPASVIAFNHLLTAVS---------------RVSGRRSSTTESELVVS 77

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            F   +++ +  +         ++P   TY+ LI  +C+ GR+E  FA    +L  G   
Sbjct: 78  LF--NRMIRECTI--------KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV 127

Query: 398 DVSTYNCLIAGLSREGNV-EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           +    N L+ GL     + E +  ++  +   G    +V+YN L+   C + ++++A+ L
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
           L  M   +     PN+V+Y ++I GF  +G+++ A  L  E++++G+ PN  TY      
Sbjct: 188 LHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDG 247

Query: 513 ------------VREEMMEKGFIPD 525
                       V ++M++KG  PD
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPD 272


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 258/533 (48%), Gaps = 64/533 (12%)

Query: 43  PVLILRYFCW---STKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVS 99
           P  ++ +F W   S  E   S S L    ++ SL+   K+   +S L  +++        
Sbjct: 55  PETLVSFFQWAQSSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSD----- 109

Query: 100 TIFHALSTCSDSLCRN--------SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
               +LS C+  L  N          + D+ + AY+   KPH+  + F++     LK ++
Sbjct: 110 ---ASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNL 166

Query: 152 LSCNQLLRALVK---EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           L+CN LL  LV+            V+ +M +  + L++ +FN ++NG C  GKL  A  +
Sbjct: 167 LTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGM 226

Query: 209 MEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +E M S   V+P  VTYN ++    KK   G++     +  DM  NG++PN VT+N L+ 
Sbjct: 227 LERMVSEFNVNPDNVTYNTILKAMSKK---GRLSDVKDLLLDMKRNGLVPNRVTYNNLVY 283

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+CK  ++  A ++ E M    I   + TYN LING+C  G + E + L D M +  L+P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQP 343

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VVT N LI+G  +  L  +A+ L + +   G+ P+ +T+N  +   CKE + E+     
Sbjct: 344 DVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKV 403

Query: 388 NSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             +++  G  PD+ TY+ LI    + G++ G   +M E+   G++   +T N ++ ALCK
Sbjct: 404 KELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463

Query: 447 DGKSKKAVSLLDEM-------------------FKMEKEKK----W---------PNIVT 474
           + K  +A +LLD                     F+ EK +K    W         P + T
Sbjct: 464 ERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTT 523

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           +N LI G C  GK E A    +EL E GL+P+  T+  +     +E  +EK F
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAF 576



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 224/426 (52%), Gaps = 43/426 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+    K G  ++   + + MK+  I  +L ++N ++NG+C AG + + 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREG 329

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++M+ MKSL + P VVTYN LIDG C + G+    +A  + + M  +G+ PN+VT N  
Sbjct: 330 LELMDVMKSLKLQPDVVTYNTLIDG-CFELGLS--LEAKKLMEQMENDGVKPNQVTHNIS 386

Query: 266 IDGFCKDE------------------------------------NISAAMKVFEEMGSHG 289
           +   CK+E                                    ++S A+++  EMG  G
Sbjct: 387 LKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I    +T N++++ LC + K+DEA  L D     G   + VT   LI G+ +++ VEKA 
Sbjct: 447 IKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAF 506

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            ++D++    ++P+V T+N+LI   C  G+ E A    + + + G+LPD  T+N +I G 
Sbjct: 507 EMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGY 566

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +EG VE      NE + +  +    T NIL+  LCK+G ++KA++  + +   E+E   
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TEREV-- 623

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
            + VTYN +I  FC+  KL++A  LL+E+ EK L P++ TY  +   +ME G + + +  
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADEL 682

Query: 530 MYNISG 535
           +   SG
Sbjct: 683 LKKFSG 688



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 136/318 (42%), Gaps = 60/318 (18%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ AY+K        E  +  G  G+K + ++ N +L AL KE K ++   +     +R 
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
             ++  ++  ++ G  +  K+ KA ++ ++MK + ++P V T+N LI G C  G   K  
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG---KTE 538

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI----------- 290
            A   F ++ E+G+LP++ TFN++I G+CK+  +  A + + E   H             
Sbjct: 539 LAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 291 -----------------------AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
                                      VTYN++I+  C D KL EA  L  EM    L+P
Sbjct: 599 NGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEP 658

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDIS-----------------------EQGLSPSV 364
           +  T N++I    +   + +A  L    S                       ++ L    
Sbjct: 659 DRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEA 718

Query: 365 ITYNTLIDAYCKEGRMED 382
           I Y+ +I+  C  GR+++
Sbjct: 719 IAYSDVINELCSRGRLKE 736



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 42/170 (24%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGV 418
           PS   ++  + AY   G+   A  +   M+   + P++ T N L+ GL R     ++   
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           R + +++V  G                        VSL              ++ T+NVL
Sbjct: 189 REVFDDMVKIG------------------------VSL--------------DVKTFNVL 210

Query: 479 IKGFCQKGKLEDANGLLNELL-EKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           + G+C +GKLEDA G+L  ++ E  + P+  TY  + + M +KG + D++
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVK 260


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 206/382 (53%), Gaps = 6/382 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++ N L+  L + G FE V  V  +M       ++  +  VL+G+CK G L  A
Sbjct: 255 GCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVA 314

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I++ M S G+ P VV YN ++ G C      +  +A+ +  +M +N    ++VTFN L
Sbjct: 315 HEILDRMPSYGLKPNVVCYNTVLKGLCSAE---RWEQAEELLAEMFDNDCPLDDVTFNIL 371

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D FC++  +   +++ E+M  HG    V+TY ++ING C +G +DEAV L   M A G 
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN ++   ++ G C  +    A  L   + EQG SP+ +T+NT+I+  CK+G +E A  
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML  G  PD+ +Y+ +I GL + G  +    ++N +VN GM    + Y+ +  AL 
Sbjct: 492 LLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G+  + + + D +  +       + V YN +I   C++G  + A   L  ++  G +P
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRS---DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608

Query: 506 NQTTYQIVREEMMEKGFIPDIE 527
           N++TY I+   +  +GF+ + +
Sbjct: 609 NESTYTILIRGLASEGFVKEAQ 630



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 187/357 (52%), Gaps = 8/357 (2%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLC-KAGKLNKASDIMEDMK-SLGVSPKVVTY 224
           F     V +++  R   L++ + N VLN +C + G +++A  ++ D+  S G  P VV+Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N ++ G C     G++     + ++MV  G  PN VTFNTLI   C++       +V  +
Sbjct: 229 NAVLKGLCMAKRWGRVQD---LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  HG    +  Y ++++G+C +G L+ A  + D M + GLKPNVV  N ++ G C  + 
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            E+A  L  ++ +       +T+N L+D +C+ G +     +   ML+ G +PDV TY  
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I G  +EG ++    ++  +   G R   ++Y I++  LC    +++ V   D M +M 
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC---SAERWVDAEDLMSQMI 462

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++   PN VT+N +I   C+KG +E A  LL ++L  G  P+  +Y  V + + + G
Sbjct: 463 EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAG 519



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 173/331 (52%), Gaps = 5/331 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++  V+  LC  G++  A  ++++M+  G +P    Y+++++  C +GG G    A 
Sbjct: 114 NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAV 173

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFC-KDENISAAMKVFEEMG-SHGIAAGVVTYNSLIN 302
            V +D+   G   +    N +++  C +  ++  A+++  ++  S G    VV+YN+++ 
Sbjct: 174 RVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLK 233

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC+  +      L +EM+  G  PNVVT N LI   C+  L E+   +   + + G +P
Sbjct: 234 GLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP 293

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            +  Y T++D  CKEG +E A  + + M   G+ P+V  YN ++ GL      E    ++
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+ +N      VT+NILV   C++G   + + LL++M    +    P+++TY  +I GF
Sbjct: 354 AEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML---EHGCVPDVITYTTVINGF 410

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           C++G +++A  LL  +   G  PN  +Y IV
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 176/341 (51%), Gaps = 16/341 (4%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +++G C+AG+L  A  +     S+ V P   TY  ++   C +G I     A +V  
Sbjct: 86  YNAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIA---DALSVLD 139

Query: 249 DMVENGILPNEVTFNTLIDGFCK---DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +M   G  P    ++ +++  C         +A++V +++   G A  V   N ++N +C
Sbjct: 140 EMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVC 199

Query: 306 -VDGKLDEAVA-LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
              G +DEA+  LRD   + G  P+VV+ NA++ G C  K   + + L +++   G  P+
Sbjct: 200 DQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPN 259

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+T+NTLI   C+ G  E    +   M+D G  PD+  Y  ++ G+ +EG++E    I++
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGF 482
            + + G++  +V YN ++  LC   + ++A  LL EMF    +   P + VT+N+L+  F
Sbjct: 320 RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF----DNDCPLDDVTFNILVDFF 375

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           CQ G +     LL ++LE G +P+  TY  V     ++G I
Sbjct: 376 CQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLI 416



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 195/414 (47%), Gaps = 57/414 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---------- 118
           +L  L +AK++ +++  +   V+ G   +V T     +T    LCRN +           
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT----FNTLIGYLCRNGLFERVHQVLAQM 286

Query: 119 ------IDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
                  D+ M A V     K     +  E   R   YGLK +V+  N +L+ L    ++
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E  E +  EM      L+  +FN +++  C+ G + +  +++E M   G  P V+TY  +
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 228 IDGYCKKGGIG--------------------------------KMYKADAVFKDMVENGI 255
           I+G+CK+G I                                 +   A+ +   M+E G 
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VTFNT+I+  CK   +  A+++ ++M  +G +  +++Y+++I+GL   GK DEA+ 
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + M+  G+ PN +  +++ +   K+  + +   +FD+I +  +    + YN +I + C
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           K G  + A      M+  G +P+ STY  LI GL+ EG V+  + ++ EL + G
Sbjct: 587 KRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 33/228 (14%)

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           NA+++G+C+   +  AR L   +    + P+  TY  ++ A C  GR+ DA ++ + M  
Sbjct: 87  NAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRN---IMNELVNNGMRAGLVTYNILVGALCKDGK 449
           RG  P    Y+ ++      G   G R+   ++ +L   G    +   N+++ A+C  G 
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 450 SKKAVSLLDEMFKMEKEKKW-----PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           S      +DE  ++ ++        P++V+YN ++KG C   +      L+ E++  G  
Sbjct: 204 S------VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCP 257

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISGT 536
           PN  T+                  V  +M++ G  PDI  +   + G 
Sbjct: 258 PNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGV 305


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 213/382 (55%), Gaps = 9/382 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V+  + LL+   K G++EDV  V+ EM  + IE ++  +  +++ LCK GK  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +M+ M   G+ P VVTYN+LI+  CK+G +    +A  V K M E G+ P+ VT+N
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSV---KEAIGVLKKMSEKGVAPDVVTYN 294

Query: 264 TLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           TLI G      +  AM + EEM  G + +   VVT+NS+I GLC  G++ +A  +R  M 
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G   N+VT N LI G  +   V KA  L D+++  GL P   TY+ LI  +CK  +++
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + ++M DRG+ P++  Y  L+  +  +G +E  RN+ NE+ NN     +V Y+ ++
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMI 473

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK G  K A  LL  +     E   P+ VTY+++I  F + G +E ANG+L ++   
Sbjct: 474 HGACKAGDLKTAKELLKSIV---DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 502 GLIPNQTTYQIVREEMMEKGFI 523
           G +P+   +  + +    KG I
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEI 552



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 235/478 (49%), Gaps = 28/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYV 127
           LL +L   +      + L    + G       +  A+S      CR N++   +LM A  
Sbjct: 67  LLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC 126

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            +          +     G+++ V++   L+R L    + +    +  EM    IE N+ 
Sbjct: 127 ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVV 186

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            ++ +L G CK+G+      +  +M   G+ P VV Y  LID  CK   +GK  KA  V 
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK---VGKAKKAHGVM 243

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV  G+ PN VT+N LI+  CK+ ++  A+ V ++M   G+A  VVTYN+LI GL   
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303

Query: 308 GKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            ++DEA+ L +EM+     +KPNVVT N++I G C    + +A  +   + E G   +++
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN LI    +  ++  A  + + M   G+ PD  TY+ LI G  +   V+   ++++ +
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G+   L  Y  L+ A+C+ G  ++A +L +EM     +  +P ++V Y+ +I G C+
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-----DNNFPLDVVAYSTMIHGACK 478

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
            G L+ A  LL  ++++GL P+  TY I                V ++M   GF+PD+
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 209/398 (52%), Gaps = 9/398 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +  N ++   L+  Y K+ +     + F    + G++  V+    L+ +L K GK 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    V   M RR +E N+ ++N ++N +CK G + +A  +++ M   GV+P VVTYN L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 228 IDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I G      + +M +A  + ++MV  +N + PN VTFN++I G C    +  A +V   M
Sbjct: 297 IKGL---SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    +VTYN LI GL    K+ +A+ L DEM + GL+P+  T + LI GFCK   V
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++A  L   + ++G+ P +  Y  L+ A C++G ME A  + N M D     DV  Y+ +
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTM 472

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G  + G+++  + ++  +V+ G+    VTY+I++    K G  + A  +L +   M  
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQ---MTA 529

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
               P++  ++ LI+G+  KG++     L+ E++ K +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 176/315 (55%), Gaps = 10/315 (3%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV---ENGILPN 258
           L +A+ +++ + S+      V+YN ++   C++G      +A A+ + M         PN
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRG---HHDRAGALLRAMSLEPHPACRPN 114

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V++  L+   C D     A+ +   M S G+ A VVTY +LI GLC   ++D+AV L  
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM  SG++PNVV  ++L+ G+CK    E    +F ++SE+G+ P V+ Y  LID+ CK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           + + A  + + M+ RG+ P+V TYN LI  + +EG+V+    ++ ++   G+   +VTYN
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  L    +  +A+ LL+EM + +   K PN+VT+N +I+G C  G++  A  +   +
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVK-PNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 499 LEKGLIPNQTTYQIV 513
            E G + N  TY ++
Sbjct: 354 EETGCMVNLVTYNLL 368



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 184/367 (50%), Gaps = 25/367 (6%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           ++ TG L+ SL    K  K    + M V+ G   +V T ++ L  C   +C+        
Sbjct: 221 VMYTG-LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT-YNVLINC---MCKEG------ 269

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR- 181
                 ++K  +G    K+  + G+   V++ N L++ L    + ++  ++ +EM R + 
Sbjct: 270 ------SVKEAIGV--LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321

Query: 182 -IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            ++ N+ +FN V+ GLC  G++ +A  +   M+  G    +VTYN+LI G  +   + K+
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR---VHKV 378

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA  +  +M   G+ P+  T++ LI GFCK   +  A  +   M   GI   +  Y  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  +C  G ++ A  L +EM  +    +VV  + +I+G CK   ++ A+ L   I ++GL
Sbjct: 439 LVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P  +TY+ +I+ + K G ME A  +   M   G LPDV+ ++ LI G S +G +  V  
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 421 IMNELVN 427
           ++ E++ 
Sbjct: 558 LIREMIT 564



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 31/250 (12%)

Query: 310 LDEAVALRDEMMASGLKPNV---VTSNALINGFCKKKLVEKARVLFDDIS---EQGLSPS 363
           L EA +L D +      P+V   V+ N ++   C++   ++A  L   +S        P+
Sbjct: 61  LGEATSLLDAL------PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPN 114

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            ++Y  L+ A C +   + A  +  SM   GV  DV TY  LI GL     V+    +M 
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+  +G+   +V Y+ L+   CK G+ +    +  EM +   E   P++V Y  LI   C
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIE---PDVVMYTGLIDSLC 231

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
           + GK + A+G+++ ++ +GL PN  TY +                V ++M EKG  PD+ 
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 528 GHMYNISGTS 537
            +   I G S
Sbjct: 292 TYNTLIKGLS 301


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 209/377 (55%), Gaps = 8/377 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+   ++LL A+ K  K++ V Y++++M+   I  NL + N +LN  C+  +L+ A   +
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L++G+C+     ++Y A  +F  MVE G  PN V +NT+IDG 
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGD---RIYDALYMFDRMVEMGYEPNVVIYNTIIDGL 196

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK + +  A+ +   M   GI    VTYNSLI+GLC  G+ D+A  +   M    + P+V
Sbjct: 197 CKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDV 256

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T NALI+   K+  + +A  L++++  + L P ++TY+ LI   C   R+++A  M   
Sbjct: 257 FTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGF 316

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G  PDV TY+ LI G  +   VE    +  E+   G+    VTY +L+   C+ GK
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
               +++ +E+FK M      PNI+TYNVL+ G C  GK+E A  +L ++ + G+  +  
Sbjct: 377 ----LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIV 432

Query: 509 TYQIVREEMMEKGFIPD 525
           TY I+   M + G + D
Sbjct: 433 TYNIIIRGMCKAGEVAD 449



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 228/444 (51%), Gaps = 15/444 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L   +V  +  P I  F   L    K  K+  V  ++  +       +LC  +I+++   
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN--- 124

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +  L      +    G +  +++   LL    +  +  D  Y++  M     E
Sbjct: 125 -CFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYE 183

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+  +N +++GLCK+ +++ A D++  M+  G+ P  VTYN LI G C  G   +   A
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSG---RWDDA 240

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +   M +  I P+  TFN LID   K+  IS A +++EEM    +   +VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  +LDEA  +   M++ G  P+VVT + LING+CK K VE    LF ++S++G+  +
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TY  LI  YC+ G++  A  +   M+  GV P++ TYN L+ GL   G +E    I+ 
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  +GM A +VTYNI++  +CK G+   A    D    +  +   P+I TY  ++ G  
Sbjct: 421 DMQKSGMDADIVTYNIIIRGMCKAGEVADA---WDLYCSLNLKGLTPDIWTYTAMMLGLY 477

Query: 484 QKGKLEDANGLLNELLEKGLIPNQ 507
           +KG   +A+ L  ++ E G++PN+
Sbjct: 478 KKGLRGEADALFRKMKEDGILPNE 501



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 3/219 (1%)

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           KLD+++ L   M+     P++   + L++   K K  +    L++ +   G+  ++ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            L++ +C+  ++  A +    M+  G  PD+ T+  L+ G  R   +     + + +V  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +V YN ++  LC   KSK+  + LD + +ME +   P+ VTYN LI G C  G+ 
Sbjct: 181 GYEPNVVIYNTIIDGLC---KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +DA  +++ + ++ + P+  T+  + +  +++G I + E
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAE 276


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 35/399 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    KEG       ++ EM +R I  +L ++N V+N LCKA  ++KA  I+  M  
Sbjct: 220 NTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVD 279

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV P   TYN LI GY      G+  +A  V K M   GILP+ VT N+L+   CK   
Sbjct: 280 KGVLPDNWTYNSLIYGY---SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A  VF+ M   G    + +Y  ++NG    G L +   L + M++ G+ P+    N 
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI  + K  ++++A ++F+++ EQG+ P V+TY+T+I A C+ G+M+DA    N M+D+G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V P +STY+ LI G    G++   ++++ +++N GMR  +  +N ++  LCK G+   A 
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516

Query: 455 SLLDEMF----------------------KMEKEKK----------WPNIVTYNVLIKGF 482
           ++ D                         KME   +           PN+V Y  L+ G+
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           C+ G++++   L  E+L KG+ P+ T Y I+   + + G
Sbjct: 577 CKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  + + ++ LM +  K+ K     + F      G K+ + S   +L     +G   
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           D+  ++  M    I  +   FN ++    K G L++A+ I  +M+  GV P VVTY+ +I
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVI 433

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
              C+   IGKM  A   F  M++ G+ P+  T++ LI GFC   ++  A  +  +M + 
Sbjct: 434 AALCR---IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK 490

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   +  +N +IN LC  G++ +A  + D  ++ GL PNV+  N L++G+C    +E A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   +L +G+ P  + YN ++ G
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + G     +   +E+  +G+     TY+I++G L K+  S +A+ L  E+  M  +  
Sbjct: 611 LFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKI- 669

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             +I T N++I G  Q  ++E+A  L   +   GL+P+  TY I+   ++++G + + +
Sbjct: 670 --DITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+     + N L+      G++++   V K+M  + I  ++ + N ++  LCK GK+ 
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A D+ + M   G    + +Y I+++GY  KG +  + +   +F  M+ +GI P+   FN
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTE---LFNLMLSDGIAPDSHIFN 395

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI  + K   +  A  +F EM   G+   VVTY+++I  LC  GK+D+AV   ++M+  
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P++ T + LI GFC    + KA+ L   +  +G+ P +  +N +I+  CK GR+ DA
Sbjct: 456 GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDA 515

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + +  +  G+ P+V  YN L+ G    G +E    + + +V+ G++  +V Y  LV  
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G+  + +SL  E+  + K  K P+   YN+++ G  Q G+   A    +E+ E G+
Sbjct: 576 YCKVGRIDEGLSLFREI--LHKGIK-PSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632

Query: 504 IPNQTTYQIV 513
             ++ TY IV
Sbjct: 633 AMDRYTYSIV 642



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 195/354 (55%), Gaps = 25/354 (7%)

Query: 192 VLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           +L GLC+A +  +A DI+   M  LG  P V +Y I++   C     G+   AD + + M
Sbjct: 149 LLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQ---ADELLRMM 205

Query: 251 VENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            E G   LPN V +NT+IDGF K+ +++ A  +F EM   GI+  + TYN ++N LC   
Sbjct: 206 AEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKAR 265

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +D+A A+  +M+  G+ P+  T N+LI G+      ++A  +   ++ QG+ P V+T N
Sbjct: 266 AMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLN 325

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +L+ + CK G+++DA  + +SM  +G   D+ +Y  ++ G + +G +  +  + N ++++
Sbjct: 326 SLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD 385

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+      +N+L+ A  K G   +A  + +EM +   E   P++VTY+ +I   C+ GK+
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVE---PDVVTYSTVIAALCRIGKM 442

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
           +DA    N+++++G+ P+ +TY  + +                +MM KG  PDI
Sbjct: 443 DDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 230/438 (52%), Gaps = 11/438 (2%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           L+ +   G    ++ +F+ +   SD +  +S I ++L+ AY K          F    + 
Sbjct: 363 LNGYATKGCLVDLTELFNLM--LSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  V++ + ++ AL + GK +D    + +M  + +  ++ +++F++ G C  G L KA
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  M + G+ P +  +N +I+  CK   +G++  A  +F   +  G+ PN + +NTL
Sbjct: 481 KDLVLQMMNKGMRPDIGCFNFIINNLCK---LGRVMDAQNIFDFTISIGLHPNVMVYNTL 537

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  E++  G+
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+    N +++G  +      A+V F +++E G++    TY+ ++    K    ++A  
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   +    V  D++T N +IAG+ +   VE  +++   +  +G+   +VTY+I++  L 
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717

Query: 446 KDGKSKKAVSLLDEMF-KMEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K+G  ++A    D+MF  ME    + PN    N +++   +K ++  A   L+++ E+  
Sbjct: 718 KEGLVEEA----DDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSF 773

Query: 504 IPNQTTYQIVREEMMEKG 521
             + +T  ++ +    KG
Sbjct: 774 SLDHSTTTLLIDLFSSKG 791



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 57/324 (17%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P   T+  L+D   +       +  F ++   G+    +  ++L+ GLC   +  EA+ +
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 317 --------------------------------RDE---MMASG---LKPNVVTSNALING 338
                                            DE   MMA G     PN V  N +I+G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           F K+  V KA  LF+++ ++G+SP + TYN +++A CK   M+ A A+   M+D+GVLPD
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             TYN LI G S  G  +    +  ++ + G+   +VT N L+ +LCK GK K A  + D
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ------- 511
            M  M+ +K   +I +Y +++ G+  KG L D   L N +L  G+ P+   +        
Sbjct: 346 SM-AMKGQKT--DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 512 ---------IVREEMMEKGFIPDI 526
                    I+  EM E+G  PD+
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDV 426



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 28/202 (13%)

Query: 348 ARVLFDDISE----QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           A  LF+ +S     + LSP++ TY  L+D   +  R +   A    +L  G+  D    +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 404 CLIAGLSR-EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
            L+ GL   +   E +  +++ + + G    + +Y I++ +LC D KS +A    DE+ +
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQA----DELLR 203

Query: 463 MEKEKK---WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--------- 510
           M  E      PN V YN +I GF ++G +  A  L NE++++G+ P+ +TY         
Sbjct: 204 MMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK 263

Query: 511 -------QIVREEMMEKGFIPD 525
                  + +  +M++KG +PD
Sbjct: 264 ARAMDKAEAILRQMVDKGVLPD 285


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 257/511 (50%), Gaps = 41/511 (8%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L  +  DP L LR+F +        HS      L+H+LV A  +    S   +     + 
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASS--LLQTLLLRA 134

Query: 96  TSVSTIFHALSTCSDSLCR--NSIIIDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVL 152
              S +F AL +C +  C+  +S   D+L+  YV++ +   G   FK       L   V 
Sbjct: 135 LKPSEVFDALFSCYEK-CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVR 193

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           + + LL  LVK   F     ++ +M    I  ++  +  V+  LC+   L++A +++  M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           ++ G    +V YN+LIDG CKK    K+++A  + KD+    + P+ VT+ TL+ G CK 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKK---QKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKV 310

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +     +++ +EM     +      +SL+ GL   GK++EA+ L   +   G+ PN+   
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           NALI+  CK +  ++A +LFD + + GL P+ +TY+ LID +C+ G+++ A +    M+D
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G+ P V  YN LI G  + G++    ++M E++N  +   +VTY  L+G  C  GK  K
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 453 AVSLLDEM----------------------------FKMEKE-KKW---PNIVTYNVLIK 480
           A+ L  EM                             K+  E  +W   PN VTYNV+I+
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           G+C++G +  A   LNE++EKG++P+  +Y+
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 217/438 (49%), Gaps = 35/438 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+    K  +  +G E            S  + + L+  L K GK E+   + K +    
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  N+  +N +++ LCK    ++A  + + M  +G+ P  VTY+ILID +C++G   K+ 
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG---KLD 419

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A +   +M++ G+ P+   +N+LI+G CK  +ISAA  +  EM +  +   VVTY SL+
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLM 479

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C  GK+++A+ L  EM   G+ P++ T   L++G  +  L+  A  LF +++E  + 
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN +I+ YC+EG M  AF   N M+++G++PD  +Y  LI GL   G     +  
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS-------------------LLDEMFK 462
           ++ L         + Y  L+   C++GK ++A+S                   L+D   K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLK 659

Query: 463 MEKEKKW-------------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            +  K +             P+ V Y  +I    + G  ++A G+ + ++ +G +PN+ T
Sbjct: 660 HKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 510 YQIVREEMMEKGFIPDIE 527
           Y  V   + + GF+ + E
Sbjct: 720 YTAVINGLCKAGFVNEAE 737



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 215/466 (46%), Gaps = 59/466 (12%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC N +   +L+  + +  K            D GLK SV   N L+    K G     E
Sbjct: 398 LCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EM  +++E  + ++  ++ G C  GK+NKA  +  +M   G+ P + T+  L+ G 
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            + G I    K   +F +M E  + PN VT+N +I+G+C++ N+S A +   EM   GI 
Sbjct: 518 FRAGLIRDAVK---LFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR-- 349
               +Y  LI+GLC+ G+  EA    D +     + N +    L++GFC++  +E+A   
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634

Query: 350 -----------------VLFD----------------DISEQGLSPSVITYNTLIDAYCK 376
                            VL D                ++ ++GL P  + Y ++IDA  K
Sbjct: 635 CQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSK 694

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G  ++AF + + M++ G +P+  TY  +I GL + G V     + +++         VT
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVT 754

Query: 437 YNILVGALCKD-GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y   +  L K  G  KKAV L + + K        N  TYN+LI+GFC++G++E+A+ L+
Sbjct: 755 YGCFLDILTKGVGDMKKAVELHNAILK----GLLANTATYNMLIRGFCRQGRMEEASELI 810

Query: 496 NELLEKGLIPNQTTYQIVREE----------------MMEKGFIPD 525
             ++  G+ P+  TY  +  E                M EKG  PD
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 208/428 (48%), Gaps = 45/428 (10%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +  L+   VK     L  E F    + G++  V     ++R+L +       + +  +M+
Sbjct: 195 LSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQME 254

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK----K 234
               ++N+  +N +++GLCK  K+ +A  I +D+    + P VVTY  L+ G CK    +
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFE 314

Query: 235 GGI----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
            G+                            GK+ +A  + K + E G+ PN   +N LI
Sbjct: 315 VGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALI 374

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D  CK  N   A  +F+ MG  G+    VTY+ LI+  C  GKLD A++   EM+  GLK
Sbjct: 375 DSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLK 434

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+V   N+LING CK   +  A  L  ++  + L P+V+TY +L+  YC +G++  A  +
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  +G++P + T+  L++GL R G +     +  E+    ++   VTYN+++   C+
Sbjct: 495 YHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA----NGL------LN 496
           +G   KA   L+EM    ++   P+  +Y  LI G C  G+  +A    +GL      LN
Sbjct: 555 EGNMSKAFEFLNEMI---EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611

Query: 497 ELLEKGLI 504
           E+   GL+
Sbjct: 612 EICYTGLL 619



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 24/454 (5%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           LR S S      L+  L   +K  K+   L++  +  +F     IF   +   DSLC+  
Sbjct: 326 LRFSPSEAAVSSLVEGL---RKRGKVEEALNLVKRVAEFGVSPNIF-VYNALIDSLCKGR 381

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
              +  +L              F R G  GL  + ++ + L+    + GK +       E
Sbjct: 382 NFDEAELL--------------FDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    ++ ++  +N ++NG CK G ++ A  +M +M +  + P VVTY  L+ GYC K  
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK-- 485

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            GK+ KA  ++ +M   GI+P+  TF TL+ G  +   I  A+K+F EM    +    VT
Sbjct: 486 -GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN +I G C +G + +A    +EM+  G+ P+  +   LI+G C      +A+V  D + 
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           +     + I Y  L+  +C+EG++E+A ++   M  RGV  D+  Y  LI G  +  + +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ E+ + G++   V Y  ++ A  K G  K+A  + D M     E   PN VTY 
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI---NEGCVPNEVTYT 721

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +I G C+ G + +A  L +++     +PNQ TY
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTY 755



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 41/349 (11%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M  + + P+V T + L+ G  K    G    A  +F DM+  GI P+   +  +I   C+
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGL---AMELFDDMINVGIRPDVYIYTGVIRSLCE 239

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            +++S A ++  +M + G    +V YN LI+GLC   K+ EAV ++ ++    LKP+VVT
Sbjct: 240 LKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVT 299

Query: 332 SNALINGFC-----------------------------------KKKLVEKARVLFDDIS 356
              L+ G C                                   K+  VE+A  L   ++
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA 359

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E G+SP++  YN LID+ CK    ++A  + + M   G+ P+  TY+ LI    R G ++
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLD 419

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              + + E+++ G++  +  YN L+   CK G    A SL+ EM   + E   P +VTY 
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE---PTVVTYT 476

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            L+ G+C KGK+  A  L +E+  KG++P+  T+  +   +   G I D
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRD 525



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 183/402 (45%), Gaps = 16/402 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL H +      P I +F   L    + G       +F  ++  +  +  N +  ++++ 
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN--VKPNRVTYNVMIE 550

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +       FE      + G+     S   L+  L   G+  + +     + +   EL
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   +  +L+G C+ GKL +A  + +DM   GV   +V Y +LIDG  K       +K  
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLK-------HKDR 663

Query: 245 AVF----KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            VF    K+M + G+ P++V + ++ID   K  +   A  +++ M + G     VTY ++
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           INGLC  G ++EA  L  +M      PN VT    ++   K     K  V   +   +GL
Sbjct: 724 INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGL 783

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             +  TYN LI  +C++GRME+A  +   M+  GV PD  TY  +I+ L R  +V+    
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + N +   G+R   V YN L+   C  G+  KA  L +EM +
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 67/330 (20%)

Query: 61  HSLLLTGRLLHSLVVAKKYPK---------IRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
           H L LTG+   + V      K             LH F + GK         ALS C D 
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE------EALSVCQDM 638

Query: 112 LCRNSIIIDMLMLAY---------VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             R    +D+ ++ Y          K+ K  LG    K   D GLK   +    ++ A  
Sbjct: 639 GLRG---VDLDLVCYGVLIDGSLKHKDRKVFLGL--LKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS---------------- 206
           K G F++   ++  M       N  ++  V+NGLCKAG +N+A                 
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV 753

Query: 207 ------DIME----DMKSL---------GVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
                 DI+     DMK           G+     TYN+LI G+C++G   +M +A  + 
Sbjct: 754 TYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQG---RMEEASELI 810

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M+ +G+ P+ +T+ T+I   C+  ++  A++++  M   GI    V YN+LI+G CV 
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           G++ +A  LR+EM+  GLKPN  TS   I+
Sbjct: 871 GEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 258/562 (45%), Gaps = 67/562 (11%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYF-CWSTKELRASHSLLLTGR--LLHSLVVAKK 78
           S L N D  T  L L N +      L +F C    +    H   L     L+  L  A+K
Sbjct: 47  SLLSNLDSYTTNLVLSNPNLPTRSCLNFFKCLQKNQSLICHKPDLRAHVILISRLFKARK 106

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHAL-------STCSDSLCRNSIIIDMLMLAYVKNMK 131
           +  +++ L  +  +       + F +L           + LC      DML   YV N  
Sbjct: 107 FVVMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVEKLC------DMLFRVYVDNSM 160

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
              GF+ F      GLK    SC   L AL +  +       +K+M   ++++ + S   
Sbjct: 161 FEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTI 220

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK------------------ 233
           V++GLCK G++ +A D+M +M   G+ P VVTYN L++ Y K                  
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 234 --------------KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
                          G  GK+ +A+ VF+ M+E G+  +   F ++I   CK  N+  A 
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +F+E+   G+ A   TY +LI+G C  G+LD A  L +EM + GL  N+V  N LING+
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           CKK ++++A  + D + ++G    + TYNT+    CK  R E+A     +M+++GV P+ 
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            ++  +I    +EGN+     +  ++   G +  +VTYN L+    K GK K+A  L DE
Sbjct: 461 VSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDE 520

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
              ME      +I TY  L+ G C  GK+E+A  LLNE+  KGL  +  TY  +      
Sbjct: 521 ---MESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSK 577

Query: 514 ----------REEMMEKGFIPD 525
                      +EMM  G  PD
Sbjct: 578 EGRSEEAFRLYDEMMAAGLTPD 599



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 155/283 (54%), Gaps = 5/283 (1%)

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           NMK    F  F    + GL ++  +   L+      G+ +  E +  EM+ + +++NL  
Sbjct: 335 NMKR--AFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVI 392

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN ++NG CK G +++A  + + M+  G    + TYN +  G CK   + +  +A     
Sbjct: 393 FNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCK---LNRHEEAKRWLF 449

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            MVE G+ PN V+F  +ID  CK+ N+  A +VF++M   G    VVTYN+LI+G    G
Sbjct: 450 TMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKG 509

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           KL EA  L+DEM + G+  ++ T   L++G C    VE+A  L +++  +GL+ S++TY 
Sbjct: 510 KLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYT 569

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +I    KEGR E+AF + + M+  G+ PD   Y  L+A L +
Sbjct: 570 AIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 186/364 (51%), Gaps = 7/364 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ ++K   F  V+ +   +    D +  N+    +L+  Y  + K     + F++  
Sbjct: 255 TLVNAYIKIMDFEGVNEMLRLMEM--DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKML 312

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+++ +     ++    K G  +    ++ E+  R +  N  ++  +++G C +G+L+
Sbjct: 313 ERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLD 372

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV-TF 262
            A  ++ +M+S G+   +V +N LI+GYCKKG I +  +     +D++E     N++ T+
Sbjct: 373 AAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALR----MQDVMEKKGFENDIFTY 428

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NT+  G CK      A +    M   G+    V++  +I+  C +G L EA  +  +M  
Sbjct: 429 NTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKK 488

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G KPNVVT N LI+G+ KK  +++A  L D++   G++  + TY TL+   C  G++E+
Sbjct: 489 KGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEE 548

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N +  +G+   + TY  +I+GLS+EG  E    + +E++  G+      Y  LV 
Sbjct: 549 ALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVA 608

Query: 443 ALCK 446
            L K
Sbjct: 609 NLHK 612



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 19/315 (6%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +M  +   FK MVE  +     +   +IDG CK   +  A  +  EM   GI   VVTYN
Sbjct: 195 QMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYN 254

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L+N        +    +   M    +  N  T   LI  +     + +A  +F+ + E+
Sbjct: 255 TLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLER 314

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+   +  + ++I   CK G M+ AFA+ + + +RG++ +  TY  LI G    G ++  
Sbjct: 315 GVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAA 374

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++NE+ + G+   LV +N L+   CK G   +A+ + D    MEK+    +I TYN +
Sbjct: 375 EMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQD---VMEKKGFENDIFTYNTI 431

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
             G C+  + E+A   L  ++EKG+ PN  ++ I                V ++M +KG 
Sbjct: 432 AGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGE 491

Query: 523 IPDIEGHMYNISGTS 537
            P++  +   I G S
Sbjct: 492 KPNVVTYNTLIDGYS 506


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/402 (33%), Positives = 212/402 (52%), Gaps = 12/402 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  +    +G+  +  +C   + AL   G +ED   ++ +MK +  E N+ ++  +++
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC +G L  A  +   M   GV P  VTYN LI+   +   I   +    V   M  NG
Sbjct: 364 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF---VVLNLMGRNG 420

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+N +I G+C   +   AM V   M   G +A +VTYN++I G C  G    A+
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M   G KP+  +   LI GFCK   +E A  LF+++ + GL P+ +TY  LID Y
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+ +++ A ++   M   G  P+V TYN LI GL+++ N  G   +   ++  G+   +
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           VTY  ++  LCK+G +    SL  EMF KM ++   PN++TY+ LI+   Q+GK+E+A  
Sbjct: 601 VTYTAMIDGLCKNGST----SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           L  EL   GLIP++ TY  + E  +  G +     H +N  G
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVE----HAFNFLG 694



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 189/366 (51%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+  + + + LL  L + G    V   Y  M    ++ NL  +N V+N LCK G +  A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             IM+ +    +SP   TY  +I G+C+K  +     A  VF  M + G  PN VT++TL
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD---SALQVFNQMAKEGCEPNTVTYSTL 291

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C    ++ A  +  EM  HGI     T    I  LC  G  ++A  L  +M   G 
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGC 351

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNV T  ALI+G C   L++ A  LF  +S  G+ P+ +TYN LI+   +  R++ AF 
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M   G  P++ TYN +I G    G+ +    +MN ++  G  A LVTYN ++   C
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 446 KDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             G +  A+ +LD M     K  +W    +Y  LI GFC+  K+E A GL NE+++ GL 
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEW----SYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 505 PNQTTY 510
           PN+ TY
Sbjct: 528 PNEVTY 533



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+  + ++ N L+  LV+  + +    V   M R     N+ ++N ++ G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G   KA  +M +M   G S  +VTYN +I GYC  G      +   +   M + G  P+
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR---ILDLMRDGGCKPD 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E ++  LI GFCK   + +A  +F EM   G+    VTY +LI+G C D KLD A +L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  SG +PNV T N LI+G  K+     A  L   + E+G+ P+V+TY  +ID  CK G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A  M N M+++G LP++ TY+ LI  L +EG VE   N+  EL  +G+    +TY 
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            ++ A    GK + A + L  M K   +   P + TY VLIKG   +  L D
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQ---PTLWTYGVLIKGLKNEYLLAD 723



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 6/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++L + +        + F +    G + + ++ + L+  L   G+  +   + +EM    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +    +  LC  G    A  +  DMK+ G  P V TY  LI G C  G    + 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG---LLK 372

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M  +G+ PN VT+N LI+   ++  I  A  V   MG +G +  +VTYN +I
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C+ G   +A+ + + M+  G   N+VT N +I G+C       A  + D + + G  
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   +Y  LI  +CK  +ME AF + N M+D G+ P+  TY  LI G  ++  ++   ++
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  +  +G R  + TYN+L+  L K      A  L   M +   E  +PN+VTY  +I G
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE---EGIFPNVVTYTAMIDG 609

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C+ G    A  + N+++E+G +PN  TY  +   + ++G + + E
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 35/418 (8%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            + + R    G++ ++L  N ++ AL K+G   D E + K++    +  +  ++  ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------- 242
            C+   L+ A  +   M   G  P  VTY+ LI+G C  G + + +              
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319

Query: 243 -------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
                              A  +F DM   G  PN  T+  LI G C    +  A+ +F 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M   G+    VTYN+LIN L  + ++  A  + + M  +G  PN+VT N +I G+C   
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             +KA ++ +++ ++G S +++TYNT+I  YC  G    A  + + M D G  PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  +   +E    + NE+V++G+    VTY  L+   CKD K   A SLL+    M
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH---M 556

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++    PN+ TYNVLI G  ++     A  L   ++E+G+ PN  TY  + + + + G
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 183/424 (43%), Gaps = 32/424 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K  K    F  F    D GL  + ++   L+    K+ K +    + + MKR  
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++N +++GL K    + A ++ + M   G+ P VVTY  +IDG CK G      
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL-- 618

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M+E G LPN +T+++LI    ++  +  A  +F E+  HG+    +TY  +I
Sbjct: 619 -ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
               + GK++ A      M+ +G +P + T   LI G   + L+   R            
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 350 ------------VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
                       V+   ++E     SV   N L+      GR  +A  +  SM+ +G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D   YN L+  L R  NV+    +   +   G    L  Y  L+ ALC+  + K+A    
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 458 DEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           + M      + W P+ V   VLI G  + G  +     L+ +  +  +P+   Y I+  E
Sbjct: 858 ENMLM----RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILARE 913

Query: 517 MMEK 520
             +K
Sbjct: 914 ASKK 917



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI      E ++  M   + +   G+  G+  Y++L+  L   G     +     M++ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++PN++  NA+IN  CK   V  A  +   + E  +SP   TY ++I  +C++  ++ A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M   G  P+  TY+ LI GL   G V    +++ E++ +G+     T    + AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G  + A  L  +M     E   PN+ TY  LI G C  G L+ A GL + +   G+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCE---PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387

Query: 505 PNQTTY 510
           PN  TY
Sbjct: 388 PNTVTY 393


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 220/413 (53%), Gaps = 6/413 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  NS+ ++ L+  + K+ +        +     GL  +  S + ++  L  + +F 
Sbjct: 389 SKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFV 448

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
              +  +EM  R +  N      +++GLCKAGK  +A ++   +   G  P +VT N LI
Sbjct: 449 TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALI 508

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G CK G + +  K   + +DM+E G++ + +T+NTLI G CK+  +    ++ EEM   
Sbjct: 509 HGLCKAGNMQETLK---LLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   + T+N L++GLC   K+DEA  L  E   +G  PNV T   +I+G+CK   VE+ 
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L +++  + L  + + YN+LI AYC  G M  AF +R+ M  RGVL   +TY+ L+ G
Sbjct: 626 ENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHG 685

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L   G V+  +++++E+   G+   +V Y  ++G   K G+  K   +L E   M     
Sbjct: 686 LCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQE---MSSHNI 742

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            PN  TY ++I GFC+ GK ++A  LLNE+ EKG++P+  TY      + ++G
Sbjct: 743 HPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEG 795



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 221/432 (51%), Gaps = 40/432 (9%)

Query: 118 IIDMLMLAYVKNMKPHLGF----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           I D+L+  Y    K HLGF    + F      GL  S+ +C  LL +LVK  + +    V
Sbjct: 185 IADLLVHVYSTQFK-HLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEV 243

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y  +    I  ++  F+ ++N  CK  + + A  +   M+ LGV+P VVTYN +I G CK
Sbjct: 244 YDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCK 303

Query: 234 KGGIGKMYK--------------------------------ADAVFKDMVENGILPNEVT 261
            G + + Y+                                A+ V K+M E G +PNEV 
Sbjct: 304 SGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVV 363

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NTLIDG+CK  NIS A+K+ ++M S GI+   VT NSLI G C   ++ +A  + +EM+
Sbjct: 364 YNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMI 423

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL  N  + + +IN  C K     A     ++  + L P+     TL+   CK G+  
Sbjct: 424 GRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQG 483

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   +L +G +P++ T N LI GL + GN++    ++ +++  G+    +TYN L+
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI 543

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK+GK K+   L +EM    K+   P+I T+N+L+ G C   K+++A+ L +E  + 
Sbjct: 544 SGCCKEGKVKEGFELKEEMV---KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600

Query: 502 GLIPNQTTYQIV 513
           G +PN  TY ++
Sbjct: 601 GYVPNVYTYGVM 612



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 188/370 (50%), Gaps = 51/370 (13%)

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+D+   +   G+ P + T   L+    K   + K Y+   V+  +   GI+P+   F+T
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYE---VYDFICLGGIIPDVHLFST 261

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I+ FCK      A+ +F +M   G+A  VVTYN++I+GLC  G+LDEA   +++M+   
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+++T +  ING  K + +++A  +  ++SE G  P+ + YNTLID YCK G + +A 
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +R+ ML +G+ P+  T N LI G  +   +    N++ E++  G+     ++++++  L
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 445 CKDGKSKKAVSLLDEMF-----------------------KMEKEKKW---------PNI 472
           C   +   A+  + EM                        + E  + W         PNI
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREE 516
           VT N LI G C+ G +++   LL ++LE+GL+ ++ TY                  ++EE
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 517 MMEKGFIPDI 526
           M++KG  PDI
Sbjct: 562 MVKKGIQPDI 571



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 196/391 (50%), Gaps = 6/391 (1%)

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           KF  V+ +         +L  N  ++  L+    K  K     E + R    G   ++++
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            N L+  L K G  ++   + ++M  R +  +  ++N +++G CK GK+ +  ++ E+M 
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMV 563

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G+ P + T+N+L+ G C      K+ +A  ++ +  +NG +PN  T+  +IDG+CK  
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNAD---KIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKAN 620

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +     +  E+ S  +    V YNSLI   C++G ++ A  LRD+M + G+  +  T +
Sbjct: 621 KVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +L++G C   LV+ A+ L D++ ++GL P+V+ Y T+I  Y K G+M     +   M   
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSH 740

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            + P+  TY  +I G  + G  +    ++NE+   G+    VTYN     LCK+GK ++A
Sbjct: 741 NIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEA 800

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
             + DE   M       + +TY  LI G  Q
Sbjct: 801 FKVCDE---MSSGAVCLDEITYTTLIDGCHQ 828



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 21/270 (7%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH L  A K  +     H   KNG   +V T                ++ID     Y K
Sbjct: 577 LLHGLCNADKIDEASRLWHECKKNGYVPNVYTY--------------GVMID----GYCK 618

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K   G           L+ + +  N L+RA    G       +  +MK R + L+  +
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ +++GLC  G ++ A  ++++M+  G+ P VV Y  +I GY K   +G+M K + V +
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSK---LGQMNKVNIVLQ 735

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M  + I PN+ T+  +IDGFCK      A K+  EM   GI    VTYN+  NGLC +G
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEG 795

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALING 338
           K++EA  + DEM +  +  + +T   LI+G
Sbjct: 796 KVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 245/482 (50%), Gaps = 49/482 (10%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           SL+   +LLH L  A+++   R+ L     + +      +F  L+        +++  D+
Sbjct: 99  SLVSHAQLLHILARARRFHDARALLSSLPPHAE-----PLFPHLAEVYRDFTFSAVSFDL 153

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK--------------- 166
           L+ A+    +       F   G  G + S+ SCN+LL  LV+ G                
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 167 ---------------------FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
                                 + VE+V +EM+   +E+NL +++ V++  C  G    A
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFV-EEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNT 264
             I+E ++  G+SP VVTY +L+ GYCK    G+M +A+ V K+M E G I+ +EV +  
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKD---GRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I+G+C+   +  A +V  EM   GI   +  YN++INGLC  G+++E   +  EM   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+  + N LI+G+C++  + KA  +   +   GL+ + +TYNTL+  +C    ++DA 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ML RGV P+  + + L+ GL + G  E   N+  E +  G+   ++T+N ++  L
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G+  +A  LLD   +M++ +  P+ +TY  L  G+C+ G+L  A  L+N++   G  
Sbjct: 510 CKIGRMAEAEELLD---RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 505 PN 506
           P+
Sbjct: 567 PS 568



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 224/451 (49%), Gaps = 65/451 (14%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F   KR    G+  + +SC+ LL  L K GK E    ++KE   R +  N+ +FN V+
Sbjct: 451 LWFLMLKR----GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG--------------- 238
           NGLCK G++ +A ++++ MK L   P  +TY  L DGYCK G +G               
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 239 -----------------KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                            + +K + +  +M   G+ PN VT+  LI G+CK+ N+  A  +
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS--------- 332
           + EM ++G+   V   ++L++    +GK+DEA  +  +++   + P    S         
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 333 -----------------NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                            N +I G CK   +  A+ LF+ +  +   P   TY++LI    
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G +++AF++R+ ML  G+ P++ TYN LI GL + G +    N+ N+L + G+    +
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN L+   CK+GK+ +A  L     KM +E   P ++TY++LI G C +G +E+A  LL
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQ---KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLL 863

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           ++++E  + PN  TY  +    ++ G + +I
Sbjct: 864 DQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 218/490 (44%), Gaps = 125/490 (25%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    + G+ +D   V  EM+   I +NL  +N ++NGLCK G++ +   ++++M+ +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYK--------------------------------AD 244
           + P   +YN LIDGYC++G + K ++                                A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++  M++ G+ PNE++ +TL+DG  K      A+ +++E  + G+A  V+T+N++INGL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK----------------------- 341
           C  G++ EA  L D M      P+ +T   L +G+CK                       
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 342 ------------KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                        K   K   +  ++S +GLSP+++TY  LI  +CKEG + +A  +   
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL--------------- 434
           M++ G+ P+V   + L++   +EG V+    ++ +LVN  M  G                
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 435 -----------VTYNILVGALCKDGKSKKAVSL--------------------------- 456
                      V +N+++  LCK G+   A SL                           
Sbjct: 690 TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749

Query: 457 -LDEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            +DE F     M      PNI+TYN LI G C+ GKL  A  L N+L  KG+ PN  TY 
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 512 IVREEMMEKG 521
            + +E  ++G
Sbjct: 810 TLIDEYCKEG 819



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 198/439 (45%), Gaps = 93/439 (21%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I    L+    K  K       +K     GL  +V++ N ++  L K G+  + E + 
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKL-------------------------------- 202
             MK  R   +  ++  + +G CK G+L                                
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIA 582

Query: 203 ---NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------- 237
              +K +DI  +M + G+SP +VTY  LI G+CK+G +                      
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642

Query: 238 ----------GKMYKADAVFKDMVENGILPN--------------------------EVT 261
                     GK+ +A+ V + +V   ++P                            V 
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N +I G CK   I+ A  +FE + +        TY+SLI+G    G +DEA +LRD M+
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           ++GL PN++T N+LI G CK   + +A  LF+ +  +G+SP+ ITYNTLID YCKEG+  
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +AF ++  M++ G+ P V TY+ LI GL  +G +E    ++++++ N +    +TY  L+
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882

Query: 442 GALCKDGKSKKAVSLLDEM 460
               K G  ++   L DEM
Sbjct: 883 HGYIKSGNMEEISKLYDEM 901



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 29/312 (9%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    L+  + K    H     +    + G+  +V  C+ L+    KEGK ++  
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 172 YVYKEMKR---------RRIELNLDS-----------------FNFVLNGLCKAGKLNKA 205
            V +++             IE++  S                 +N ++ GLCK+G++  A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E +++    P   TY+ LI G    G I + +    V   M+  G+ PN +T+N+L
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV---MLSAGLTPNIITYNSL 776

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   +S A+ +F ++ S GI+   +TYN+LI+  C +GK  EA  L+ +M+  G+
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGI 836

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P V+T + LI G C +  +E+A  L D + E  + P+ ITY TLI  Y K G ME+   
Sbjct: 837 QPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 896

Query: 386 MRNSMLDRGVLP 397
           + + M  RG+LP
Sbjct: 897 LYDEMHIRGLLP 908



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  L K G+  D + +++ ++ +R   +  +++ +++G   +G +++A  + + M S
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P ++TYN LI G CK G   K+ +A  +F  +   GI PN +T+NTLID +CK+  
Sbjct: 764 AGLTPNIITYNSLIYGLCKSG---KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            + A K+ ++M   GI   V+TY+ LI GLC  G ++EA+ L D+M+ + + PN +T   
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LI+G+ K   +E+   L+D++  +GL P+
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPT 909



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 9/269 (3%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           V+F+ L+        +S+A+ VF+ MG  G    + + N L+N L   G    A  +  +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +G+ P+  T   +   +C+   V +A    +++   GL  +++ Y+ ++D YC  G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYN 438
            EDA  +  S+  +G+ P+V TY  L+ G  ++G +E    ++ E+   G +    V Y 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++   C+ G+   A  + +E   M       N+  YN +I G C+ G++E+   +L E+
Sbjct: 329 MMINGYCQRGRMDDATRVRNE---MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 499 LEKGLIPNQTTYQIV-----REEMMEKGF 522
            + G+ P++ +Y  +     RE  M K F
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAF 414



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 99/199 (49%), Gaps = 4/199 (2%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + V+ + L+        +  A  +FD + + G  PS+ + N L++   + G    A  + 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M   GVLPD  T   +     R+G V      + E+   G+   LV Y+ ++   C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPN 506
           G ++ A  +L+    ++++   PN+VTY +L+KG+C+ G++E+A  ++ E+ E G ++ +
Sbjct: 267 GWTEDARRILE---SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323

Query: 507 QTTYQIVREEMMEKGFIPD 525
           +  Y ++     ++G + D
Sbjct: 324 EVAYGMMINGYCQRGRMDD 342


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 218/416 (52%), Gaps = 37/416 (8%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           A K+ G  G   +V+  + ++  L KEGK  +   ++ EM ++ +  N+ ++N V++ LC
Sbjct: 200 AVKQGG--GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALC 257

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           KA  ++KA  I+  M   GV P  VTYN LI GY     +G+  +A  +FK+M   G++P
Sbjct: 258 KARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYST---LGQWKQAVRMFKEMTSRGVIP 314

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N VT +T +   CK   I  A + F+ M + G    +++Y++L++G    G L +   L 
Sbjct: 315 NTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLF 374

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           + M+  G+ PN    N L+NG+ K  +V +A  +F+D+ ++GL+P V+TY  +I A+C+ 
Sbjct: 375 NLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRM 434

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G M+DA    N M+D+GV P+ + Y CLI G    G++     ++ E+ N G+   ++++
Sbjct: 435 GSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494

Query: 438 NILVGALCKDGKSKKAVSLLD----------------------------EMFK----MEK 465
             L+  LCK+G+  +A  + D                            E F+    M  
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS 554

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               P+IVTY  L+ G C+ G+++D   L  ELL KG+ P   TY I+ + +   G
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAG 610



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 240/477 (50%), Gaps = 23/477 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNG---KFTSVSTIFHALST--------------CSDS 111
           ++H+L  A+   K +  L   V NG      + +T+ H  ST               S  
Sbjct: 252 VIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG 311

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  N++     +    K+ +     E F      G K +++S + LL      G   D+ 
Sbjct: 312 VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS 371

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++  M R  I  N   FN ++NG  K G + +A  I EDM+  G++P V+TY  +I  +
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   +G M  A   F  M++ G+ PN   +  LI GFC   ++  A ++  E+ + G+ 
Sbjct: 432 CR---MGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG 488

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             ++++ SLIN LC +G++ EA  + D ++ +G K +V    +LI+G+C    + +A  +
Sbjct: 489 PCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRV 548

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D +   G+ P ++TY TL++  CK GR++D   +   +L +GV P   TY  ++ GL  
Sbjct: 549 HDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFH 608

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G     + +  E++ +G+   + TY+IL+  LC++  +++A+++  ++  M  +    +
Sbjct: 609 AGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKF---D 665

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           IV  N++I    +  + E+A GL   + + GL+P   TY I+ E ++++G + + EG
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEG 722



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 187/344 (54%), Gaps = 7/344 (2%)

Query: 192 VLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           +L GLC A + ++A D++   M  LG  P  ++Y+ ++   C  G     +  D +   +
Sbjct: 144 LLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGR--SQWALDILRMAV 201

Query: 251 VENGILP-NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
            + G  P N V ++T++ G  K+  +  A  +F EM   G+   VVTYNS+I+ LC    
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D+A  +  +M+ +G++P+ VT N LI+G+      ++A  +F +++ +G+ P+ +T +T
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            +   CK GR+E+A    +SML +G   ++ +Y+ L+ G +  G +  + N+ N +V +G
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +      +NILV    K G  ++A+ + ++M   +K    P+++TY  +I  FC+ G ++
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDM---QKRGLNPDVLTYLAVIHAFCRMGSMD 438

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           DA    N +++KG+ PN   YQ + +     G +   E  +Y I
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 199/444 (44%), Gaps = 37/444 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + LH +   G    +S +F+ +    D +  N  + ++L+  Y K          F+   
Sbjct: 356 TLLHGYATAGCLVDMSNLFNLM--VRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL   VL+   ++ A  + G  +D    +  M  + +E N   +  ++ G C  G L 
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG--------------------------- 236
           KA +++ ++++ G+ P ++++  LI+  CK+G                            
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533

Query: 237 -----IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                IGKM +A  V   MV  GI P+ VT+ TL++G CK+  I   + +F E+   G+ 
Sbjct: 534 DGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK 593

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TY  +++GL   G+   A  +  EM+ SG+   + T + L+ G C+    E+A  +
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  +    +   ++  N +I    K  R E+A  +  S+ D G++P V TY  ++  L +
Sbjct: 654 FQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIK 713

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           EG+VE    + + ++ +G+       N++V  L + G+  KA      M +++ +     
Sbjct: 714 EGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIY---MCRVDGKSILFE 770

Query: 472 IVTYNVLIKGFCQKGKLEDANGLL 495
             T ++L+  F  KGK  +   LL
Sbjct: 771 ASTASMLLSLFSCKGKHREHLNLL 794



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 57/325 (17%)

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV- 314
           LP   T++ LID  C+   +  A   F  +   G+ A V+  +SL+ GLC   + DEAV 
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 315 ALRDEMMASGLKP-------------------------------------NVVTSNALIN 337
            L   M   G  P                                     NVV  + +++
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  K+  V +A  LF ++++QG+ P+V+TYN++I A CK   ++ A  +   M+  GV P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D  TYN LI G S  G  +    +  E+ + G+    VT +  V  LCK G+ ++A    
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----- 512
           D M  + K  K  NI++Y+ L+ G+   G L D + L N ++  G++PNQ  + I     
Sbjct: 340 DSM--LAKGHKL-NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396

Query: 513 -----------VREEMMEKGFIPDI 526
                      + E+M ++G  PD+
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDV 421



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRN 420
           P+V TY+ LID  C+  R++ AFA    +L +G+  DV   + L+ GL       E V  
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLI 479
           + + +   G     ++Y+ ++ ++C DG+S+ A+ +L     +++    P N+V Y+ ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILR--MAVKQGGGCPCNVVVYSTVV 218

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            G  ++GK+ +A  L +E+ ++G+ PN  TY  V   + +   +   +G +  + G
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 243/482 (50%), Gaps = 28/482 (5%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTS---VSTIFHALSTCSDSLCRNSII 118
           +L   G ++ +L    +     S L    K+G   +     T+ H+LS C+       ++
Sbjct: 210 TLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 269

Query: 119 IDMLMLAYVKNMKPH----LGFEAFKRAGD----------YGLKSSVLSCNQLLRALVKE 164
            +M ++  V + +      LG   F R  +           G     ++   L+  L K 
Sbjct: 270 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKI 329

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVT 223
           G+ +  + ++  + +    +    FN +++G    G+L+ A  ++ DM  S G+ P V T
Sbjct: 330 GRVDAAKDLFYRIPKPTSVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LI GY KKG +G    A  V +DM   G  PN  ++  L+DGFCK   I  A  +  
Sbjct: 386 YNSLIYGYWKKGLVGL---ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM + G+    V +N LI+  C + ++ EAV +  EM   G KP+V T N+LI+G C+  
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            ++ A  L  D+  +G+  + +TYNTLI+A+ + G +++A  + N M+ +G L D  TYN
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYN 562

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI GL R G V+  R++  +++ +G+    ++ NIL+  LC+ G  ++AV    EM   
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVL- 621

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                 P+IVT+N LI G C+ G++ED   +  +L  +G+ P+  TY  +   + + GF+
Sbjct: 622 --RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFV 679

Query: 524 PD 525
            D
Sbjct: 680 YD 681



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 205/367 (55%), Gaps = 7/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+ +D + V  +M     I  ++ ++N ++ G  K G +  A +++ DM+
Sbjct: 351 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           + G  P V +Y IL+DG+CK G I + Y    +  +M  +G+ PN V FN LI  FCK+ 
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEAYN---LLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            I  A+++F EM   G    V T+NSLI+GLC   ++  A+ L  +M++ G+  N VT N
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LIN F ++  +++AR L +++  QG     ITYN+LI   C+ G ++ A ++   ML  
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G++P   + N LI GL R G VE       E+V  G    +VT+N L+  LC+ G+ +  
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +++     K++ E   P+ VTYN L+   C+ G + DA  LL+E +E G +PN  T+ I+
Sbjct: 648 LTMFR---KLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 514 REEMMEK 520
            + ++ +
Sbjct: 705 LQSLVPQ 711



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 192/345 (55%), Gaps = 6/345 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG+   V + N L+    K+G       V ++M+ +  + N+ S+  +++G CK GK+++
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +++ +M + G+ P  V +N LI  +CK+    ++ +A  +F++M   G  P+  TFN+
Sbjct: 437 AYNLLNEMSADGLKPNTVGFNCLISAFCKEH---RIPEAVEIFREMPRKGCKPDVYTFNS 493

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G C+ + I  A+ +  +M S G+ A  VTYN+LIN     G++ EA  L +EM+  G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              + +T N+LI G C+   V+KAR LF+ +   GL PS I+ N LI+  C+ G +E+A 
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             +  M+ RG  PD+ T+N LI GL R G +E    +  +L   G+    VTYN L+  L
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWL 673

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           CK G    A  LLDE     ++   PN  T+++L++    +  L+
Sbjct: 674 CKGGFVYDACLLLDEGI---EDGFVPNDRTWSILLQSLVPQETLD 715



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 190/361 (52%), Gaps = 4/361 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H FV +G+      +   + T S  +  +    + L+  Y K     L  E  +   
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVT-SYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G K +V S   L+    K GK ++   +  EM    ++ N   FN +++  CK  ++ 
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIP 470

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A +I  +M   G  P V T+N LI G C+   + ++  A  + +DM+  G++ N VT+N
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVVANTVTYN 527

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI+ F +   I  A K+  EM   G     +TYNSLI GLC  G++D+A +L ++M+  
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+ ++ N LING C+  +VE+A     ++  +G +P ++T+N+LI+  C+ GR+ED 
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   +   G+ PD  TYN L++ L + G V     +++E + +G      T++IL+ +
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707

Query: 444 L 444
           L
Sbjct: 708 L 708



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 198/398 (49%), Gaps = 38/398 (9%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           Y  + +  S N +L  LV     +    V+ +M  R+I   L +F  V+  LC   +++ 
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++ DM   G  P  V Y  LI    K     ++ +A  + ++M   G +P+  TFN 
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSK---CNRVNEALQLLEEMFLMGCVPDAETFND 286

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC----VD------------- 307
           +I G CK + I+ A K+   M   G     +TY  L+NGLC    VD             
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPT 346

Query: 308 --------------GKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLF 352
                         G+LD+A A+  +M+ S G+ P+V T N+LI G+ KK LV  A  + 
Sbjct: 347 SVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVL 406

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+  +G  P+V +Y  L+D +CK G++++A+ + N M   G+ P+   +NCLI+   +E
Sbjct: 407 RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKE 466

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +     I  E+   G +  + T+N L+  LC+  + K A+ LL +M     E    N 
Sbjct: 467 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI---SEGVVANT 523

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           VTYN LI  F ++G++++A  L+NE++ +G + ++ TY
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITY 561



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 189/412 (45%), Gaps = 48/412 (11%)

Query: 137 EAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           E F   G   G + S      L+  L   G+F+ ++ +  +MK   I      F  ++  
Sbjct: 90  ELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRD 149

Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDM 250
             KAG   + + +M +M+++    P   +YN    IL+ G C K        A  VF DM
Sbjct: 150 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK-------VAANVFYDM 202

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +   I P   TF  ++   C    + +A+ V  +M  HG     V Y +LI+ L    ++
Sbjct: 203 LSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 262

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY--- 367
           +EA+ L +EM   G  P+  T N +I G CK   + +A  + + +  +G +P  ITY   
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 368 ----------------------------NTLIDAYCKEGRMEDAFAMRNSML-DRGVLPD 398
                                       NTLI  +   GR++DA A+ + M+   G++PD
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V TYN LI G  ++G V     ++ ++ N G +  + +Y ILV   CK GK  +A +LL+
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E   M  +   PN V +N LI  FC++ ++ +A  +  E+  KG  P+  T+
Sbjct: 443 E---MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 491



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 3/202 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ ++ ++ N L+ A ++ G+ ++   +  EM  +   L+  ++N ++ GLC+AG+++KA
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKA 577

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M   G+ P  ++ NILI+G C+ G + +  +     K+MV  G  P+ VTFN+L
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ---KEMVLRGSTPDIVTFNSL 634

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C+   I   + +F ++ + GI    VTYN+L++ LC  G + +A  L DE +  G 
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGF 694

Query: 326 KPNVVTSNALINGFCKKKLVEK 347
            PN  T + L+     ++ +++
Sbjct: 695 VPNDRTWSILLQSLVPQETLDR 716



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 5/262 (1%)

Query: 274 NISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           ++S +M++F   GS  G       Y  LI  L  +G+      L  +M   G+       
Sbjct: 84  DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLF 143

Query: 333 NALINGFCKKKLV-EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            +++  + K     +  R++ +  +     P+  +YN +++        + A  +   ML
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R + P + T+  ++  L     V+   +++ ++  +G     V Y  L+ +L K  +  
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 263

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ LL+EMF M      P+  T+N +I G C+  ++ +A  ++N +L +G  P+  TY 
Sbjct: 264 EALQLLEEMFLM---GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYG 320

Query: 512 IVREEMMEKGFIPDIEGHMYNI 533
            +   + + G +   +   Y I
Sbjct: 321 YLMNGLCKIGRVDAAKDLFYRI 342



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/164 (19%), Positives = 74/164 (45%), Gaps = 2/164 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +    + G+     ++F  +    D L  +SI  ++L+    ++       E  K   
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKM--LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV 620

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G    +++ N L+  L + G+ ED   ++++++   I  +  ++N +++ LCK G + 
Sbjct: 621 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVY 680

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            A  ++++    G  P   T++IL+     +  + +    +AVF
Sbjct: 681 DACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFYNAVF 724


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 222/430 (51%), Gaps = 57/430 (13%)

Query: 128 KNMKPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++ +P L  + F  AG+  G K  V S N LL  LVK G       VYK++       NL
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-----------------------------------ED 211
            +F  ++ G CKAG+  +A + +                                   E+
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTFNTLID-G 268
           M+S  V+P + TYN +I G CK G    + KA  + ++M+  G    P+ VT+NTLI+ G
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSG---NLEKARELLEEMIRRGGKSAPDIVTYNTLINAG 179

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CKD ++  A+++ + M   G A  V+TYNS+I+ LCV G++ EA  +   M  S   P+
Sbjct: 180 ICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PD 236

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N L++GFCK  ++ +A  + +++  + + P VITY  L++  C+ G+++ AF +  
Sbjct: 237 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 296

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVE---------GVRNIMNELVNNGMRAGLVTYNI 439
            ++ +G +PDV  Y  L+ GL + G +E           R I+ E+V+  M   L TYNI
Sbjct: 297 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNI 356

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++G L KDG   KAVSL+ ++         P++VTYN LI G C+  ++ +A  L +E+ 
Sbjct: 357 VLGGLIKDGSISKAVSLISDLVA---RGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413

Query: 500 EKGLIPNQTT 509
             G  PN  T
Sbjct: 414 SLGCFPNDVT 423



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 259/545 (47%), Gaps = 88/545 (16%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P L +++F W+ ++    H +       HS             L + VK+G       ++
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDV-------HSY---------NHLLDILVKSGHQFRTGKVY 50

Query: 103 HAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
             L  S CS +L    +   +L+    K  +     E  +   ++ +   V   N L+  
Sbjct: 51  KDLLHSGCSPNL----VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHG 106

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VS 218
           L K+G  +    +++ M+  R+  ++ ++N V++GLCK+G L KA +++E+M   G   +
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSA 166

Query: 219 PKVVTYNILID-GYCKKGGI--------------------------------GKMYKADA 245
           P +VTYN LI+ G CK G +                                G++ +A  
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + K M      P+ VTFNTL+DGFCK   +  A++V EEM    I   V+TY  L+NGLC
Sbjct: 227 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ------- 358
             G++  A  L +E++  G  P+V+   +L++G CK   +E+A  L  ++S +       
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343

Query: 359 --GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
              + P + TYN ++    K+G +  A ++ + ++ RG +PDV TYN LI GL +   V 
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++ +E+ + G     VT   +V  LC+ G+   A SL+ E   M +++  PN+V Y 
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE---MSRKRHAPNVVVYT 460

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEK 520
            LI G C+  +++DA  +L+ +  +G+  +   Y+                 + +EM+ +
Sbjct: 461 SLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVAR 520

Query: 521 GFIPD 525
           GF+PD
Sbjct: 521 GFLPD 525



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 170/323 (52%), Gaps = 31/323 (9%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G    V +YN L+D   K G     ++   V+KD++ +G  PN VTF  LI G CK    
Sbjct: 22  GYKHDVHSYNHLLDILVKSG---HQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
           + A++    +    +A  V  +N LI+GL  DG  D+AV L + M +S + P++ T N +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 336 INGFCKKKLVEKARVLFDDISEQG--LSPSVITYNTLIDA-YCKEGRMEDAFAMRNSMLD 392
           I+G CK   +EKAR L +++  +G   +P ++TYNTLI+A  CK+G +E+A  + + M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  PDV TYN +I  L   G V     I+  +        LVT+N L+   CK G   +
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A+ +L+EM +   E   P+++TY +L+ G C+ G+++ A  LL                 
Sbjct: 256 ALEVLEEMCR---ENILPDVITYTILVNGLCRVGQVQVAFYLL----------------- 295

Query: 513 VREEMMEKGFIPDIEGHMYNISG 535
             EE++ +G+IPD+  +   + G
Sbjct: 296 --EEIVRQGYIPDVIAYTSLVDG 316



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 20/349 (5%)

Query: 69  LLHSLVVAKKYPKI---RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           +L  + +A   P +    S +H     G+    + I   +S CS  L   + ++D    A
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS-CSPDLVTFNTLLDGFCKA 250

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
               M P    E  +      +   V++   L+  L + G+ +   Y+ +E+ R+    +
Sbjct: 251 ---GMLPR-ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 306

Query: 186 LDSFNFVLNGLCKAGKLNKAS---------DIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           + ++  +++GLCK+G++ +A          +I+ +M S+ + P + TYNI++ G  K G 
Sbjct: 307 VIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 366

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I K   A ++  D+V  G +P+ VT+NTLIDG CK   +  A  + +EM S G     VT
Sbjct: 367 ISK---AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVT 423

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
             S++ GLC  G++D+A +L  EM      PNVV   +LI+G CK   ++ A V+ D + 
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMR 483

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            QG++     Y  LI +    GR+ +A AM + M+ RG LPD ST   L
Sbjct: 484 GQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 245/482 (50%), Gaps = 49/482 (10%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           SL+   +LLH L  A+++   R+ L     + +      +F  L+        +++  D+
Sbjct: 99  SLVSHAQLLHILARARRFHDARALLSSLPPHAE-----PLFPHLAEVYRDFTFSAVSFDL 153

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK--------------- 166
           L+ A+    +       F   G  G + S+ SCN+LL  LV+ G                
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 167 ---------------------FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
                                 + VE+V +EM+   +E+NL +++ V++  C  G    A
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFV-EEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNT 264
             I+E ++  G+SP VVTY +L+ GYCK    G+M +A+ V K+M E G I+ +EV +  
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKD---GRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I+G+C+   +  A +V  EM   GI   +  YN++INGLC  G+++E   +  EM   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+  + N LI+G+C++  + KA  +   +   GL+ + +TYNTL+  +C    ++DA 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ML RGV P+  + + L+ GL + G  E   N+  E +  G+   ++T+N ++  L
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G+  +A  LLD   +M++ +  P+ +TY  L  G+C+ G+L  A  L+N++   G  
Sbjct: 510 CKIGRMAEAEELLD---RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 505 PN 506
           P+
Sbjct: 567 PS 568



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 222/435 (51%), Gaps = 52/435 (11%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F   KR    G+  + +SC+ LL  L K GK E    ++KE   R +  N+ +FN V+
Sbjct: 451 LWFLMLKR----GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLCK G++ +A ++++ MK L   P  +TY  L DGYCK G +G    A  +   M   
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT---ATHLMNKMEHL 563

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  P+   FN+ I G    +       +  EM + G++  +VTY +LI G C +G L EA
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF--------------------- 352
             L  EM+ +G+ PNV   +AL++ F K+  V++A ++                      
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDK 683

Query: 353 -----DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
                D I++     + + +N +I   CK GR+ DA ++  S+ ++  LPD  TY+ LI 
Sbjct: 684 ISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIH 743

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G +  G+++   ++ + +++ G+   ++TYN L+  LCK GK  +AV+L +   K++ + 
Sbjct: 744 GCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN---KLQSKG 800

Query: 468 KWPNIVTYNVLIKGFCQKGK----------------LEDANGLLNELLEKGLIPNQTTYQ 511
             PN +TYN LI  +C++GK                +E+A  LL++++E  + PN  TY 
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYC 860

Query: 512 IVREEMMEKGFIPDI 526
            +    ++ G + +I
Sbjct: 861 TLIHGYIKSGNMEEI 875



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 218/490 (44%), Gaps = 125/490 (25%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    + G+ +D   V  EM+   I +NL  +N ++NGLCK G++ +   ++++M+ +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYK--------------------------------AD 244
           + P   +YN LIDGYC++G + K ++                                A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++  M++ G+ PNE++ +TL+DG  K      A+ +++E  + G+A  V+T+N++INGL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK----------------------- 341
           C  G++ EA  L D M      P+ +T   L +G+CK                       
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 342 ------------KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                        K   K   +  ++S +GLSP+++TY  LI  +CKEG + +A  +   
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL--------------- 434
           M++ G+ P+V   + L++   +EG V+    ++ +LVN  M  G                
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 435 -----------VTYNILVGALCKDGKSKKAVSL--------------------------- 456
                      V +N+++  LCK G+   A SL                           
Sbjct: 690 TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749

Query: 457 -LDEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            +DE F     M      PNI+TYN LI G C+ GKL  A  L N+L  KG+ PN  TY 
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 512 IVREEMMEKG 521
            + +E  ++G
Sbjct: 810 TLIDEYCKEG 819



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 183/425 (43%), Gaps = 109/425 (25%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I    L+    K  K       +K     GL  +V++ N ++  L K G+  + E + 
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKL-------------------------------- 202
             MK  R   +  ++  + +G CK G+L                                
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIA 582

Query: 203 ---NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------- 237
              +K +DI  +M + G+SP +VTY  LI G+CK+G +                      
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642

Query: 238 ----------GKMYKADAVFKDMVENGILPN--------------------------EVT 261
                     GK+ +A+ V + +V   ++P                            V 
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N +I G CK   I+ A  +FE + +        TY+SLI+G    G +DEA +LRD M+
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           ++GL PN++T N+LI G CK   + +A  LF+ +  +G+SP+ ITYNTLID YCKEG+  
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822

Query: 382 DAFAMRNSMLDRGVL----------------PDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +AF ++  M++ G +                P+  TY  LI G  + GN+E +  + +E+
Sbjct: 823 EAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882

Query: 426 VNNGM 430
              G+
Sbjct: 883 HIRGL 887



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 9/269 (3%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           V+F+ L+        +S+A+ VF+ MG  G    + + N L+N L   G    A  +  +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +G+ P+  T   +   +C+   V +A    +++   GL  +++ Y+ ++D YC  G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYN 438
            EDA  +  S+  +G+ P+V TY  L+ G  ++G +E    ++ E+   G +    V Y 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++   C+ G+   A  + +E   M       N+  YN +I G C+ G++E+   +L E+
Sbjct: 329 MMINGYCQRGRMDDATRVRNE---MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 499 LEKGLIPNQTTYQIV-----REEMMEKGF 522
            + G+ P++ +Y  +     RE  M K F
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAF 414



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 45/294 (15%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    L+  + K    H     +    + G+  +V  C+ L+    KEGK ++  
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 172 YVYKEMKR---------RRIELNLDS-----------------FNFVLNGLCKAGKLNKA 205
            V +++             IE++  S                 +N ++ GLCK+G++  A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E +++    P   TY+ LI G    G I + +    V   M+  G+ PN +T+N+L
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV---MLSAGLTPNIITYNSL 776

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK---------------- 309
           I G CK   +S A+ +F ++ S GI+   +TYN+LI+  C +GK                
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           ++EA+ L D+M+ + + PN +T   LI+G+ K   +E+   L+D++  +GL P+
Sbjct: 837 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 99/199 (49%), Gaps = 4/199 (2%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + V+ + L+        +  A  +FD + + G  PS+ + N L++   + G    A  + 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M   GVLPD  T   +     R+G V      + E+   G+   LV Y+ ++   C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPN 506
           G ++ A  +L+    ++++   PN+VTY +L+KG+C+ G++E+A  ++ E+ E G ++ +
Sbjct: 267 GWTEDARRILE---SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323

Query: 507 QTTYQIVREEMMEKGFIPD 525
           +  Y ++     ++G + D
Sbjct: 324 EVAYGMMINGYCQRGRMDD 342


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 242/480 (50%), Gaps = 10/480 (2%)

Query: 32  VILQLFNSDADPVLILRYFCWSTKEL-RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           V+L L   D  P L    F W    +    HSL  +  +L+ L   K +    +FL   +
Sbjct: 52  VLLHLSLYDQSPCLSWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLEN-I 110

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
               F S  ++  +L    D    NS ++  L++ Y  +   H   + F+     G +  
Sbjct: 111 AFKDFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPH 170

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           + +C  LL +L K+   + V  +YK+M +  +  N+  +N +L+  CK+G + KA  ++ 
Sbjct: 171 LHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLS 230

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M+   V P + TYN LI  YCKK   G  Y+A +V   M   GI P+  T+N+LI GFC
Sbjct: 231 EMELKCVFPDLFTYNTLISLYCKK---GMHYEALSVQDRMEMAGISPDIFTYNSLIYGFC 287

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +  A+++F ++    +    VTY SLI+G C    LDEA+ L++ M   GL P V+
Sbjct: 288 REGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVI 345

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+++   C+   +  A +L +++SE+ + P  +T NTLI+AYCK G M  A  +++ M
Sbjct: 346 TYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKM 405

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +  G+  D  TY  LI G  +   ++  + ++  +++ G      TY+ LV + CK    
Sbjct: 406 VGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNE 465

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +  + L DE+    +     ++  Y  LI+ FC+  K++ A  +L  + +KG+  +   Y
Sbjct: 466 EAVIKLPDELV---RRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVY 522



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 148/277 (53%), Gaps = 6/277 (2%)

Query: 236 GIGKM-YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  KM ++A  VF+ M  NG  P+      L++   KD       K++++M   G+ A +
Sbjct: 147 GNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANI 206

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             YN L++  C  G +++A  +  EM    + P++ T N LI+ +CKK +  +A  + D 
Sbjct: 207 HVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 266

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G+SP + TYN+LI  +C+EGRM +A  +   + D  V P+  TY  LI G  R  +
Sbjct: 267 MEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVND 324

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +   +   G+   ++TYN ++  LC+ G+ + A  LL+EM + + E   P+ VT
Sbjct: 325 LDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIE---PDNVT 381

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            N LI  +C+ G +  A  + ++++  GL  +Q TY+
Sbjct: 382 CNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYK 418



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 275 ISAAMKVFEE--MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +S+ +K+ ++  + SH ++  V+ Y +            EA+ + + M  +G +P++   
Sbjct: 122 LSSLVKIHDDPDVNSHVLSWLVIVYGN-------SKMTHEAIQVFEHMRVNGFRPHLHAC 174

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             L+N   K +L +    ++  + + G+  ++  YN L+ A CK G +E A  + + M  
Sbjct: 175 TVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMEL 234

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           + V PD+ TYN LI+   ++G      ++ + +   G+   + TYN L+   C++G+ ++
Sbjct: 235 KCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMRE 294

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           AV L  ++  +      PN VTY  LI G+C+   L++A  L   + EKGL P   TY  
Sbjct: 295 AVQLFRDIKDVT-----PNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNS 349

Query: 513 VREEMMEKGFIPD 525
           +  ++ E G + D
Sbjct: 350 ILRKLCEGGRLRD 362



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 9/253 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +L  LC+ G+L  A+ ++ +M    + P  VT N LI+ YCK   IG M  A  V 
Sbjct: 346 TYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCK---IGDMRSALKVK 402

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV  G+  ++ T+  LI GFCK + I  A ++   M   G +    TY+ L++  C  
Sbjct: 403 DKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQ 462

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
              +  + L DE++  GL  +V    ALI  FCK + ++ A+ +   + ++G+    + Y
Sbjct: 463 QNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVY 522

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +L   Y K G++     + + M  + ++  +  Y    A  + +       +I++   N
Sbjct: 523 TSLAYGYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDN------SILSLFWN 576

Query: 428 NGMRAGLVTYNIL 440
           + +   L++ NIL
Sbjct: 577 HVLERRLMSKNIL 589


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 207/366 (56%), Gaps = 12/366 (3%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S N+LL  L K   +  +  +Y EM+   +  +L + + + N LC   ++++A   M  +
Sbjct: 93  SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGI 152

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
              G  P VVTY  LI G C +  I    +A  +F  M + G  PN VT+ TLI G C+ 
Sbjct: 153 LRRGYIPNVVTYTTLIKGLCMEHRIS---EATRLFLRMQKLGCTPNAVTYGTLIKGLCQT 209

Query: 273 ENISAAMKVFEEM----GSHGI--AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            N++ A+K+ +EM      +G+    GV+TY+ +I+GLC  G+ DEA  L +EM A G+ 
Sbjct: 210 GNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMI 269

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+V++ + LI+GFC     ++++ LFD++ +QG+ P ++T++ LID  CKEG++ +A  +
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+ RG++P++ TYN LI G    G++   R +   + + G+    ++Y  L+   CK
Sbjct: 330 LEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCK 389

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             K K+A++L +EM ++ K    PN+ TY  L+KG  QKGK+ DA  L   +   G+  N
Sbjct: 390 TWKVKEAMNLYNEMLQVGKS---PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSAN 446

Query: 507 QTTYQI 512
              Y I
Sbjct: 447 SQIYGI 452



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 218/379 (57%), Gaps = 8/379 (2%)

Query: 137 EAFKRAGDYGL--KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           E    A  YG+  K  V++ + ++  L K G+ ++ + +++EMK + +  ++ S++ +++
Sbjct: 221 EMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIH 280

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C AGK +++  + ++M   GV P +VT+++LID  CK+G   K+ +A  + + M++ G
Sbjct: 281 GFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG---KVTEAKKLLEVMIQRG 337

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+PN +T+N+LIDGFC   ++++A ++F  M S G+    ++Y +LING C   K+ EA+
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM+  G  PNV T   L+ G  +K  V  A+ LF  +   G+S +   Y   +D  
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGL 457

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   + +A  + N +       ++  Y+CLI GL + G +E    +  +L   G++  +
Sbjct: 458 CKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDV 517

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYNI++   CK G+   A  L +   KME+    P+I+ YN L+ GFC+  KLE+   L
Sbjct: 518 VTYNIMIHGFCKVGQVDNANILFE---KMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 495 LNELLEKGLIPNQTTYQIV 513
           L+++++K + PN  +  IV
Sbjct: 575 LHKMVQKDVSPNAASCTIV 593



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 220/407 (54%), Gaps = 36/407 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++   L++ L  E +  +   ++  M++     N  ++  ++ GLC+ G +N A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215

Query: 206 ----SDIMEDMKSLGVS--PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
                +++ D    GV+  P V+TY+I+IDG CK   +G+  +A  +F++M   G++P+ 
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCK---VGREDEAKELFEEMKAQGMIPDV 272

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           ++++TLI GFC       +  +F+EM   G+   +VT++ LI+ LC +GK+ EA  L + 
Sbjct: 273 ISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEV 332

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G+ PN++T N+LI+GFC    +  AR LF  +  +GL P  I+Y TLI+ YCK  +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  + N ML  G  P+V+TY  L+ GL ++G V   + +   +   G+ A    Y I
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452

Query: 440 LVGALCKDGKSKKAVSLLDEM----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            +  LCK+    +A+ L +E+    FK+       NI  Y+ LI G C+ GKLE A  L 
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKL-------NIENYSCLIDGLCKAGKLETAWELF 505

Query: 496 NELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
            +L ++GL P+  TY                 I+ E+M E G  PDI
Sbjct: 506 EKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 212/378 (56%), Gaps = 12/378 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD------SFNFV 192
           F R    G   + ++   L++ L + G       ++KEM     +  ++      +++ +
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCK G+ ++A ++ E+MK+ G+ P V++Y+ LI G+C     GK  ++  +F +MV+
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC---CAGKWDQSKHLFDEMVD 300

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+ VTF+ LID  CK+  ++ A K+ E M   GI   ++TYNSLI+G C+ G L+ 
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M + GL+P+ ++   LING+CK   V++A  L++++ + G SP+V TY TL+ 
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              ++G++ DA  +   M   GV  +   Y   + GL +   +     + NEL +   + 
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +  Y+ L+  LCK GK + A  L +   K+ +E   P++VTYN++I GFC+ G++++AN
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFE---KLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537

Query: 493 GLLNELLEKGLIPNQTTY 510
            L  ++ E G  P+   Y
Sbjct: 538 ILFEKMEENGCTPDIIAY 555



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 195/380 (51%), Gaps = 10/380 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +   SIIID L     K  +     E F+     G+   V+S + L+      GK+
Sbjct: 233 CKPGVITYSIIIDGL----CKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW 288

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +  ++++ EM  + ++ ++ +F+ +++ LCK GK+ +A  ++E M   G+ P ++TYN L
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSL 348

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           IDG+C    +G +  A  +F  M   G+ P+E+++ TLI+G+CK   +  AM ++ EM  
Sbjct: 349 IDGFCM---VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ 405

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G +  V TY +L+ GL   GK+ +A  L   M   G+  N       ++G CK   + +
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE 465

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF+++       ++  Y+ LID  CK G++E A+ +   +   G+ PDV TYN +I 
Sbjct: 466 AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH 525

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  + G V+    +  ++  NG    ++ YN L+   C+  K ++ + LL    KM ++ 
Sbjct: 526 GFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH---KMVQKD 582

Query: 468 KWPNIVTYNVLIKGFCQKGK 487
             PN  +  +++   C+  K
Sbjct: 583 VSPNAASCTIVVDMLCKDEK 602



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 45/320 (14%)

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G I  + +A   F  M+ +  +P   +FN L+ G  K  + S    ++ EM   G++
Sbjct: 65  CKTGNITAI-QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS 123

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + T + L N LC   ++ EA+A    ++  G  PNVVT   LI G C +  + +A  L
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183

Query: 352 FDDISEQGLSPSVITYNTL----------------------------------------- 370
           F  + + G +P+ +TY TL                                         
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID  CK GR ++A  +   M  +G++PDV +Y+ LI G    G  +  +++ +E+V+ G+
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +  +VT+++L+  LCK+GK  +A  LL+ M    +    PN++TYN LI GFC  G L  
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI---QRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 491 ANGLLNELLEKGLIPNQTTY 510
           A  L   +  KGL P++ +Y
Sbjct: 361 ARELFLSMPSKGLEPDEISY 380



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 5/264 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  F   G   S   +F  LS  S  L  + I    L+  Y K  K       +    
Sbjct: 347 SLIDGFCMVGDLNSARELF--LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G   +V +   LL+ L ++GK  D + ++  MK   +  N   +   L+GLCK   L 
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLF 464

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A ++  ++KS      +  Y+ LIDG CK    GK+  A  +F+ + + G+ P+ VT+N
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKA---GKLETAWELFEKLSQEGLQPDVVTYN 521

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I GFCK   +  A  +FE+M  +G    ++ YN+L+ G C   KL+E + L  +M+  
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581

Query: 324 GLKPNVVTSNALINGFCKKKLVEK 347
            + PN  +   +++  CK +  +K
Sbjct: 582 DVSPNAASCTIVVDMLCKDEKYKK 605



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 22/227 (9%)

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A    D MM S   P + + N L+ G  K     +   L++++   GLSP + T + L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  C   R+ +A A    +L RG +P+V TY  LI GL  E  +     +   +   G  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKL 488
              VTY  L+  LC+ G    A+ L  EM     +      P ++TY+++I G C+ G+ 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           ++A  L                    EEM  +G IPD+  +   I G
Sbjct: 254 DEAKELF-------------------EEMKAQGMIPDVISYSTLIHG 281


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 215/395 (54%), Gaps = 24/395 (6%)

Query: 148  KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
            K  V +   ++ AL K+G   +   ++ EM    I  ++  ++ +++GLC+ G+L +A +
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141

Query: 208  IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLI 266
              ++M+  G+S  V TYN LI G  + G    ++K    F + MV+ G  P+  TF  LI
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAG----LWKEVTWFLNLMVDRGFSPDAFTFTILI 1197

Query: 267  DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            DG CK+  +  A ++ E M   G    ++TYN+L+NGLC+ G+L++A  L + +   G+K
Sbjct: 1198 DGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 1257

Query: 327  PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
             NV + N LING+CK + +++A   F+++  +GL PS +TYNTLI A C+ GR+  A  +
Sbjct: 1258 LNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 1317

Query: 387  RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
               M   G    +STY  L+ GL + G++E   ++   +     +  +  ++IL+  +C+
Sbjct: 1318 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCR 1377

Query: 447  DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             GK ++A    DE+ K   E   P+ + YN+LI G C KG L +A  LL ++ EKG +P+
Sbjct: 1378 AGKLEEAWKQFDEISKNGLE---PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 1434

Query: 507  QTTYQIV----------------REEMMEKGFIPD 525
              T+ ++                 EEM  + F PD
Sbjct: 1435 SITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 210/404 (51%), Gaps = 20/404 (4%)

Query: 110  DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            D+LC++ +  + L              + F      G+   V+  + L+  L + G+ ++
Sbjct: 1093 DALCKDGMTTEAL--------------DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 1138

Query: 170  VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                +KEM+ R I  ++ ++N +++GL +AG   + +  +  M   G SP   T+ ILID
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198

Query: 230  GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            G CK+G +G+   A  + + M   G  P+ +T+NTL++G C    +  A K+FE +   G
Sbjct: 1199 GLCKEGKVGE---AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 290  IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            I   V +YN LING C D K+DEA    +EM   GLKP+ VT N LI   C+   V  A+
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 350  VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             LF ++   G    + TY  L+D  CK G +E+A  +  S+      P++  ++ L+ G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 410  SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
             R G +E      +E+  NG+    + YNIL+  LC  G   +AV LL   ++ME++   
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL---WQMEEKGCL 1432

Query: 470  PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            P+ +T+NV+I+   ++ ++ +A  LL E+  +   P++    ++
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 211/412 (51%), Gaps = 36/412 (8%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            G +   ++   L++ +  E    D   ++ EM ++ +  +  ++  ++NGLCKA K   A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              + E MK       V TY ++ID  CK G      +A  +F +M+  GILP+ V +++L
Sbjct: 1071 IKLHEKMKG-NCKGDVFTYGMIIDALCKDG---MTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +DG C+   +  A++ F+EM   GI+A V TYNSLI+GL   G   E     + M+  G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             P+  T   LI+G CK+  V +A+ + + +  +G  P ++TYNTL++  C  G++EDA  
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +  S+ DRG+  +V +YN LI G  ++  ++       E+   G++   VTYN L+GALC
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 446  KDGKSKKAVSLLDEM-------------------------------FK-MEKEKKWPNIV 473
            + G+ + A  L  EM                               F+ ++K +  PNI 
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366

Query: 474  TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             +++L+ G C+ GKLE+A    +E+ + GL P+   Y I+   +  KG + +
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 1418



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 169/338 (50%), Gaps = 21/338 (6%)

Query: 69   LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
            L+H L  A  + ++  FL++ V  G F+  +  F  L    D LC+   + +   +  + 
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNLMVDRG-FSPDAFTFTILI---DGLCKEGKVGEAQQILELM 1216

Query: 129  NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
              K              G +  +L+ N L+  L   G+ ED   +++ +  R I+LN+ S
Sbjct: 1217 RHK--------------GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS 1262

Query: 189  FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            +N ++NG CK  K+++A    E+M+  G+ P  VTYN LI   C+ G   ++  A  +F 
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG---RVRTAQKLFV 1319

Query: 249  DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +M   G      T+  L+DG CK+ ++  AM +F+ +        +  ++ L++G+C  G
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379

Query: 309  KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            KL+EA    DE+  +GL+P+ +  N LING C K ++ +A  L   + E+G  P  IT+N
Sbjct: 1380 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 1439

Query: 369  TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
             +I    KE  + +A  +   M +R   PD +  + L+
Sbjct: 1440 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 4/236 (1%)

Query: 275  ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            ++ A+K+F+            T+N L+  +   G       +  ++   G++P++ T N 
Sbjct: 927  LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986

Query: 335  LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            LI+  C  + V     +F    ++G  P  +T  TL+     E  + DA  + + M  +G
Sbjct: 987  LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046

Query: 395  VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            +L D  TY  LI GL +     G+   ++E +    +  + TY +++ ALCKDG + +A+
Sbjct: 1047 LLGDAKTYGILINGLCKARKT-GLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEAL 1105

Query: 455  SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             +  EM         P++V Y+ L+ G C+ G+L++A     E+  +G+  +  TY
Sbjct: 1106 DMFSEMIGA---GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%)

Query: 289  GIAAGVVTYNSLINGLCVDG--KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
            G  A +  +   +   C  G  KL++A+ L D  + S   P   T N L+    K     
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 347  KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
                ++  I++ G+ P + T N LI   C    +   F +    L RG  PD  T   L+
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 407  AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             G+  E  +     + +E+   G+     TY IL+  LCK  K+  A+ L ++M    K 
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM----KG 1079

Query: 467  KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                ++ TY ++I   C+ G   +A  + +E++  G++P+   Y
Sbjct: 1080 NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 12/402 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  +    +G+  +  +C   + AL   G +ED   ++ +MK +  E N+ ++  +++
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC +G L  A  +   M   GV P  VTYN LI+   +   I   +    V   M  NG
Sbjct: 364 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF---VVLNLMGRNG 420

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+N +I G+C   +   AM V   M   G +A +VTYN++I G C  G    A+
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M   G KP+  +   LI GFCK   +E A  LF+++ + GL P+ +TY  LID Y
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+ +++ A ++   M   G  P+V TYN LI GL+++ N  G   +   ++  G+   +
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           VTY  ++  LCK+G +  A+    EMF KM ++   PN++TY+ LI+   Q+GK+E+A  
Sbjct: 601 VTYTAMIDGLCKNGSTSLAL----EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           L  EL   GLIP++ TY  + E  +  G +     H +N  G
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVE----HAFNFLG 694



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 189/366 (51%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+  + + + LL  L + G    V   Y  M    ++ NL  +N V+N LCK G +  A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             IM+ +    +SP   TY  +I G+C+K  +     A  VF  M + G  PN VT++TL
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD---SALQVFNQMAKEGCEPNTVTYSTL 291

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C    ++ A  +  EM  HGI     T    I  LC  G  ++A  L  +M   G 
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGC 351

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNV T  ALI+G C   L++ A  LF  +S  G+ P+ +TYN LI+   +  R++ AF 
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M   G  P++ TYN +I G    G+ +    +MN ++  G  A LVTYN ++   C
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 446 KDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             G +  A+ +LD M     K  +W    +Y  LI GFC+  K+E A GL NE+++ GL 
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEW----SYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 505 PNQTTY 510
           PN+ TY
Sbjct: 528 PNEVTY 533



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+  + ++ N L+  LV+  + +    V   M R     N+ ++N ++ G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G   KA  +M +M   G S  +VTYN +I GYC  G      +   +   M + G  P+
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR---ILDLMRDGGCKPD 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E ++  LI GFCK   + +A  +F EM   G+    VTY +LI+G C D KLD A +L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  SG +PNV T N LI+G  K+     A  L   + E+G+ P+V+TY  +ID  CK G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A  M N M+++G LP++ TY+ LI  L +EG VE   N+  EL  +G+    +TY 
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            ++ A    GK + A + L  M K   +   P + TY VLIKG   +  L D
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQ---PTLWTYGVLIKGLKNEYLLAD 723



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 6/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++L + +        + F +    G + + ++ + L+  L   G+  +   + +EM    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +    +  LC  G    A  +  DMK+ G  P V TY  LI G C  G    + 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG---LLK 372

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M  +G+ PN VT+N LI+   ++  I  A  V   MG +G +  +VTYN +I
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C+ G   +A+ + + M+  G   N+VT N +I G+C       A  + D + + G  
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   +Y  LI  +CK  +ME AF + N M+D G+ P+  TY  LI G  ++  ++   ++
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  +  +G R  + TYN+L+  L K      A  L   M +   E  +PN+VTY  +I G
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE---EGIFPNVVTYTAMIDG 609

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C+ G    A  + N+++E+G +PN  TY  +   + ++G + + E
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 35/418 (8%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            + + R    G++ ++L  N ++ AL K+G   D E + K++    +  +  ++  ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------- 242
            C+   L+ A  +   M   G  P  VTY+ LI+G C  G + + +              
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319

Query: 243 -------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
                              A  +F DM   G  PN  T+  LI G C    +  A+ +F 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M   G+    VTYN+LIN L  + ++  A  + + M  +G  PN+VT N +I G+C   
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             +KA ++ +++ ++G S +++TYNT+I  YC  G    A  + + M D G  PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  +   +E    + NE+V++G+    VTY  L+   CKD K   A SLL+    M
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH---M 556

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++    PN+ TYNVLI G  ++     A  L   ++E+G+ PN  TY  + + + + G
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 183/424 (43%), Gaps = 32/424 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K  K    F  F    D GL  + ++   L+    K+ K +    + + MKR  
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++N +++GL K    + A ++ + M   G+ P VVTY  +IDG CK G      
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL-- 618

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M+E G LPN +T+++LI    ++  +  A  +F E+  HG+    +TY  +I
Sbjct: 619 -ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
               + GK++ A      M+ +G +P + T   LI G   + L+   R            
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 350 ------------VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
                       V+   ++E     SV   N L+      GR  +A  +  SM+ +G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D   YN L+  L R  NV+    +   +   G    L  Y  L+ ALC+  + K+A    
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 458 DEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           + M      + W P+ V   VLI G  + G  +     L+ +  +  +P+   Y I+  E
Sbjct: 858 ENMLM----RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILARE 913

Query: 517 MMEK 520
             +K
Sbjct: 914 ASKK 917



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI      E ++  M   + +   G+  G+  Y++L+  L   G     +     M++ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++PN++  NA+IN  CK   V  A  +   + E  +SP   TY ++I  +C++  ++ A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M   G  P+  TY+ LI GL   G V    +++ E++ +G+     T    + AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G  + A  L  +M     E   PN+ TY  LI G C  G L+ A GL + +   G+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCE---PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387

Query: 505 PNQTTY 510
           PN  TY
Sbjct: 388 PNTVTY 393


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 204/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    + K+M++ +IE ++  +N +++GLCK   ++ A
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDA 274

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M++ G+ P V TYN LI   C     G+   A  +  +M+E  I PN VTF+ L
Sbjct: 275 FALFNKMETKGIRPDVFTYNSLISCLC---NYGRWSDASRLLSNMIERKINPNVVTFSAL 331

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N LI GFCK K VE+   LF ++S++GL  + +TYNTLI    + G  + A  
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV PD+ TY+ L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   PN++ Y  +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 512 KAGKVEDGWDLF---CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568

Query: 506 NQTTYQIVREEMMEKG 521
           +   Y  +    +  G
Sbjct: 569 DSGCYNTLIRARLRDG 584



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 209/388 (53%), Gaps = 35/388 (9%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K +D   ++ EM + R   ++  FN +L+ + K  K +    + E M++L +S  + +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI+ +C++    ++  A AV   M++ G  P+ VT ++L++G+C  + IS A+ + ++M
Sbjct: 120 ILINCFCRRS---QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G     VT+N+LI+GL +  K  EAVAL D+M+  G +P++VT  A++NG CK+  +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           + A  L   + +  +   V+ YNT+ID  CK   ++DAFA+ N M  +G+ PDV TYN L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--- 462
           I+ L   G       +++ ++   +   +VT++ L+ A  K+GK  +A  L DEM K   
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 463 -----------------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
                                        M  +  +PN+VTYN LIKGFC+  ++E+   
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
           L  E+ ++GL+ N  TY  + + + + G
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAG 444



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 245/498 (49%), Gaps = 21/498 (4%)

Query: 41  ADPVLILR--YFCWSTKELRA--SHSLLLTGRL------LHSLVVAKKYPKIRSF---LH 87
           A P+  LR  YF  ++ + R   S + LL  +L         +V ++  P I  F   L 
Sbjct: 29  ASPLFSLRGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLS 88

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
              K  KF  V ++   +     S    S   ++L+  + +  +  L      +    G 
Sbjct: 89  AIAKMKKFDLVISLGERMQNLRISYDLYSY--NILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  +++ + LL       +  D   +  +M     + +  +FN +++GL    K ++A  
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ M   G  P +VTY  +++G CK+G I     A ++ K M +  I  + V +NT+ID
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL---ALSLLKKMEKGKIEADVVIYNTIID 263

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK ++I  A  +F +M + GI   V TYNSLI+ LC  G+  +A  L   M+   + P
Sbjct: 264 GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT +ALI+ F K+  + +A  L+D++ ++ + P + TY++LI+ +C   R+++A  M 
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ +   P+V TYN LI G  +   VE    +  E+   G+    VTYN L+  L + 
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G    A  +     KM  +   P+I+TY++L+ G C+ GKLE A  +   L +  + P+ 
Sbjct: 444 GDCDMAQKIFK---KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 508 TTYQIVREEMMEKGFIPD 525
            TY I+ E M + G + D
Sbjct: 501 YTYNIMIEGMCKAGKVED 518



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 177/326 (54%), Gaps = 3/326 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F +    G++  V + N L+  L   G++ D   +   M  R+I  N+ +F+ +++
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALID 333

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              K GKL +A  + ++M    + P + TY+ LI+G+C      ++ +A  +F+ M+   
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKD 390

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+NTLI GFCK + +   M++F EM   G+    VTYN+LI GL   G  D A 
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  +M++ G+ P+++T + L++G CK   +EKA V+F+ + +  + P + TYN +I+  
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G++ED + +  S+  +GV P+V  Y  +I+G  R+G  E    +  E+  +G     
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEM 460
             YN L+ A  +DG    +  L+ EM
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 181/307 (58%), Gaps = 4/307 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++ +   +F++M + G++ N VT+NTLI
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A K+F++M S G+   ++TY+ L++GLC  GKL++A+ + + +  S ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++ T N +I G CK   VE    LF  +S +G+ P+VI Y T+I  +C++G  E+A A+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LPD   YN LI    R+G+      ++ E+ + G      T ++++  L  
Sbjct: 558 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616

Query: 447 DGKSKKA 453
           DG+ +K+
Sbjct: 617 DGRLEKS 623



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 158/289 (54%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F +MV++  LP+ V FN L+    K +     + + E M +  I+  + +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LIN  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K +  A  L D + E 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P  +T+NTLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++  
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++ ++    + A +V YN ++  LCK      A +L +   KME +   P++ TYN L
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFN---KMETKGIRPDVFTYNSL 296

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I   C  G+  DA+ LL+ ++E+ + PN  T+  + +  +++G + + E
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 223/410 (54%), Gaps = 6/410 (1%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           ++D+L+  + K +        F +  + GL   V +CN++L+ L  +    +VE VY  M
Sbjct: 139 LLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVM 198

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
            + +I   + +FN +++  CK G++ +A ++++ M+  G  P  V+YN+L++G     G 
Sbjct: 199 IKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGL---SGK 255

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G+  +A  + + M   G+  +  T+N LI GFCK E    A  +  EM   G    VVTY
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+++  LC  G++ +A    D M+   L P++V+ N LI G+ +     +A +LF ++  
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           + L PSV+TYNTLID  C+ G ++ A  M++ M+  G+ PDV T+  L+ G  + GN+  
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            + + +E+++ G++   + Y   +    K G   KA  + +E   M+ E   P+++TYNV
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEE---MKAEGFPPDLITYNV 492

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           LI G C+ G  +DAN L+ ++  +G++P+  TY  +    +  G +   E
Sbjct: 493 LINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 207/383 (54%), Gaps = 11/383 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G   + +S N L+  L  +G+F+  + + ++M    ++++  ++N ++ G CK     +
Sbjct: 236 FGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEE 295

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+D+  +M   G  P VVTYN ++   C+   +G++  A      MV   ++P+ V++NT
Sbjct: 296 ANDLRREMLGRGALPTVVTYNTIMYSLCR---LGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G+ +  N + A+ +F E+ S  +   VVTYN+LI+G C  G LD A  ++D+M+  G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L P+VVT   L+ GFC+   +  A+ LFD++  +GL P  I Y T I    K G    AF
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            M+  M   G  PD+ TYN LI GL + GN +    ++ ++   G+    VTY  ++ A 
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              G  +KA  +  +M    K+   P++VTY VLI  +  +G+L+ A    +E+ +KG+ 
Sbjct: 533 LISGLLRKAEEVFSDML---KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589

Query: 505 PNQTTYQ-----IVREEMMEKGF 522
           PN  TY      + +E MM+  +
Sbjct: 590 PNVITYNALIYGLCKENMMDVAY 612



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 194/381 (50%), Gaps = 13/381 (3%)

Query: 137 EAFKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           E F+ A D        G   +V++ N ++ +L + G+  D       M    +  +L S+
Sbjct: 291 EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSY 350

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N ++ G  + G   +A  +  +++S  + P VVTYN LIDG C+ G +     A  +  D
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDI---AKGMKDD 407

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+++G+ P+ VTF  L+ GFC+  N+  A ++F+EM S G+    + Y + I G    G 
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             +A  +++EM A G  P+++T N LING CK    + A  L   +  +G+ P  +TY +
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +I A+   G +  A  + + ML +G+ P V TY  LI   +  G ++  +   +E+ + G
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   ++TYN L+  LCK+     A +L  E   ME +   PN  TY +LI         +
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAE---MESKGVSPNKYTYTILINENSNLQYWQ 644

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           DA  L  ++L++ + P+  T+
Sbjct: 645 DALKLYKDMLDREIKPDSCTH 665



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 194/372 (52%), Gaps = 22/372 (5%)

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R  E+++   + ++    K   L K   +   M + G+ P V   N ++     K  + +
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +   + V+  M++  I P  VTFNT++D  CK+  +  A++V + M   G     V+YN 
Sbjct: 191 V---EEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+NGL   G+ D A  L ++M   GLK +  T N LI GFCKK++ E+A  L  ++  +G
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG 307

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P+V+TYNT++ + C+ GR+ DA    + M++  ++PD+ +YN LI G SR GN     
Sbjct: 308 ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEAL 367

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + +EL +  +   +VTYN L+   C+ G    A  + D+M    K    P++VT+ +L+
Sbjct: 368 LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI---KHGLCPDVVTFTILV 424

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFI 523
           +GFCQ G L  A  L +E+L +GL P+   Y                  ++EEM  +GF 
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 524 PDIEGHMYNISG 535
           PD+  +   I+G
Sbjct: 485 PDLITYNVLING 496



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 150/279 (53%), Gaps = 3/279 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL   V++   L+R   + G     + ++ EM  R ++ +  ++   + G  K G  +K
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  + E+MK+ G  P ++TYN+LI+G CK   +G    A+ + + M   GI+P+ VT+ +
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCK---LGNFDDANELVQKMRLEGIVPDHVTYTS 527

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I        +  A +VF +M   GI   VVTY  LI+   V G+LD A    DEM   G
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PNV+T NALI G CK+ +++ A  LF ++  +G+SP+  TY  LI+        +DA 
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDAL 647

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +   MLDR + PD  T++ L+  LS++  +  V  + N
Sbjct: 648 KLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 168/338 (49%), Gaps = 38/338 (11%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   ++S N L+    + G F +   ++ E++ + +  ++ ++N +++G C+ G L+ A 
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + +DM   G+ P VVT+ IL+ G+C+   +G +  A  +F +M+  G+ P+ + + T I
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQ---MGNLPMAKELFDEMLSRGLKPDCIAYTTRI 459

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD-------- 318
            G  K  N S A  + EEM + G    ++TYN LINGLC  G  D+A  L          
Sbjct: 460 VGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV 519

Query: 319 ---------------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
                                      +M+  G+ P+VVT   LI+ +  +  ++ A+  
Sbjct: 520 PDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKY 579

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD++ ++G+SP+VITYN LI   CKE  M+ A+ +   M  +GV P+  TY  LI   S 
Sbjct: 580 FDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSN 639

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
               +    +  ++++  ++    T++ L+  L KD K
Sbjct: 640 LQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 137/277 (49%), Gaps = 3/277 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC + +   +L+  + +     +  E F      GLK   ++    +   +K G      
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + +EMK      +L ++N ++NGLCK G  + A+++++ M+  G+ P  VTY  +I  +
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                 G + KA+ VF DM++ GI P+ VT+  LI  +     +  A K F+EM   G++
Sbjct: 533 LIS---GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TYN+LI GLC +  +D A  L  EM + G+ PN  T   LIN     +  + A  L
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           + D+ ++ + P   T++ L+    K+ ++     + N
Sbjct: 650 YKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 3/177 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++   ++ A +  G     E V+ +M ++ I  ++ ++  +++     G+L+ A
Sbjct: 517 GIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFA 576

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               ++M+  GVSP V+TYN LI G CK+  +   Y    +F +M   G+ PN+ T+  L
Sbjct: 577 KKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYN---LFAEMESKGVSPNKYTYTIL 633

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           I+     +    A+K++++M    I     T+++L+  L  D KL   + L +  +A
Sbjct: 634 INENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENLPLA 690


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 12/402 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  +    +G+  +  +C   + AL   G +ED   ++ +MK +  E N+ ++  +++
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC +G L  A  +   M   GV P  VTYN LI+   +   I   +    V   M  NG
Sbjct: 364 GLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF---VVLNLMGRNG 420

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+N +I G+C   +   AM V   M   G +A +VTYN++I G C  G    A+
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M   G KP+  +   LI GFCK   +E A  LF+++ + GL P+ +TY  LID Y
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+ +++ A ++   M   G  P+V TYN LI GL+++ N  G   +   ++  G+   +
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           VTY  ++  LCK+G +  A+    EMF KM ++   PN++TY+ LI+   Q+GK+E+A  
Sbjct: 601 VTYTAMIDGLCKNGSTSLAL----EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           L  EL   GLIP++ TY  + E  +  G +     H +N  G
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVE----HAFNFLG 694



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/366 (34%), Positives = 189/366 (51%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+  + + + LL  L + G    V   Y  M    ++ NL  +N V+N LCK G +  A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             IM+ +    +SP   TY  +I G+C+K  +     A  VF  M + G  PN VT++TL
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD---SALQVFNQMAKEGCEPNTVTYSTL 291

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C    ++ A  +  EM  HGI     T    I  LC  G  ++A  L  +M   G 
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGC 351

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNV T  ALI+G C   +++ A  LF  +S  G+ P+ +TYN LI+   +  R++ AF 
Sbjct: 352 EPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M   G  P++ TYN +I G    G+ +    +MN ++  G  A LVTYN ++   C
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 446 KDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             G +  A+ +LD M     K  +W    +Y  LI GFC+  K+E A GL NE+++ GL 
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEW----SYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 505 PNQTTY 510
           PN+ TY
Sbjct: 528 PNEVTY 533



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+  + ++ N L+  LV+  + +    V   M R     N+ ++N ++ G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G   KA  +M +M   G S  +VTYN +I GYC  G      +   +   M + G  P+
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR---ILDLMRDGGCKPD 494

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E ++  LI GFCK   + +A  +F EM   G+    VTY +LI+G C D KLD A +L +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  SG +PNV T N LI+G  K+     A  L   + E+G+ P+V+TY  +ID  CK G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A  M N M+++G LP++ TY+ LI  L +EG VE   N+  EL  +G+    +TY 
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            ++ A    GK + A + L  M K   +   P + TY VLIKG   +  L D
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQ---PTLWTYGVLIKGLKNEYLLAD 723



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 197/406 (48%), Gaps = 6/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++L + +        + F +    G + + ++ + L+  L   G+  +   + +EM    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +    +  LC  G    A  +  DMK+ G  P V TY  LI G C  G I K+ 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG-ILKV- 373

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M  +G+ PN VT+N LI+   ++  I  A  V   MG +G +  +VTYN +I
Sbjct: 374 -AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C+ G   +A+ + + M+  G   N+VT N +I G+C       A  + D + + G  
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   +Y  LI  +CK  +ME AF + N M+D G+ P+  TY  LI G  ++  ++   ++
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  +  +G R  + TYN+L+  L K      A  L   M +   E  +PN+VTY  +I G
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE---EGIFPNVVTYTAMIDG 609

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C+ G    A  + N+++E+G +PN  TY  +   + ++G + + E
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 35/418 (8%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            + + R    G++ ++L  N ++ AL K+G   D E + K++    +  +  ++  ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------- 242
            C+   L+ A  +   M   G  P  VTY+ LI+G C  G + + +              
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319

Query: 243 -------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
                              A  +F DM   G  PN  T+  LI G C    +  A+ +F 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFH 379

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M   G+    VTYN+LIN L  + ++  A  + + M  +G  PN+VT N +I G+C   
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             +KA ++ +++ ++G S +++TYNT+I  YC  G    A  + + M D G  PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  +   +E    + NE+V++G+    VTY  L+   CKD K   A SLL+    M
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH---M 556

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++    PN+ TYNVLI G  ++     A  L   ++E+G+ PN  TY  + + + + G
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 183/424 (43%), Gaps = 32/424 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K  K    F  F    D GL  + ++   L+    K+ K +    + + MKR  
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++N +++GL K    + A ++ + M   G+ P VVTY  +IDG CK G      
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL-- 618

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M+E G LPN +T+++LI    ++  +  A  +F E+  HG+    +TY  +I
Sbjct: 619 -ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
               + GK++ A      M+ +G +P + T   LI G   + L+   R            
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 350 ------------VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
                       V+   ++E     SV   N L+      GR  +A  +  SM+ +G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D   YN L+  L R  NV+    +   +   G    L  Y  L+ ALC+  + K+A    
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 458 DEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           + M      + W P+ V   VLI G  + G  +     L+ +  +  +P+   Y I+  E
Sbjct: 858 ENMLM----RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILARE 913

Query: 517 MMEK 520
             +K
Sbjct: 914 ASKK 917



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI      E ++  M   + +   G+  G+  Y++L+  L   G     +     M++ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++PN++  NA+IN  CK   V  A  +   + E  +SP   TY ++I  +C++  ++ A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M   G  P+  TY+ LI GL   G V    +++ E++ +G+     T    + AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G  + A  L  +M     E   PN+ TY  LI G C  G L+ A GL + +   G+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCE---PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVF 387

Query: 505 PNQTTY 510
           PN  TY
Sbjct: 388 PNTVTY 393


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 194/338 (57%), Gaps = 6/338 (1%)

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM+ +  + ++ ++N ++NG+CK G+L++A   + +M S G  P V+T+NI++   C   
Sbjct: 107 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC--- 163

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
             G+   A+ +  DM+  G  P+ VTFN LI+  C+   +  A+ + E+M  HG     +
Sbjct: 164 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 223

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +YN L++G C + K+D A+   D M++ G  P++VT N L+   CK   V+ A  + + +
Sbjct: 224 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 283

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           S +G SP +ITYNT+ID   K G+ E A  + + M  +G+ PD+ TY+ L++GLSREG V
Sbjct: 284 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 343

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +      ++L   G+R   +TYN ++  LCK  ++ +A+  L  M     ++  P   TY
Sbjct: 344 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMI---SKRCKPTEATY 400

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            +LI+G   +G  ++A  LLNEL  +GL+   +  Q+ 
Sbjct: 401 TILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVA 438



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 168/290 (57%), Gaps = 6/290 (2%)

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           ++  +   CK+ G+G+  K   +  +M   G  P+ VT+N LI+G CK+  +  A+K   
Sbjct: 85  FSFYVQTTCKESGVGQAMK---LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M S+G    V+T+N ++  +C  G+  +A  L  +M+  G  P+VVT N LIN  C++ 
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           L+ +A  + + +   G +P+ ++YN L+  +CKE +M+ A    + M+ RG  PD+ TYN
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+  L ++G V+    I+N+L + G    L+TYN ++  L K GK+++A+ LLDE   M
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE---M 318

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ++   P+I+TY+ L+ G  ++GK+++A    ++L   G+ PN  TY  +
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 368



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 178/315 (56%), Gaps = 3/315 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  V++ N L+  + KEG+ ++       M     + N+ + N +L  +C  G+   A
Sbjct: 112 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 171

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ DM   G SP VVT+NILI+  C++G +G   +A  + + M  +G  PN +++N L
Sbjct: 172 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG---RAIDILEKMPMHGCTPNSLSYNPL 228

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GFCK++ +  A++  + M S G    +VTYN+L+  LC DGK+D AV + +++ + G 
Sbjct: 229 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 288

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P ++T N +I+G  K    E+A  L D++  +GL P +ITY++L+    +EG++++A  
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 348

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + +   G+ P+  TYN ++ GL +    +   + +  +++   +    TY IL+  + 
Sbjct: 349 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 408

Query: 446 KDGKSKKAVSLLDEM 460
            +G +K+A+ LL+E+
Sbjct: 409 YEGLAKEALDLLNEL 423



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 169/286 (59%), Gaps = 3/286 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG + +V++ N +LR++   G++ D E +  +M R+    ++ +FN ++N LC+ G L +
Sbjct: 146 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 205

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A DI+E M   G +P  ++YN L+ G+CK+    KM +A      MV  G  P+ VT+NT
Sbjct: 206 AIDILEKMPMHGCTPNSLSYNPLLHGFCKE---KKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+   CKD  +  A+++  ++ S G +  ++TYN++I+GL   GK + A+ L DEM   G
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           LKP+++T ++L++G  ++  V++A   F D+   G+ P+ ITYN+++   CK  + + A 
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 382

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
                M+ +   P  +TY  LI G++ EG  +   +++NEL + G+
Sbjct: 383 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 150/274 (54%), Gaps = 10/274 (3%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F+  +   CK+  +  AMK+ +EM + G    VVTYN LING+C +G+LDEA+   + M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G +PNV+T N ++   C       A  L  D+  +G SPSV+T+N LI+  C++G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  +   M   G  P+  +YN L+ G  +E  ++     ++ +V+ G    +VTYN L+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            ALCKDGK   AV +L+++     +   P ++TYN +I G  + GK E A  LL+E+  K
Sbjct: 265 TALCKDGKVDVAVEILNQL---SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321

Query: 502 GLIPNQTTYQIVREEMMEKG-------FIPDIEG 528
           GL P+  TY  +   +  +G       F  D+EG
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 355



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS+  + L+  + K  K     E        G    +++ N LL AL K+GK +    + 
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++  +     L ++N V++GL K GK  +A  ++++M+  G+ P ++TY+ L+ G  ++
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 340

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK+ +A   F D+   GI PN +T+N+++ G CK      A+     M S       
Sbjct: 341 ---GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            TY  LI G+  +G   EA+ L +E+ + GL
Sbjct: 398 ATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 5/158 (3%)

Query: 355 ISEQGLSP--SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           I++Q L P  S+  ++  +   CKE  +  A  + + M ++G  PDV TYN LI G+ +E
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G ++     +N + + G +  ++T+NI++ ++C  G+   A  LL +M    ++   P++
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML---RKGCSPSV 187

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           VT+N+LI   C++G L  A  +L ++   G  PN  +Y
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 225



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           +S ++  +    +E  V     +++E+ N G +  +VTYN+L+  +CK+G+  +A+  L+
Sbjct: 82  LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
            M     +   PN++T+N++++  C  G+  DA  LL+++L KG  P+  T+ I+   + 
Sbjct: 142 NMPSYGCQ---PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 519 EKGFI 523
            +G +
Sbjct: 199 RQGLL 203


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 207/396 (52%), Gaps = 7/396 (1%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           M++  Y +          F   G YG K S+ SCN LL  LVK G+      VY +M+R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            I  ++ +   ++N  CKAGK+ +A + + +M+ LG     V+YN L+DGY     +G +
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVS---LGDI 117

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNS 299
             A  V K M E G++ N+VT   LI G+CK   +  A KV  EM    G+      Y +
Sbjct: 118 EGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGA 177

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G C  GK+ +A+ +RDEM+  GLK N+   N+LING+CK   V +   L   + +  
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P   +Y TL+D YC++G    AF + + ML +G+ P V TYN L+ GL R G+ +   
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + + ++  G+    V Y  L+  L K G   +A++L D++      K   +I  +N +I
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINK---SIYAFNTMI 354

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            G C+ G+++ A      + E G  P+  TY+ + +
Sbjct: 355 NGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSD 390



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 202/432 (46%), Gaps = 70/432 (16%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL  L K G F     ++ ++  R I  ++ +FN ++NGLCK G+++ A +  + M+ LG
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELG 377

Query: 217 VSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKAD 244
             P  +TY  L DGYCK G +                                 K+ K  
Sbjct: 378 CKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLI 437

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +  +M   G+ PN VT+  LI G+C    +  A   + EM   G A  V+  + +++ L
Sbjct: 438 DLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSL 497

Query: 305 CVDGKLDEAVALRDEMM--------------------------------ASGLK---PNV 329
              G++DEA  L  +M+                                 S +K   PN 
Sbjct: 498 YRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNN 557

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N  + G CK   V  AR  F  +S    +P   TY TLI  +   G + +AF +R+ 
Sbjct: 558 VVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDE 617

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++G++P+++TYN L+ GL + G ++  R + ++L   G+   +VTYNIL+   CK G 
Sbjct: 618 MVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGS 677

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A   LD   KM KE   P+I+TY+ LI GFC++  +E+A  LLNE+    +     T
Sbjct: 678 PREA---LDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIAT 734

Query: 510 YQIVREEMMEKG 521
           +  + E  ++ G
Sbjct: 735 FSKLVEGCIQHG 746



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 199/392 (50%), Gaps = 7/392 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           RN + + +L+  Y K  K     +  +    + G+     +   L+    K GK  D   
Sbjct: 134 RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIR 193

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           V  EM +  +++NL   N ++NG CK G++++   ++  M+ L + P   +Y  L+DGYC
Sbjct: 194 VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           + G   K +    V   M+  GI P  VT+NTL+ G C+  +   A++++  M   G+  
Sbjct: 254 RDGLSSKAFN---VCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTP 310

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             V Y +L++GL   G    A+ L D+++A G+  ++   N +ING CK   ++ A+  F
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETF 370

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + E G  P  ITY TL D YCK G +E+AF ++  M    + P +  YN LI GL   
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTS 430

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +  + +++ E+   G+   +VTY  L+   C  G+  KA S     F+M  +   PN+
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS---AYFEMIGKGFAPNV 487

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           +  + ++    + G++++AN LL ++++  L+
Sbjct: 488 IICSKIVSSLYRLGRIDEANMLLQKMVDFDLV 519



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 212/441 (48%), Gaps = 57/441 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +V++ N LL+ L + G ++D   ++  M +R +  N   +  +L+GL K G  ++A
Sbjct: 272 GIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRA 331

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + +D+ + G++  +  +N +I+G CK   +G+M  A   FK M E G  P+ +T+ TL
Sbjct: 332 LTLWDDILARGINKSIYAFNTMINGLCK---MGEMDGAKETFKRMEELGCKPDGITYRTL 388

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            DG+CK  N+  A K+ E+M    I   +  YNSLI GL    K+ + + L  EM   GL
Sbjct: 389 SDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGL 448

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT  ALI G+C +  ++KA   + ++  +G +P+VI  + ++ +  + GR+++A  
Sbjct: 449 SPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANM 508

Query: 386 MRNSMLD-----------------------------------RGVLPDVSTYNCLIAGLS 410
           +   M+D                                   +  LP+   YN  +AGL 
Sbjct: 509 LLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLC 568

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G V   R     L +        TY  L+      G   +A +L DEM     +   P
Sbjct: 569 KSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVN---KGLVP 625

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           NI TYN L+ G C+ G L+ A  L ++L  KGLIPN  TY I                +R
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
            +M+++G  P I  +   I+G
Sbjct: 686 GKMLKEGISPSIITYSSLING 706



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 39/344 (11%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L    K   +  +  EM  R +  N+ ++  ++ G C  G+L+KA     +M  
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV----------------------- 251
            G +P V+  + ++    +   +G++ +A+ + + MV                       
Sbjct: 481 KGFAPNVIICSKIVSSLYR---LGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLD 537

Query: 252 ---------ENGI---LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
                    E+ I   LPN V +N  + G CK   ++ A + F  +          TY +
Sbjct: 538 CWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCT 597

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G    G ++EA  LRDEM+  GL PN+ T NAL+NG CK   +++AR LFD +  +G
Sbjct: 598 LIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKG 657

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P+V+TYN LID YCK G   +A  +R  ML  G+ P + TY+ LI G  ++ +VE   
Sbjct: 658 LIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAM 717

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            ++NE+  + +   + T++ LV    + G  KK +S L  M  M
Sbjct: 718 KLLNEMKASNVDQTIATFSKLVEGCIQHGDVKK-MSKLHNMMHM 760



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 8/362 (2%)

Query: 79  YPKIRSFLHMFVKNGKFTS--VSTIFHALSTC-SDSLCRNSIIIDMLMLAYVKNMKPHLG 135
           +P I  +  + V  G FTS  +S +   L+   +  L  N +    L+  +    +    
Sbjct: 414 FPSIEMYNSLIV--GLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKA 471

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F A+      G   +V+ C++++ +L + G+ ++   + ++M    + L+        N 
Sbjct: 472 FSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNA 531

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
             +     K +D +++       P  V YNI + G CK G   K+  A   F  +     
Sbjct: 532 DIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSG---KVNDARRFFLGLSHGSF 588

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+  T+ TLI GF     ++ A  + +EM + G+   + TYN+L+NGLC  G LD A  
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L D++   GL PNVVT N LI+G+CK     +A  L   + ++G+SPS+ITY++LI+ +C
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+  +E+A  + N M    V   ++T++ L+ G  + G+V+ +  + N +      AG+ 
Sbjct: 709 KQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGIT 768

Query: 436 TY 437
           ++
Sbjct: 769 SH 770


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 210/390 (53%), Gaps = 16/390 (4%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           RA  YG+   ++SC      L K G F++   +   M+ +R +    +++ ++N LCK  
Sbjct: 44  RASGYGI---LISC------LCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLN 94

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           ++ +A +++E M      P  +TY  +++  CK   I     A A  ++M   GI P+  
Sbjct: 95  RVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDD---ALATVEEMATRGIKPDAF 150

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            +N ++ G C++E +  A  +FE+M    I   VVTYN+LINGLC   +++ A  L  EM
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              G  P  V+ N LI+GFCKKK +  A+ +FD +      P+V+TY TLID   K G++
Sbjct: 211 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 270

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  + + M+ +GV P+V+TY+CLI G  +   V+    ++ ++V  G+   +VTYNIL
Sbjct: 271 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 330

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + +LC+  K + A  L      M + +  P +VTYN L++  C   +L+ A+ L  E++ 
Sbjct: 331 LNSLCRADKLEDAFKLFR---GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 387

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           KG  P+  TY  +   +   G + + +  M
Sbjct: 388 KGCPPDAITYDTLAWGLTRAGKVHEAQELM 417



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 179/309 (57%), Gaps = 3/309 (0%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+   ++  L K  + +D     +EM  R I+ +   +NFVL+GLC+  K+ +A  + E 
Sbjct: 115 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    ++P VVTYN LI+G CK   I   Y+   +FK+M   G +P EV++NTLIDGFCK
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYE---LFKEMAGKGYVPTEVSYNTLIDGFCK 231

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            +++ AA  VF++M        VVTY +LI+GL   GK+  A  + D M+  G+ PNV T
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LI+GFCK + V++A  L + +  QG++P+V+TYN L+++ C+  ++EDAF +   M 
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 351

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R   P V TYN L+  L     ++G   +  E++  G     +TY+ L   L + GK  
Sbjct: 352 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 411

Query: 452 KAVSLLDEM 460
           +A  L+++M
Sbjct: 412 EAQELMEKM 420



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  RR+     +FN V +G  KAG+L +  ++ + M   G + +   Y ILI   CK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             + YK   +   M         + ++T+I+  CK   +  A ++ E+M  +      +T
Sbjct: 61  FDEAYK---LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALT 116

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  ++  LC   ++D+A+A  +EM   G+KP+    N +++G C+++ VE+AR+LF+ + 
Sbjct: 117 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 176

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           +Q ++P+V+TYNTLI+  CK  R+E A+ +   M  +G +P   +YN LI G  ++ ++ 
Sbjct: 177 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             +++ +++V +     +VTY  L+  L K GK + A  +LD M K   +   PN+ TY+
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK---KGVTPNVATYS 293

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
            LI GFC+  ++++A+ LL +++ +G+ P   TY I+     R + +E  F
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 162/280 (57%), Gaps = 3/280 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K      N +L  L +E K E+   ++++M ++RI  N+ ++N ++NGLCKA ++  A
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 203

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M   G  P  V+YN LIDG+CKK     +  A  VF  MV +  +PN VT+ TL
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFCKK---KDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  K   + AA +V + M   G+   V TY+ LI+G C   ++DEA  L ++M+  G+
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P VVT N L+N  C+   +E A  LF  ++++   P+V+TYNTL+ A C   +++ A  
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +   M+ +G  PD  TY+ L  GL+R G V   + +M ++
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 129/252 (51%), Gaps = 3/252 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++     +  +V++ N L+  L K  + E    ++KEM  +       S+N +++G CK
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
              L  A D+ + M      P VVTY  LIDG  K    GK+  A  V   MV+ G+ PN
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVKKGVTPN 288

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T++ LIDGFCK   +  A K+ E+M + GIA  VVTYN L+N LC   KL++A  L  
Sbjct: 289 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M      P VVT N L+   C  K ++ A  L+ ++  +G  P  ITY+TL     + G
Sbjct: 349 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 408

Query: 379 RMEDAFAMRNSM 390
           ++ +A  +   M
Sbjct: 409 KVHEAQELMEKM 420



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 3/248 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+    K  +    +E FK     G   + +S N L+    K+      + V+
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M R     N+ ++  +++GL K+GK+  A+++++ M   GV+P V TY+ LIDG+CK 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK- 301

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + ++ +A  + + MV  GI P  VT+N L++  C+ + +  A K+F  M        V
Sbjct: 302 --VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+L+  LC   +LD A  L  EM+A G  P+ +T + L  G  +   V +A+ L + 
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 355 ISEQGLSP 362
           +     +P
Sbjct: 420 MKLTKRNP 427


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 233/443 (52%), Gaps = 8/443 (1%)

Query: 82  IRSFLHMFVKNGKFT-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           + SFL  + +   F  +V  + + L      +  ++++ + L+   V+  K  L    + 
Sbjct: 116 VHSFLESYARQQLFVDAVDLVLNQLDPLF-GIQADTVVYNHLLNVLVEGSKMKLLETVYS 174

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
             G+ G+K  V++ N L++AL +  +      + +EM    +  +  +F  ++ G  + G
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            +  A  +   M  +G SP  VT N+LI+GYCK   +G++  A    +  + NG  P+++
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCK---LGRVEDALGYIQQEIANGFEPDQI 291

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+NT ++G C++ ++  A+KV + M   G    V TYN ++N LC +G+L+EA  + ++M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G  P++ T N LI   C    +E+A  L   ++ +GLSP V T+N LI+A CK G  
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  +   M   G  PD  TYN LI  L   G +    +++ E+ + G     VTYN +
Sbjct: 412 QLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LCK  + ++A  + D+   M+ +    N +T+N LI G C+  +++DAN L+++++ 
Sbjct: 472 IDGLCKKMRIEEAEEVFDQ---MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528

Query: 501 KGLIPNQTTYQIVREEMMEKGFI 523
           +GL PN  TY  +     ++G I
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDI 551



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 234/470 (49%), Gaps = 60/470 (12%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  +      LM  +V+            R  + G   + ++ N L+    K G+ E
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272

Query: 169 D-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           D + Y+ +E+     E +  ++N  +NGLC+ G +  A  +M+ M   G  P V TYNI+
Sbjct: 273 DALGYIQQEIANG-FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI--------------------- 266
           ++  CK G   ++ +A  +   MVE G LP+  TFNTLI                     
Sbjct: 332 VNCLCKNG---QLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388

Query: 267 --------------DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
                         +  CK  +   A+++FEEM S G     VTYN+LI+ LC  GKL +
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ L  EM ++G   + VT N +I+G CKK  +E+A  +FD +  QG+S + IT+NTLID
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK+ R++DA  + + M+  G+ P+  TYN ++    ++G+++   +I+  +  NG   
Sbjct: 509 GLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VTY  L+  LCK G+++ A+ LL  M +++  +  P    YN +I+   ++    DA 
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKLLRGM-RIKGMRATPK--AYNPVIQSLFRRNNTRDAM 625

Query: 493 GLLNELLEKGLIPNQTTYQIV-----------RE------EMMEKGFIPD 525
            L  E+ E G  P+  TY+IV           RE      EM++KGFIP+
Sbjct: 626 NLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 213/387 (55%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V + N ++  L K G+ E+ + +  +M  R    ++ +FN ++  LC   +L +A
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   +   G+SP V T+NILI+  CK   +G    A  +F++M  +G  P+EVT+NTL
Sbjct: 380 LDLARQVTLKGLSPDVYTFNILINALCK---VGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C    +  A+ + +EM S G     VTYN++I+GLC   +++EA  + D+M   G+
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +T N LI+G CK K ++ A  L   +  +GL P+ ITYN+++  YCK+G ++ A  
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 556

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G   DV TY  LI GL + G  +    ++  +   GMRA    YN ++ +L 
Sbjct: 557 ILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLF 616

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG-KLEDANGLLNELLEKGLI 504
           +   ++ A++L  EM ++ +    P+  TY ++ +G C+ G  + +A   L E+++KG I
Sbjct: 617 RRNNTRDAMNLFREMTEVGEP---PDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI 673

Query: 505 PNQTTYQIVREEMMEKG----FIPDIE 527
           P  ++++++ E ++  G    FI  IE
Sbjct: 674 PEFSSFRMLAEGLLNLGMDDYFIRAIE 700



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 186/339 (54%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +LN L +  K+     +  +M   G+ P VVT+N L+   C+     ++  A  + +
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAH---QVRTAVLMLE 209

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M  +G+ P+E TF TL+ GF ++ +I AA++V   M   G +   VT N LING C  G
Sbjct: 210 EMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLG 269

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++++A+    + +A+G +P+ +T N  +NG C+   V  A  + D + ++G  P V TYN
Sbjct: 270 RVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYN 329

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +++  CK G++E+A  + N M++RG LPD++T+N LI  L     +E   ++  ++   
Sbjct: 330 IVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + T+NIL+ ALCK G  + A+ L +E   M+     P+ VTYN LI   C  GKL
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEE---MKSSGCTPDEVTYNTLIDNLCSLGKL 446

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             A  LL E+   G   +  TY  + + + +K  I + E
Sbjct: 447 GKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 32/340 (9%)

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN------GILPNEVT 261
           ++ +M+  G   +V   +  ++ Y ++    +++  DAV  D+V N      GI  + V 
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQ----QLF-VDAV--DLVLNQLDPLFGIQADTVV 152

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N L++   +   +     V+ EMG  GI   VVT+N+L+  LC   ++  AV + +EM 
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           +SG+ P+  T   L+ GF ++  ++ A  +   + E G SP+ +T N LI+ YCK GR+E
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA       +  G  PD  TYN  + GL + G+V     +M+ +V  G    + TYNI+V
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK+G+ ++A  +L++M    +    P+I T+N LI   C   +LE+A  L  ++  K
Sbjct: 333 NCLCKNGQLEEAKGILNQMV---ERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389

Query: 502 GLIPNQTTYQI----------------VREEMMEKGFIPD 525
           GL P+  T+ I                + EEM   G  PD
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 19/219 (8%)

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++ + V  N L+N   +   ++    ++ ++ E+G+ P V+T+NTL+ A C+  ++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M   M   GV PD +T+  L+ G   EG+++    +   ++  G     VT N+L+  
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G+ + A+  + +      E   P+ +TYN  + G CQ G +  A  +++ ++++G 
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFE---PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321

Query: 504 IPNQTTYQIV----------------REEMMEKGFIPDI 526
            P+  TY IV                  +M+E+G +PDI
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 4/227 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R+++  + ++    K M+     E F +    G+  + ++ N L+  L K+ + +D   +
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ N  ++N +L   CK G + KA+DI++ M + G    VVTY  LI+G CK
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCK 582

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+   A  + + M   G+      +N +I    +  N   AM +F EM   G    
Sbjct: 583 A---GRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPD 639

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
             TY  +  GLC   G + EA     EM+  G  P   +   L  G 
Sbjct: 640 AFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR--GVLPDVSTYNCLI 406
           +VL  ++  +G    V   ++ +++Y ++    DA  +  + LD   G+  D   YN L+
Sbjct: 98  KVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLL 157

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L     ++ +  + +E+   G++  +VT+N L+ ALC+  + + AV +L+EM      
Sbjct: 158 NVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM---SSS 214

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+  T+  L++GF ++G ++ A  +   +LE G  P + T  ++     + G + D 
Sbjct: 215 GVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDA 274

Query: 527 EGHM 530
            G++
Sbjct: 275 LGYI 278


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 206/373 (55%), Gaps = 8/373 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+ K  KFE V  + ++M+   I  +L +++  +N  C+  +L+ A  ++
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+  TF TLI G 
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRIS---DAVALVDQMVEMGYKPDTFTFTTLIHGL 198

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + ++M   G    +VTY +++NGLC  G +D A+ L ++M A+ +K NV
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+  CK + VE A  LF ++  +G+ P+V+TYN+LI+  C  GR  DA  + ++
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML++ + P+V T+N LI    +EG +     +  E++   +    +TYN+L+   C   +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A     +MFK M  +   PNI TYN LI GFC+  ++ED   L  E+ ++GL+ N  
Sbjct: 379 LDEA----KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 509 TYQIVREEMMEKG 521
           TY  + +   + G
Sbjct: 435 TYTTIIQGFFQAG 447



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 203/396 (51%), Gaps = 25/396 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    +  +M+  RI+ N+  FN +++ LCK   +  A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M++ G+ P VVTYN LI+  C     G+   A  +  +M+E  I PN VTFN L
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLC---NYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+ EEM    I    +TYN LING C+  +LDEA  +   M++   
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+ T N LINGFCK K VE    LF ++S++GL  + +TY T+I  + + G  + A  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+   V  D+ TY+ L+ GL   G ++    I   L  + M   +  YN ++  +C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK  +A  L   +         P++VTYN +I G C K  L++A+ L  ++ E G +P
Sbjct: 515 KAGKVGEAWDLFCSL------SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568

Query: 506 NQTTYQ-IVR---------------EEMMEKGFIPD 525
           N  TY  ++R               +EM   GF+ D
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 184/346 (53%), Gaps = 6/346 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +I + ++ +  K     +  + F      G++ +V++ N L+  L   G++ D   + 
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  ++I  N+ +FN +++   K GKL +A  + E+M    + P  +TYN+LI+G+C  
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++ +A  +FK MV    LPN  T+NTLI+GFCK + +   +++F EM   G+    
Sbjct: 377 ---NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY ++I G    G  D A  +  +M+++ +  +++T + L++G C    ++ A V+F  
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + +  +  ++  YNT+I+  CK G++ +A+ +  S+    + PDV TYN +I+GL  +  
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           ++   ++  ++  +G      TYN L+ A  +D     +  L+ EM
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 3/291 (1%)

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I K+  A  +F DMV++   P+ V FN L+    K       + + E+M + GI+  + T
Sbjct: 61  IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y+  IN  C   +L  A+A+  +MM  G +P++VT ++L+NG+C  K +  A  L D + 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E G  P   T+ TLI       +  +A A+ + M+ RG  PD+ TY  ++ GL + G+++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++N++    ++A +V +N ++ +LCK    + AV L  E   ME +   PN+VTYN
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE---METKGIRPNVVTYN 297

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            LI   C  G+  DA+ LL+ +LEK + PN  T+  + +   ++G + + E
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 171/307 (55%), Gaps = 7/307 (2%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ N L+ A  KEGK  + E +++EM +R I+ +  ++N ++NG C   +L++A 
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + + M S    P + TYN LI+G+CK     ++     +F++M + G++ N VT+ T+I
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCK---CKRVEDGVELFREMSQRGLVGNTVTYTTII 440

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GF +  +  +A  VF++M S+ +   ++TY+ L++GLC  GKLD A+ +   +  S ++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N+   N +I G CK   V +A  LF  +S   + P V+TYNT+I   C +  +++A  +
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDL 557

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+  TYN LI    R+ +      ++ E+ ++G      T + LV  +  
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLH 616

Query: 447 DGKSKKA 453
           DG+  K+
Sbjct: 617 DGRLDKS 623


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 234/463 (50%), Gaps = 19/463 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH     +  P +  F  +          ST+  +LS   DSL    I  D+  LA V
Sbjct: 64  RMLH----MQPPPSVVDFAKILTSIANMKHYSTVL-SLSKQMDSL---GIPSDVYTLAIV 115

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL     GF    +    G +    +   L+R L  EGK  +  +++ +M     
Sbjct: 116 INSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGF 175

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + N  ++  +++GLCK G    A  ++  M      P V+TYN +ID   K   +    +
Sbjct: 176 QPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN---E 232

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +F +M+  GI PN  T+N++I G CK         +  EM    I   VV + +L++
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +G +  A  + D M+  G++P+VVT  AL++G C +  +++A  +FD +  +G +P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +VI+Y+TLI+ YCK  R++ A  +   M  R ++P++ TYN LI GL   G +     + 
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+V +G    LVTY IL+  LCK     +A+++L     +E     P+I +YN++I G 
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK---AIEGSNLAPDIQSYNIVIDGM 469

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           C+ G+LE A  L + L  KGL P+  TY I+   +  +G + +
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 6/379 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        SV+   ++L ++     +  V  + K+M    I  ++ +   V+N
Sbjct: 58  ALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVIN 117

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +++    ++  +  LG  P   T+  LI G C +G IG+   A  +F  MV  G
Sbjct: 118 SFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE---ALHLFDKMVGEG 174

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI G CK  N  AA+++   M        V+TYN++I+ L  D +++EA+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM+A G+ PNV T N++I+G CK    +    L +++ +  + P+V+ + TL+DA 
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG +  A  + + M+ RGV PDV TY  L+ G      ++    + + +V  G    +
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++Y+ L+   CK  +  KA+ L +EM + E     PNIVTYN LI G C  G+L DA  L
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRE---LVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 495 LNELLEKGLIPNQTTYQIV 513
            +E++  G IP+  TY+I+
Sbjct: 412 FHEMVASGQIPDLVTYRIL 430



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 206/396 (52%), Gaps = 23/396 (5%)

Query: 67  GRLLHSLV-VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           G L+H L  V      IR    M  KN               C  ++   + IID L   
Sbjct: 183 GTLIHGLCKVGNSRAAIRLLRSMVQKN---------------CEPNVITYNTIIDCLF-- 225

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K+ + +     F      G+  +V + N ++  L K  +++ V  +  EM   +I  N
Sbjct: 226 --KDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           +  F  +++ LCK G +  A D+++ M   GV P VVTY  L+DG+C +    +M +AD 
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRS---EMDEADK 340

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           VF  MV  G  PN ++++TLI+G+CK + I  AM +FEEM    +   +VTYN+LI+GLC
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G+L +A+AL  EM+ASG  P++VT   L++  CK + +++A  +   I    L+P + 
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQ 460

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +YN +ID  C+ G +E A  + +S+  +G+ PDV TY  +I GL  +G +     +  E+
Sbjct: 461 SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
             +G      TYN++     ++ ++  A+ LL EM 
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEML 556



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 3/319 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  +  +V+    L+ AL KEG       V   M +R +E ++ ++  +++G C   +++
Sbjct: 277 DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + + M   G +P V++Y+ LI+GYCK   I ++ KA  +F++M +  ++PN VT+N
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLINGYCK---IQRIDKAMYLFEEMCQRELVPNIVTYN 393

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI G C    +  A+ +F EM + G    +VTY  L++ LC    LD+A+A+   +  S
Sbjct: 394 TLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGS 453

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L P++ + N +I+G C+   +E A  LF  +S +GL P V TY  +I+  C +G + +A
Sbjct: 454 NLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEA 513

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M   G  PD  TYN +  G  R         ++ E++  G  A   T  ++V  
Sbjct: 514 TKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEM 573

Query: 444 LCKDGKSKKAVSLLDEMFK 462
           L  DG  +    +L E  +
Sbjct: 574 LSDDGLDQSVKQILHEFVQ 592



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 174/344 (50%), Gaps = 5/344 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H   K  ++  V+T+ + +      +  N +I   L+ A  K     +  +      
Sbjct: 254 SIIHGLCKFSEWKHVATLMNEM--VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++  V++   L+       + ++ + V+  M R+    N+ S++ ++NG CK  +++
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  + E+M    + P +VTYN LI G C    +G++  A A+F +MV +G +P+ VT+ 
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCH---VGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+D  CK  ++  AM + + +    +A  + +YN +I+G+C  G+L+ A  L   + + 
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+V T   +ING C + L+ +A  LF +++  G SP   TYN +   + +      A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             +   ML RG   D ST   ++  LS +G  + V+ I++E V 
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 143/284 (50%), Gaps = 9/284 (3%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A + F  M+     P+ V F  ++      ++ S  + + ++M S GI + V T   +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C   ++D   ++  ++   G +P+  T   LI G C +  + +A  LFD +  +G  
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TY TLI   CK G    A  +  SM+ +   P+V TYN +I  L ++  V    NI
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++  G+   + TYN ++  LCK  + K   +L++EM      K  PN+V +  L+  
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMV---DSKIMPNVVIFTTLVDA 293

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY------QIVREEMME 519
            C++G +  A+ +++ ++++G+ P+  TY        +R EM E
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDE 337



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 3/250 (1%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            I  A+  F  M        VV +  ++  +         ++L  +M + G+  +V T  
Sbjct: 54  TIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +IN FC    V+    +   I + G  P   T+ TLI   C EG++ +A  + + M+  
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+  TY  LI GL + GN      ++  +V       ++TYN ++  L KD +  +A
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +++  EM     +   PN+ TYN +I G C+  + +    L+NE+++  ++PN   +  +
Sbjct: 234 LNIFSEMI---AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 514 REEMMEKGFI 523
            + + ++G +
Sbjct: 291 VDALCKEGMV 300


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 209/370 (56%), Gaps = 6/370 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  KR     ++ + +  N ++  + K     D   +Y +M  +RI  ++ ++N +++
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALIS 244

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G     KLN A D+   MK   ++P V T+NIL+DG+CK+G   K+  A  V   M+++ 
Sbjct: 245 GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG---KVNDAKVVLAIMMKDD 301

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ VT+N+L+DG+C    ++ A  +F+ M S G+ A V  Y +++NG C    +DEA+
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM    + PNVVT ++LI+G CK   +  A  L D++ ++G  P+++TY++++DA 
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++ A A+  ++ D+G+ PD+ TY  LI GL + G +E  +N+  +L+  G    +
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDV 481

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y +++   C  G   KA++LL    KME     PN  TY ++I    +K + + A  L
Sbjct: 482 YAYTVMIQGFCDKGFFDKALALLS---KMEDNGCIPNAKTYELVILSLFEKDENDTAEKL 538

Query: 495 LNELLEKGLI 504
           L E++ +GL+
Sbjct: 539 LREMIVRGLL 548



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 235/471 (49%), Gaps = 25/471 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           ++L SLV AK +    S       NG  +   T F+ L  C   L  NS+   +      
Sbjct: 66  KILSSLVKAKHHSTALSLHQQMELNGIESDFFT-FNILINCFSQLGLNSLSFSIFAKILK 124

Query: 128 KNMKP------------------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           K   P                  H       +    G     +S   L+  L K G+   
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 184

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + K +  + ++ N   +N +++ +CKA  +N A D+   M +  + P V TYN LI 
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALIS 244

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+     + K+  A  +F  M +  I PN  TFN L+DGFCK+  ++ A  V   M    
Sbjct: 245 GF---SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   VVTYNSL++G C   K+++A  + D M + G+  NV     ++NGFCK K+V++A 
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF+++  + + P+V+TY++LID  CK GR+  A  + + M DRG  P++ TY+ ++  L
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +  +V+    ++  L + G+R  + TY IL+  LC+ G+ + A ++ +++     +   
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV---KGYN 478

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            ++  Y V+I+GFC KG  + A  LL+++ + G IPN  TY++V   + EK
Sbjct: 479 LDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 187/346 (54%), Gaps = 3/346 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+++ +M++    K    +  F+ + +     +   V + N L+       K      ++
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +MK+  I  N+ +FN +++G CK GK+N A  ++  M    + P VVTYN L+DGYC  
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYC-- 317

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             I K+ KA  +F  M   G++ N   + T+++GFCK + +  A+ +FEEM    I   V
Sbjct: 318 -SINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY+SLI+GLC  G++  A+ L DEM   G  PN+VT +++++  CK   V+KA  L  +
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN 436

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + +QG+ P + TY  LI   C+ GR+EDA  +   +L +G   DV  Y  +I G   +G 
Sbjct: 437 LKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGF 496

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +    +++++ +NG      TY +++ +L +  ++  A  LL EM
Sbjct: 497 FDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 196/363 (53%), Gaps = 6/363 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L +LVK         ++++M+   IE +  +FN ++N   + G  + +  I   +  
Sbjct: 65  NKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILK 124

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P  +T+N LI G C KG I   ++A      +V  G   ++V++ TLI+G CK   
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHI---HQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I+AA+++ + +    +    V YN +I+ +C    +++A  L  +M+A  + P+V T NA
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+GF     +  A  LF+ + ++ ++P+V T+N L+D +CKEG++ DA  +   M+   
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PDV TYN L+ G      V   ++I + + + G+ A +  Y  +V   CK     +A+
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           +L +E   M   K  PN+VTY+ LI G C+ G++  A  L++E+ ++G  PN  TY  + 
Sbjct: 362 NLFEE---MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 515 EEM 517
           + +
Sbjct: 419 DAL 421



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 41/412 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++S   + N L+    + G       ++ ++ ++       +FN ++ GLC  G +++A
Sbjct: 91  GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA 150

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + + G     V+Y  LI+G CK   +G++  A  + K +    + PN V +N +
Sbjct: 151 LHFHDKVVAQGFHLDQVSYGTLINGLCK---VGRITAALQLLKRVDGKLVQPNAVMYNMI 207

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK + ++ A  ++ +M +  I   V TYN+LI+G     KL+ A+ L ++M    +
Sbjct: 208 IDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENI 267

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV T N L++GFCK+  V  A+V+   + +  + P V+TYN+L+D YC   ++  A  
Sbjct: 268 NPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKD 327

Query: 386 MRNSMLDRGV-----------------------------------LPDVSTYNCLIAGLS 410
           + +SM   GV                                   +P+V TY+ LI GL 
Sbjct: 328 IFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLC 387

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G +     +++E+ + G    +VTY+ ++ ALCK+    KA++LL     ++ +   P
Sbjct: 388 KLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN---LKDQGIRP 444

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           ++ TY +LIKG CQ G+LEDA  +  +LL KG   +   Y ++ +   +KGF
Sbjct: 445 DMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGF 496



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 171/319 (53%), Gaps = 3/319 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +C +    + L+  +    K +   + F +     +  +V + N L+    KEGK  D +
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V   M +  I+ ++ ++N +++G C   K+NKA DI + M S GV   V  Y  +++G+
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   I  + +A  +F++M    I+PN VT+++LIDG CK   I  A+K+ +EM   G  
Sbjct: 352 CK---IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTY+S+++ LC +  +D+A+AL   +   G++P++ T   LI G C+   +E A+ +
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+D+  +G +  V  Y  +I  +C +G  + A A+ + M D G +P+  TY  +I  L  
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528

Query: 412 EGNVEGVRNIMNELVNNGM 430
           +   +    ++ E++  G+
Sbjct: 529 KDENDTAEKLLREMIVRGL 547



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P    FN ++    K ++ S A+ + ++M  +GI +   T+N LIN     G    + ++
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G  P  +T N LI G C K  + +A    D +  QG     ++Y TLI+  CK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR+  A  +   +  + V P+   YN +I  + +   V    ++ +++V   +   + T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+       K   A+ L +   KM+KE   PN+ T+N+L+ GFC++GK+ DA  +L 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFN---KMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295

Query: 497 ELLEKGLIPNQTTY 510
            +++  + P+  TY
Sbjct: 296 IMMKDDIKPDVVTY 309



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 5/272 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K GK      +   +    D +  + +  + LM  Y    K +   + F      G+ 
Sbjct: 281 FCKEGKVNDAKVVLAIMM--KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVI 338

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           ++V     ++    K    ++   +++EM+ R+I  N+ +++ +++GLCK G++  A  +
Sbjct: 339 ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKL 398

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +++M   G  P +VTY+ ++D  CK   +    KA A+  ++ + GI P+  T+  LI G
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVD---KAIALLTNLKDQGIRPDMYTYTILIKG 455

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+   +  A  VFE++   G    V  Y  +I G C  G  D+A+AL  +M  +G  PN
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
             T   +I    +K   + A  L  ++  +GL
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 3/165 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P    +N ++ +  K      A ++   M   G+  D  T+N LI   S+ G      +
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           I  +++  G     +T+N L+  LC  G   +A+   D   K+  +    + V+Y  LI 
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHD---KVVAQGFHLDQVSYGTLIN 174

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           G C+ G++  A  LL  +  K + PN   Y ++ + M +   + D
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVND 219



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 359 GLSPSVIT-YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           GL PS I  ++ L     +E  +  +F   + +L +   P    +N +++ L +  +   
Sbjct: 22  GLFPSSIRLFSQLHHKQDEENNLISSF--NHLLLHKNPTPPTFQFNKILSSLVKAKHHST 79

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             ++  ++  NG+ +   T+NIL+    + G +  + S+     K+ K+   P  +T+N 
Sbjct: 80  ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFA---KILKKGYHPTAITFNT 136

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           LIKG C KG +  A    ++++ +G   +Q +Y
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSY 169


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 231/435 (53%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +  P+ ++ + + V      S S +F A+ 
Sbjct: 1   FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   ++ AY+++       E ++   ++  +    +C ++L  L+K   
Sbjct: 61  ETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKY 120

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E        +L  FN +++  CK G++  A  + + +   G+ P VV++N 
Sbjct: 121 FKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNT 180

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY K G + + ++     K M  +G+ P+  T++ LI+G CK+  +    ++F+EM 
Sbjct: 181 LMNGYIKLGDLNEXFRLK---KAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEML 237

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P++VT N LI G CKK  ++
Sbjct: 238 DXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLK 297

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A+ L D++S +GL P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI
Sbjct: 298 QAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALI 357

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++  + TY +++   CK G       L+ E   M+++
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE---MQRD 414

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 415 GYVPSVVTYNVLMNG 429



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + ++ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 67  RSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 126

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMN 183

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++ + M + G+   V TY+ LINGLC + K+D+   L DEM+  GL P
Sbjct: 184 GYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVP 243

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP ++TYNTLI   CK+G ++ A  + 
Sbjct: 244 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLI 303

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 304 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQE 363

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + L+ E+   G +P+ 
Sbjct: 364 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 420

Query: 508 TTYQIV 513
            TY ++
Sbjct: 421 VTYNVL 426



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 128 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 187

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L+  M ASG++P+V T + LING CK+  ++    LFD++ + GL P+ +T
Sbjct: 188 LGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVT 247

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 248 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMS 307

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A    +   +M KE    + V Y  LI G CQ+G
Sbjct: 308 MKGLKPDKITYTTLIDGSCKEGDLETA---FEYRXRMIKENIRLDDVAYTALISGLCQEG 364

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 365 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 399



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ +I  + +   +  A++ +     H       T   +
Sbjct: 52  ASAVFAAILETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 111

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ FCK+  +  A+ +FD I++ GL
Sbjct: 112 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGL 171

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G + + F ++ +M   GV PDV TY+ LI GL +E  ++    
Sbjct: 172 RPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNE 231

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M         P++VTYN LI 
Sbjct: 232 LFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS---PDLVTYNTLIY 288

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 289 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 318



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 19  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 59

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ +I AY + G + DA        +        T   ++  L +  
Sbjct: 60  LETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 119

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ + CK+G+ + A S+ D +       KW   P
Sbjct: 120 YFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAI------TKWGLRP 173

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L +   L   +   G+ P+  TY +                + 
Sbjct: 174 SVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELF 233

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 234 DEMLDXGLVPNGVTFTTLIDGHCKN 258


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 229/454 (50%), Gaps = 47/454 (10%)

Query: 115 NSIIIDMLM--LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED--- 169
           N+I+I+ L+  L   K ++  +     KR  + G    V+S N LL+    E + E+   
Sbjct: 128 NNIVINQLLKGLCDAKRLREAMDI-LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           + ++  + + R    N+ S+  V+NG    G+++KA ++  +M   G+ P VVTY  +ID
Sbjct: 187 LLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK   + +   A+ VF+ M++ G+ P+  T+N LI G+         +++ EEM +HG
Sbjct: 247 GLCKAQVVDR---AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC--------- 340
           +     TY SL+N LC +G+  EA    D M+  G+KPNV     LI+G+          
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 341 --------------------------KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
                                     KK ++++A  +F+ + +QGLSP V+ +  LIDA 
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR++DA    N M++ GV P++  +N L+ GL      E  +    E++N G+R  +
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V +N ++  LC  G+  KA  L+D    ME+    P++++Y  LI G C  G++++A   
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLID---LMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           L+ +L  GL P++ TY  +       G I D  G
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 205/417 (49%), Gaps = 14/417 (3%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF- 167
           +  LC  SI+I      + +  +   GF  F      G + + +  NQLL+ L    +  
Sbjct: 91  TPDLCTYSILIG----CFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLR 146

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTY 224
           E ++ + K M       ++ S+N +L G C   +  +A ++   M D +     P VV+Y
Sbjct: 147 EAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             +I+G+  +G + K Y    +F +M++ GI PN VT+ T+IDG CK + +  A  VF++
Sbjct: 207 ATVINGFFTEGQVDKAYN---LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+     TYN LI+G    GK  E V + +EM A GLKP+  T  +L+N  C    
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
             +AR  FD +  +G+ P+V  Y  LI  Y  +G + +   + N M++ G+ PD   +N 
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +    +++  ++   +I N++   G+   +V +  L+ ALCK G+   AV   ++M    
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM--- 440

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            E   PNI  +N L+ G C   K E A     E+L +G+ P+   +  +   +  KG
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 204/415 (49%), Gaps = 35/415 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GLK    +   LL  L   G+  +  + +  M R+ I+ N+  +  +++G    G L++
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             D++  M   G+SP    +NI+   Y KK  I +   A  +F  M + G+ P+ V F  
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE---AMHIFNKMKQQGLSPDVVNFGA 418

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID  CK   +  A+  F +M + G+A  +  +NSL+ GLC   K ++A     EM+  G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+VV  N ++   C K  V KA+ L D +   G  P VI+Y TLI  +C  GR+++A 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + ML  G+ PD  TYN L+ G  R G ++    +  E++ NG+  G+VTY+ ++  L
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 445 CKDGKSKKAVSL----------------------------LDEMFKMEK---EKKWP-NI 472
               +  +A  L                            +DE FK+ +    K +   I
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEI 658

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            T+N++I    + G+ EDA  L   +   GL+P+  TY ++ E ++E+G++ + +
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFD 713



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 176/323 (54%), Gaps = 11/323 (3%)

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           ++ V+P + TY+ILI  +C+   +G++    A F  ++++G   N +  N L+ G C  +
Sbjct: 87  TIKVTPDLCTYSILIGCFCR---MGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAK 143

Query: 274 NISAAMKVF-EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS---GLKPNV 329
            +  AM +  + M   G    VV+YN+L+ G C + + +EA+ L   M  S      PNV
Sbjct: 144 RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNV 203

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+   +INGF  +  V+KA  LF ++ ++G+ P+V+TY T+ID  CK   ++ A  +   
Sbjct: 204 VSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+D+GV PD  TYNCLI G    G  + V  ++ E+  +G++    TY  L+  LC +G+
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A    D M +   +   PN+  Y +LI G+  KG L + + LLN ++E GL P+   
Sbjct: 324 CREARFFFDSMIRKGIK---PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 510 YQIVREEMMEKGFIPDIEGHMYN 532
           + I+     +K  I D   H++N
Sbjct: 381 FNIIFTAYAKKAMI-DEAMHIFN 402



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 35/379 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +  A  K+   ++  +++ +MK++ +  ++ +F  +++ LCK G+++ A      M +
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P +  +N L+ G C    + K  KA   + +M+  GI P+ V FNT++   C    
Sbjct: 442 EGVAPNIFVFNSLVYGLCT---VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ + M   G    V++Y +LI G C+ G++DEA    D M++ GLKP+  T N 
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G+C+   ++ A  +F ++   G++P V+TY+T++       R  +A  +  +M+  G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              ++  YN ++ GLS+   V+    +   L +   +  + T+NI++GAL K G+++ A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 455 SLL-------------------------------DEMFK-MEKEKKWPNIVTYNVLIKGF 482
            L                                D++F  MEK    PN    N L++  
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 483 CQKGKLEDANGLLNELLEK 501
             +G +  A   L++L EK
Sbjct: 739 LHRGDITRAGAYLSKLDEK 757



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 170/325 (52%), Gaps = 8/325 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + G+  ++   N L+  L    K+E  +  Y EM  + I  ++  FN +L  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ KA  +++ M+ +G  P V++Y  LI G+C  G I +  K+  V   M+  G+ P+
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV---MLSVGLKPD 552

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T+NTL+ G+C+   I  A  VF EM  +GI  GVVTY+++++GL    +  EA  L  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG + N+   N ++NG  K   V++A  LF  +  +     + T+N +I A  K G
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIA-GLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           R EDA  +  ++   G++PDV TY CLIA  L  EG +E   ++ + +  +G        
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTY-CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731

Query: 438 NILVGALCKDGKSKKA---VSLLDE 459
           N LV  L   G   +A   +S LDE
Sbjct: 732 NALVRRLLHRGDITRAGAYLSKLDE 756



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 3/323 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  V+  N +L  L  +G+    + +   M+R     ++ S+  ++ G C  G++++A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +  ++ M S+G+ P   TYN L+ GYC+ G I   Y    VF++M+ NGI P  VT++T+
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY---GVFREMLRNGITPGVVTYSTI 594

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G       S A +++  M + G    +  YN ++NGL  +  +DEA  L   + +   
Sbjct: 595 LHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF 654

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +  + T N +I    K    E A  LF  IS  GL P V TY  + +   +EG +E+   
Sbjct: 655 QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDD 714

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + ++M   G  P+    N L+  L   G++      +++L          T  +L+  L 
Sbjct: 715 LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLS 774

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK 468
           +D     A SL ++   + + KK
Sbjct: 775 RDEYHHHATSLPEKYRVLNEAKK 797



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 48/268 (17%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+K+F+ + +H   A ++ +N L+  +                  SG + +   S  +++
Sbjct: 33  ALKLFDGLLTHARPASIIAFNHLLTAVS---------------RVSGRRSSTTESELVVS 77

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            F   +++ +  +         ++P + TY+ LI  +C+ GR+E  FA    +L  G   
Sbjct: 78  LF--NRMIRECTI--------KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV 127

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNN----GMRAGLVTYNILVGALCKDGKSKKA 453
           +    N L+ GL    + + +R  M+ L+      G    +V+YN L+   C + ++++A
Sbjct: 128 NNIVINQLLKGLC---DAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEA 184

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
           + LL  M   +     PN+V+Y  +I GF  +G+++ A  L  E++++G+ PN  TY   
Sbjct: 185 LELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244

Query: 513 ---------------VREEMMEKGFIPD 525
                          V ++M++KG  PD
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPD 272


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 210/406 (51%), Gaps = 41/406 (10%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N ++    KEG       ++KEM +R I  +L +++ V++ LCKA  ++KA   + 
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + GV P   TYN LI GY      G+  +A  VFK+M    ILP+ V  NTL+   C
Sbjct: 281 QMVNKGVLPDNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A  VF+ M   G    V +Y  ++NG    G L +   L D M+  G+ P + 
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR------------------- 431
           +D+GV+PD   Y+CLI G    G++   + +++E++NNGMR                   
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 432 ------------AGL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                        GL    V YN+L+   C  GK +KA+ + D M     E   PN+V Y
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE---PNVVGY 574

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             L+ G+C+ G++++   L  E+L+KG+ P+   Y I+ + + E G
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 235/482 (48%), Gaps = 23/482 (4%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG----KFTSVSTIFHALSTCS--------D 110
           L+    ++H+L  A+   K  +FL   V  G     +T  + I+   ST           
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315

Query: 111 SLCRNSIIIDM-----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
            + R SI+ D+     LM +  K  K     + F      G    V S   +L     +G
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
              D+  ++  M    I   + +FN ++      G L+KA  I  +M+  GV P VVTY 
Sbjct: 376 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +I   C+   IGKM  A   F  M++ G++P++  ++ LI GFC   ++  A ++  E+
Sbjct: 436 TVIAALCR---IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            ++G+   +V + S+IN LC  G++ +A  + D  +  GL P+ V  N L++G+C    +
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML +G+ P    YN +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G     +   +E+  +G+     TY+I++  L K+    +A+ L  E+  M  
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +    +I+T N +I G  Q  ++E+A  L   +   GL+P   TY I+   ++++G + +
Sbjct: 673 KI---DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 729

Query: 526 IE 527
            E
Sbjct: 730 AE 731



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 208/388 (53%), Gaps = 14/388 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALV-----KEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS      A++     +  + E     + ++ R  + ++ 
Sbjct: 89  PALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              + +L G C+A + ++A DI+      LG  P V +YNIL+   C +G  G+   AD 
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ---ADD 205

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  P+ V +NT+IDGF K+ +++ A  +F+EM   GI   +VTY+S+++ 
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +D+A A   +M+  G+ P+  T N LI G+      ++A  +F ++  Q + P 
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+  NTL+ + CK G++++A  + ++M  +G  PDV +Y  ++ G + +G +  + ++ +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+   + T+N+L+ A    G   KA+ + +E   M      P++VTY  +I   C
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE---MRDHGVKPHVVTYMTVIAALC 442

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + GK++DA    N+++++G++P++  Y 
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYH 470



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  +++ ++ G C 
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V +  +I+  CK   +G++  A  +F   V  G+ P+
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 535

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V +N L+DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  N +I+G  +      A+V F +++E G++ +  TY+ ++    K  
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  D+ T N +IAG+ +   VE  +++   +  +G+    VTY+
Sbjct: 656 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     P+    N +++   +K ++  A   L++
Sbjct: 716 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 771

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 772 IDERNFSLEHLTAMLLVDLFSSKG 795



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 3/321 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  ++    ++  L K G+  D + ++       +  +   +N +++G C  GK+ KA
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M S G+ P VV Y  L++GYCK   IG++ +  ++F++M++ GI P+ + +N +
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCK---IGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  +      A   F EM   GIA    TY+ ++ GL  +   DEA+ L  E+ A  +
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           K +++T N +I G  + + VE+A+ LF  IS  GL P  +TY+ +I    KEG +E+A  
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAED 732

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M +SM + G  PD    N ++  L ++  +      ++++         +T  +LV    
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 792

Query: 446 KDGKSKKAVSLLDEMFKMEKE 466
             G  ++ +  L   +    E
Sbjct: 793 SKGTCREQIRFLPAKYHFLAE 813



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 24/186 (12%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGV 418
           LSP+  TY  L+D   +  R E A A    +L  G+  D    + L+ G        E +
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTY 475
             +++     G    + +YNIL+ +LC  GKS +A    D++ +M  E      P++V Y
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA----DDLLRMMAEGGTVCSPDVVAY 224

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMME 519
           N +I GF ++G +  A  L  E++++G+ P+  TY  V                  +M+ 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 520 KGFIPD 525
           KG +PD
Sbjct: 285 KGVLPD 290


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 216/409 (52%), Gaps = 34/409 (8%)

Query: 144 DYGLKS----SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           DY ++S    + + CN+++   V+  + +    +Y++M+ RRI LN+ SFN ++   C  
Sbjct: 95  DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------GKMYKADAVFKDMVE 252
            KL+ +      +  LG  P VVT+N L+ G C +  I       G M +  ++F  MVE
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVE 214

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P  +TFNTLI+G C +  +  A  +  +M   G+   VVTY +++NG+C  G    
Sbjct: 215 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 274

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ L  +M  + +KP+VV  +A+I+  CK      A+ LF ++ E+G++P+V TYN +ID
Sbjct: 275 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 334

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +C  GR  DA  +   M++R + PDV T+N LI+   +EG +     + +E+++  +  
Sbjct: 335 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 394

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             VTYN ++   CK  +   A  + D M         P++VT+N +I  +C+  ++++  
Sbjct: 395 DTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDVYCRAKRVDEGM 447

Query: 493 GLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
            LL E+  +GL+ N TTY                Q + +EM+  G  PD
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 496



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 223/420 (53%), Gaps = 45/420 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + GL   V++ N L+  L  EG+  +   +  +M  + + +++ ++  ++NG+CK
Sbjct: 209 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 268

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--VFKDMVENGIL 256
            G    A +++  M+   + P VV Y+ +ID  CK G     + +DA  +F +M+E GI 
Sbjct: 269 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG-----HHSDAQYLFSEMLEKGIA 323

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  T+N +IDGFC     S A ++  +M    I   V+T+N+LI+    +GKL EA  L
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM+   + P+ VT N++I GFCK    + A+ +FD ++    SP V+T+NT+ID YC+
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 439

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             R+++   +   +  RG++ + +TYN LI G     N+   +++  E++++G+    +T
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEK---------------------EKKW------ 469
            NIL+   C++ K ++A+ L  E+ +M K                     ++ W      
Sbjct: 500 CNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558

Query: 470 ------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                 P++ TYNV+I GFC K  + DAN L +++ + G  P+ +TY  +    ++ G I
Sbjct: 559 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 618



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G   D +Y++ EM  + I  N+ ++N +++G C  G+ + A 
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P V+T+N LI    K+G   K+++A+ +  +M+   I P+ VT+N++I
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFCK      A  +F+ M S      VVT+N++I+  C   ++DE + L  E+   GL 
Sbjct: 404 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N  T N LI+GFC+   +  A+ LF ++   G+ P  IT N L+  +C+  ++E+A  +
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 519

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +    +  D   YN +I G+ +   V+   ++   L  +G+   + TYN+++   C 
Sbjct: 520 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC- 578

Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               K A+S  + +F KM+     P+  TYN LI+G  + G+++ +  L++E+   G   
Sbjct: 579 ---GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 635

Query: 506 NQTTYQIVRE 515
           +  T ++V +
Sbjct: 636 DAFTIKMVAD 645



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 176/331 (53%), Gaps = 18/331 (5%)

Query: 135 GFEAFKRAGDYG----------LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           GF +F R  D            +   VL+ N L+ A VKEGK  + E +  EM  R I  
Sbjct: 335 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 394

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N ++ G CK  + + A    + M  L  SP VVT+N +ID YC+   + +  +  
Sbjct: 395 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ-- 448

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + +++   G++ N  T+NTLI GFC+ +N++AA  +F+EM SHG+    +T N L+ G 
Sbjct: 449 -LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + KL+EA+ L + +  S +  + V  N +I+G CK   V++A  LF  +   G+ P V
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYN +I  +C +  + DA  + + M D G  PD STYN LI G  + G ++    +++E
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           + +NG      T   +V  L  DG+  K+ S
Sbjct: 628 MRSNGFSGDAFTIK-MVADLITDGRLDKSFS 657



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 153/290 (52%), Gaps = 15/290 (5%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DA+  F  MV +      V  N +I  F +      A+ ++ +M    I   + ++N LI
Sbjct: 89  DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV----------L 351
              C   KL  +++   ++   G +P+VVT N L++G C +  + +A            L
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSL 208

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD + E GL+P VIT+NTLI+  C EGR+ +A A+ N M+ +G+  DV TY  ++ G+ +
Sbjct: 209 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 268

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G+ +   N+++++    ++  +V Y+ ++  LCKDG    A  L  EM    ++   PN
Sbjct: 269 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML---EKGIAPN 325

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + TYN +I GFC  G+  DA  LL +++E+ + P+  T+  +    +++G
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 375



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 64/278 (23%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A+   D M+ S      V  N +I  F +    + A  L+  +  + +  ++ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST---------------------------- 401
           LI  +C   ++  + +    +   G  PDV T                            
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 402 -----------------YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                            +N LI GL  EG V     ++N++V  G+   +VTY  +V  +
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +K A++LL    KME+    P++V Y+ +I   C+ G   DA  L +E+LEKG+ 
Sbjct: 267 CKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDI 526
           PN  TY                Q +  +M+E+   PD+
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 361



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+ F +N K      +F  +      L  +++  ++++    K  K    ++ F     
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G++  V + N ++     +    D   ++ +MK    E +  ++N ++ G  KAG+++K
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620

Query: 205 ASDIMEDMKSLGVSPKVVTYNILID 229
           + +++ +M+S G S    T  ++ D
Sbjct: 621 SIELISEMRSNGFSGDAFTIKMVAD 645


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 205/389 (52%), Gaps = 11/389 (2%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY +        + F R G++G K SV   N +L AL+ E KF+ +  +Y  MKR  IEL
Sbjct: 117 AYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIEL 176

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ ++N +L  LCK  +++ A  ++ +M   G  P  V+Y  ++   C+ G + +  +  
Sbjct: 177 NVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELS 236

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              K  V          +N LI+GFC++  +    ++F EM   GI   V+TY+++IN L
Sbjct: 237 MRIKSFVP--------VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTL 288

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G ++ A+A+  +M   G  PNV T  +L+ G+     + +A  L++ + ++G  P+ 
Sbjct: 289 SEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNT 348

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           + YNTLI   C  G+M +A ++   M   GV P+ +TY+ LI G ++ G++ G   I N+
Sbjct: 349 VAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++ NG    +V Y  +V  LC++     A+ L++ M         PN +T+N  IKG C 
Sbjct: 409 MITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP---PNTITFNTFIKGLCC 465

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            GK E A  +LN++ + G  PN TTY  V
Sbjct: 466 SGKTEWAMKVLNQMRQYGCAPNVTTYNEV 494



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 202/403 (50%), Gaps = 5/403 (1%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           + + L+  + +  K    FE F      G+   V++ + ++  L + G  E    V  +M
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             R    N+ +F  ++ G    G+L +A D+   M   G  P  V YN LI G C     
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCS---Y 361

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GKM +A +V + M  NG+ PNE T++TLIDGF K  ++  A +++ +M ++G    VV Y
Sbjct: 362 GKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVY 421

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
             +++ LC +   + A+ L + M      PN +T N  I G C     E A  + + + +
Sbjct: 422 TCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQ 481

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G +P+V TYN ++D      R  +A  +   + +  +  ++ TYN +++G    G  +G
Sbjct: 482 YGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKG 541

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I  +L+  G +   +TYN ++ A CK G+ K A+ L+D + K  K + +P++ TY  
Sbjct: 542 ALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTK--KGEGYPDVFTYTS 599

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           L+ G C    +++A   L++++ +G+ PN+ T+  +   +  K
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSK 642



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 191/378 (50%), Gaps = 12/378 (3%)

Query: 134 LGFEAFKR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           L    FK  A     K + L+   +++ L  E   + ++Y+ + MK   I  N D F  V
Sbjct: 55  LALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIV 114

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +N   +AG   +A      +   G  P V  YN ++D    +    K    + ++ +M  
Sbjct: 115 INAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSE---NKFQMINGIYNNMKR 171

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +GI  N  T+N L+   CK++ + AA K+  EM   G     V+Y ++++ +C  GK++E
Sbjct: 172 DGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEE 231

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L     +  +K  V   NALINGFC++  +E+   LF++++ +G+ P VITY+T+I+
Sbjct: 232 AREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVIN 286

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              + G +E A A+   M  RG  P+V T+  L+ G    G +    ++ N ++  G   
Sbjct: 287 TLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEP 346

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             V YN L+  LC  GK  +AVS+     KME+   +PN  TY+ LI GF + G L  A+
Sbjct: 347 NTVAYNTLIHGLCSYGKMVEAVSVSQ---KMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 493 GLLNELLEKGLIPNQTTY 510
            + N+++  G +PN   Y
Sbjct: 404 EIWNKMITNGCLPNVVVY 421



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 172/375 (45%), Gaps = 28/375 (7%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           + ++L      +++     F+     Y  M KR   E ++D   ++L             
Sbjct: 50  EPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLL------------- 96

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              + MK  G+S     + I+I+ Y ++ G+ +  +A   F  + E G  P+   +N ++
Sbjct: 97  ---QLMKLEGISCNEDLFVIVINAY-RRAGLAE--QALKTFYRIGEFGCKPSVKIYNHVL 150

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D    +        ++  M   GI   V TYN L+  LC + ++D A  L  EM   G  
Sbjct: 151 DALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCI 210

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ V+   +++  C+   VE+AR L        +   V  YN LI+ +C+E +ME+ F +
Sbjct: 211 PDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFEL 265

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            N M   G+ PDV TY+ +I  LS  GNVE    ++ ++   G    + T+  L+     
Sbjct: 266 FNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFM 325

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+  +A+ L + M +   E   PN V YN LI G C  GK+ +A  +  ++   G+ PN
Sbjct: 326 GGRLCEALDLWNRMIQ---EGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPN 382

Query: 507 QTTYQIVREEMMEKG 521
           +TTY  + +   + G
Sbjct: 383 ETTYSTLIDGFAKAG 397



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 157/344 (45%), Gaps = 39/344 (11%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM  Y    +     + + R    G + + ++ N L+  L   GK  +   V ++M+R  
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  N  +++ +++G  KAG L  AS+I   M + G  P VV Y  ++D  C+        
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNH-- 436

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  + ++M      PN +TFNT I G C       AMKV  +M  +G A  V TYN ++
Sbjct: 437 -ALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GL    +  EA+ +  E+    +K N+VT N +++GFC   + + A  +   +   G  
Sbjct: 496 DGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTK 555

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAM----------------------------------- 386
           P  ITYNT+I AYCK+G ++ A  +                                   
Sbjct: 556 PDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVV 615

Query: 387 -RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
             + M++ G+ P+ +T+N L+ GL  +    G  +I++ ++ NG
Sbjct: 616 HLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILANG 659



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 46/307 (14%)

Query: 61  HSLLLTGRLLHSLVVAKK------YPKIRSFLHM---FVKNGKFTSVSTIFHAL------ 105
           H L   G+++ ++ V++K      +P   ++  +   F K G     S I++ +      
Sbjct: 356 HGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 106 -----STC-SDSLCRNSIIIDMLML-----------------AYVKNM----KPHLGFEA 138
                 TC  D LCRNS+    L L                  ++K +    K     + 
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
             +   YG   +V + N++L  L    +  +   +  E++   I+ NL ++N +L+G C 
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI-LP 257
           AG    A  I   +   G  P  +TYN +I  YCK+   G++  A  +   + + G   P
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQ---GEVKTAIQLVDRLTKKGEGYP 592

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T+ +L+ G C    +  A+   ++M + GI     T+N+L+ GL         + + 
Sbjct: 593 DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIV 652

Query: 318 DEMMASG 324
           D ++A+G
Sbjct: 653 DNILANG 659



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 7/203 (3%)

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           ++  K   +T   +I     ++ ++  + L   +  +G+S +   +  +I+AY + G  E
Sbjct: 66  SNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAE 125

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A      + + G  P V  YN ++  L  E   + +  I N +  +G+   + TYN+L+
Sbjct: 126 QALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLL 185

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            ALCK+ +   A  LL EM     +   P+ V+Y  ++   C+ GK+E+A  L   +  K
Sbjct: 186 KALCKNDRVDAARKLLAEM---SYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIK 240

Query: 502 GLIP--NQTTYQIVREEMMEKGF 522
             +P  N       RE  ME+ F
Sbjct: 241 SFVPVYNALINGFCREHKMEEVF 263


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 205/360 (56%), Gaps = 6/360 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ N L+ A  +EG  E+   +   M  + ++ +L ++N ++NGLCK G+  +A  I+ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M ++G+SP   TYN L+   C++       +A  +F +M+  G++P+ V+F++L+  F 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFS---EAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++ ++  A+  F +M   G+    V Y  L++G C +G + EA+ +RDEM+  G   +V+
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N ++NG CK+K++  A  LFD++ E+G  P   T+ TLI  +C++G M  A ++  +M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             R + PD+  YN LI G  + G +E    + + +++  +    +TY IL+ A C  G  
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  L D M  +EK  K P +VT N +IKG+C+ G    A+  L  ++ KG+ P+  +Y
Sbjct: 298 SEAFRLWDVM--IEKGIK-PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 180/326 (55%), Gaps = 6/326 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++   C+ G L +A +IM  M   G+ P + TYN +I+G CKKG   +  +A  + 
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKG---RYARAKGIL 59

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M+  G+ P+  T+NTL+   C+ +N S A ++F EM   G+   +V+++SL+     +
Sbjct: 60  IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRN 119

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
             LD+A+    +M   GL P+ V    L++G+C+   + +A  + D++ EQG    VI Y
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT+++  CKE  + DA  + + M++RG LPD  T+  LI G  ++GN+    ++   +  
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             ++  +V YN L+   CK G+ +KA  L D M      K +PN +TY +LI  +C  G 
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS---RKIFPNHITYGILINAYCSVGH 296

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIV 513
           + +A  L + ++EKG+ P   T   V
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTV 322



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 162/293 (55%), Gaps = 6/293 (2%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           +VTYN LI  YC++G + + ++   +   M + G+ P+  T+N +I+G CK    + A  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFE---IMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKG 57

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +  EM + G++    TYN+L+   C      EA  +  EM+  G+ P++V+ ++L+  F 
Sbjct: 58  ILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           + + +++A V F D+ + GL P  + Y  L+  YC+ G M +A  +R+ ML++G + DV 
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            YN ++ GL +E  +     + +E+V  G      T+  L+   C+DG   KA+SL    
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG-- 235

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             M +    P+IV YN LI GFC+ G++E A+ L + ++ + + PN  TY I+
Sbjct: 236 -TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 287



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 112 LCRNSIIIDM-----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           + R  ++ D+     LM  + +N         F+    +GL    +    L+    + G 
Sbjct: 97  MLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 156

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             +   +  EM  +   L++ ++N +LNGLCK   L  A  + ++M   G  P   T+  
Sbjct: 157 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 216

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI G+C+ G    M KA ++F  M +  I P+ V +NTLIDGFCK   +  A ++++ M 
Sbjct: 217 LIHGHCQDG---NMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 273

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S  I    +TY  LIN  C  G + EA  L D M+  G+KP +VT N +I G+C+     
Sbjct: 274 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 333

Query: 347 KARVLFDDISEQGLSPSVITYNTLID 372
           KA      +  +G++P  I+YNTLI+
Sbjct: 334 KADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 26/224 (11%)

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT N LI  +C++ L+E+A  + + ++++GL PS+ TYN +I+  CK+GR   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML+ G+ PD +TYN L+    R  N    + I  E++  G+   LV+++ L+    ++ 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
              +A+    +M   +K    P+ V Y VL+ G+C+ G + +A  + +E+LE+G + +  
Sbjct: 121 HLDQALVYFRDM---KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 509 TYQIVR----------------EEMMEKGFIPD-------IEGH 529
            Y  +                 +EM+E+G +PD       I GH
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 221


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 231/476 (48%), Gaps = 87/476 (18%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF     +G+   V  CN++LR L    +++D+  V+ EM +  IE ++ ++N +L
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVS--PKVVTYNILIDGYCKKGGI-------------- 237
           +   K G+ +K + ++++M++ G    P  VT+N++I G  +KG +              
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G + KAD +  +M   GI+P  VT+N +I G  +   + AA  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM + G+   V+TYNSL+NG C  G L EA+ L  ++  +GL P V+T N LI+G+C
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424

Query: 341 -----------KKKLVEK------------------------ARVLFDDISEQGLSPSVI 365
                      K+++VE+                        AR  FD++  +GL P   
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNT I A    G +  AF +R  M+  G+  D  TYN LI GL + GN+   +++  ++
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V+NG++   +TY  L+ A C+ G  ++A     +M     +   P+ VTY V I  +C++
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI---SDGLAPSAVTYTVFIHAYCRR 601

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           G L  A G   ++LE+G+ PN+ TY ++                  EM+E+G +P+
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPN 657



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 221/427 (51%), Gaps = 21/427 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKP-HLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           LS  + S   N +I  +L   +VK      L  E      + G+  +V++ N ++  L++
Sbjct: 302 LSKKASSFTYNPLITGLLAKGFVKKADDLQLEME------NEGIMPTVVTYNAMIHGLLQ 355

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+ E  +  + EM+   ++ ++ ++N +LNG CKAG L +A  +  D++  G++P V+T
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YNILIDGYC+   +G + +A  + ++MVE G LP+  T+  L+ G     +++ A + F+
Sbjct: 416 YNILIDGYCR---LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFD 472

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM S G+      YN+ I      G + +A  LR+ MM  G+  + VT N LI+G CK  
Sbjct: 473 EMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTG 532

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +  A+ L   +   GL P  ITY  LI A+C+ G + +A      M+  G+ P   TY 
Sbjct: 533 NLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYT 592

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
             I    R GN+        +++  G+    +TYN+L+ ALC+ G+++ A     EM   
Sbjct: 593 VFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEML-- 650

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            +    PN  TY +LI G C++G  EDA     E+ + G+ P+  T++      + KGF 
Sbjct: 651 -ERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKA-----LFKGF- 703

Query: 524 PDIEGHM 530
              EGHM
Sbjct: 704 --DEGHM 708


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 209/376 (55%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + + ++ N L+  L    K  +   +   M  +  + +L ++  V+NGLCK G  + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  M+   + P V+ YN +IDG CK      M  A  +FK+M   GI PN VT+++L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCK---YKHMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   V T+++LI+    +GKL EA  L DEM+   +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++VT ++LINGFC    +++A+ +F+ +  +   P V+TYNTLI  +CK  R+E+   
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ +  TYN LI GL + G+ +  + I  E+V++G+   ++TYN L+  LC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK +KA+ + +    +++ K  P I TYN++I+G C+ GK+ED   L   L  KG+ P
Sbjct: 478 KNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534

Query: 506 NQTTYQIVREEMMEKG 521
           +   Y  +      KG
Sbjct: 535 DVVAYNTMISGFCRKG 550



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 206/373 (55%), Gaps = 8/373 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  KF+ V  + ++M+   I  N  +++ ++N  C+  +L  A  ++
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I    +A A+   M   G  PN VTFNTLI G 
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRIS---EAVALVDQMFVTGYQPNTVTFNTLIHGL 196

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S AM + + M + G    +VTY  ++NGLC  G  D A  L ++M    L+P V
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +  N +I+G CK K ++ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + 
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++R + PDV T++ LI    +EG +     + +E+V   +   +VTY+ L+   C   +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A     +MF+ M  +  +P++VTYN LIKGFC+  ++E+   +  E+ ++GL+ N  
Sbjct: 377 LDEA----KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432

Query: 509 TYQIVREEMMEKG 521
           TY I+ + + + G
Sbjct: 433 TYNILIQGLFQAG 445



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 238/473 (50%), Gaps = 15/473 (3%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSL 112
           EL+   ++ L G ++ S    + +P I  F   L    K  KF  V ++   +      +
Sbjct: 59  ELKLDDAVALFGEMVKS----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--I 112

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
             N     +L+  + +  +  L      +    G + ++++ + LL       +  +   
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           +  +M     + N  +FN +++GL    K ++A  +++ M + G  P +VTY ++++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K+G     +    +   M +  + P  + +NT+IDG CK +++  A+ +F+EM + GI  
Sbjct: 233 KRGDTDLAFN---LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VVTY+SLI+ LC  G+  +A  L  +M+   + P+V T +ALI+ F K+  + +A  L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D++ ++ + PS++TY++LI+ +C   R+++A  M   M+ +   PDV TYN LI G  + 
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             VE    +  E+   G+    VTYNIL+  L + G    A  +  EM     +   PNI
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS---DGVPPNI 466

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +TYN L+ G C+ GKLE A  +   L    + P   TY I+ E M + G + D
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 182/322 (56%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK     G++ +V++ + L+  L   G++ D   +  +M  R+I  ++ +F+ +++   K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P +VTY+ LI+G+C      ++ +A  +F+ MV     P+
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD---RLDEAKQMFEFMVSKHCFPD 395

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+NTLI GFCK + +   M+VF EM   G+    VTYN LI GL   G  D A  +  
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM++ G+ PN++T N L++G CK   +EKA V+F+ +    + P++ TYN +I+  CK G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  ++  +GV PDV  YN +I+G  R+G+ E    +  E+  +G       YN
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG  + +  L+ EM
Sbjct: 576 TLIRARLRDGDREASAELIKEM 597



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 206/380 (54%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F    +     L+  VL  N ++  L K    +D   ++KEM+ + I  N+ +++ ++
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           + LC  G+ + AS ++ DM    ++P V T++ LID + K+   GK+ +A+ ++ +MV+ 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE---GKLVEAEKLYDEMVKR 355

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+ VT+++LI+GFC  + +  A ++FE M S      VVTYN+LI G C   +++E 
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +  EM   GL  N VT N LI G  +    + A+ +F ++   G+ P+++TYNTL+D 
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G++E A  +   +    + P + TYN +I G+ + G VE   ++   L   G++  
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +V YN ++   C+ G  ++A +L  E   M+++   PN   YN LI+   + G  E +  
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKE---MKEDGTLPNSGCYNTLIRARLRDGDREASAE 592

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L+ E+   G   + +T  +V
Sbjct: 593 LIKEMRSCGFAGDASTIGLV 612



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 182/312 (58%), Gaps = 6/312 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V + + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++ +   VF++M + G++ N VT+N LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A ++F+EM S G+   ++TYN+L++GLC +GKL++A+ + + +  S ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P + T N +I G CK   VE    LF ++S +G+ P V+ YNT+I  +C++G  E+A A+
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+   YN LI    R+G+ E    ++ E+ + G  AG  +   LV  +  
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLH 617

Query: 447 DGKSKKAVSLLD 458
           DG+  K  S LD
Sbjct: 618 DGRLDK--SFLD 627



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A A+F +MV++   P+ + F+ L+    K       + + E+M + GI     TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LIN  C   +L  A+A+  +MM  G +PN+VT ++L+NG+C  K + +A  L D +   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+ +T+NTLI       +  +A A+ + M+ +G  PD+ TY  ++ GL + G+ +  
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N++N++    +  G++ YN ++  LCK      A++L  EM   E +   PN+VTY+ L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKGIRPNVVTYSSL 297

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I   C  G+  DA+ LL++++E+ + P+  T+  + +  +++G + + E
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 239/471 (50%), Gaps = 34/471 (7%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           LR    ++  G++L SLV  K YP + S                        S  +    
Sbjct: 4   LRHIPPIIEFGKILGSLVKMKHYPTVISL-----------------------SKQMEAKG 40

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFK-----RAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           I+ D++ L+ + N   HLG  AF      +    G + + +  N L++ L  +G+ +   
Sbjct: 41  IVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL 100

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           + + ++  +  +++  S+  +LNGLCK G+   A  ++  ++     P VV Y+ +IDG 
Sbjct: 101 HFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGL 160

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   + + Y    ++ +M   GI P+ +T+ TLI GFC    +  A  +  EM    I 
Sbjct: 161 CKDKLVDEAYD---LYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + TYN+LI+ LC +GK+ E+  L   M   G+KP+VV  + L++G+C    V+KA+ +
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI 277

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + + G++P V +YN +I+  CK  R+++A  +   ML + ++PD  TY+ LI GL +
Sbjct: 278 FLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCK 337

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G +  + ++  E+ + G  A LVTYN L+  LCK+    KA++L     KM++    PN
Sbjct: 338 LGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF---MKMKERGIQPN 394

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             TY  LI G C+ G+L+    L   LL KG   +  TY ++   + ++G 
Sbjct: 395 KYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 193/356 (54%), Gaps = 17/356 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  D LC++ ++ +               ++ +      G+   V++   L+      G
Sbjct: 154 STIIDGLCKDKLVDE--------------AYDLYSEMNARGIFPDVITYTTLICGFCLAG 199

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +  +   +  EM  + I  N+ ++N +++ LCK GK+ ++ +++  M   GV P VV Y+
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYS 259

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           IL+DGYC    +G++ KA  +F  MV+ G+ P+  ++N +I+G CK + +  AM +  EM
Sbjct: 260 ILMDGYCL---VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREM 316

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +    VTY+SLI+GLC  G++   + L  EM   G   N+VT N+L++G CK + +
Sbjct: 317 LHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNL 376

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA  LF  + E+G+ P+  TY  LID  CK GR++   A+   +L +G   DV TY  +
Sbjct: 377 DKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM 436

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           I+GL +EG  +    + +++ +NG     VT+ I++ +L +  ++ KA  LL EM 
Sbjct: 437 ISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMI 492



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 200/362 (55%), Gaps = 6/362 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   +  V+  + ++  L K+   ++   +Y EM  R I  ++ ++  ++ G C AG+L 
Sbjct: 143 DRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLM 202

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++ +M    ++P + TYN LID  CK+   GK+ ++  +   M + G+ P+ V ++
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKE---GKVKESKNLLAVMTKKGVKPDVVIYS 259

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+DG+C    +  A ++F  M   G+   V +YN +INGLC   ++DEA+ L  EM+  
Sbjct: 260 ILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + P+ VT ++LI+G CK   +     L  ++  +G   +++TYN+L+D  CK   ++ A
Sbjct: 320 NMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKA 379

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            A+   M +RG+ P+  TY  LI GL + G ++  + +   L+  G    + TY +++  
Sbjct: 380 IALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG 439

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK+G   +A+++     KME     PN VT+ ++I+   +K + + A  LL+E++ KGL
Sbjct: 440 LCKEGMFDEALAMKS---KMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496

Query: 504 IP 505
           +P
Sbjct: 497 LP 498



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 172/298 (57%), Gaps = 6/298 (2%)

Query: 136 FEAFKRAGDYGLKS---SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            EAF    +  LK+   ++ + N L+  L KEGK ++ + +   M ++ ++ ++  ++ +
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++G C  G++ KA  I   M   GV+P V +YNI+I+G CK     ++ +A  + ++M+ 
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK---RVDEAMNLLREMLH 318

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             ++P+ VT+++LIDG CK   I+  + + +EM   G  A +VTYNSL++GLC +  LD+
Sbjct: 319 KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDK 378

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+AL  +M   G++PN  T  ALI+G CK   ++K + LF  +  +G    V TY  +I 
Sbjct: 379 AIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
             CKEG  ++A AM++ M D G +P+  T+  +I  L  +   +    +++E++  G+
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 146/294 (49%), Gaps = 21/294 (7%)

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P  + F  ++    K ++    + + ++M + GI   +VT + LIN  C  G++  + +
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  +++  G +PN +  N L+ G C K  V+K+    D +  QG     ++Y  L++  C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G    A  +  ++ DR   PDV  Y+ +I GL ++  V+   ++ +E+   G+   ++
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+   C  G+  +A  LL+EM     +   PNI TYN LI   C++GK++++  LL
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMI---LKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 496 NELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNI 533
             + +KG+ P+   Y I+ +                 M++ G  PD+  + YNI
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDV--YSYNI 295


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 230/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 69  RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJ---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +     LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGD-------LDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 53/264 (20%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y ++I+ LC    L EA                    +LI     +K    A  +F  I 
Sbjct: 22  YCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAIX 62

Query: 357 EQ-GLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           E  G   S +  ++ LI AY + G + DA        +        T   ++  L +   
Sbjct: 63  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PN 471
            + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAI------TKWGLRPS 176

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
           +V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + +
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 516 EMMEKGFIPD-------IEGHMYN 532
           EM+ KG +P+       I+GH  N
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKN 260


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 210/403 (52%), Gaps = 35/403 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N ++    KEG       ++KEM +R I  +  +++ V++ LCKA  ++KA   + 
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLR 278

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + GV P   TYN LI GY      G+  +A  VFK+M    ILP+ VTFN L+   C
Sbjct: 279 QMVNKGVLPNNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLC 335

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A  VF+ M   G    V +YN ++NG    G L +   L D M+  G+ P + 
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 395

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI  +    +++KA ++F+++ + G+ P+V+TY T+I A C+ G+M+DA    N M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D+GV PD   Y+CLI G    G++   + +++E++NNGM   +V ++ ++  LCK G+ 
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 451 KKAVSLLDEMF----------------------KMEKEKKW----------PNIVTYNVL 478
             A ++ D                         KMEK  +           PN V Y  L
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + G+C+ G++++   L  E+L+KG+ P+   Y I+ + + E G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 232/476 (48%), Gaps = 23/476 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNG----KFTSVSTIFHALSTCS--------DSLCRNS 116
           ++H+L  A+   K  +FL   V  G     +T  + I+   ST            + R S
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319

Query: 117 IIID-----MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           I+ D     MLM +  K  K     + F      G    V S N +L     +G   D+ 
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++  M    I   + +FN ++      G L+KA  I  +M+  GV P V+TY  +I   
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   IGKM  A   F  M++ G+ P++  ++ LI GFC   ++  A ++  E+ ++G+ 
Sbjct: 440 CR---IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +V ++S+IN LC  G++ +A  + D  +  GL P  V  + L++G+C    +EKA  +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD +   G+ P+ + Y TL++ YCK GR+++  ++   ML +G+ P    YN +I GL  
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G     +   +E+  +G+     TY+I++  L K+    +A+ L  E+  M  +    +
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI---D 673

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I+T N +I G  Q  ++E+A  L   +   GL+P   TY I+   ++++G + + E
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 208/388 (53%), Gaps = 14/388 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +++
Sbjct: 87  PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDI 146

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 203

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  P+ V +NT+IDGF K+ +++ A  +F+EM   GI    VTY+S+++ 
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +D+A A   +M+  G+ PN  T N LI G+      ++A  +F ++  Q + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+T+N L+ + CK G++++A  + ++M  +G  PDV +YN ++ G + +G +  + ++ +
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+   + T+N+L+ A    G   KA+ + +E   M      PN++TY  +I   C
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE---MRDHGVKPNVLTYTTVIAALC 440

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + GK++DA    N+++++G+ P++  Y 
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYH 468



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 202/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K +VL+   ++ AL + GK +D    + +M  + +  +  +++ ++ G C 
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V ++ +I+  CK   +G++  A  +F   V  G+ P 
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPT 533

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V ++ L+DG+C    +  A++VF+ M S GI    V Y +L+NG C  G++DE ++L  
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  N +I+G  +      A+V F +++E G++ +  TY+ ++    K  
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  D+ T N +IAG+ +   VE  +++   +  +G+   +VTY+
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     P+    N +++   +K ++  A   L++
Sbjct: 714 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 38/367 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +  D G+     + + L++     G     + +  E+    + L++  F+ ++N
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G++  A +I +   ++G+ P  V Y++L+DGYC    +GKM KA  VF  MV  G
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL---VGKMEKALRVFDAMVSAG 564

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK----- 309
           I PN+V + TL++G+CK   I   + +F EM   GI    + YN +I+GL   G+     
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 310 ------------------------------LDEAVALRDEMMASGLKPNVVTSNALINGF 339
                                          DEA+ L  E+ A  +K +++T N +I G 
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            + + VE+A+ LF  IS  GL P V+TY+ +I    KEG +E+A  M +SM + G  PD 
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
              N ++  L ++  +      ++++         +T  +LV      G  ++ +  L  
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804

Query: 460 MFKMEKE 466
            +    E
Sbjct: 805 KYHFLAE 811



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGV 418
           LSP+  TY  L+D   +  R E A A    +L  G+  D+   N L+ G        E +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTY 475
             +++     G    + +Y+IL+ +LC  GKS +A    D++ +M  E      P++V Y
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA----DDLLRMMAEGGAVCSPDVVAY 222

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           N +I GF ++G +  A  L  E++++G+ P+  TY  V
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 243/489 (49%), Gaps = 49/489 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF--LHMFVKNGKFTSVSTIFHALST-----CSDSLCRNSIIID 120
           +L   L+   +   +R+F  L   V     +S S    +L T     CS  +  N+    
Sbjct: 35  KLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYS 94

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKR 179
           +L+  + +  +   GF AF      G + +V+  +QLL+ L    +  E  + +   M  
Sbjct: 95  ILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSE 154

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                ++ ++N V+NG  + G++ KA ++  +M   G+ P VVTY  +IDG CK   +  
Sbjct: 155 FGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVD- 213

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
             +A  VF+ M++ G+ P+  T+N LI G+         +++ EEM +HG+    +TY  
Sbjct: 214 --RAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING--------------------- 338
           L++ LC +G+  EA    D M   G+KP+V     L++G                     
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 339 -----------FC---KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
                      FC   KK ++E+A  +F+ + +QGLSP V+++  LIDA CK GR++DA 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              N M++ GV P++  ++ L+ GL   G  E    +  E+++ G+    V +N L+  L
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNL 451

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C +G+  +A  L+D M ++      PN+++YN L+ G C  G++++A  LL+ ++  GL 
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVR---PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK 508

Query: 505 PNQTTYQIV 513
           PN+ TY I+
Sbjct: 509 PNEFTYTIL 517



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 205/388 (52%), Gaps = 8/388 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++  D G+K    + N L+   +  GK+++V  + +EM    +E +  ++  +L+ LCK
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILP 257
            G+  +A    + M   G+ P V  Y IL+ GY  KG + +M+     F D MV NG+ P
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHS----FLDLMVGNGVSP 334

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N   FN +   + K   I  AM +F +M   G++  VV++ +LI+ LC  G++D+AV   
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           ++M+  G+ PN+   ++L+ G C     EKA  LF ++ +QG+    + +NTL+   C E
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           GR+ +A  + + M+  GV P+V +YN L+AG    G ++    +++ +V+NG++    TY
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTY 514

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
            IL+   CK  +   A SL  EM     +   P + TYN ++ G  Q G+  +AN L   
Sbjct: 515 TILLRGYCKARRVDDAYSLFREML---MKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++      +  TY I+   + +  F+ +
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDE 599



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 240/486 (49%), Gaps = 47/486 (9%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST-----------------CSDSLCRNS-IIIDMLMLAY 126
            +H ++  GK+  V  +   +ST                 C +  CR + +  D +   +
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM---F 293

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV-------------------KEGKF 167
            K +KP +   A    G Y  K ++   +  L  +V                   K+   
Sbjct: 294 RKGIKPDVAIYAILLHG-YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMI 352

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E+  +++ +M+++ +  ++ SF  +++ LCK G+++ A      M + GV+P +  ++ L
Sbjct: 353 EEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSL 412

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           + G C    +GK  KA+ +F ++++ GI  + V FNTL+   C +  +  A ++ + M  
Sbjct: 413 VYGLCT---VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIR 469

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   V++YN+L+ G C+ G++DEA  L D M+++GLKPN  T   L+ G+CK + V+ 
Sbjct: 470 VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDD 529

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF ++  +G++P V TYNT++    + GR  +A  +  +M++     D+ TYN ++ 
Sbjct: 530 AYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILN 589

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL +   V+    +   L +   +   VT+NI++GAL K G+ + A+ L      +    
Sbjct: 590 GLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFA---TISAYG 646

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             P++VTY ++ +   ++G L + +GL + + + G  PN      +   ++ +G I    
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAG 706

Query: 528 GHMYNI 533
            ++Y +
Sbjct: 707 VYLYKL 712



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 171/335 (51%), Gaps = 8/335 (2%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE---NGILPN 258
           L++A  + +++        V  +N L+    + G      +  ++F  M     + + PN
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-ALR 317
             T++ LI  FC+   +      F  +   G    V+  + L+ GLC   ++DEA   L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             M   G  P+VV  N +INGF ++  VEKA  LF ++ +QG+ P+V+TY T+ID  CK 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             ++ A  +   M+DRGV PD  TYNCLI G    G  + V  ++ E+  +G+    +TY
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
            +L+  LCK+G+ ++A    D MF   ++   P++  Y +L+ G+  KG L + +  L+ 
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMF---RKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
           ++  G+ PN+  + I+     +K  I +   H++N
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAM-HIFN 360



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 163/417 (39%), Gaps = 91/417 (21%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH         ++ SFL + V NG                  +  N  I +++  AY K
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNG------------------VSPNRRIFNIMFCAYAK 348

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                     F +    GL   V+S   L+ AL K G+ +D    + +M    +  N+  
Sbjct: 349 KAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFV 408

Query: 189 FNFVLNGLCKAGKLNKASD-----------------------------IMED------MK 213
           F+ ++ GLC  GK  KA +                             +ME       M 
Sbjct: 409 FSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMI 468

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
            +GV P V++YN L+ G+C  G I +  K   +   MV NG+ PNE T+  L+ G+CK  
Sbjct: 469 RVGVRPNVISYNTLVAGHCLTGRIDEAAK---LLDVMVSNGLKPNEFTYTILLRGYCKAR 525

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSL--------------------------------- 300
            +  A  +F EM   G+   V TYN++                                 
Sbjct: 526 RVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYN 585

Query: 301 --INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
             +NGLC +  +DEA  +   + +   + + VT N +I    K    E A  LF  IS  
Sbjct: 586 IILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAY 645

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           GL P V+TY  + +   +EG + +   + ++M   G  P+    N L+  L   G++
Sbjct: 646 GLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 206/374 (55%), Gaps = 7/374 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           K  ++  N L+   V  G+ +D + V  +M     I  ++ ++N ++ G  K G +  A 
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +++ DM++ G  P V +Y IL+DG+CK G I + Y    V  +M  +G+ PN V FN LI
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN---VLNEMSADGLKPNTVGFNCLI 466

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             FCK+  I  A+++F EM   G    V T+NSLI+GLC   ++  A+ L  +M++ G+ 
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N VT N LIN F ++  +++AR L +++  QG     ITYN+LI   C+ G ++ A ++
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              ML  G  P   + N LI GL R G VE       E+V  G    +VT+N L+  LC+
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+ +  +++     K++ E   P+ VT+N L+   C+ G + DA  LL+E +E G +PN
Sbjct: 647 AGRIEDGLTMFR---KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703

Query: 507 QTTYQIVREEMMEK 520
             T+ I+ + ++ +
Sbjct: 704 HRTWSILLQSIIPQ 717



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 227/442 (51%), Gaps = 25/442 (5%)

Query: 99  STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH----LGFEAFKRAGD---------- 144
            T+ H+LS C+       ++ +M ++  V + +      LG   F R  +          
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G     ++   L+  L K G+ +  + ++  + +  I +    FN +++G    G+L+ 
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDD 371

Query: 205 ASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           A  ++ DM  S G+ P V TYN LI GY K+G +G    A  V  DM   G  PN  ++ 
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL---ALEVLHDMRNKGCKPNVYSYT 428

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+DGFCK   I  A  V  EM + G+    V +N LI+  C + ++ EAV +  EM   
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP+V T N+LI+G C+   ++ A  L  D+  +G+  + +TYNTLI+A+ + G +++A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + N M+ +G   D  TYN LI GL R G V+  R++  +++ +G     ++ NIL+  
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC+ G  ++AV    EM         P+IVT+N LI G C+ G++ED   +  +L  +G+
Sbjct: 609 LCRSGMVEEAVEFQKEMVL---RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665

Query: 504 IPNQTTYQIVREEMMEKGFIPD 525
            P+  T+  +   + + GF+ D
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYD 687



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 191/345 (55%), Gaps = 6/345 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG+   V + N L+    KEG       V  +M+ +  + N+ S+  +++G CK GK+++
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +++ +M + G+ P  V +N LI  +CK+    ++ +A  +F++M   G  P+  TFN+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEH---RIPEAVEIFREMPRKGCKPDVYTFNS 499

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G C+ + I  A+ +  +M S G+ A  VTYN+LIN     G++ EA  L +EM+  G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              + +T N+LI G C+   V+KAR LF+ +   G +PS I+ N LI+  C+ G +E+A 
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             +  M+ RG  PD+ T+N LI GL R G +E    +  +L   G+    VT+N L+  L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           CK G    A  LLDE     ++   PN  T+++L++    +  L+
Sbjct: 680 CKGGFVYDACLLLDEGI---EDGFVPNHRTWSILLQSIIPQETLD 721



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 11/382 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           Y  + +  S N +L  LV     +    V+ +M  R+I   L +F  V+   C   +++ 
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++ DM   G  P  V Y  LI    K     ++ +A  + ++M   G +P+  TFN 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSK---CNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I G CK + I+ A K+   M   G A   +TY  L+NGLC  G++D A     ++    
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRI 348

Query: 325 LKPNVVTSNALINGFCKKKLVEKAR-VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            KP +V  N LI+GF     ++ A+ VL D ++  G+ P V TYN+LI  Y KEG +  A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M ++G  P+V +Y  L+ G  + G ++   N++NE+  +G++   V +N L+ A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK+ +  +AV +  E   M ++   P++ T+N LI G C+  +++ A  LL +++ +G+
Sbjct: 469 FCKEHRIPEAVEIFRE---MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 504 IPNQTTYQIVREEMMEKGFIPD 525
           + N  TY  +    + +G I +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKE 547



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 191/412 (46%), Gaps = 48/412 (11%)

Query: 137 EAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           E F   G   G + S      L+  L   G+F+ ++ +  +MK   I      F  ++  
Sbjct: 96  ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155

Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDM 250
             KAG   + + +M +M+++    P   +YN    IL+ G C K        A  VF DM
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK-------VAANVFYDM 208

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           +   I P   TF  ++  FC    I +A+ +  +M  HG     V Y +LI+ L    ++
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY--- 367
           +EA+ L +EM   G  P+  T N +I G CK   + +A  + + +  +G +P  ITY   
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 368 ----------------------------NTLIDAYCKEGRMEDAFAMRNSML-DRGVLPD 398
                                       NTLI  +   GR++DA A+ + M+   G++PD
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V TYN LI G  +EG V     +++++ N G +  + +Y ILV   CK GK  +A ++L+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E   M  +   PN V +N LI  FC++ ++ +A  +  E+  KG  P+  T+
Sbjct: 449 E---MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 116/204 (56%), Gaps = 3/204 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ ++ ++ N L+ A ++ G+ ++   +  EM  +   L+  ++N ++ GLC+AG+++KA
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M   G +P  ++ NILI+G C+ G + +  +     K+MV  G  P+ VTFN+L
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ---KEMVLRGSTPDIVTFNSL 640

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C+   I   + +F ++ + GI    VT+N+L++ LC  G + +A  L DE +  G 
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700

Query: 326 KPNVVTSNALINGFCKKKLVEKAR 349
            PN  T + L+     ++ +++ R
Sbjct: 701 VPNHRTWSILLQSIIPQETLDRRR 724



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 274 NISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           N+S +M++F   GS  G       Y  LI  L  +G+      L  +M   G+       
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 333 NALINGFCKKKLV-EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            +++  + K     +  R++ +  +     P+  +YN +++        + A  +   ML
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R + P + T+  ++        ++   +++ ++  +G     V Y  L+ +L K  +  
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ LL+EMF M      P+  T+N +I G C+  ++ +A  ++N +L +G  P+  TY 
Sbjct: 270 EALQLLEEMFLM---GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326

Query: 512 IVREEMMEKGFIPDIEGHMYNI 533
            +   + + G +   +   Y I
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRI 348


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 251/536 (46%), Gaps = 45/536 (8%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
           + I  ++    W  L + D     L+  +      L L++  W  K+  L   H + L  
Sbjct: 21  KSIYNILTIDRWGSLNHMDYRQARLRPVHGK----LALKFLKWVVKQPGLDTDHIVQLFC 76

Query: 68  RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
              H LV A+ Y   R  L  + + +GK    S +F AL         N  + D+L+  Y
Sbjct: 77  ITTHILVRARMYDPARHILKELSLMSGK---SSFVFGALMATYRLCNSNPSVFDILIRVY 133

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++        E F+  G YG   SV +CN +L ++VK  +   V    KEM +R+I  ++
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDV 193

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------- 237
            +FN ++N LC  G   K+S +M+ M+  G +P +VTYN ++  YCKKG           
Sbjct: 194 ATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 238 -----------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
                                   +  K   + +DM +  I PNEVT+NTL++GF  +  
Sbjct: 254 MNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGK 313

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++  EM + G++   VT+N+LI+G   +G   EA+ +   M A GL    V+   
Sbjct: 314 VLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGV 373

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK    + AR  +  +   G+    ITY  +ID  CK G +++A  M N M   G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDG 433

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD+ TY+ LI G  R G ++  + I+  +   G+    + Y+ L+   C+ G  K+ +
Sbjct: 434 IDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETI 493

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            + + M     E   P+  T+NVL+   C+ GK+ +A   +  +   G++PN  ++
Sbjct: 494 RIYEAMI---LEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSF 546



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 189/353 (53%), Gaps = 6/353 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ + V + N L+  L +  +      + ++M++R I  N  ++N +LNG    GK+  A
Sbjct: 258 GVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIA 317

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M + G+SP  VT+N LIDG+  +G   +  K   +F  M   G++  EV++  L
Sbjct: 318 RQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALK---MFHMMEAKGLIGTEVSYGVL 374

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK+     A   +  M  +G+  G +TY  +I+GLC +G LDEAV + +EM   G+
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++VT +ALINGFC+   ++ A+ +   I   GLSP+ I Y+TLI   C+ G +++   
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR 494

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M+  G  PD  T+N L+  L + G V      M  + ++G+    V+++ L+    
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             G+  KA S+ DEM K+      P   TY  L+KG C+ G L  A   L  L
Sbjct: 555 SSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKGGHLIAAEKFLKSL 604



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 7/378 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++ N L+   + EG F++   ++  M+ + +     S+  +L+GLCK  + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDL 386

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A      MK  GV    +TY  +IDG CK G + +   A  +  +M ++GI P+ VT++ 
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE---AVVMLNEMSKDGIDPDIVTYSA 443

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFC+   +  A ++   +   G++   + Y++LI   C  G L E + + + M+  G
Sbjct: 444 LINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEG 503

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+  T N L+   CK   V +A      ++  G+ P+ ++++ LI+ Y   G    AF
Sbjct: 504 NTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAF 563

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++ + M   G  P   TY  L+ GL + G++      +  L N       V  N L+ A+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAM 623

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-L 503
           CK G   KAVSL  EM    +    P+  TY  LI G C+KGK   A     E   +G L
Sbjct: 624 CKSGNLDKAVSLFGEMV---QRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNL 680

Query: 504 IPNQTTYQIVREEMMEKG 521
           +PN+  Y    + M + G
Sbjct: 681 VPNKVMYTCFVDGMFKAG 698



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 197/392 (50%), Gaps = 24/392 (6%)

Query: 160  ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
             + K G+++   Y  ++M +  +  ++ + N +++G  + GK+ K  D++ +M +    P
Sbjct: 693  GMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGP 752

Query: 220  KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             + TYNIL+ GY K+  +   +    +++ M+ +GILP+++T  ++I G C+   +   +
Sbjct: 753  NLTTYNILLHGYSKRKHVSTSF---MLYRSMILSGILPDKLTCYSIILGICESNMLEIGL 809

Query: 280  KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            K+ +     G+     T+N LI+  C +G+++ A  + + M + G+  +  T +A+++  
Sbjct: 810  KILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVL 869

Query: 340  CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
             +    +++R++  ++S+QG+SP    Y  L++  C+ G ++ AF ++  M+   + P  
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 400  STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
               + ++  L++ G  +    ++  ++   +   + ++  L+   CK+G   +A+ L   
Sbjct: 930  VAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALEL--- 986

Query: 460  MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------- 511
               M       ++V+YNVLI G C KG +  A  L  E+   G + N TTY+        
Sbjct: 987  RVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILS 1046

Query: 512  ---------IVREEMMEKGFIPDIE-GHMYNI 533
                     I+ ++++ +GFI  +   HM N 
Sbjct: 1047 QGTEFSGTDIILKDLLARGFITAMSFNHMINF 1078



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 211/500 (42%), Gaps = 49/500 (9%)

Query: 66  TGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           T R+  ++++    P   +F   +    K GK          ++  SD +  N++  D L
Sbjct: 492 TIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMT--SDGILPNAVSFDCL 549

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  Y  + +    F  F      G   +  +   LL+ L K G     E   K ++    
Sbjct: 550 INGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPA 609

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG--IGKM 240
            ++    N ++  +CK+G L+KA  +  +M    + P   TY  LI G C+KG   I  +
Sbjct: 610 AVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAIL 669

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           +  +A         ++PN+V +   +DG  K     A     ++M   G+   VVT N++
Sbjct: 670 FAKEA----EARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G    GK+++   L  EM      PN+ T N L++G+ K+K V  + +L+  +   G+
Sbjct: 726 IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785

Query: 361 SP------SVI-----------------------------TYNTLIDAYCKEGRMEDAFA 385
            P      S+I                             T+N LI   C  G +  AF 
Sbjct: 786 LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFD 845

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M N M   G+  D +T + +++ L+R    +  R +++E+   G+      Y  L+  LC
Sbjct: 846 MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G  K A  + +EM      K  P  V  + +++   + GK ++A+ LL  +L+  L+P
Sbjct: 906 RVGDIKTAFVVKEEMI---AHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVP 962

Query: 506 NQTTYQIVREEMMEKGFIPD 525
              ++  +     + G + +
Sbjct: 963 TIASFTTLMHLFCKNGNVTE 982


>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
 gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
 gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
 gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 219/444 (49%), Gaps = 7/444 (1%)

Query: 21  WSKLK----NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVA 76
           W KL     + D   V   L     D +L L +F W+      SHSL     +LH+L   
Sbjct: 69  WDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKN 128

Query: 77  KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           +K+    S L   + NG     + +F AL            + D L   +    K     
Sbjct: 129 RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNAT 188

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F +  DYG   +V SCN  + +L+ +G+ +     Y+EM+R +I  N  + N V++G 
Sbjct: 189 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C++GKL+K  ++++DM+ LG     V+YN LI G+C+KG +    K   +   M ++G+ 
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM---MGKSGLQ 305

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VTFNTLI GFC+   +  A KVF EM +  +A   VTYN+LING    G  + A   
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+ +G++ +++T NALI G CK+    KA     ++ ++ L P+  T++ LI   C 
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
               +  F +  SM+  G  P+  T+N L++   R  + +G   ++ E+V   +     T
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485

Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
            + +   L   GK +    LL EM
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEM 509



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 183/376 (48%), Gaps = 26/376 (6%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA----GKLNKASDIMEDMKSLGVSPKVV 222
           F+ + Y Y+E          DS   V + L K      K   A+D    MK  G  P V 
Sbjct: 154 FDALLYSYRE---------CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           + N  +       G G++  A   +++M    I PN  T N ++ G+C+   +   +++ 
Sbjct: 205 SCNAYMSSLL---GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL 261

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           ++M   G  A  V+YN+LI G C  G L  A+ L++ M  SGL+PNVVT N LI+GFC+ 
Sbjct: 262 QDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +++A  +F ++    ++P+ +TYNTLI+ Y ++G  E AF     M+  G+  D+ TY
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N LI GL ++         + EL    +     T++ L+   C    + +   L   M  
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI- 440

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL-IPNQTTYQIVR------E 515
             +    PN  T+N+L+  FC+    + A+ +L E++ + + + ++T +Q+        +
Sbjct: 441 --RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498

Query: 516 EMMEKGFIPDIEGHMY 531
           + + K  + ++EG  +
Sbjct: 499 DQLVKKLLQEMEGKKF 514



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 46/104 (44%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           ++L  NS     L++          GFE +K     G   +  + N L+ A  +   F+ 
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
              V +EM RR I L+  + + V NGL   GK      ++++M+
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIF 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  I  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CK+G ++ AF  R  M+      D   Y  LI
Sbjct: 300 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL REG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CKDG    A    +   +M +E    + V Y  LI G C++G
Sbjct: 310 MKGLKPDKITYTTLIDGCCKDGDLDTA---FEHRKRMIQENTRLDDVVYTALISGLCREG 366

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 367 QSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 69  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRI---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  ++G+++        ++    R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCRE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GQSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 21  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 61

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 62  FETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 121

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI------TKWGLRP 175

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 235

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG +P+       I+GH  N
Sbjct: 236 DEMLVKGLVPNSVTFTTLIDGHCKN 260


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 218/411 (53%), Gaps = 9/411 (2%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           V+N +   G +  +R    G    V++C  L+R   + GK +    + + ++      ++
Sbjct: 117 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++N ++ G CK+G+++KA +++E M    V+P VVTYN ++   C     GK+ +A  V
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDS---GKLKEAMEV 230

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
               ++    P+ +T+  LI+  C D  +  AMK+ +EM   G    VVTYN LING+C 
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +G+LDEA+   + M + G KPNV+T N ++   C       A  L  D+  +G SPSV+T
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVT 350

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N LI+  C++  +  A  +   M   G +P+  +YN L+ G  +E  ++     +  +V
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G    +VTYN L+ ALCKDGK   AV +L++   +  +   P ++TYN +I G  + G
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ---LSSKGCSPVLITYNTVIDGLTKVG 467

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           K E A  LL E+  KGL P+  TY  +   +  +G + +     +++ G S
Sbjct: 468 KTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 209/368 (56%), Gaps = 9/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+    K G   +++   + ++R  +  ++ ++N +L  LC +GKL +A
Sbjct: 171 GAVPDVITYNVLIGGYCKSG---EIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEA 227

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++        P V+TY ILI+  C   G+G+  K   +  +M + G  P+ VT+N L
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK---LLDEMRKKGCKPDVVTYNVL 284

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK+  +  A+K    M S+G    V+T+N ++  +C  G+  +A  L  +M+  G 
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LIN  C+K+L+ +A  + + + + G  P+ ++YN L+  +C+E +M+ A  
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+ RG  PD+ TYN L+  L ++G V+    I+N+L + G    L+TYN ++  L 
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLT 464

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK++ AV LL+E   M ++   P+I+TY+ L++G  ++GK+++A  + +++    + P
Sbjct: 465 KVGKTEYAVELLEE---MRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP 521

Query: 506 NQTTYQIV 513
           +  TY  +
Sbjct: 522 SAVTYNAI 529



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 241/471 (51%), Gaps = 21/471 (4%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIF 102
           ++R FC S K  +A+       R++  L  +   P + ++   +  + K+G+      + 
Sbjct: 147 LIRGFCRSGKTKKAT-------RIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL 199

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             +S   D +  N+I+  +     +K        E   R         V++   L+ A  
Sbjct: 200 ERMSVAPDVVTYNTILRSLCDSGKLKE-----AMEVLDRQLQRECYPDVITYTILIEATC 254

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
            +        +  EM+++  + ++ ++N ++NG+CK G+L++A   + +M S G  P V+
Sbjct: 255 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI 314

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T+NI++   C     G+   A+ +  DM+  G  P+ VTFN LI+  C+   +  A+ V 
Sbjct: 315 THNIILRSMC---STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 371

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M  HG     ++YN L++G C + K+D A+   + M++ G  P++VT N L+   CK 
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 431

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V+ A  + + +S +G SP +ITYNT+ID   K G+ E A  +   M  +G+ PD+ TY
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL REG V+    I +++    ++   VTYN ++  LCK  ++ +A+  L  M  
Sbjct: 492 STLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM-- 549

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +EK  K P   TY +LI+G   +G  E+A  LLNEL  +G +   +  Q+V
Sbjct: 550 VEKGCK-PTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVV 599



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 201/388 (51%), Gaps = 25/388 (6%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  LR LV+ G+ E+     + M  +    ++ +   ++ G C++GK  KA+ IME +++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V+TYN+LI GYCK G I K   A  V + M    + P+ VT+NT++   C    
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDK---ALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  AM+V +          V+TY  LI   C D  + +A+ L DEM   G KP+VVT N 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LING CK+  +++A    +++   G  P+VIT+N ++ + C  GR  DA  + + ML +G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P V T+N LI  L R+  +    +++ ++  +G     ++YN L+   C++ K  +A+
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV- 513
             L+ M        +P+IVTYN L+   C+ GK++ A  +LN+L  KG  P   TY  V 
Sbjct: 404 EYLEIMVS---RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 514 ---------------REEMMEKGFIPDI 526
                           EEM  KG  PDI
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDI 488



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 137/255 (53%), Gaps = 6/255 (2%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E   N  +    ++  +   +K  E M   G    V+   SLI G C  GK  +A  + +
Sbjct: 106 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  SG  P+V+T N LI G+CK   ++KA  + + +S   ++P V+TYNT++ + C  G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSG 222

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++++A  + +  L R   PDV TY  LI     +  V     +++E+   G +  +VTYN
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +L+  +CK+G+  +A+  L+ M     +   PN++T+N++++  C  G+  DA  LL+++
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCK---PNVITHNIILRSMCSTGRWMDAERLLSDM 339

Query: 499 LEKGLIPNQTTYQIV 513
           L KG  P+  T+ I+
Sbjct: 340 LRKGCSPSVVTFNIL 354



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           + FEE  S          N  +  L  +G+L+E +   + M+  G  P+V+   +LI GF
Sbjct: 102 RSFEEFAS----------NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGF 151

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C+    +KA  + + +   G  P VITYN LI  YCK G ++ A  +   M    V PDV
Sbjct: 152 CRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDV 208

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TYN ++  L   G ++    +++  +       ++TY IL+ A C D    +A+ LLDE
Sbjct: 209 VTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDE 268

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
              M K+   P++VTYNVLI G C++G+L++A   LN +   G  PN  T+ I+   M  
Sbjct: 269 ---MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325

Query: 520 KGFIPDIE 527
            G   D E
Sbjct: 326 TGRWMDAE 333


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 240/484 (49%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  ++    YP      S +H + K+  ++    +F  +  C    C+   ++  + +
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG---CQPGYLLYNIFI 384

Query: 125 AYVKNMKP-------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
             + + +         L  +A+    D G+  + ++ +   R L   GKF+    +  EM
Sbjct: 385 GSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEM 444

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             +    +  +++ V+  LC A K+ KA  + E+MK  G+ P V TY ILID +CK G I
Sbjct: 445 MSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLI 504

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
               +A   F +M+ +   PN VT+ +LI  + K   +  A K+FE M   G    VVTY
Sbjct: 505 Q---QARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 298 NSLINGLCVDGKLDEAVALRDEMMA----------------SGLKPNVVTSNALINGFCK 341
            +LI+G C  G++D+A  +   M                      PN++T  AL++G CK
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              VE+A  L D +S  G  P+ I Y+ LID +CK G++E+A  +   M +RG  P++ T
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYT 681

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L +E  ++ V  ++++++ N     +V Y  ++  LCK GK+++A  L   M 
Sbjct: 682 YSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRL---ML 738

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           KME+   +PN++TY  +I GF + GK+E    L  ++  KG  PN  TY+++       G
Sbjct: 739 KMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTG 798

Query: 522 FIPD 525
            + +
Sbjct: 799 LLDE 802



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 201/405 (49%), Gaps = 23/405 (5%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           K  L FE  K+ G   +  SV +   L+ +  K G  +     + EM R     N+ ++ 
Sbjct: 471 KAFLLFEEMKKNG---IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYT 527

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++   KA K+  A+ + E M   G  P VVTY  LIDG+CK G I K  +  A  +  
Sbjct: 528 SLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGD 587

Query: 251 VENGIL-------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           +E+  +             PN +T+  L+DG CK   +  A ++ + M  +G     + Y
Sbjct: 588 IESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVY 647

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           ++LI+G C  GKL+ A  +  +M   G  PN+ T ++LIN   K+K ++    +   + E
Sbjct: 648 DALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
              +P+V+ Y  +ID  CK G+ E+A+ +   M + G  P+V TY  +I G  + G +E 
Sbjct: 708 NSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQ 767

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYN 476
              +  ++ + G     +TY +L+   C  G   +A  LLDEM    K+  WP +I +Y 
Sbjct: 768 CLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM----KQTYWPRHISSYR 823

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +I+GF    +   + GLL+EL E   +P ++ Y+I+ +  ++ G
Sbjct: 824 KIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAG 866



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 244/604 (40%), Gaps = 148/604 (24%)

Query: 32  VILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVV-AKKYPKIRSFLHMFV 90
           +++++ N    P   + +F W+++++  SH+ ++   L+  L   A    ++    H F+
Sbjct: 102 LVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVS---HKFL 158

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
              +      +   L+      CRN +               ++  E   R  D+G K+S
Sbjct: 159 MQIRDDDRELLRKLLNFLIQKCCRNGMW--------------NVALEELGRLKDFGYKAS 204

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKR------------------------------R 180
             + N L++  ++  K +    V++EM                                 
Sbjct: 205 PTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLE 264

Query: 181 RIELNLDS--FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG-------- 230
           + E   D+  +N +++GLC+A    +A DI++ M+S+   P VVTY IL+ G        
Sbjct: 265 KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLG 324

Query: 231 ---------------------------YCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
                                      YCK       YK   +FK M++ G  P  + +N
Sbjct: 325 RCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYK---LFKKMIKCGCQPGYLLYN 381

Query: 264 TLIDGFCKDENISA-----------------------------------------AMKVF 282
             I   C +E +                                           A ++ 
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM S G      TY+ +I  LC   K+++A  L +EM  +G+ P+V T   LI+ FCK 
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            L+++AR  FD++     +P+V+TY +LI AY K  ++ DA  +   ML  G  P+V TY
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 403 NCLIAGLSREGNVEGVRNIMNELV----------------NNGMRAGLVTYNILVGALCK 446
             LI G  + G ++    I   +                 N+     ++TY  LV  LCK
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             + ++A  LLD M     E   PN + Y+ LI GFC+ GKLE+A  +  ++ E+G  PN
Sbjct: 622 ANRVEEAHELLDTMSVNGCE---PNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN 678

Query: 507 QTTY 510
             TY
Sbjct: 679 LYTY 682



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 13/304 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+  + K  K     E F +  + G   ++ + + L+ +L KE + + V  V 
Sbjct: 643 NQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVL 702

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK  +A  +M  M+ +G  P V+TY  +IDG+   
Sbjct: 703 SKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGF--- 759

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G IGK+ +   +++DM   G  PN +T+  LI+  C    +  A ++ +EM        +
Sbjct: 760 GKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHI 819

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            +Y  +I G   + +   ++ L DE+  +   P       LI+ F K   +E A  L ++
Sbjct: 820 SSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEE 877

Query: 355 ISEQGLSPSVIT-----YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           IS    SPS+       Y +LI++     +++ AF +  SM+++ V+P++ST+  LI GL
Sbjct: 878 ISS---SPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGL 934

Query: 410 SREG 413
           +R G
Sbjct: 935 TRVG 938



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 34/301 (11%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K GK  +   +F  +S      C N      L+ +  K  +  L  +   +  +    
Sbjct: 654 FCKTGKLENAQEVFVKMS--ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCT 711

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V+    ++  L K GK E+   +  +M+      N+ ++  +++G  K GK+ +  ++
Sbjct: 712 PNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLEL 771

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-------------------------- 242
             DM S G +P  +TY +LI+  C  G + + ++                          
Sbjct: 772 YRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNR 831

Query: 243 ----ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG--IAAGVVT 296
               +  +  ++ EN  +P E  +  LID F K   +  A+ + EE+ S      A    
Sbjct: 832 EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYL 891

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y SLI  L    K+D+A  L   M+   + P + T   LI G  +    ++A  L D I 
Sbjct: 892 YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSIC 951

Query: 357 E 357
           +
Sbjct: 952 Q 952



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI   C+ G    A      + D G     +TYN LI    R   ++    +  E+ N
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G R    T      +LCK G+   A+SLL      EKE+  P+ V YN ++ G C+   
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLL------EKEEFVPDTVFYNRMVSGLCEASL 287

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ++A  +L+ +     IPN  TY+I+    + KG
Sbjct: 288 FQEAMDILDRMRSISCIPNVVTYRILLSGCLGKG 321


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 212/424 (50%), Gaps = 41/424 (9%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+   +   +G+  S+   N L+ ++ K+GK ++ E ++  M  + +  N  +++ +++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK GKL+ A   +  M  +G+   V  Y+ LI G+CK   +GK+  A ++F +M+ NG
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK---LGKLRAAKSLFDEMIANG 455

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN V + +LI G+CK+  +  A +++ EM   GI+    T+ +LI+GLC   ++ EA 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA- 373
            L  EM+   + PN VT N LI G CK+    +A  L D++ E+GL P   TY  LI   
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 374 ----------------------------------YCKEGRMEDAFAMRNSMLDRGVLPDV 399
                                             YCKEGR++DA      ML RGV  D+
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             Y+ LI G+ R+ +   + +++ ++ + G+R   V Y  ++ A  K G  K A  L D 
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M     E   PN+VTY  LI G C+ G ++ A  L  E+L    +PNQ TY    + +  
Sbjct: 696 MV---SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 752

Query: 520 KGFI 523
           +G I
Sbjct: 753 EGNI 756



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 210/368 (57%), Gaps = 6/368 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL++ V +   L+  L K  +FE  E +  EM       +  + + +++GL K G +  A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  +K  GV+P +  YN LI+  CK G   K+ +A+++F +M   G+ PN+VT++ L
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDG---KLDEAESLFNNMGHKGLFPNDVTYSIL 396

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID FCK   +  A+    +M   GI A V  Y+SLI+G C  GKL  A +L DEM+A+GL
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNVV   +LI+G+CK+  +  A  L+ +++ +G+SP+  T+  LI   C   RM +A  
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M++  V+P+  TYN LI G  +EGN      +++E+V  G+     TY  L+  LC
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+  +A   +++   ++ E++  N + ++ L+ G+C++G+L+DA     E+L +G+  
Sbjct: 577 STGRVSEAREFMND---LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAM 633

Query: 506 NQTTYQIV 513
           +   Y ++
Sbjct: 634 DLVCYSVL 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 276/584 (47%), Gaps = 62/584 (10%)

Query: 2   FCSANST--IEDITELIR-NHHWSKLKNTD-------PNTVILQLFNSDADPVLILRYFC 51
           FC++  +  +  +T+++R N  W    N         P+ V   L  +  D  L LR+F 
Sbjct: 22  FCASPDSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFN 81

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV-----KNGKFTSVSTIFHALS 106
           +        HS      L+H+LV +  Y    S L   +       G F S      +  
Sbjct: 82  FLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFES---FLDSYR 138

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
            C+ S    ++  D+L+  YV+N +   G    +   D G+   + + + +L  L++  +
Sbjct: 139 KCNFS---TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQ 195

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F    +++ E+    +  ++  +  V+  LC+     +A +++  M+S G    V TYN+
Sbjct: 196 FRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNV 255

Query: 227 LIDGYCK----------------KG-------------GIGKMYKADA---VFKDMVENG 254
            I G CK                KG             G+ K+ + +A   +  +M+E G
Sbjct: 256 FIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            +P+E   + L+DG  K  NI +A  +  ++   G+A  +  YN+LIN +C DGKLDEA 
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L + M   GL PN VT + LI+ FCK+  ++ A      ++E G+  +V  Y++LI  +
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G++  A ++ + M+  G+ P+V  Y  LI+G  +EG +     + +E+   G+    
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDA 491
            T+  L+  LC   +  +A  L  EM       +W   PN VTYNVLI+G C++G    A
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMV------EWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
             LL+E++EKGL+P+  TY+ +   +   G + +    M ++ G
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 215/438 (49%), Gaps = 35/438 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L   K  +   G E      ++G   S  + + L+  L K+G       +  ++K+  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +L  +N ++N +CK GKL++A  +  +M   G+ P  VTY+ILID +CK+G   K+ 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRG---KLD 407

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A      M E GI      +++LI G CK   + AA  +F+EM ++G+   VV Y SLI
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C +G+L  A  L  EM   G+ PN  T  ALI+G C    + +A  LF ++ E  + 
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN LI+ +CKEG    AF + + M+++G++PD  TY  LI+GL   G V   R  
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAV--------------------------- 454
           MN+L     +   + ++ L+   CK+G+   A+                           
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647

Query: 455 -----SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
                S++D + +M  +   P+ V Y  +I    + G L+ A GL + ++ +G +PN  T
Sbjct: 648 QQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707

Query: 510 YQIVREEMMEKGFIPDIE 527
           Y  +   + + G +   E
Sbjct: 708 YTALINGLCKIGLMDKAE 725



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 230/473 (48%), Gaps = 44/473 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++   K+GK     ++F+ +      L  N +   +L+ ++ K  K  +      +  
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMG--HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+K++V   + L+    K GK    + ++ EM    ++ N+  +  +++G CK G+L+
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +  +M   G+SP   T+  LI G C      +M +A+ +F +MVE  ++PNEVT+N
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHAN---RMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV----------------- 306
            LI+G CK+ N   A ++ +EM   G+     TY  LI+GLC                  
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 307 ------------------DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
                             +G+LD+A+    EM+  G+  ++V  + LI G  +++     
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L   + +QGL P  + Y T+IDA  K G ++ AF + + M+  G LP+V TY  LI G
Sbjct: 655 IDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALING 714

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + G ++    +  E++ +       TY   +  L  +G  +KA+ L D +     E  
Sbjct: 715 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL----EGF 770

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             N VTYN+LI+GFC+ G++++A  +L  +++ G+ P+  +Y  +  E   +G
Sbjct: 771 LANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 823



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 203/432 (46%), Gaps = 71/432 (16%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +V+    L+    KEG+  +   +Y EM  + I  N  +F  +++GLC A ++ +A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +  +M    V P  VTYN+LI+G+CK+G   + ++   +  +MVE G++P+  T+  L
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE---LLDEMVEKGLVPDTYTYRPL 571

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C    +S A +   ++         + +++L++G C +G+LD+A+    EM+  G+
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             ++V  + LI G  +++       L   + +QGL P  + Y T+IDA  K G ++ AF 
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSR---------------------------------- 411
           + + M+  G LP+V TY  LI GL +                                  
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751

Query: 412 -EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM------- 463
            EGN+E    + + L+  G  A  VTYNIL+   CK G+ ++A  +L  M          
Sbjct: 752 SEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810

Query: 464 ----------------EKEKKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
                           E  K W         P+ V YN LI G C  G+L  A  L +++
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870

Query: 499 LEKGLIPNQTTY 510
           + +G+ PN+ TY
Sbjct: 871 MRRGVKPNRATY 882



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 185/369 (50%), Gaps = 7/369 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  ++L+  + K       FE      + GL     +   L+  L   G+  +     
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +++  + +LN   F+ +L+G CK G+L+ A D   +M   GV+  +V Y++LI G  ++
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                +     + K M + G+ P+ V + T+ID   K  N+  A  +++ M S G    V
Sbjct: 649 QDRRSIID---LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY +LINGLC  G +D+A  L  EM+AS   PN  T    ++    +  +EKA +   D
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA-IQLHD 764

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G   + +TYN LI  +CK GR+++A  +  +M+D G+ PD  +Y+ +I    R G+
Sbjct: 765 VLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGD 824

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +   ++N G+    V YN L+   C  G+  KA  L D+M  M +  K PN  T
Sbjct: 825 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM--MRRGVK-PNRAT 881

Query: 475 YNVLIKGFC 483
           YN LI G C
Sbjct: 882 YNSLIHGTC 890



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++N ++ G CK G++ +A++++ +M   G+SP  ++Y+ +I  YC++G + +  K  
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK-- 830

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +++ M+  G+ P+ V +N LI G C    ++ A ++ ++M   G+     TYNSLI+G 
Sbjct: 831 -LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 889

Query: 305 CV 306
           C+
Sbjct: 890 CL 891



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 3/133 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  ++ ++ N L+R   K G+ ++   V   M    I  +  S++ ++   C+ G L +A
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E M + GV+P  V YN LI G C  G   ++ KA  +  DM+  G+ PN  T+N+L
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFLIYGCCVTG---ELTKAFELRDDMMRRGVKPNRATYNSL 885

Query: 266 IDGFCKDENISAA 278
           I G C   ++S+ 
Sbjct: 886 IHGTCLMSSVSST 898


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++L+  Y    +P   F   +    DYG+  S+ + N +L  L K GK       ++   
Sbjct: 98  NVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTT 157

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
                +++ ++  +++ L K  K+  A  +ME + + G +P + TYN L++G CK   +G
Sbjct: 158 TNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK---MG 214

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A  + + +V+NG  P+ VT+ +LIDG  K++    A K+F+EM   G+    V Y 
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI GL   GK+ +A ++   M + G  P+VVT + +I+G CK   +  A  +F  +  +
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+P+ + Y+ LI   CK  +M+ A  M   M      PD  TYN LI GL + G+VE  
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           R   +E++  G +  + TYNILV   CK G +  A  + D+M         PN+VTY  L
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM---SSSHCSPNVVTYGTL 451

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I G C++ +L  A+     + E+G  P+   Y  + + + + G
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 208/395 (52%), Gaps = 8/395 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++++    K+ K     + F+     G    + +   ++  L K  K +D   + +++  
Sbjct: 134 NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITA 193

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                 + ++N +LNGLCK G+L +A D++  +   G +P VVTY  LIDG  K+    +
Sbjct: 194 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE---KR 250

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            ++A  +FK+M   G++ + V +  LI G  +   I  A  V++ M S G    VVT ++
Sbjct: 251 SFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 310

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+GLC  G++  AV +   M A GL PN V  +ALI+G CK + ++ A  +   + +  
Sbjct: 311 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 370

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            +P  ITYN LID  CK G +E A A  + ML+ G  PDV TYN L++G  + GN +   
Sbjct: 371 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAAC 430

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVL 478
            + +++ ++     +VTY  L+  LCK  +  KA SL    F+  KE+   P+   Y+ L
Sbjct: 431 GVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA-SL---YFQHMKERGCPPDSFVYSSL 486

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + G C+ GKLE    L +E+   G+  +QT  +++
Sbjct: 487 VDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLI 521



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 36/365 (9%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N +L+   +  +  +A +++++  +    P V T+N+LI GYC      +  +A AV ++
Sbjct: 63  NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAR---EPEEAFAVIRE 119

Query: 250 MVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           M E+ G+ P+  T N ++ G CK   + AAM  FE   ++G    + TY ++++ L  + 
Sbjct: 120 MEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNK 179

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K+ +AVAL +++ A+G  P + T NAL+NG CK   +E+A  L   I + G +P V+TY 
Sbjct: 180 KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 239

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +LID   KE R  +A+ +   M  RG++ D   Y  LI GL + G +    ++   + + 
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ 299

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSL-------------------------------- 456
           G    +VT + ++  LCK G+   AV +                                
Sbjct: 300 GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 359

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L+ + +M+K    P+ +TYN+LI G C+ G +E A    +E+LE G  P+  TY I+   
Sbjct: 360 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSG 419

Query: 517 MMEKG 521
             + G
Sbjct: 420 FCKAG 424



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS--HGIAAGVVTYNSLINGLCVDGKLD 311
           G L  E++ + ++  F   ++   A ++F+ + S   G    V T N+L++      +  
Sbjct: 17  GRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHR 76

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTL 370
           EA  L    +A+   P+V T N LI G+C  +  E+A  +  ++ E  G++PS+ T+N +
Sbjct: 77  EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +   CK G++  A     +    G   D+ TY  ++  L++   ++    +M ++  NG 
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              + TYN L+  LCK G+ ++A+ LL    K+      P++VTY  LI G  ++ +  +
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLR---KIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L  E+  +GL+ +   Y  +   +++ G IP 
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQ 288


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 214/375 (57%), Gaps = 6/375 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   +S   L+  L + G+ +    + + +  + +  N+  ++ +++ +CK   +N A
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDA 217

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M S  +SP VVTY+ LI G+C    +GK+  A  +F  M+ + I PN  TF+ L
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCV---VGKLKYAVDLFNRMISDNINPNVYTFSIL 274

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGFCK+  +  A  V   M    +   VVTYNSL++G C+  ++++A +L + M   G+
Sbjct: 275 IDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V + + +INGFCK K+V++A  LF+++  + + P+V+TYN+L+D  CK GR   A  
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRG   ++ TYN ++  + +  +V+    ++ ++   G++  + TY +L+  LC
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC 454

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+   A  + +++     +   PNI TY  LI GFC KG  ++   +L+++ + G IP
Sbjct: 455 KVGRLDDAQKVFEDLLV---KGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIP 511

Query: 506 NQTTYQIVREEMMEK 520
           N  TY+I+   + EK
Sbjct: 512 NAITYEILIHSLFEK 526



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 206/368 (55%), Gaps = 6/368 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  +R     ++ +V+  + ++ ++ K+    D   +Y EM  +RI  ++ +++ +++G 
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C  GKL  A D+   M S  ++P V T++ILIDG+CK+G   K+ +A  V   M++  + 
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG---KVREAKNVLAVMMKKNVK 300

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+N+L+DG+C  + ++ A  +F  M   G+   V +Y+ +ING C    +DEA+ L
Sbjct: 301 LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +EM    + PNVVT N+L++G CK      A  L D++ ++G   ++ITYN+++DA CK
Sbjct: 361 FEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK 420

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
              ++ A  +   + ++G+ PD+ TY  LI GL + G ++  + +  +L+  G    + T
Sbjct: 421 NNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYT 480

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+   C  G   + +++L    KM+     PN +TY +LI    +K + + A  LL 
Sbjct: 481 YTSLINGFCNKGFFDEGLAMLS---KMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLR 537

Query: 497 ELLEKGLI 504
           E++ +GL+
Sbjct: 538 EMIARGLL 545



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 222/407 (54%), Gaps = 24/407 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++CN L+    + G  +    V+ ++ ++    +  +F  ++ GLC  G+++KA
Sbjct: 88  GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + + G     V+Y  LI+G C+   +G+   A  + + +    + PN V ++T+
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCR---VGETKAAVQLLRRVDGKLVRPNVVMYSTI 204

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CKD+ ++ A  ++ EM S  I+  VVTY+SLI+G CV GKL  AV L + M++  +
Sbjct: 205 IDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI 264

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV T + LI+GFCK+  V +A+ +   + ++ +   V+TYN+L+D YC   ++  A +
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M  RGV PDV +Y+ +I G  +   V+    +  E+    +   +VTYN LV  LC
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G++  A+ L+DEM     ++  P NI+TYN ++   C+   ++ A  LL ++ EKG+ 
Sbjct: 385 KSGRTSCALELVDEM----HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQ 440

Query: 505 PNQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
           P+  TY                Q V E+++ KG+ P+I  +   I+G
Sbjct: 441 PDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLING 487



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 200/369 (54%), Gaps = 19/369 (5%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           +GK    + + +  ST  DS+C++ ++ D               F+ +       +   V
Sbjct: 190 DGKLVRPNVVMY--STIIDSMCKDKLVND--------------AFDLYCEMVSKRISPDV 233

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ + L+      GK +    ++  M    I  N+ +F+ +++G CK GK+ +A +++  
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    V   VVTYN L+DGYC    + ++ KA ++F  M + G+ P+  +++ +I+GFCK
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCL---VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCK 350

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            + +  AMK+FEEM    I   VVTYNSL++GLC  G+   A+ L DEM   G   N++T
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N++++  CK   V+KA VL   I E+G+ P + TY  LI+  CK GR++DA  +   +L
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G  P++ TY  LI G   +G  +    +++++ +NG     +TY IL+ +L +  ++ 
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530

Query: 452 KAVSLLDEM 460
           KA  LL EM
Sbjct: 531 KAEKLLREM 539



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 179/333 (53%), Gaps = 6/333 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F  +L  L KA +   A  + + M+  G+ P  +T N+L++ + + G I   +   +VF 
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSF---SVFA 117

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +++ G  P+ VTF  LI G C    +  A+   +++ + G     V+Y +LINGLC  G
Sbjct: 118 KILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVG 177

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   AV L   +    ++PNVV  + +I+  CK KLV  A  L+ ++  + +SP V+TY+
Sbjct: 178 ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYS 237

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +LI  +C  G+++ A  + N M+   + P+V T++ LI G  +EG V   +N++  ++  
Sbjct: 238 SLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK 297

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            ++  +VTYN L+   C   +  KA SL +    M +    P++ +Y+++I GFC+   +
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV---MAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++A  L  E+  K + PN  TY  + + + + G
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 19/300 (6%)

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +N  +P  + F  ++    K +    A+ + ++M  +GI    +T N L+N     G + 
Sbjct: 51  KNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            + ++  +++  G  P+ VT   LI G C K  V KA    D +  QG     ++Y TLI
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLI 170

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  C+ G  + A  +   +  + V P+V  Y+ +I  + ++  V    ++  E+V+  + 
Sbjct: 171 NGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRIS 230

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTY+ L+   C  GK K AV L + M     +   PN+ T+++LI GFC++GK+ +A
Sbjct: 231 PDVVTYSSLISGFCVVGKLKYAVDLFNRMI---SDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 492 NGLLNELLEKGLIPNQTTYQ-------IVRE---------EMMEKGFIPDIEGHMYNISG 535
             +L  +++K +  +  TY        +V++          M ++G  PD+  +   I+G
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 207/377 (54%), Gaps = 8/377 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+   ++LL A+ K  K++ V Y++++M+   I  NL + N +LN  C+  +L+ A   +
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L++G+C+     ++Y A  +F  MV  G  PN V +NT+IDG 
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGD---RVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK + +  A+ +   M   GI   VVTYNSLI+GLC  G+  +A  +   M    + P+V
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T NALI+   K+  V +A   ++++  + L P ++TY+ LI   C   R+++A  M   
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G  PDV TY+ LI G  +   VE    +  E+   G+    VTY IL+   C+ GK
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
               +++ +E+F+ M      PNI+TYNVL+ G C  GK+E A  +L ++ + G+  +  
Sbjct: 377 ----LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432

Query: 509 TYQIVREEMMEKGFIPD 525
           TY I+   M + G + D
Sbjct: 433 TYNIIIRGMCKAGEVAD 449



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 230/444 (51%), Gaps = 15/444 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
           L   +V  +  P I  F   L    K  K+  V  ++  +       +LC  +I+++   
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN--- 124

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +  L      +    G + S+++   LL    +  +  D  Y++ +M     +
Sbjct: 125 -CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+  +N +++GLCK+ +++ A D++  M+  G+ P VVTYN LI G C  G   +   A
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG---RWSDA 240

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +   M +  I P+  TFN LID   K+  +S A + +EEM    +   +VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  +LDEA  +   M++ G  P+VVT + LING+CK K VE    LF ++S++G+  +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TY  LI  YC+ G++  A  +   M+  GV P++ TYN L+ GL   G +E    I+ 
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  NGM A +VTYNI++  +CK G+   A    D    +  +   P+I TY  ++ G  
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADA---WDIYCSLNCQGLMPDIWTYTTMMLGLY 477

Query: 484 QKGKLEDANGLLNELLEKGLIPNQ 507
           +KG   +A+ L  ++ E G++PN+
Sbjct: 478 KKGLRREADALFRKMKEDGILPNE 501



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 114/219 (52%), Gaps = 3/219 (1%)

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           KLD+++ L   M+     P++   + L++   K K  +    L++ +   G+  ++ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            L++ +C+  ++  A +    M+  G  P + T+  L+ G  R   V     + +++V  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G +  +V YN ++  LC   KSK+  + LD + +MEK+   P++VTYN LI G C  G+ 
Sbjct: 181 GYKPNVVIYNTIIDGLC---KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            DA  +++ + ++ + P+  T+  + +  +++G + + E
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 241/505 (47%), Gaps = 41/505 (8%)

Query: 44  VLILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVST 100
           VL L++  W  K+  L  +H   + G   H LV A+ Y   +S L H+  KN   +  + 
Sbjct: 33  VLALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKN---SGSNF 89

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +F  L         N  + D+L+  Y++          F      G K SV +CN ++ +
Sbjct: 90  LFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMAS 149

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           +VK  +   V   +K+M   R+  N+ SFN +++ LC  GKL KA +I+  M+  G  P 
Sbjct: 150 MVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPT 209

Query: 221 VVTYNILIDGYCKKGGIG-----------KMYKADA---------------------VFK 248
           +V+YN L+   CKKG              K  +AD                      V K
Sbjct: 210 IVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLK 269

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M    I PNEV++NTLI+GF K+  I  A +VF EM    ++  ++TYN LING C++G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +EA+ L D M A+ ++PN VT   L+NG  K    + AR + +  S    S + I++ 
Sbjct: 330 NFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHT 389

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +ID  C+ G +++AF +   M   GV PD+ T++ LI G  + GN+   + +M+++   
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYRE 449

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G     V ++ L+   CK G   + +        M    +  +  T N L+   C+ GKL
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEGMKFYAA---MNLNGQNADNFTCNSLVASLCENGKL 506

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV 513
            +A   L+ +   GL+PN  T+  +
Sbjct: 507 VEAEEFLHHISRIGLVPNSVTFDCI 531



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 223/488 (45%), Gaps = 59/488 (12%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+  L V  K  K  + L M  +NG   ++ +    LS C    C+       L+L +  
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC----CKKGRFKFALVLIHHM 236

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K              G+++ V + N  + +L +  +      V K+M+ + I  N  S
Sbjct: 237 ECK--------------GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG  K GK+  A+ +  +M  L +SP ++TYNILI+GYC  G   +   A  +  
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE---ALRLLD 339

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M  N + PNEVT  TL++G  K      A  + E    +  +   +++  +I+GLC +G
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNG 399

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LDEA  L  EM   G+ P+++T + LINGFCK   + KA+ +   I  +G  P+ + ++
Sbjct: 400 LLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFS 459

Query: 369 TLIDAYCKEGRMEDAFAMRNSM----------------------------------LDR- 393
           TLI   CK G + +      +M                                  + R 
Sbjct: 460 TLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G++P+  T++C+I G +  G+  G  ++ +++++ G      TY  L+  LCK     +A
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             LL    K+       + ++YN LI    + G L +A  L  E+++  ++P+  TY  +
Sbjct: 580 RKLLK---KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636

Query: 514 REEMMEKG 521
              ++ +G
Sbjct: 637 LSGLIREG 644



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 226/545 (41%), Gaps = 121/545 (22%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           P I S+   L    K G+F     + H +        +C  ++ ID L     +N +   
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSL----CRNSRSAQ 263

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G+   K+  +  +  + +S N L+   VKEGK      V+ EM    +  NL ++N ++N
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVT------------------------------- 223
           G C  G   +A  +++ M++  V P  VT                               
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL 383

Query: 224 ----YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA- 278
               + ++IDG C+ G + + ++   +  +M ++G+ P+ +TF+ LI+GFCK  N++ A 
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQ---LLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAK 440

Query: 279 ----------------------------------MKVFEEMGSHGIAAGVVTYNSLINGL 304
                                             MK +  M  +G  A   T NSL+  L
Sbjct: 441 EVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASL 500

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF------------------------- 339
           C +GKL EA      +   GL PN VT + +ING+                         
Sbjct: 501 CENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSP 560

Query: 340 ----------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                     CK +   +AR L   +    L+   I+YNTLI    K G + +A  +   
Sbjct: 561 FTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEE 620

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDG 448
           M+   +LPD  TY C+++GL REG +      +  L+    +    + Y   +  L K G
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +SK A+ L  E   ME++    +++  N +  G+ + GK+  A+ L+++   K +IPN T
Sbjct: 681 QSKAALYLFKE---MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLT 737

Query: 509 TYQIV 513
           T+ I+
Sbjct: 738 TFNIL 742



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 183/377 (48%), Gaps = 8/377 (2%)

Query: 147  LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
            L S V +C   +  L K G+ +   Y++KEM+ + + L+L + N + +G  + GK+  AS
Sbjct: 664  LNSIVYTC--FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSAS 721

Query: 207  DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
             ++   ++  V P + T+NIL+ GY +   I   +K   ++  M  +G  PN +T+++LI
Sbjct: 722  SLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFK---LYNLMRRSGFFPNRLTYHSLI 778

Query: 267  DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             G C    +   +K+ +   +       +T+N LI   C    LD+ + L   M    + 
Sbjct: 779  LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 327  PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
             +  T  A+ +   ++ + +   V   ++ ++G  P+   Y T++   C+ G ++ AF +
Sbjct: 839  LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 387  RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            ++ M+  G+  D +    ++ GL+  G +E    I+  ++         T+  L+   CK
Sbjct: 899  KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 447  DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                K+A +L      ME  +   +IV YNVLI   C  G +  A     E+ +KGL+PN
Sbjct: 959  KDNFKEAHNL---KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015

Query: 507  QTTYQIVREEMMEKGFI 523
             TTY+++   +  K ++
Sbjct: 1016 MTTYRVLVSAISTKHYV 1032



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 211/468 (45%), Gaps = 32/468 (6%)

Query: 79  YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
           YP I +F   ++ F K G       +   +    +    N++I   L+    K    + G
Sbjct: 417 YPDIITFSVLINGFCKVGNLNKAKEVMSKIY--REGFVPNNVIFSTLIYNSCKVGNVYEG 474

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            + +      G  +   +CN L+ +L + GK  + E     + R  +  N  +F+ ++NG
Sbjct: 475 MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
               G  + A  + + M S G  P   TY  L+   CK       ++A  + K +    +
Sbjct: 535 YANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQN---FWEARKLLKKLHCIPL 591

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             + +++NTLI    K  N+  A+++FEEM  + I     TY  +++GL  +G+L  A  
Sbjct: 592 AVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFI 651

Query: 316 LRDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
               +M    L  N +     I+G  K    + A  LF ++ E+GLS  +I  N++ D Y
Sbjct: 652 FLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGY 711

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            + G++  A ++ +   ++ V+P+++T+N L+ G SR  ++     + N +  +G     
Sbjct: 712 SRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNR 771

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE----- 489
           +TY+ L+  LC  G  +  + +L +MF  E      + +T+N+LI+  C+   L+     
Sbjct: 772 LTYHSLILGLCNHGMLELGIKML-KMFIAESST--IDDLTFNMLIRKCCEINDLDKVIDL 828

Query: 490 -------------DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
                        D    + ++L + ++     Y +   EM++KGFIP
Sbjct: 829 THNMEVFRVSLDKDTQKAVTDVLVRRMVSQN--YFVFMHEMLKKGFIP 874



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 160/363 (44%), Gaps = 18/363 (4%)

Query: 95   FTSVSTIFHALSTCSDSLCRNSI----IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
            ++ +  +F A S  S +  +N I      ++L+  Y +       F+ +      G   +
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 151  VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             L+ + L+  L   G  E    + K        ++  +FN ++   C+   L+K  D+  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 211  DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +M+   VS    T   + D   ++      +       +M++ G +P    + T++   C
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYF---VFMHEMLKKGFIPTSKQYCTMMKRMC 887

Query: 271  KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
            +  +I  A K+ ++M + GI+       +++ GL + GK++EA+ +   M+     P   
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 331  TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            T   L++ FCKK   ++A  L   +    +   ++ YN LI A C  G +  A      +
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 391  LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              +G+LP+++TY  L++ +S +  V     ++ +L + G+ +G +           DGKS
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL-----------DGKS 1056

Query: 451  KKA 453
            +K+
Sbjct: 1057 QKS 1059



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 3/196 (1%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N    + LI  + ++ +V  A   F  +  +G  PSV T N ++ +  K  R    +   
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ML   V P+VS++N LI+ L  +G ++   NI+  +  NG    +V+YN L+   CK 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+ K A+ L+  M   E +    ++ TYN+ I   C+  +      +L ++  K + PN+
Sbjct: 224 GRFKFALVLIHHM---ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 508 TTYQIVREEMMEKGFI 523
            +Y  +    +++G I
Sbjct: 281 VSYNTLINGFVKEGKI 296


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 220/422 (52%), Gaps = 12/422 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++    L+     + + +  F+  +    +G+  +  +C   + AL   G +ED   ++
Sbjct: 454 NTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 513

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +MK +  E N+ ++  +++GLC +G L  A  +   M   GV P  VTYN LI+   + 
Sbjct: 514 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 573

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             I   +    V   M  NG+  N VT+N +I G+C   +   AM V   M   G +A +
Sbjct: 574 RRIKYAF---VVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN++I G C  G    A+ + D M   G KP+  +   LI GFCK   +E A  LF++
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + + GL P+ +TY  LID YCK+ +++ A ++   M   G  P+V TYN LI GL+++ N
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIV 473
             G   +   ++  G+   +VTY  ++  LCK+G +    SL  EMF KM ++   PN++
Sbjct: 751 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST----SLALEMFNKMIEQGCLPNLL 806

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           TY+ LI+   Q+GK+E+A  L  EL   GLIP++ TY  + E  +  G +     H +N 
Sbjct: 807 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE----HAFNF 862

Query: 534 SG 535
            G
Sbjct: 863 LG 864



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/366 (34%), Positives = 189/366 (51%), Gaps = 8/366 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+  + + + LL  L + G    V   Y  M    ++ NL  +N V+N LCK G +  A
Sbjct: 345 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 404

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             IM+ +    +SP   TY  +I G+C+K  +     A  VF  M + G  PN VT++TL
Sbjct: 405 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD---SALQVFNQMAKEGCEPNTVTYSTL 461

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C    ++ A  +  EM  HGI     T    I  LC  G  ++A  L  +M   G 
Sbjct: 462 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGC 521

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNV T  ALI+G C   L++ A  LF  +S  G+ P+ +TYN LI+   +  R++ AF 
Sbjct: 522 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 581

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M   G+  ++ TYN +I G    G+ +    +MN ++  G  A LVTYN ++   C
Sbjct: 582 VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 641

Query: 446 KDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             G +  A+ +LD M     K  +W    +Y  LI GFC+  K+E A GL NE+++ GL 
Sbjct: 642 DSGNTTSALRILDLMRDGGCKPDEW----SYTELICGFCKISKMESAFGLFNEMVDDGLC 697

Query: 505 PNQTTY 510
           PN+ TY
Sbjct: 698 PNEVTY 703



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/344 (34%), Positives = 178/344 (51%), Gaps = 6/344 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+  + ++ N L+  LV+  + +    V   M R  +  N+ ++N ++ G C 
Sbjct: 548 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCI 607

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G   KA  +M +M   G S  +VTYN +I GYC  G      +   +   M + G  P+
Sbjct: 608 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR---ILDLMRDGGCKPD 664

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E ++  LI GFCK   + +A  +F EM   G+    VTY +LI+G C D KLD A +L +
Sbjct: 665 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 724

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  SG +PNV T N LI+G  K+     A  L   + E+G+ P+V+TY  +ID  CK G
Sbjct: 725 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 784

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A  M N M+++G LP++ TY+ LI  L +EG VE   N+  EL  +G+    +TY 
Sbjct: 785 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 844

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            ++ A    GK + A + L  M K   +   P + TY VLIKG 
Sbjct: 845 KMIEAYIMSGKVEHAFNFLGRMIKAGCQ---PTLWTYGVLIKGL 885



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 6/406 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++L + +        + F +    G + + ++ + L+  L   G+  +   + +EM    
Sbjct: 426 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 485

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +    +  LC  G    A  +  DMK+ G  P V TY  LI G C  G    + 
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG---LLK 542

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  M  +G+ PN VT+N LI+   ++  I  A  V   MG +G+   +VTYN +I
Sbjct: 543 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMI 602

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C+ G   +A+ + + M+  G   N+VT N +I G+C       A  + D + + G  
Sbjct: 603 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 662

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   +Y  LI  +CK  +ME AF + N M+D G+ P+  TY  LI G  ++  ++   ++
Sbjct: 663 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 722

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  +  +G R  + TYN+L+  L K      A  L   M +   E  +PN+VTY  +I G
Sbjct: 723 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE---EGIFPNVVTYTAMIDG 779

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C+ G    A  + N+++E+G +PN  TY  +   + ++G + + E
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 825



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 198/418 (47%), Gaps = 41/418 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           + R    G++ ++L  N ++ AL K+G   D E + K++    +  +  ++  ++ G C+
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
              L+ A  +   M   G  P  VTY+ LI+G C  G + + +    + ++M+ +GILP 
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD---LIREMILHGILPT 489

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T    I   C       A ++F +M + G    V TY +LI+GLCV G L  A+ L  
Sbjct: 490 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 549

Query: 319 EMMASGLKPNVVTSNALIN-----------------------------------GFCKKK 343
            M   G+ PN VT NALIN                                   G+C   
Sbjct: 550 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG 609

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             +KA ++ +++ ++G S +++TYNT+I  YC  G    A  + + M D G  PD  +Y 
Sbjct: 610 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 669

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  +   +E    + NE+V++G+    VTY  L+   CKD K   A SLL+    M
Sbjct: 670 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH---M 726

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++    PN+ TYNVLI G  ++     A  L   ++E+G+ PN  TY  + + + + G
Sbjct: 727 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 784



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 183/424 (43%), Gaps = 32/424 (7%)

Query: 122  LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
            L+  + K  K    F  F    D GL  + ++   L+    K+ K +    + + MKR  
Sbjct: 671  LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730

Query: 182  IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
               N+ ++N +++GL K    + A ++ + M   G+ P VVTY  +IDG CK G      
Sbjct: 731  CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL-- 788

Query: 242  KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
             A  +F  M+E G LPN +T+++LI    ++  +  A  +F E+  HG+    +TY  +I
Sbjct: 789  -ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 302  NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
                + GK++ A      M+ +G +P + T   LI G   + L+   R            
Sbjct: 848  EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907

Query: 350  ------------VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
                        V+   ++E     SV   N L+      GR  +A  +  SM+ +G+ P
Sbjct: 908  FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 967

Query: 398  DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            D   YN L+  L R  NV+    +   +   G    L  Y  L+ ALC+  + K+A    
Sbjct: 968  DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027

Query: 458  DEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            + M      + W P+ V   VLI G  + G  +     L+ +  +  +P+   Y I+  E
Sbjct: 1028 ENMLM----RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILARE 1083

Query: 517  MMEK 520
              +K
Sbjct: 1084 ASKK 1087



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI      E ++  M   + +   G+  G+  Y++L+  L   G     +     M++ G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++PN++  NA+IN  CK   V  A  +   + E  +SP   TY ++I  +C++  ++ A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + N M   G  P+  TY+ LI GL   G V    +++ E++ +G+     T    + AL
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G  + A  L  +M     E   PN+ TY  LI G C  G L+ A GL + +   G+ 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCE---PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 557

Query: 505 PNQTTY 510
           PN  TY
Sbjct: 558 PNTVTY 563


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 222/405 (54%), Gaps = 10/405 (2%)

Query: 123 MLAYVKNMKPHLG---FEAFKR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++AY   M  + G    +A +R   +  ++    +C+ L+R L   G+  +   V  EM 
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEML 187

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           RRR   ++ ++  +L   CK     +A  ++++M+  G +P +VTYN++++G C++G   
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG--- 244

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++  A    K++   G  PN V++N ++ G C  E    A ++  EMG  G    VVT+N
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LI+ LC  G ++ A+ + +++   G  PN ++ N L++ FCK+K ++KA    D +  +
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P +++YNTL+ A C+ G ++ A  + + + D+G  P + +YN +I GL++ G  +  
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++NE+V+ G++  ++TY+ +   LC++ + + A+       K++     PN V YN +
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG---KVQDMGIRPNTVLYNAI 481

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           I G C++ +   A  L   ++  G +PN++TY I+ E +  +G I
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 526



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 192/346 (55%), Gaps = 6/346 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL A  K   ++    +  EM+ +    ++ ++N V+NG+C+ G+++ A + ++++ S G
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P  V+YNI++ G C      +   A+ +  +M + G  PN VTFN LI   C+   + 
Sbjct: 261 CEPNTVSYNIVLKGLCTAE---RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 317

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V E++  +G +   ++YN L++  C   K+D+A+A  D M++ G  P++V+ N L+
Sbjct: 318 PALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 377

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C+   V+ A  L   + ++G +P +I+YNT+ID   K G+ ++A  + N M+ +G+ 
Sbjct: 378 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 437

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ TY+ + AGL RE  +E       ++ + G+R   V YN ++  LCK  ++  A+ L
Sbjct: 438 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 497

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              M         PN  TY +LI+G   +G +++A  LL+EL  +G
Sbjct: 498 FAYMI---GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 193/374 (51%), Gaps = 16/374 (4%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  L++ L   G+  +   V           ++ ++N ++ G C AG+++ A     + 
Sbjct: 100 TCAALIKKLSASGRTAEARRVLAACGP-----DVMAYNAMMAGYCGAGQVDAARRWCAER 154

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
               V     T + LI G C   G G+   A AV  +M+    +P+ VT+  L++  CK 
Sbjct: 155 ---AVERDAYTCDTLIRGLC---GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 208

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
                AMK+ +EM   G    +VTYN ++NG+C +G++D+A+     + + G +PN V+ 
Sbjct: 209 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 268

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N ++ G C  +  E A  L  ++ ++G  P+V+T+N LI   C++G +E A  +   +  
Sbjct: 269 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 328

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P+  +YN L+    ++  ++     ++ +V+ G    +V+YN L+ ALC+ G+   
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388

Query: 453 AVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           AV LL ++    K+K   P +++YN +I G  + GK ++A  LLNE++ KGL P+  TY 
Sbjct: 389 AVELLHQL----KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 444

Query: 512 IVREEMMEKGFIPD 525
            +   +  +  I D
Sbjct: 445 TIAAGLCREDRIED 458



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 168/323 (52%), Gaps = 3/323 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    +++ N ++  + +EG+ +D     K +     E N  S+N VL GLC A +  
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++M +M   G  P VVT+N+LI   C+KG +     A  V + + + G  PN +++N
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCSPNSLSYN 339

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+  FCK + +  AM   + M S G    +V+YN+L+  LC  G++D AV L  ++   
Sbjct: 340 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P +++ N +I+G  K    ++A  L +++  +GL P +ITY+T+    C+E R+EDA
Sbjct: 400 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 + D G+ P+   YN +I GL +        ++   ++ NG      TY IL+  
Sbjct: 460 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519

Query: 444 LCKDGKSKKAVSLLDEMFKMEKE 466
           L  +G  K+A  LLDE+    +E
Sbjct: 520 LAYEGLIKEARDLLDELCSRGEE 542



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 165/295 (55%), Gaps = 3/295 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    YG + + +S N +L+ L    ++ED E +  EM ++    N+ +FN +++
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A +++E +   G SP  ++YN L+  +CK+    KM KA A    MV  G
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQ---KKMDKAMAFLDLMVSRG 365

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C+   +  A+++  ++   G A  +++YN++I+GL   GK  EA+
Sbjct: 366 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 425

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM++ GL+P+++T + +  G C++  +E A   F  + + G+ P+ + YN +I   
Sbjct: 426 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           CK      A  +   M+  G +P+ STY  LI GL+ EG ++  R++++EL + G
Sbjct: 486 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 183/385 (47%), Gaps = 34/385 (8%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LR+LV+ G+ ++   +    +R     +  +   ++  L  +G+  +A  ++        
Sbjct: 74  LRSLVRRGELDEALRLVGSARRP----DAGTCAALIKKLSASGRTAEARRVLA-----AC 124

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P V+ YN ++ GYC  G      + DA  +   E  +  +  T +TLI G C     + 
Sbjct: 125 GPDVMAYNAMMAGYCGAG------QVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTAN 178

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ V +EM        VVTY  L+   C      +A+ L DEM   G  P++VT N ++N
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G C++  V+ A     ++   G  P+ ++YN ++   C   R EDA  +   M  +G  P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V T+N LI+ L R+G VE    ++ ++   G     ++YN L+ A CK  K  KA++ L
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-- 515
           D M        +P+IV+YN L+   C+ G+++ A  LL++L +KG  P   +Y  V +  
Sbjct: 359 DLMV---SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415

Query: 516 --------------EMMEKGFIPDI 526
                         EM+ KG  PDI
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDI 440



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 127/245 (51%), Gaps = 3/245 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E  ++   YG   + LS N LL A  K+ K +      
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    ++ S+N +L  LC++G+++ A +++  +K  G +P +++YN +IDG  K 
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +MV  G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 419 ---GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN++I GLC   +   A+ L   M+ +G  PN  T   LI G   + L+++AR L D+
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535

Query: 355 ISEQG 359
           +  +G
Sbjct: 536 LCSRG 540



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 21/221 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH+    KK  K  +FL + V  G +  + + ++ L T   +LCR+  +          
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS-YNTLLT---ALCRSGEV---------- 386

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                +  E   +  D G    ++S N ++  L K GK ++   +  EM  + ++ ++ +
Sbjct: 387 ----DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 442

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ +  GLC+  ++  A      ++ +G+ P  V YN +I G CK+    + + A  +F 
Sbjct: 443 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR---RETHSAIDLFA 499

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            M+ NG +PNE T+  LI+G   +  I  A  + +E+ S G
Sbjct: 500 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 216/395 (54%), Gaps = 24/395 (6%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V +   ++ +L K+G   +   ++ EM    I  ++  ++ +++GLC+ G+L +A +
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLI 266
             ++M+  G+S  V TYN LI G  + G    ++K    F + MV+ G  P+  TF  LI
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAG----LWKEVTWFLNLMVDRGFSPDAFTFTILI 258

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG CK+  +  A ++ E M   G    ++TYN+L+NGLC+ G+L++A  L + +   G+K
Sbjct: 259 DGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            NV + N LING+CK + +++A  LF+++  +GL PS +TYNTLI A C+ GR+  A  +
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M   G    +STY  L+ GL + G++E   ++   +     +  +  ++IL+  +C+
Sbjct: 379 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCR 438

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            GK ++A    DE+ K   E   P+ + YN+LI G C KG L +A  LL ++ EKG +P+
Sbjct: 439 AGKLEEAWKQFDEISKNGLE---PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 495

Query: 507 QTTYQIV----------------REEMMEKGFIPD 525
             T+ ++                 EEM  + F PD
Sbjct: 496 SITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 211/404 (52%), Gaps = 20/404 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DSLC++ +  + L              + F      G+   V+  + L+  L + G+ ++
Sbjct: 154 DSLCKDGMTTEAL--------------DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 199

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
               +KEM+ R I  ++ ++N +++GL +AG   + +  +  M   G SP   T+ ILID
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 259

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK+G +G+   A  + + M   G  P+ +T+NTL++G C    +  A K+FE +   G
Sbjct: 260 GLCKEGKVGE---AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   V +YN LING C D K+DEA  L +EM   GLKP+ VT N LI   C+   V  A+
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF ++   G    + TY  L+D  CK G +E+A  +  S+      P++  ++ L+ G+
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            R G +E      +E+  NG+    + YNIL+  LC  G   +AV LL   ++ME++   
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL---WQMEEKGCL 493

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           P+ +T+NV+I+   ++ ++ +A  LL E+  +   P++    ++
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 213/415 (51%), Gaps = 42/415 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++   L++ +  E    D   ++ EM  + +  +  ++  ++NGLCKA K   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E MK       V TY ++ID  CK G      +A  +F +M+  GILP+ V +++L
Sbjct: 132 IKLHEKMKG-NCKGDVFTYGMIIDSLCKDG---MTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI------------------------ 301
           +DG C+   +  A++ F+EM   GI+A V TYNSLI                        
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 302 -----------NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                      +GLC +GK+ EA  + + M   G +P+++T N L+NG C    +E A  
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF+ ++++G+  +V +YN LI+ YCK+ ++++AF +   M  +G+ P   TYN LI  L 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G V   + +  E+   G    L TY +L+  LCK+G  ++A+ L   + K E +   P
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK---P 424

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           NI  +++L+ G C+ GKLE+A    +E+ + GL P+   Y I+   +  KG + +
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 479



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 171/338 (50%), Gaps = 21/338 (6%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+H L  A  + ++  FL++ V  G F+  +  F  L    D LC+   + +   +  + 
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRG-FSPDAFTFTILI---DGLCKEGKVGEAQQILELM 277

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           + K              G +  +L+ N L+  L   G+ ED   +++ +  R I+LN+ S
Sbjct: 278 HHK--------------GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS 323

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG CK  K+++A  + E+M+  G+ P  VTYN LI   C+ G   ++  A  +F 
Sbjct: 324 YNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG---RVRTAQKLFV 380

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G      T+  L+DG CK+ ++  A+ +F+ +        +  ++ L++G+C  G
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           KL+EA    DE+  +GL+P+ +  N LING C K ++ +A  L   + E+G  P  IT+N
Sbjct: 441 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 500

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            +I    KE  + +A  +   M +R   PD +  + L+
Sbjct: 501 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 37/260 (14%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK----- 342
            G     VT  +L+ G+ ++  + +AV L DEM   GL  +  T   LING CK      
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 343 --KLVEK---------------------------ARVLFDDISEQGLSPSVITYNTLIDA 373
             KL EK                           A  +F ++   G+ P V+ Y++L+D 
Sbjct: 131 AIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ GR+++A      M  RG+  DV TYN LI GLSR G  + V   +N +V+ G    
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             T+ IL+  LCK+GK  +A  +L+ M    KE   P+I+TYN L+ G C  G+LEDA  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKE---PDILTYNTLMNGLCLVGQLEDATK 307

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L   L ++G+  N  +Y I+
Sbjct: 308 LFESLADRGIKLNVFSYNIL 327



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 4/154 (2%)

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G  P  +T  TL+     E  + DA  + + M ++G+  D  TY  LI GL +     
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCK-ARKT 128

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
           G+   ++E +    +  + TY +++ +LCKDG + +A+ +  EM         P++V Y+
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGA---GILPDVVVYS 185

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            L+ G C+ G+L++A     E+  +G+  +  TY
Sbjct: 186 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 219


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 231/435 (53%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++     + +C ++L  L+K   
Sbjct: 63  ETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  + +D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRL---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGD-------LDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 21  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 61

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +      + T   ++  L +  
Sbjct: 62  LETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLK 121

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAI------TKWGLRP 175

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG +P+       I+GH  N
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKN 260


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  +   LL  L   G   +   V+  M+      +   +  +++GLC AG+  +A
Sbjct: 137 GCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREA 196

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ D  + G  P VV YN LIDGYC    +G +  A  VF+ M  NG  PN  T+  L
Sbjct: 197 ETLLSDAMAEGFEPNVVVYNALIDGYCN---VGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFCK   +  AM +F  M   G+   VVTY +LI G C DG+LD A  L   M  SGL
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T + LI+  CK + V +A++L   + ++G+  + I Y +LID  CK GR   A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +++ +G +PD  TY+ LI GL R+  +     ++++++  G++   VTY I++  L 
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++  +  +  +LD+M     +   P++ TY + ++ +C +G++EDA  ++  +++ G+ P
Sbjct: 434 REVGADGSKKILDKMIAAGIK---PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 506 NQTTY 510
           N  TY
Sbjct: 491 NLVTY 495



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 217/452 (48%), Gaps = 38/452 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++ + L+  Y       L  + F+R    G   +V +  +L+    K  K +    ++
Sbjct: 211 NVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLF 270

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M    +  N+ ++  ++ G C  G+L+ A  +++ M++ G+ P   T ++LID  CK 
Sbjct: 271 SRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKH 330

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G+   A  +   +++ GI  NE+ + +LIDG CK    +AA ++ + + S G     
Sbjct: 331 ERVGE---AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA 387

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY+SLI+GLC   +L EA+ + D+MM  G++P+ VT   +I+   ++   + ++ + D 
Sbjct: 388 HTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDK 447

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G+ P V TY   + +YC EGRMEDA  M   M+D GV P++ TYN LI G +  G 
Sbjct: 448 MIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGL 507

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS----------------KKAVSLLD 458
                +    +V NG +    +Y +L+  L K   S                K    LL+
Sbjct: 508 TSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLE 567

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----- 513
           EM K++   +   I  YN  +   C+  +L++A  LL E+    L P++  Y  +     
Sbjct: 568 EMVKLQLPSE---IDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCC 624

Query: 514 -----------REEMMEKGFIPDIEGHMYNIS 534
                       + M++ G+IP +E + + IS
Sbjct: 625 RLKMLTEALTFVDSMVKSGYIPQLESYRHIIS 656



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 188/386 (48%), Gaps = 26/386 (6%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  L AL +     D+E     M  R    NL ++  ++N  C AG L  +   +  +  
Sbjct: 45  NAFLMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P    Y   + GYC+ G +     A  +F  M   G +    T+  L+ G C    
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAH---ACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  AM VF  M + G A     Y ++++GLC  G+  EA  L  + MA G +PNVV  NA
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNA 217

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+G+C    +E A  +F+ +   G SP+V TY  LI  +CK  +++ A  + + M+D G
Sbjct: 218 LIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAG 277

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           ++P+V TY  LI G   +G ++    ++  + N+G+     T ++L+ ALCK  +  +A 
Sbjct: 278 LVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQ 337

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ--- 511
            LL  +  ++K  K   IV Y  LI G C+ G+   A+ L+  L+ +G +P+  TY    
Sbjct: 338 LLLGSL--IQKGIKVNEIV-YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 512 -------------IVREEMMEKGFIP 524
                        +V ++MMEKG  P
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQP 420



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/465 (21%), Positives = 214/465 (46%), Gaps = 27/465 (5%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P +R++  +   F K+ K      +F  +      L  N +    L+     + +    +
Sbjct: 245 PNVRTYTELISGFCKSRKLDRAMMLFSRMV--DAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
              +   + GL  +  +C+ L+ AL K  +  + + +   + ++ I++N   +  +++GL
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CKAG+   A  +M+ + S G  P   TY+ LIDG C++    ++ +A  V  DM+E G+ 
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK---ELSEAMLVLDDMMEKGVQ 419

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VT+  +ID   ++     + K+ ++M + GI   V TY   +   C +G++++A  +
Sbjct: 420 PSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHM 479

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M+  G+ PN+VT NALI G+    L  +A   F  +   G  P+  +Y  L+    K
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539

Query: 377 E----------------GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +                  M+    +   M+   +  ++  YNC +  L R   ++  + 
Sbjct: 540 KESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKI 599

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+ +  +      Y  ++   C+     +A++ +D M K       P + +Y  +I 
Sbjct: 600 LLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVK---SGYIPQLESYRHIIS 656

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             C++G ++ A  +  ++L K     +  ++I+ + +++KG++ +
Sbjct: 657 SLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAE 701



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 37/392 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+  L  A ++      +   V  G         H  S+  D LCR   + + +++  + 
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDA----HTYSSLIDGLCRQKELSEAMLV--LD 411

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +M             + G++ S ++   ++  LV+E   +  + +  +M    I+ ++ +
Sbjct: 412 DMM------------EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFT 459

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +   +   C  G++  A  +M  M   GV P +VTYN LI GY     +G   +A + FK
Sbjct: 460 YTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY---ANLGLTSQAFSTFK 516

Query: 249 DMVENGILPNEVTFNTLIDGFCKDE---NISA---------AMK----VFEEMGSHGIAA 292
            MV NG  PNE ++  L+    K E   NI A          MK    + EEM    + +
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPS 576

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            +  YN  +  LC   +LDEA  L  EM ++ L P+     ++I   C+ K++ +A    
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D + + G  P + +Y  +I + C+EG ++ A  +   ML +    +   +  LI GL ++
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQK 696

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           G V    ++++ +     R     Y  L G +
Sbjct: 697 GYVAECSSLLSVMEEKNYRPSDALYARLTGKI 728


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 209/376 (55%), Gaps = 6/376 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            G + + ++ N L+  L    K  +   +   M  +  + +L ++  V+NGLCK G  + A
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++  M+   + P V+ YN +IDG CK      M  A  +FK+M   GI PN VT+++L
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCK---YKHMDDALNLFKEMETKGIRPNVVTYSSL 911

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            I   C     S A ++  +M    I   V T+++LI+    +GKL EA  L DEM+   +
Sbjct: 912  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             P++VT ++LINGFC    +++A+ +F+ +  +   P V+TYNTLI  +CK  R+E+   
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +   M  RG++ +  TYN LI GL + G+ +  + I  E+V++G+   ++TYN L+  LC
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 446  KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            K+GK +KA+ + +    +++ K  P I TYN++I+G C+ GK+ED   L   L  KG+ P
Sbjct: 1092 KNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 1148

Query: 506  NQTTYQIVREEMMEKG 521
            +   Y  +      KG
Sbjct: 1149 DVVAYNTMISGFCRKG 1164



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 222/414 (53%), Gaps = 41/414 (9%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+VK  K++ V  + K+M+   I  +L +FN V+N  C   +++ A  I+
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P  VT   L++G+C++    ++  A ++   MVE G  P+ V +N +ID  
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRN---RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 303

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------------------------ 305
           CK + ++ A   F+E+   GI   VVTY +L+NGLC                        
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363

Query: 306 -----------VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                       +GK+ EA  L +EM+   + P++VT ++LING C    +++A  +FD 
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G    V++YNTLI+ +CK  R+ED   +   M  RG++ +  TYN LI G  + G+
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+  +   +++   G+   + TYNIL+G LC +G+ +KA+ + ++M K E +    +IVT
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD---LDIVT 540

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           Y  +I+G C+ GK+E+A  L   L  KGL P+  TY  +   +  KG + ++E 
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 594



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 215/407 (52%), Gaps = 6/407 (1%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            N++  + L+     + K         R    G +  +++   ++  L K G  +    + 
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             +M++ ++E  +  +N +++GLCK   ++ A ++ ++M++ G+ P VVTY+ LI   C  
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-- 916

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               G+   A  +  DM+E  I P+  TF+ LID F K+  +  A K+++EM    I   +
Sbjct: 917  -NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 295  VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            VTY+SLING C+  +LDEA  + + M++    P+VVT N LI GFCK K VE+   +F +
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            +S++GL  + +TYN LI    + G  + A  +   M+  GV P++ TYN L+ GL + G 
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095

Query: 415  VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +E    +   L  + M   + TYNI++  +CK GK +    L      +  +   P++V 
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF---CNLSLKGVKPDVVA 1152

Query: 475  YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            YN +I GFC+KG  E+A+ L  E+ E G +PN   Y  +    +  G
Sbjct: 1153 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 15/446 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L   VK  K+  V ++   +      + L   +I+I+   
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             +    +  L      +    G +   ++   L+    +  +  D   +  +M     +
Sbjct: 235 CCF----QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ ++N +++ LCK  ++N A D  ++++  G+ P VVTY  L++G C      +   A
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---RWSDA 347

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +  DM++  I PN +T++ L+D F K+  +  A ++FEEM    I   +VTY+SLING
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  ++DEA  + D M++ G   +VV+ N LINGFCK K VE    LF ++S++GL  +
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TYNTLI  + + G ++ A    + M   G+ PD+ TYN L+ GL   G +E    I  
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++    M   +VTY  ++  +CK GK ++A SL      +  +   P+IVTY  ++ G C
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF---CSLSLKGLKPDIVTYTTMMSGLC 584

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTT 509
            KG L +   L  ++ ++GL+ N  T
Sbjct: 585 TKGLLHEVEALYTKMKQEGLMKNDCT 610



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 238/473 (50%), Gaps = 15/473 (3%)

Query: 56   ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSL 112
            EL+   ++ L G ++ S    + +P I  F   L    K  KF  V ++   +      +
Sbjct: 673  ELKLDDAVALFGEMVKS----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--I 726

Query: 113  CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
              N     +L+  + +  +  L      +    G + ++++ + LL       +  +   
Sbjct: 727  PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 786

Query: 173  VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
            +  +M     + N  +FN +++GL    K ++A  +++ M + G  P +VTY ++++G C
Sbjct: 787  LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846

Query: 233  KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
            K+G     +    +   M +  + P  + +NT+IDG CK +++  A+ +F+EM + GI  
Sbjct: 847  KRGDTDLAFN---LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903

Query: 293  GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             VVTY+SLI+ LC  G+  +A  L  +M+   + P+V T +ALI+ F K+  + +A  L+
Sbjct: 904  NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963

Query: 353  DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D++ ++ + PS++TY++LI+ +C   R+++A  M   M+ +   PDV TYN LI G  + 
Sbjct: 964  DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 1023

Query: 413  GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
              VE    +  E+   G+    VTYNIL+  L + G    A  +  EM     +   PNI
Sbjct: 1024 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS---DGVPPNI 1080

Query: 473  VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +TYN L+ G C+ GKLE A  +   L    + P   TY I+ E M + G + D
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 182/322 (56%), Gaps = 3/322 (0%)

Query: 139  FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            FK     G++ +V++ + L+  L   G++ D   +  +M  R+I  ++ +F+ +++   K
Sbjct: 893  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 199  AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             GKL +A  + ++M    + P +VTY+ LI+G+C      ++ +A  +F+ MV     P+
Sbjct: 953  EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD---RLDEAKQMFEFMVSKHCFPD 1009

Query: 259  EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             VT+NTLI GFCK + +   M+VF EM   G+    VTYN LI GL   G  D A  +  
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 319  EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            EM++ G+ PN++T N L++G CK   +EKA V+F+ +    + P++ TYN +I+  CK G
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129

Query: 379  RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ++ED + +  ++  +GV PDV  YN +I+G  R+G+ E    +  E+  +G       YN
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 1189

Query: 439  ILVGALCKDGKSKKAVSLLDEM 460
             L+ A  +DG  + +  L+ EM
Sbjct: 1190 TLIRARLRDGDREASAELIKEM 1211



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 228/441 (51%), Gaps = 39/441 (8%)

Query: 117  IIIDMLMLAY----VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
            +I  ML   Y    +K++K  +  +A      +  K+S     +L R  + E K +D   
Sbjct: 622  LIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVA 681

Query: 173  VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
            ++ EM + R   ++  F+ +L+ + K  K +    + E M++LG+     TY+ILI+ +C
Sbjct: 682  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 741

Query: 233  KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
            ++    ++  A AV   M++ G  PN VT ++L++G+C  + IS A+ + ++M   G   
Sbjct: 742  RRS---QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798

Query: 293  GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
              VT+N+LI+GL +  K  EA+AL D M+A G +P++VT   ++NG CK+   + A  L 
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 353  DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            + + +  L P V+ YNT+ID  CK   M+DA  +   M  +G+ P+V TY+ LI+ L   
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 918

Query: 413  GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---------- 462
            G       ++++++   +   + T++ L+ A  K+GK  +A  L DEM K          
Sbjct: 919  GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978

Query: 463  ----------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
                                  M  +  +P++VTYN LIKGFC+  ++E+   +  E+ +
Sbjct: 979  SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 1038

Query: 501  KGLIPNQTTYQIVREEMMEKG 521
            +GL+ N  TY I+ + + + G
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAG 1059



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 233/450 (51%), Gaps = 15/450 (3%)

Query: 69   LLHSLVVAKKYPKIRSF---LH-MFVKNGKFTSVSTIFHALST-CSDSLCRNSIIIDMLM 123
            L+  + V    P   +F   +H +F+ N    +++ I   ++  C   L    ++++ L 
Sbjct: 787  LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL- 845

Query: 124  LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
                K     L F    +     L+  VL  N ++  L K    +D   ++KEM+ + I 
Sbjct: 846  ---CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 902

Query: 184  LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
             N+ +++ +++ LC  G+ + AS ++ DM    ++P V T++ LID + K+G   K+ +A
Sbjct: 903  PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEA 959

Query: 244  DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
            + ++ +MV+  I P+ VT+++LI+GFC  + +  A ++FE M S      VVTYN+LI G
Sbjct: 960  EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019

Query: 304  LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
             C   +++E + +  EM   GL  N VT N LI G  +    + A+ +F ++   G+ P+
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079

Query: 364  VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            ++TYNTL+D  CK G++E A  +   +    + P + TYN +I G+ + G VE   ++  
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 1139

Query: 424  ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
             L   G++  +V YN ++   C+ G  ++A +L  EM   +++   PN   YN LI+   
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM---KEDGTLPNSGCYNTLIRARL 1196

Query: 484  QKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + G  E +  L+ E+   G   + +T  +V
Sbjct: 1197 RDGDREASAELIKEMRSCGFAGDASTIGLV 1226



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 181/308 (58%), Gaps = 6/308 (1%)

Query: 151  VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            V + + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A  + E
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 211  DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
             M S    P VVTYN LI G+CK     ++ +   VF++M + G++ N VT+N LI G  
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056

Query: 271  KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
            +  +   A ++F+EM S G+   ++TYN+L++GLC +GKL++A+ + + +  S ++P + 
Sbjct: 1057 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116

Query: 331  TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            T N +I G CK   VE    LF ++S +G+ P V+ YNT+I  +C++G  E+A A+   M
Sbjct: 1117 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176

Query: 391  LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             + G LP+   YN LI    R+G+ E    ++ E+ + G  AG  +   LV  +  DG+ 
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLHDGRL 1235

Query: 451  KKAVSLLD 458
             K  S LD
Sbjct: 1236 DK--SFLD 1241



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 205/406 (50%), Gaps = 37/406 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK  +++   ++  L  +G   +VE +Y +MK+  +  N        +     G +  +
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLS 619

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------------------GIGKMYKA 243
           +++++ M S G +P ++    +  G CKK                       G+ ++   
Sbjct: 620 AELIKKMLSCGYAPSLL--KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLD 677

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DAV  F +MV++   P+ + F+ L+    K       + + E+M + GI     TY+ LI
Sbjct: 678 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 737

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C   +L  A+A+  +MM  G +PN+VT ++L+NG+C  K + +A  L D +   G  
Sbjct: 738 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 797

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +T+NTLI       +  +A A+ + M+ +G  PD+ TY  ++ GL + G+ +   N+
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +N++    +  G++ YN ++  LCK      A++L  EM   E +   PN+VTY+ LI  
Sbjct: 858 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKGIRPNVVTYSSLISC 914

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            C  G+  DA+ LL++++E+ + P+  T+  + +  +++G + + E
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 149/272 (54%), Gaps = 3/272 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F DMV++   P+ V FN L+    K +     + + ++M   GI   + T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +IN  C   ++  A+++  +M+  G +P+ VT  +L+NGFC++  V  A  L D + E 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P ++ YN +ID+ CK  R+ DAF     +  +G+ P+V TY  L+ GL         
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++++++   +   ++TY+ L+ A  K+GK  +A  L +EM +M  +   P+IVTY+ L
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID---PDIVTYSSL 404

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I G C   ++++AN + + ++ KG + +  +Y
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +D  ++ A+ +F +M        +V +N L++ +    K D  ++L  +M   G++ ++ 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +IN FC    V  A  +   + + G  P  +T  +L++ +C+  R+ DA ++ + M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G  PD+  YN +I  L +   V    +   E+   G+R  +VTY  LV  LC   + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL +M    K+K  PN++TY+ L+  F + GK+ +A  L  E++   + P+  TY
Sbjct: 345 SDAARLLSDMI---KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D KL++A+ L  +M+ S   P++V  N L++   K K  +    L   +   G+   + T
Sbjct: 166 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N +I+ +C   ++  A ++   ML  G  PD  T   L+ G  R   V    ++++++V
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G +  +V YN ++ +LCK  +   A     E+   E++   PN+VTY  L+ G C   
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSS 342

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  LL+++++K + PN  TY  + +  ++ G
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 377



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 84   SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
            + L    KNGK      +F  L  S    ++   +I+I+       K  K   G++ F  
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE----GMCKAGKVEDGWDLFCN 1140

Query: 142  AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
                G+K  V++ N ++    ++G  E+ + ++KEMK      N   +N ++    + G 
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200

Query: 202  LNKASDIMEDMKSLGVSPKVVTY----NILIDGYCKK 234
               +++++++M+S G +    T     N+L DG   K
Sbjct: 1201 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 1237


>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 502

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 257/510 (50%), Gaps = 83/510 (16%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI--FHALSTCSDSLCRNSIIIDML 122
           +   L+H LV +KK P+ +S L   ++    +    I    + S+ + +  +N ++ D+L
Sbjct: 24  IIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSRAKVIDSLISSSSSNLNSNQNVVVFDLL 83

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  YV+  K   GFEAF+     G   S+ +CN LL ++VK      V     EM+ + +
Sbjct: 84  IRTYVQARKLREGFEAFQLLRKRGFCVSINACNALLGSIVK------VRVYLSEMEAKGL 137

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN-ILIDGYCKKGGIGKMY 241
           +  L ++N ++NGLCK G    A  +++ M  +G  P   T+N +L++ + K+     ++
Sbjct: 138 KPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKE----DVW 193

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A+ VF +M++ G++P+ ++F+++I  F ++  +  A+  FE+M   G+    V Y  LI
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NG C +  +  A+ +R+EM+      +VVT N L+NG C+ K+++ A  LF ++ E+G+ 
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 313

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNS----------------MLDRGVLPDVSTYNCL 405
           P   T  TLI  YCK+G M  A ++  +                M+ R + P   +++ L
Sbjct: 314 PDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSIL 373

Query: 406 IAGLS--------------REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           I G                R GNV    + +N +V+ G+    +TYN L+  L       
Sbjct: 374 INGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRL------- 426

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                             P++VTYN ++ GF + G++++A  +L+++++KG+ P+++TY 
Sbjct: 427 -----------------LPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYT 469

Query: 512 I----------------VREEMMEKGFIPD 525
                            V +EM+++GF+PD
Sbjct: 470 SVINGYVSKDNMKEAFRVHDEMLQRGFVPD 499


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 245/481 (50%), Gaps = 19/481 (3%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---L 86
           N  +LQ  N    P  I R++  +    R+S +L     L   ++ ++  P I  F   L
Sbjct: 18  NLCLLQKGNPVIVP-FISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVL 76

Query: 87  HMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
               K+  +  V ++FH +  C     L   +I+I+ L     +  +  +      +   
Sbjct: 77  SKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL----CRCSRFVIALSVVGKMMK 132

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G +  V++ + L+    +  +  D   +  +M+      ++  +N +++G CK G +N 
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++ + M+  GV    VTYN L+ G C  G   +   A  + +DMV   I+PN +TF  
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSG---RWSDAARLMRDMVMRDIVPNVITFTA 249

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID F K+   S AMK++EEM    +   V TYNSLINGLC+ G++DEA  + D M+  G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT N LINGFCK K V++   LF +++++GL    ITYNT+I  Y + GR + A 
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M  R   P++ TY+ L+ GL     VE    +   +  + +   + TYNI++  +
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G  + A  L   +     +   P++V+Y  +I GFC+K + + ++ L  ++ E GL+
Sbjct: 427 CKIGNVEDAWDLFRSL---SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483

Query: 505 P 505
           P
Sbjct: 484 P 484



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 206/393 (52%), Gaps = 38/393 (9%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  +++L  + K   ++ V  ++  M+   I  +L S+N V+N LC+  +   A  ++
Sbjct: 68  SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M   G  P VVT + LI+G+C+     +++ A  +   M E G  P+ V +NT+IDG 
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGN---RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   ++ A+++F+ M   G+ A  VTYNSL+ GLC  G+  +A  L  +M+   + PNV
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T  A+I+ F K+    +A  L+++++ + + P V TYN+LI+  C  GR+++A  M + 
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM------------------- 430
           M+ +G LPDV TYN LI G  +   V+    +  E+   G+                   
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364

Query: 431 -------------RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
                        R  + TY+IL+  LC + + +KA+ L + M K E E    +I TYN+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL---DITTYNI 421

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +I G C+ G +EDA  L   L  KGL P+  +Y
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 145/265 (54%), Gaps = 3/265 (1%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  M+++  LP+ V F+ ++    K +N    + +F  M   GI   + +YN +IN LC
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              +   A+++  +MM  G +P+VVT ++LINGFC+   V  A  L   + E G  P V+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNT+ID  CK G + DA  + + M   GV  D  TYN L+AGL   G       +M ++
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V   +   ++T+  ++    K+GK  +A+ L +EM +   +   P++ TYN LI G C  
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD---PDVFTYNSLINGLCMH 292

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
           G++++A  +L+ ++ KG +P+  TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTY 317


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 210/367 (57%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L +LVK   +  V Y+ K+M+ R I+ NL + N ++N  C+ G +  A  +   +  
Sbjct: 91  NKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 150

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G +P  +T+  LI G C KG I   ++A      +V  G   N++++ TLIDG CK   
Sbjct: 151 MGYNPNTITFTTLIKGLCLKGQI---HQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE 207

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
             AA+ +   +    +   VV Y+++I+G+C D  +++A  L  EM++ G+ PNVVT +A
Sbjct: 208 TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 267

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+GF     ++ A  LF+ +  + + P V T+N L+D +CK G++  A  + + M DRG
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P++ TY+ ++  L +   V+    ++ +L + G+R  + TY IL+  LC  GK + A 
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           ++ +++     +     +VTY V+  GFC+KG  ++A+ LL+++ E G IP+  TY++++
Sbjct: 388 NIFEDLLVKGYDI---TVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIK 444

Query: 515 EEMMEKG 521
             + +KG
Sbjct: 445 LSLFKKG 451



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 237/452 (52%), Gaps = 37/452 (8%)

Query: 72  SLVVAKKYPKIRSFLHMFVKNGKF---------------TSVSTIFHALSTCSDS----- 111
           S  V KK+P  +     F+KN  F               +S ST FH+ +   D+     
Sbjct: 22  SHFVPKKFPSFQ-----FLKNTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFN 76

Query: 112 -LCRN-----SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
            L R      +I  + ++ + VK+   H      K+    G+K ++++CN L+    + G
Sbjct: 77  CLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLG 136

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
                  V+ ++ +     N  +F  ++ GLC  G++++A +  + + +LG     ++Y 
Sbjct: 137 LIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYG 196

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LIDG CK   +G+   A  + + +    + PN V ++T+IDG CKD++++ A  ++ EM
Sbjct: 197 TLIDGLCK---VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 253

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            S GI+  VVTY++LI+G    GKL +AV L ++M++  +KP+V T N L++ FCK   +
Sbjct: 254 VSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKI 313

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  L D++ ++G  P+++TY++++DA CK  R++ A A+   + D+G+ P++ TY  L
Sbjct: 314 SYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTIL 373

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G +E  RNI  +L+  G    +VTY ++    CK G   +A +LL    KME+
Sbjct: 374 IDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLS---KMEE 430

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
               P+  TY ++     +KG+ + A  L  E
Sbjct: 431 NGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 183/333 (54%), Gaps = 6/333 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +L  L K+   +    + + M+  G+ P +V  NILI+ +C+ G I   +   +VF 
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAF---SVFA 146

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +++ G  PN +TF TLI G C    I  A+   +++ + G     ++Y +LI+GLC  G
Sbjct: 147 KILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVG 206

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   A+ L   +    ++PNVV  + +I+G CK K V  A  L+ ++  +G+SP+V+TY+
Sbjct: 207 ETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 266

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI  +   G+++DA  + N M+   + PDV T+N L+    + G +     +++E+ + 
Sbjct: 267 ALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDR 326

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +VTY+ ++ ALCK  +  KAV+LL    K++ +   PN+ TY +LI G C  GKL
Sbjct: 327 GQPPNIVTYSSILDALCKTHRVDKAVALLT---KLKDQGIRPNMHTYTILIDGLCTSGKL 383

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           EDA  +  +LL KG      TY ++     +KG
Sbjct: 384 EDARNIFEDLLVKGYDITVVTYIVMFYGFCKKG 416



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 3/264 (1%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N + +++    F  + ++  A+ +F  +         + +N ++  L         + L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M   G+KPN+V  N LIN FC+  L+  A  +F  I + G +P+ IT+ TLI   C +
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G++  A    + ++  G   +  +Y  LI GL + G      +++  +    ++  +V Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + ++  +CKD     A  L  EM     +   PN+VTY+ LI GF   GKL+DA  L N+
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMV---SKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           ++ + + P+  T+ I+ +   + G
Sbjct: 288 MISENIKPDVYTFNILVDVFCKSG 311



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 32/221 (14%)

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           S  K N++  ++    F     V+ A  LF+ +  Q  +P  I +N ++ +  K      
Sbjct: 46  SSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHT 105

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              +   M  RG+ P++   N LI    + G +    ++  +++  G     +T+  L+ 
Sbjct: 106 VLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIK 165

Query: 443 ALCKDGKSKKAVSL--------------------------------LDEMFKMEKEKKWP 470
            LC  G+  +A++                                 LD + +++ +   P
Sbjct: 166 GLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           N+V Y+ +I G C+   + DA  L +E++ KG+ PN  TY 
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 266


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 241/463 (52%), Gaps = 13/463 (2%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVK--NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
            H ++  +  P I  F   L   VK  N  +T+  ++ H L      +    +  ++L+ 
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLEL--KGITPTIVTFNILVN 102

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y    +    F  F +    G   + ++ N L+  +   GK ++  + +  +      L
Sbjct: 103 CYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHL 162

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  S+  ++NGLCK G+   A  +++ ++   V+  VV YNI+I+  CK   +   Y+  
Sbjct: 163 DQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQ-- 220

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++ +M+   I P+ VTFN+LI GFC    +  A  +F EM    I   V T++ L++ L
Sbjct: 221 -LYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C DG +  A  +   MM  G+ P+VVT ++L++G+C    V KA+ +F  +S  G++P  
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            +YN +I+   K   +++A ++   M  +G+ PD  TYN LI GL + G +     +++E
Sbjct: 340 HSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           + NNG+ A ++TYN L+  LCK+    KA++L+    K++ +   P++ TYN+LI G C+
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVK---KIKDQGIQPSMYTYNILIDGLCK 456

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            G+L++A  +  +LL KG   N  TY I+   + ++G   + E
Sbjct: 457 GGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE 499



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 202/358 (56%), Gaps = 6/358 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           + + V+  N ++ +L K+    D   +Y EM  +RI  ++ +FN ++ G C  G+L +A 
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +  +M    ++P V T++IL+D  CK G I +     AV   M++ G++P+ VT+++L+
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV---MMKQGVIPDVVTYSSLM 311

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+C    ++ A  VF  M   G+A    +YN +INGL     +DEA++L  EM   G+ 
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT N+LI+G CK   +  A  L D++   G+   ++TYN+LID  CK   ++ A A+
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              + D+G+ P + TYN LI GL + G ++  +++  +L+  G      TYNI++  LCK
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCK 491

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           +G   +A  LL    KME     P+ VTY  +I+   +K + E A  LL E++ +GL+
Sbjct: 492 EGLFNEAEVLLS---KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 211/376 (56%), Gaps = 8/376 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+      + K+++ + +  ++  +N ++N LCK   ++ A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M +  +SP VVT+N LI G+C    +G++ +A  +F +MV   I P+  TF+ L
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCV---VGQLKEAFGLFHEMVLKNINPDVYTFSIL 275

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CKD NI+ A  +   M   G+   VVTY+SL++G C+  ++++A  +   M   G+
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  + N +ING  K K+V++A  LF ++  +G++P  +TYN+LID  CK GR+  A+ 
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M + G+  D+ TYN LI  L +  +++    ++ ++ + G++  + TYNIL+  LC
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC 455

Query: 446 KDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G+ K A  +  D + K      W    TYN++I G C++G   +A  LL+++   G+I
Sbjct: 456 KGGRLKNAQDVFQDLLIKGYSVNAW----TYNIMINGLCKEGLFNEAEVLLSKMENNGII 511

Query: 505 PNQTTYQIVREEMMEK 520
           P+  TY+ +   +  K
Sbjct: 512 PDAVTYETIIRALFRK 527



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 8/295 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L H +V+    P + +F   +    K+G  T    +   +      +  + +    LM  
Sbjct: 256 LFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM--KQGVIPDVVTYSSLMDG 313

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y    + +     F      G+     S N ++  L K    ++   ++KEM  + I  +
Sbjct: 314 YCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD 373

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             ++N +++GLCK G+++ A  ++++M + G+   ++TYN LID  CK   I    KA A
Sbjct: 374 TVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID---KAIA 430

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + K + + GI P+  T+N LIDG CK   +  A  VF+++   G +    TYN +INGLC
Sbjct: 431 LVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLC 490

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
            +G  +EA  L  +M  +G+ P+ VT   +I    +K   EKA  L  ++  +GL
Sbjct: 491 KEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 249/465 (53%), Gaps = 19/465 (4%)

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC-RNS 116
           R +H   +  ++L     AK + +  S L      G   S S +F +L  C+ S C  N 
Sbjct: 102 RITHIYCMAAQIL---TQAKMHSQAMSLLKHLAMTG--FSCSAVFSSL-LCTISRCDSNP 155

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           ++ D+L+ AYVK  +      A     + G K+S  +CN +L ALV+ G+ + V +  KE
Sbjct: 156 LVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKE 215

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
              R+  L++ + N VLN +C  G L  A  ++  MKS  + P V+TYN ++  Y KK  
Sbjct: 216 GLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKK-- 272

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            G+   A  V +DM +NG+  +  T+N +ID  CK +  + A  + + M    +A    T
Sbjct: 273 -GRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECT 331

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+LI G   + K+  A+ + +EM+  GLKP++ T   LI+G+C+   +++A  +  ++ 
Sbjct: 332 YNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQ 391

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             G+ PS +TY+ +++     G + +AF++ ++M   G  PDV TY  L+ GL + G++ 
Sbjct: 392 VAGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLV 446

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             +  M+ +V+        T N L+  +C  G   +A+ L ++M  +      P+I TY 
Sbjct: 447 QAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTIN---FIPDIHTYT 503

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +L+ GFC+KGK+  A  LL  +LEKGL+P+  TY  + + ++++G
Sbjct: 504 ILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEG 548



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 197/377 (52%), Gaps = 7/377 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNK 204
           GL   +++   LL+ L+KEG+ +   Y+++E+  +  +  +  ++N ++NG  KAGKL+K
Sbjct: 529 GLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHK 588

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
               + DM    V P   +YNIL+ G+ KKG + +   +  ++KDMV  GI P  VT+  
Sbjct: 589 VEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSR---SIYLYKDMVRKGIKPTNVTYRL 645

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI G  K   I  A+K  ++M   GI    ++++ LIN      ++ +A+ L + M    
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY 705

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+  T +A+ING  +K  ++ +  +  D+ E GL P    Y  LI+A C+ G +  AF
Sbjct: 706 MSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAF 765

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            ++  M   G++P     + ++ GLS+ G VE    +   ++  GM   + T+  L+  L
Sbjct: 766 RLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGL 825

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+ K   A+ L      ME      ++VTYNVLI G C+   + DA  L  E+  KGL 
Sbjct: 826 CKEAKISDALHLKS---LMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLR 882

Query: 505 PNQTTYQIVREEMMEKG 521
           PN TTY  + E +   G
Sbjct: 883 PNVTTYTTLTEAIYGTG 899



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 225/495 (45%), Gaps = 65/495 (13%)

Query: 86  LHMF---VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY---VKNMKP------- 132
           +H+F   ++ G   S++T     +T  D  CRN  I + L + Y   V  +KP       
Sbjct: 349 IHIFNEMLRQGLKPSLAT----YTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSA 404

Query: 133 ------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
                 H  F  +     YG    V +   LLR L K G     +     +      ++ 
Sbjct: 405 MLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQ 464

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            + N +L G+C  G L++A D+ E M ++   P + TY IL+ G+C+KG   K+  A  +
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKG---KIVPAVIL 521

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLC 305
            + M+E G++P+ VT+  L+ G  K+  + AA  +F+E+    G+ A  + YNS++NG  
Sbjct: 522 LQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYL 581

Query: 306 VDGKLDE-----------------------------------AVALRDEMMASGLKPNVV 330
             GKL +                                   ++ L  +M+  G+KP  V
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T   LI G  K  ++E A    D +  +G+ P  ++++ LI+A+ ++ RM DA  + N M
Sbjct: 642 TYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM 701

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
               + P   TY+ +I GL R+  ++   +++ ++V +G+      Y  L+ A C+ G  
Sbjct: 702 KWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDI 761

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  L +EM  +      P  V  + +++G  + GK+E+   +   ++  G++P   T+
Sbjct: 762 NGAFRLKEEMTAL---GIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATF 818

Query: 511 QIVREEMMEKGFIPD 525
             +   + ++  I D
Sbjct: 819 TTLMHGLCKEAKISD 833



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 226/478 (47%), Gaps = 53/478 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + LH +VK G+F +   +   +        +   +I+ID L     K  +    +   KR
Sbjct: 264 TILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKL----CKMKRSTHAYLLLKR 319

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
                L     + N L++    E K     +++ EM R+ ++ +L ++  +++G C+ G 
Sbjct: 320 MRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGT 379

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A  ++ +M+  GV P  VTY+ +++G         +++A +V+ +M + G  P+  T
Sbjct: 380 IDEALRVLYEMQVAGVKPSEVTYSAMLNG--------SVHEAFSVYDNMEKYGCSPDVYT 431

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  L+ G CK  ++  A +    +     A    T N+L+ G+C  G LDEA+ L ++M+
Sbjct: 432 YRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMV 491

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI---------- 371
                P++ T   L++GFC+K  +  A +L   + E+GL P ++TY  L+          
Sbjct: 492 TINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVK 551

Query: 372 -------DAYCKEGRMEDAFA---MRNSMLDRG----------------VLPDVSTYNCL 405
                  +  CKEG   D  A   M N  L  G                V P+ ++YN L
Sbjct: 552 AASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNIL 611

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G  ++G++     +  ++V  G++   VTY +L+  L K G  + AV  LD   KM  
Sbjct: 612 MHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLD---KMVL 668

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           E  +P+ ++++VLI  F +K ++ DA  L N +    + P+  TY  +   ++ K ++
Sbjct: 669 EGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWL 726



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 38/350 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ +  ++ N ++   +K GK   VE    +M + ++  N  S+N +++G  K G L+++
Sbjct: 565 GMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRS 624

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + +DM   G+ P  VTY +LI G  K G I    K       MV  GI P+ ++F+ L
Sbjct: 625 IYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVK---FLDKMVLEGIYPDRLSFDVL 681

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL--------------------- 304
           I+ F +   +S A+++F  M    ++    TY+++INGL                     
Sbjct: 682 INAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGL 741

Query: 305 --------------CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                         C  G ++ A  L++EM A G+ P  V  ++++ G  K   VE+  +
Sbjct: 742 EPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGII 801

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +F  I   G+ P++ T+ TL+   CKE ++ DA  +++ M   G+  DV TYN LI GL 
Sbjct: 802 VFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLC 861

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +   V     +  E+ + G+R  + TY  L  A+   G++ +   LL+++
Sbjct: 862 KIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDI 911



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 162/327 (49%), Gaps = 8/327 (2%)

Query: 77  KKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           K YP   S+   +H  +K G  +   +I+         +   ++   +L+L   K+    
Sbjct: 600 KVYPNPASYNILMHGHIKKGHLSR--SIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIE 657

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  +   +    G+    LS + L+ A  ++ +  D   ++  MK   +  +  +++ ++
Sbjct: 658 IAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMI 717

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGL +   L  + D++ DM   G+ PK   Y  LI+  C+ G I   ++     ++M   
Sbjct: 718 NGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLK---EEMTAL 774

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI+P EV  ++++ G  K   +   + VF  +   G+   + T+ +L++GLC + K+ +A
Sbjct: 775 GIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDA 834

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L+  M + GLK +VVT N LI G CK + V  A  L++++  +GL P+V TY TL +A
Sbjct: 835 LHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEA 894

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVS 400
               GR  +   + N + DRG++P  +
Sbjct: 895 IYGTGRTLEGEKLLNDIEDRGLVPSYT 921



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 170/374 (45%), Gaps = 33/374 (8%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
            +K G+  + S +F  +  C + +  + I  + +M  Y+K  K H             + 
Sbjct: 544 LIKEGQVKAASYLFQEI-ICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVY 602

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +  S N L+   +K+G      Y+YK+M R+ I+    ++  ++ GL K G +  A   
Sbjct: 603 PNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKF 662

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIG------------------KMYKADA----- 245
           ++ M   G+ P  +++++LI+ + +K  +                   K Y A       
Sbjct: 663 LDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIR 722

Query: 246 ---------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                    V +DMVE+G+ P    +  LI+  C+  +I+ A ++ EEM + GI    V 
Sbjct: 723 KNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVA 782

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            +S++ GL   GK++E + +   ++ +G+ P + T   L++G CK+  +  A  L   + 
Sbjct: 783 DSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLME 842

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             GL   V+TYN LI   CK   + DA  +   M  +G+ P+V+TY  L   +   G   
Sbjct: 843 SCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTL 902

Query: 417 GVRNIMNELVNNGM 430
               ++N++ + G+
Sbjct: 903 EGEKLLNDIEDRGL 916



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 28/371 (7%)

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R + N   F+ ++N   K  ++  AS  +  M + G        N +++   +   IG+ 
Sbjct: 150 RCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVE---IGES 206

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
                  K+ +      +  T N +++  C + N+  A  +  +M S  +   V+TYN++
Sbjct: 207 KHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLP-NVITYNTI 265

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++     G+   A+ + ++M  +G++ +V T N +I+  CK K    A +L   +    L
Sbjct: 266 LHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNL 325

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P   TYNTLI  +  E +M  A  + N ML +G+ P ++TY  LI G  R G ++    
Sbjct: 326 APDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALR 385

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+   G++   VTY+ ++     +G   +A S+ D M   EK    P++ TY  L++
Sbjct: 386 VLYEMQVAGVKPSEVTYSAML-----NGSVHEAFSVYDNM---EKYGCSPDVYTYRNLLR 437

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIP 524
           G C+ G L  A   ++ ++      +Q T   +                 E+M+   FIP
Sbjct: 438 GLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIP 497

Query: 525 DIEGHMYNISG 535
           DI  +   +SG
Sbjct: 498 DIHTYTILLSG 508


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 210/407 (51%), Gaps = 41/407 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N ++    KEG       ++KEM +R I  +L ++N V++ LCKA  ++KA   +
Sbjct: 221 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 280

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M +  V P   TYN LI GY      G+  +A  VFK+M  + ILP+ VT + L+   
Sbjct: 281 RQMVNKRVLPNNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 337

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   I  A  VF+ M   G    V +YN ++NG    G L +   L D M+  G+ P+ 
Sbjct: 338 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 397

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N 
Sbjct: 398 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 457

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR------------------ 431
           M+D+GV PD   YNCLI G    G++   + +++E++NNGM                   
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517

Query: 432 -------------AGL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                         GL    V YN+L+   C  GK +KA+ + D M     E   PN+V 
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE---PNVVG 574

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           Y  L+ G+C+ G++++   L  E+L++G+ P+   Y I+ + + E G
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 232/478 (48%), Gaps = 27/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFV-------------------KNGKFTSVSTIFHALSTCS 109
           ++H+L  A+   K  +FL   V                     G++     +F  +    
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR--R 320

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            S+  + + + MLM +  K  K     + F      G    V S N +L     +G   D
Sbjct: 321 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 380

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           +  ++  M    I  +  +FN ++      G L+KA  I  +M+  GV P VVTY  +I 
Sbjct: 381 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 440

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C+   IGKM  A   F  M++ G+ P++  +N LI GFC   ++  A ++  E+ ++G
Sbjct: 441 ALCR---IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +V ++S+IN LC  G++ +A  + D  +  GL P+ V  N L++G+C    +EKA 
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 557

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML RG+ P    Y+ +I GL
Sbjct: 558 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G     +   +E+  +G+   + TYNI++  L K+    +A+ L  E+  M  +   
Sbjct: 618 FEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI-- 675

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            NI+T N +I G  Q  ++E+A  L   +    L+P+  TY I+   ++++G + + E
Sbjct: 676 -NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 732



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 49/415 (11%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +N+
Sbjct: 90  PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 149

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 150 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 206

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  PN V +NT+IDGF K+ +++ A  +F+EM   GI   +VTYNS+++ 
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 304 LC-----------------------------------VDGKLDEAVALRDEMMASGLKPN 328
           LC                                     G+  EAV +  EM    + P+
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VVT + L+   CK   +++AR +FD ++ +G +P V +YN +++ Y  +G + D   + +
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML  G+ PD  T+N LI   +  G ++    I NE+ ++G++  +VTY  ++ ALC+ G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K   A+   ++M     +   P+   YN LI+GFC  G L  A  L++E++  G+
Sbjct: 447 KMDDAMEKFNQMI---DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 498



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  ++N ++ G C 
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 479

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V ++ +I+  CK   +G++  A  +F   V  G+ P+
Sbjct: 480 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 536

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V +N L+DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  
Sbjct: 537 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  + +I+G  +      A++ F +++E G++  + TYN ++    K  
Sbjct: 597 EMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 656

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  ++ T N +I G+ +   VE  +++   +  + +   +VTY+
Sbjct: 657 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 716

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     PN    N +++   +K ++  A   L++
Sbjct: 717 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 772

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 773 IDERNFSLEHLTAMLLVDLFSSKG 796



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 40/368 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +  D G+     + N L++     G     + +  E+    + L++  F+ ++N
Sbjct: 451 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G++  A +I +   ++G+ P  V YN+L+DGYC    +GKM KA  VF  MV  G
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL---VGKMEKALRVFDAMVSAG 567

Query: 255 ILPNEVTFNTLIDGFCK----DENIS--------------------------------AA 278
           I PN V + TL++G+CK    DE +S                                A 
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           MK F EM   GIA  + TYN ++ GL  +   DEA+ L  E+ A  +K N++T N +I+G
Sbjct: 628 MK-FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
             + + VE+A+ LF  IS   L PSV+TY+ +I    KEG +E+A  M +SM + G  P+
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
               N ++  L ++  +      ++++         +T  +LV      G  ++ +  L 
Sbjct: 747 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLP 806

Query: 459 EMFKMEKE 466
             +    E
Sbjct: 807 AKYHFLAE 814


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 234/478 (48%), Gaps = 47/478 (9%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAF 139
           ++ +H  V  G     +T+   +      +D    N +++ +  L +V+           
Sbjct: 219 QTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVRE-----AARLV 273

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            R   +G   SV++   LLR L +  + ++       M  R  E+N+   N V+ G    
Sbjct: 274 DRMMMHGCTPSVVTYGFLLRGLCRTRQADEA----YAMLGRVPEVNVVMLNTVIRGCLAE 329

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GKL +A+++ E M S G  P V TYNIL+ G CK G  G   +   +  +M E G  PN 
Sbjct: 330 GKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR---MLDEMEEKGCAPNI 386

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT++TL+  FC++     A  + ++M + G +     YN +I  L  DGKLDEA+ L  E
Sbjct: 387 VTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQE 446

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M + G KP++ T N +I   C    +++A  +F ++ E+G+  + ITYNTLI A    GR
Sbjct: 447 MKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR 506

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            ++   + N M+  G   DV +YN LI  L +EGNV+    ++ E++  G++    +YN+
Sbjct: 507 WQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNM 566

Query: 440 LVGALCKDGKSKKAVSLLDEMF--------------------------------KMEKEK 467
           L+  LCK GK + A+ L  EM                                 K+  E 
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             P+IVTYN+LI   C+   L+DA+ LL++ +  G++PN+ T+ ++ +  + +   PD
Sbjct: 627 VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQPVNPD 684



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 206/462 (44%), Gaps = 84/462 (18%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           + +  S  S N +L  L +     D   +Y+ M R R+     +F      LC+ G+   
Sbjct: 139 FAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARD 198

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------- 237
           A  ++  M   G  P  V Y  +I     +GG+                           
Sbjct: 199 ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVL 258

Query: 238 -----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK----DE--------------- 273
                G + +A  +   M+ +G  P+ VT+  L+ G C+    DE               
Sbjct: 259 GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM 318

Query: 274 ------------NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
                        ++ A +++E MGS G    V TYN L++GLC  G+   AV + DEM 
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  PN+VT + L++ FC+  + + AR + D +S +G S +   YN +I A  K+G+++
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLD 438

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   M  +G  PD+ TYN +I  L     ++   +I   L+  G+ A  +TYN L+
Sbjct: 439 EAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLI 498

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
            AL   G+ ++ + L +EM         P ++V+YN LIK  C++G ++ +  LL E++ 
Sbjct: 499 HALLHSGRWQEGLRLANEMVL----HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554

Query: 501 KGLIPNQTTYQI----------VRE------EMMEKGFIPDI 526
           KG+ PN  +Y +          VR+      EM+ +G  PDI
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 596



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 162/344 (47%), Gaps = 35/344 (10%)

Query: 204 KASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEV 260
           +A  +++ M +   V+P   +YN ++    +         ADA+  ++ M+ + + P   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARAD-----CHADALLLYRRMLRDRVPPTTF 181

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF       C+      A+ +   M  HG     V Y ++I+ L   G + EA  L DEM
Sbjct: 182 TFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM 241

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G   +V T N ++ G C    V +A  L D +   G +PSV+TY  L+   C+  + 
Sbjct: 242 LLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301

Query: 381 EDAFAMRNSMLDRGVLPDVST--YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++A+AM       G +P+V+    N +I G   EG +     +   + + G    + TYN
Sbjct: 302 DEAYAM------LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYN 355

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+  LCK G+   AV +LDE   ME++   PNIVTY+ L+  FC+ G  +DA  +L+++
Sbjct: 356 ILMHGLCKLGRCGSAVRMLDE---MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412

Query: 499 LEKGLIPNQTTY--------------QIVR--EEMMEKGFIPDI 526
             KG   N   Y              + +R  +EM  +G  PDI
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDI 456



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 9/283 (3%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            + P+  ++N ++    + +  + A+ ++  M    +     T+      LC  G+  +A
Sbjct: 140 AVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDA 199

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +AL   M   G  P+ V    +I+    +  V +A  L D++   G +  V T+N ++  
Sbjct: 200 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLG 259

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G + +A  + + M+  G  P V TY  L+ GL R    +    ++  +        
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPE----VN 315

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDAN 492
           +V  N ++     +GK  +A     E+++M   K  P ++ TYN+L+ G C+ G+   A 
Sbjct: 316 VVMLNTVIRGCLAEGKLARAT----ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAV 371

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            +L+E+ EKG  PN  TY  +       G   D    +  +S 
Sbjct: 372 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSA 414


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/437 (32%), Positives = 234/437 (53%), Gaps = 29/437 (6%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK--RAGDYG 146
           F K G+     ++F  +   S  L  N+  ++ L+L   +  +     + F+  +AG + 
Sbjct: 35  FCKGGQMHQAVSVFSDMK--SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF- 91

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L +S  S N LLR     G+   +E+ +KEMK   +E +L+S++ +L+ L  +G++ +A 
Sbjct: 92  LPTSA-SHNILLRGFFMAGR--AIEF-FKEMKASGVEPDLESYHILLSALSDSGRMAEAH 147

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M     SP ++TYN+L+DGYCK   IG+ Y+A ++ K++++ G  PN  T++ +I
Sbjct: 148 ALFSAMT---CSPDIMTYNVLMDGYCK---IGQTYEAQSLMKEILKAGYEPNVFTYSIII 201

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           + +CK + +  A +VF +M         VT+N+LI G C  G L++A+ L  EM   G K
Sbjct: 202 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 261

Query: 327 PNVVTSNALINGFCKKKL-VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             +VT N LI+  CKK+  V  A  LF+ +   GL+P+++TYN+LI  + +  R  D   
Sbjct: 262 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLR 319

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G  PDV TYNCLI+GL     VE  + + N +        + T+N L+  LC
Sbjct: 320 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLC 376

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
              K ++A ++LD M         P++ T+N +I  FC+ G + DA  ++ ++L+ G  P
Sbjct: 377 AQKKVEEARNILDRM-------TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYP 429

Query: 506 NQ-TTYQIVREEMMEKG 521
           N  TTY +       KG
Sbjct: 430 NTYTTYALAHGIQSSKG 446



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 213/428 (49%), Gaps = 38/428 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+   ++L+  + K  + H     F      GL  +  + N LL  L + G+      ++
Sbjct: 24  NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF 83

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM+         S N +L G   AG+   A +  ++MK+ GV P + +Y+IL+      
Sbjct: 84  REMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDS 140

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +M +A A+F  M  +   P+ +T+N L+DG+CK      A  + +E+   G    V
Sbjct: 141 G---RMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 194

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY+ +IN  C   K++EA  +  +M+ S   PN VT N LI GFCK  ++E A  LF +
Sbjct: 195 FTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE 254

Query: 355 ISEQGLSPSVITYNTLIDAYCKE-GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           + + G   +++TYNTLID+ CK+ G +  A  + N +   G+ P + TYN LI G S   
Sbjct: 255 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA 314

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           N +G+R ++  +   G +  ++TYN L+  LC   + + A  L + M         PN+ 
Sbjct: 315 N-DGLR-LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM------ACAPNVT 366

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEM 517
           T+N LI+G C + K+E+A  +L+ +      P+ TT+                  V ++M
Sbjct: 367 TFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDM 422

Query: 518 MEKGFIPD 525
           ++ GF P+
Sbjct: 423 LKHGFYPN 430



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 187/346 (54%), Gaps = 15/346 (4%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K +    ++KE+       N  ++N ++ G CK G++++A  +  DMKS G+ P   T N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+ G C+   IG+M  A  +F++M     LP   + N L+ GF        A++ F+EM
Sbjct: 65  TLLLGLCE---IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEM 118

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            + G+   + +Y+ L++ L   G++ EA AL   M  S   P+++T N L++G+CK    
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQT 175

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A+ L  +I + G  P+V TY+ +I+ YCK  ++E+A+ +   M++   +P+  T+N L
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD-GKSKKAVSLLDEMFKME 464
           IAG  + G +E    +  E+   G +A +VTYN L+ +LCK  G    AV L +   K+E
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN---KLE 292

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                P IVTYN LI+GF ++    D   LL  +  +G  P+  TY
Sbjct: 293 GAGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITY 336



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 176/363 (48%), Gaps = 27/363 (7%)

Query: 59  ASHSLLLTG--------RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST 107
           ASH++LL G             +  +   P + S+   L     +G+      +F A+ T
Sbjct: 96  ASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM-T 154

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS  +   ++++D     Y K  + +      K     G + +V + + ++    K  K 
Sbjct: 155 CSPDIMTYNVLMD----GYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKV 210

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E+   V+ +M       N  +FN ++ G CKAG L  A  +  +M+ +G    +VTYN L
Sbjct: 211 EEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTL 270

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           ID  CKK G   +Y A  +F  +   G+ P  VT+N+LI GF   E  +  +++   M +
Sbjct: 271 IDSLCKKRG--GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHA 326

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    V+TYN LI+GLC   ++++A  L + M  +   PNV T N LI G C +K VE+
Sbjct: 327 EGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA---PNVTTFNFLIRGLCAQKKVEE 383

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           AR + D ++    +P + T+NT+I A+CK G M DA  +   ML  G  P+  T   L  
Sbjct: 384 ARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAH 439

Query: 408 GLS 410
           G+ 
Sbjct: 440 GIQ 442



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 144/279 (51%), Gaps = 9/279 (3%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  +FK+++     PN  T+N LI GFCK   +  A+ VF +M S G+     T N+L+
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC  G++  A+ L  EM A    P   + N L+ GF    +  +A   F ++   G+ 
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGF---FMAGRAIEFFKEMKASGVE 124

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P + +Y+ L+ A    GRM +A A+ ++M      PD+ TYN L+ G  + G     +++
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           M E++  G    + TY+I++   CK  K ++A  +     KM +    PN VT+N LI G
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF---MKMIESNCVPNAVTFNTLIAG 238

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           FC+ G LEDA  L  E+ + G      TY  + + + +K
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 277



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 132/248 (53%), Gaps = 9/248 (3%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+++F+E+ +   A    TYN LI G C  G++ +AV++  +M +SGL PN  T N L+ 
Sbjct: 9   ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 68

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G C+   +  A  LF ++      P+  ++N L+  +   GR  + F     M   GV P
Sbjct: 69  GLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFF---KEMKASGVEP 125

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D+ +Y+ L++ LS  G +     + + +  +     ++TYN+L+   CK G++ +A SL+
Sbjct: 126 DLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLM 182

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            E+ K   E   PN+ TY+++I  +C+  K+E+A  +  +++E   +PN  T+  +    
Sbjct: 183 KEILKAGYE---PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239

Query: 518 MEKGFIPD 525
            + G + D
Sbjct: 240 CKAGMLED 247



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 9/205 (4%)

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K D+A+ L  E++A    PN  T N LI GFCK   + +A  +F D+   GL P+  T N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+   C+ G+M  A  +   M     LP  +++N L+ G    G          E+  +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   L +Y+IL+ AL   G+  +A +L   M         P+I+TYNVL+ G+C+ G+ 
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAM------TCSPDIMTYNVLMDGYCKIGQT 175

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV 513
            +A  L+ E+L+ G  PN  TY I+
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSII 200


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 222/414 (53%), Gaps = 41/414 (9%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+VK  K++ V  + K+M+   I  +L +FN V+N  C   +++ A  I+
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P  VT   L++G+C++    ++  A ++   MVE G  P+ V +N +ID  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRN---RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------------------------ 305
           CK + ++ A   F+E+   GI   VVTY +L+NGLC                        
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260

Query: 306 -----------VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                       +GK+ EA  L +EM+   + P++VT ++LING C    +++A  +FD 
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G    V++YNTLI+ +CK  R+ED   +   M  RG++ +  TYN LI G  + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+  +   +++   G+   + TYNIL+G LC +G+ +KA+ + ++M K E +    +IVT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD---LDIVT 437

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           Y  +I+G C+ GK+E+A  L   L  KGL P+  TY  +   +  KG + ++E 
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 15/446 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L   VK  K+  V ++   +      + L   +I+I+   
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             +    +  L      +    G +   ++   L+    +  +  D   +  +M     +
Sbjct: 132 CCF----QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ ++N +++ LCK  ++N A D  ++++  G+ P VVTY  L++G C      +   A
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---RWSDA 244

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +  DM++  I PN +T++ L+D F K+  +  A ++FEEM    I   +VTY+SLING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  ++DEA  + D M++ G   +VV+ N LINGFCK K VE    LF ++S++GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TYNTLI  + + G ++ A    + M   G+ PD+ TYN L+ GL   G +E    I  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++    M   +VTY  ++  +CK GK ++A SL      +  +   P+IVTY  ++ G C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF---CSLSLKGLKPDIVTYTTMMSGLC 481

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTT 509
            KG L +   L  ++ ++GL+ N  T
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 149/272 (54%), Gaps = 3/272 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F DMV++   P+ V FN L+    K +     + + ++M   GI   + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +IN  C   ++  A+++  +M+  G +P+ VT  +L+NGFC++  V  A  L D + E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P ++ YN +ID+ CK  R+ DAF     +  +G+ P+V TY  L+ GL         
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++++++   +   ++TY+ L+ A  K+GK  +A  L +EM +M  +   P+IVTY+ L
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID---PDIVTYSSL 301

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I G C   ++++AN + + ++ KG + +  +Y
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 3/241 (1%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +D  ++ A+ +F +M        +V +N L++ +    K D  ++L  +M   G++ ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +IN FC    V  A  +   + + G  P  +T  +L++ +C+  R+ DA ++ + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G  PD+  YN +I  L +   V    +   E+   G+R  +VTY  LV  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL +M    K+K  PN++TY+ L+  F + GK+ +A  L  E++   + P+  TY
Sbjct: 242 SDAARLLSDMI---KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 511 Q 511
            
Sbjct: 299 S 299



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D KL++A+ L  +M+ S   P++V  N L++   K K  +    L   +   G+   + T
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N +I+ +C   ++  A ++   ML  G  PD  T   L+ G  R   V    ++++++V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G +  +V YN ++ +LCK  +   A     E+   E++   PN+VTY  L+ G C   
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSS 239

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  LL+++++K + PN  TY  + +  ++ G
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 241/440 (54%), Gaps = 14/440 (3%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           I  + HM   N  F+ ++ I   +    D++  N++I  + +   VK     L F     
Sbjct: 110 INCYCHMAEMNFAFSMMAKIL-KMGYEPDTITFNTLIKGLCLNGKVKEA---LHFHDHVL 165

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           A  + L     S   L+  L K G+      + +++  + +++N+  +N +++ LCK   
Sbjct: 166 ALGFHLDQ--FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKL 223

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +  A ++   M +  +SP VVT++ LI G+C    +G++ +A  +F++MV   I P+  T
Sbjct: 224 VIDAYELYSQMIAKKISPDVVTFSALIYGFCI---VGQLEEAFGLFREMVLKNINPDYYT 280

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FN L+D  CK+ N+  A  +   M   G+   VVTY+SL++G C+  ++++A  + + + 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  PN  +   +INGFCK K+V++A  LF+D+  +G++P  +TYN+LID  CK GR+ 
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A+ + + M D G   ++ TYNCLI  L +  +V+    ++ ++ + G++  + T+NIL+
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 442 GALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK G+ K A  +  ++  K      W    TYN+++ G C++G  ++A  LL+++ +
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAW----TYNIMVNGLCKEGLFDEAEALLSKMDD 516

Query: 501 KGLIPNQTTYQIVREEMMEK 520
            G+IP+  TY+ + + +  K
Sbjct: 517 NGIIPDAVTYETLIQALFHK 536



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 218/409 (53%), Gaps = 6/409 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  Y    + +  F    +    G +   ++ N L++ L   GK ++  + +  +  
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
               L+  S+  ++NGLCK G+   A  ++  +    V   VV YN +ID  CK   +  
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            Y+   ++  M+   I P+ VTF+ LI GFC    +  A  +F EM    I     T+N 
Sbjct: 227 AYE---LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L++ LC +G L  A  +   MM  G+ PNVVT ++L++G+C    V KA+ + + IS+ G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            +P+  +Y T+I+ +CK   +++A ++ N M  +G+ PD  TYN LI GL + G +    
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +++E+ +NG  A + TYN L+ ALCK+    +A++L+    K++ +   P++ T+N+LI
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVK---KIKDQGIQPDMYTFNILI 460

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            G C+ G+L++A  +  +LL KG   N  TY I+   + ++G   + E 
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 201/358 (56%), Gaps = 6/358 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K +V+  N ++ +L K     D   +Y +M  ++I  ++ +F+ ++ G C  G+L +A 
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +  +M    ++P   T+NIL+D  CK+G +     A  +   M++ G++PN VT+++L+
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKG---AKNMLVVMMKEGVMPNVVTYSSLM 320

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+C    ++ A  V   +   G A    +Y ++ING C    +DEA++L ++M   G+ 
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT N+LI+G CK   +  A  L D++ + G   ++ TYN LIDA CK   ++ A A+
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              + D+G+ PD+ T+N LI GL + G ++  +++  +L++ G      TYNI+V  LCK
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           +G   +A +LL    KM+     P+ VTY  LI+    K + E A  LL E++ + ++
Sbjct: 501 EGLFDEAEALLS---KMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 208/384 (54%), Gaps = 20/384 (5%)

Query: 78  KYPKIRSFLHMFVK-NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           K  + R+ L M  K +GK   ++ + +  +T  DSLC++ ++ID               +
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMY--NTIIDSLCKHKLVID--------------AY 228

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E + +     +   V++ + L+      G+ E+   +++EM  + I  +  +FN +++ L
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G L  A +++  M   GV P VVTY+ L+DGYC    + ++ KA  V   + + G  
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL---VNQVNKAKHVLNTISQMGAA 345

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  ++ T+I+GFCK + +  A+ +F +M   GIA   VTYNSLI+GLC  G++  A  L
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM  +G   N+ T N LI+  CK   V++A  L   I +QG+ P + T+N LI   CK
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR+++A  +   +L +G   +  TYN ++ GL +EG  +    +++++ +NG+    VT
Sbjct: 466 VGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVT 525

Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
           Y  L+ AL    +++KA  LL EM
Sbjct: 526 YETLIQALFHKDENEKAEKLLREM 549



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 140/258 (54%), Gaps = 3/258 (1%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +GI P+  TFN LI+ +C    ++ A  +  ++   G     +T+N+LI GLC++GK+ E
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+   D ++A G   +  +   LING CK      A  +   I  + +  +V+ YNT+ID
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           + CK   + DA+ + + M+ + + PDV T++ LI G    G +E    +  E+V   +  
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              T+NILV ALCK+G  K A ++L     M KE   PN+VTY+ L+ G+C   ++  A 
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNML---VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 493 GLLNELLEKGLIPNQTTY 510
            +LN + + G  PN  +Y
Sbjct: 334 HVLNTISQMGAAPNAHSY 351



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 21/346 (6%)

Query: 61  HSLLLTGRLLHSLVVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFH--ALSTCSDSLCR 114
           H L++    L+S ++AKK  P + +F   ++ F   G+      +F    L   +     
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 115 NSIIIDMLM----LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
            +I++D L     L   KNM   +  E        G+  +V++ + L+       +    
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKE--------GVMPNVVTYSSLMDGYCLVNQVNKA 332

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           ++V   + +     N  S+  ++NG CK   +++A  +  DM+  G++P  VTYN LIDG
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            CK G I   ++   +  +M +NG   N  T+N LID  CK+ ++  A+ + +++   GI
Sbjct: 393 LCKSGRISYAWE---LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              + T+N LI GLC  G+L  A  +  ++++ G   N  T N ++NG CK+ L ++A  
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           L   + + G+ P  +TY TLI A   +   E A  +   M+ R V+
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK--KAVSLLDEMFKMEKEKKWPN 471
           +V+ V +  N L+     + ++ +N ++G+L K   +    A+SL     ++E     P+
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSR---RLEFHGITPD 102

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I T+N+LI  +C   ++  A  ++ ++L+ G  P+  T+
Sbjct: 103 IFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 234/458 (51%), Gaps = 13/458 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS--LCRNSIIIDMLMLA 125
           RLLH        P I  F  +     K    ST+  +LST  DS  +  N   +++L+ +
Sbjct: 46  RLLH----MHPPPSIVDFAKLLTSIAKMKHYSTVL-SLSTQMDSFGVPPNVYTLNILINS 100

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           +    +    F    +    G +    +   L+R L  EGK  +  +++ +M     + N
Sbjct: 101 FCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPN 160

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + ++  ++NGLCK G  + A  ++  M+     P VV Y  +ID  CK   + + +    
Sbjct: 161 VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN--- 217

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  MV  GI P+  T+ +L+   C          +  +M +  I   VV ++++++ LC
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 277

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +GK+ EA  + D M+  G++P+VVT   L++G C +  +++A  +FD +  +G +P VI
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +Y TLI+ YCK  +++ A  +   M  +  +PD  TYN L+ GL   G ++    + +E+
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G    LVTY+IL+ +LCK+   ++A++LL     +E     P+I  YN++I G C+ 
Sbjct: 398 VARGQMPDLVTYSILLDSLCKNCHLEEAMALLK---AIEASNLNPDIQVYNIIIDGMCRA 454

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G+LE A  L + L  KGL P+  TY I+   + ++G +
Sbjct: 455 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 492



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 186/352 (52%), Gaps = 17/352 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DSLC++  + +               F  F +    G+   + +   L+ AL    +++ 
Sbjct: 204 DSLCKDRQVTE--------------AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH 249

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  +  +M   +I  ++  F+ V++ LCK GK+ +A +I++ M   GV P VVTY  L+D
Sbjct: 250 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C +    +M +A  VF  MV  G  P+ +++ TLI+G+CK   I  AM +FEEM    
Sbjct: 310 GHCLQ---SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                 TYN+L++GLC  G+L +A+AL  EM+A G  P++VT + L++  CK   +E+A 
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAM 426

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   I    L+P +  YN +ID  C+ G +E A  + +++  +G+ P V TYN +I GL
Sbjct: 427 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
            + G +     +  E+  N       TYN +     ++ ++ +A+ LL+EM 
Sbjct: 487 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 538



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 22/354 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F  +L  + K    +    +   M S GV P V T NILI+ +C    +G  +   +V  
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAF---SVLA 115

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +++ G  P+  TF TLI G C +  I  A+ +F++M   G    VVTY +LINGLC  G
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
               A+ L   M     +P+VV   ++I+  CK + V +A  LF  +  QG+SP + TY 
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 235

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +L+ A C     +    + N M++  +LPDV  ++ ++  L +EG V     I++ ++  
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   +VTY  L+   C   +  +AV + D M +   +   P++++Y  LI G+C+  K+
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR---KGFAPDVISYTTLINGYCKIHKI 352

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDI 526
           + A  L  E+  K  IP+  TY  +                  EM+ +G +PD+
Sbjct: 353 DKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 148/295 (50%), Gaps = 19/295 (6%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V F  L+    K ++ S  + +  +M S G+   V T N LIN  C   ++  A ++
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G +P+  T   LI G C +  + +A  LFD + ++G  P+V+TY TLI+  CK
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G    A  +  SM      PDV  Y  +I  L ++  V    N+ +++V  G+   + T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  LV ALC   + K   +LL++M      K  P++V ++ ++   C++GK+ +A+ +++
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMV---NSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            ++++G+ P+  TY                  V + M+ KGF PD+  +   I+G
Sbjct: 291 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 154/331 (46%), Gaps = 28/331 (8%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI------IIDML 122
           L+H+L    ++  + + L+  V N K      IF   ST  D+LC+         I+DM+
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMV-NSKILPDVVIF---STVVDALCKEGKVTEAHEIVDMM 292

Query: 123 M--------LAYVKNMKPHL-------GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           +        + Y   M  H          + F      G    V+S   L+    K  K 
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 352

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +   Y+++EM R+    +  ++N +++GLC  G+L  A  +  +M + G  P +VTY+IL
Sbjct: 353 DKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 412

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +D  CK      + +A A+ K +  + + P+   +N +IDG C+   + AA  +F  + S
Sbjct: 413 LDSLCKNC---HLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   V TYN +I+GLC  G L+EA  L  EM  +   P+  T N +  GF +     +
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           A  L +++  +G S  V T   L++    +G
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A++  + ++     P++V    L+    K K       L   +   G+ P+V T N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+++C   R+  AF++   +L  G  PD +T+  LI GL  EG +    ++ +++++ G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY  L+  LCK G +  A+ LL     ME+    P++V Y  +I   C+  ++ 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLR---SMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L ++++ +G+ P+  TY
Sbjct: 214 EAFNLFSQMVGQGISPDIFTY 234


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 224/438 (51%), Gaps = 11/438 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ + + G+      + + +    D+   N +I  + +   + +         F    
Sbjct: 224 TMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPD-----ALAVFDDML 278

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G   SV++ + LL A  KE  +     +  EM+ +  E ++ ++N ++N +C  G ++
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A +I+ ++ S G  P  VTY  ++   C   G  +  + + +  +M  N   P+EVTFN
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLC---GSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T++   C+   +  A++V + M  HG  A +VTY+S+++GLC  G++D+AV L   + + 
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP+ +    ++ G C  +  E+A  L  ++      P  +T+NT++ + C++G ++ A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M + G  PD+ TYNC+I GL  E  ++    ++++L + G +  +VT+N L+  
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC   + + A  L   M  M +    P+ +T+N +I   CQKG L  A   L  + E G 
Sbjct: 576 LCGVDRWEDAEQL---MANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 504 IPNQTTYQIVREEMMEKG 521
           +PN +TY IV + +++ G
Sbjct: 633 VPNSSTYSIVVDALLKAG 650



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 218/448 (48%), Gaps = 12/448 (2%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           L   V+ G+      +F ++++     C   +  ++L+     + +       F      
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AAL 213

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  ++V++ N ++    + G+ ED   +   M       +  +FN ++  LC  G++  A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + +DM   G SP VVTY+IL+D  CK+ G     +A A+  +M   G  P+ VT+N L
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESG---YRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+  C + ++  A+ +   + SHG     VTY  ++  LC   +  E   L  EM ++  
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ VT N ++   C++ LV++A  + D +SE G    ++TY++++D  C  GR++DA  
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + +   G  PD   Y  ++ GL      E    +M E++ +      VT+N +V +LC
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G   +A+ ++++M    +    P+IVTYN +I G C +  ++DA  LL++L   G  P
Sbjct: 508 QKGLVDRAIRVVEQM---SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +  T+  + + +       D E  M N+
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANM 592



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 197/382 (51%), Gaps = 13/382 (3%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G K   ++   +L++L    ++++VE +  EM       +  +FN ++  LC+ G +++
Sbjct: 350 HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDR 409

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++++ M   G    +VTY+ ++DG C    +G++  A  +   +   G  P+ + + T
Sbjct: 410 AIEVVDHMSEHGCVADIVTYSSILDGLCD---VGRVDDAVELLSRLKSYGCKPDTIAYTT 466

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++ G C  E    A ++  EM         VT+N+++  LC  G +D A+ + ++M  +G
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P++VT N +I+G C +  ++ A  L  D+   G  P ++T+NTL+   C   R EDA 
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  +M+     PD  T+N +I  L ++G +      +  +  NG      TY+I+V AL
Sbjct: 587 QLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDAL 646

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K GK++ A+ LL  M         P+++TYN +I    + GK+E+A  LL  ++  GL 
Sbjct: 647 LKAGKAQAALELLSGM-----TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701

Query: 505 PNQTTYQ-----IVREEMMEKG 521
           P+ TTY+     + RE+  ++ 
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRA 723



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 201/389 (51%), Gaps = 8/389 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E      ++G  + +++ + +L  L   G+ +D   +   +K    + +  ++  VL 
Sbjct: 410 AIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 469

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC   +  +A ++M +M      P  VT+N ++   C+KG + +  +   V + M ENG
Sbjct: 470 GLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR---VVEQMSENG 526

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ VT+N +IDG C +  I  AM++  ++ S G    +VT+N+L+ GLC   + ++A 
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L   MM S   P+ +T N +I   C+K L+ +A      ++E G  P+  TY+ ++DA 
Sbjct: 587 QLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDAL 646

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K G+ + A  + + M +    PD+ TYN +I+ L++ G +E   +++  +V+NG+    
Sbjct: 647 LKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDT 704

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L   +C++  + +AV +L    +++     P+   YN ++ GFC+  + + A   
Sbjct: 705 TTYRSLAYGVCREDGTDRAVRMLR---RVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFI 523
              ++  G +P+++TY I+ E +   G +
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLL 790



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 169/347 (48%), Gaps = 43/347 (12%)

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC-------NQLLRALVKEGKFEDVEYVYKE 176
           +AY   +K     E ++RA +   +     C       N ++ +L ++G  +    V ++
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M       ++ ++N +++GLC    ++ A +++ D++S G  P +VT+N L+ G C   G
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC---G 578

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG------- 289
           + +   A+ +  +M+ +   P+E+TFNT+I   C+   ++ A++  + M  +G       
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638

Query: 290 --------IAAG------------------VVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
                   + AG                  ++TYN++I+ L   GK++EA+ L   M+++
Sbjct: 639 YSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSN 698

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P+  T  +L  G C++   ++A  +   + + GLSP    YN ++  +C++ R + A
Sbjct: 699 GLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLA 758

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
                 M+  G +PD STY  L+  L+  G ++  + ++  L + G+
Sbjct: 759 IDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 23/289 (7%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LC  S I D                E        G K  +++ N LL+ L    ++ED
Sbjct: 539 DGLCNESCIDD--------------AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +   M R     +  +FN V+  LC+ G L +A + ++ M   G  P   TY+I++D
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644

Query: 230 GYCKKGGIGKMYKADAVFKDM--VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
              K G      KA A  + +  + NG  P+ +T+NT+I    K   +  A+ +   M S
Sbjct: 645 ALLKAG------KAQAALELLSGMTNGT-PDLITYNTVISNLTKAGKMEEALDLLRVMVS 697

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
           +G+     TY SL  G+C +   D AV +   +  +GL P+    N ++ GFC+ +  + 
Sbjct: 698 NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDL 757

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           A   F  +   G  P   TY  L++A    G +++A  +  S+   GVL
Sbjct: 758 AIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +  + N L+ +L +         V  +M +  I+ +  +F  ++NGLC  G++ +
Sbjct: 115 FGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKE 174

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++  +M      P  VT+ IL+D  CKKG + +   A  VF+ M E G+ PN  T+N 
Sbjct: 175 AVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSE---ARCVFETMTEKGVEPNIYTYNA 231

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L++G+C    ++ A KVFE M   G A  V +Y+ LING C   ++DEA AL  +M    
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L PN VT N L+ G C    + +A+ LF  +   G+ P++ TY+ L+D  CK G +E+A 
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  SM +R + PD+  YN LI G+   G +E  + + ++L  NG+R  + TYNI++  L
Sbjct: 352 KLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K+G S +A  L     KME +   P+  +YNV+I+GF Q      A  L++E++ +   
Sbjct: 412 LKEGLSDEAYKLFR---KMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468

Query: 505 PNQTTYQIV 513
            + +T++++
Sbjct: 469 ADSSTFKML 477



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 186/330 (56%), Gaps = 6/330 (1%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           L  + K  + +    +   M   GV+    T NILI+  C+   +  ++ A +V   M +
Sbjct: 93  LGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCR---LSHIHFAVSVLSKMFK 149

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI P+ VTF TLI+G C +  I  A+++F EM         VT+  L++ LC  G + E
Sbjct: 150 LGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSE 209

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  + + M   G++PN+ T NAL+NG+C +  +  A  +F+ +  +G +PSV +Y+ LI+
Sbjct: 210 ARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILIN 269

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK  R+++A A+   M ++ ++P+  TYN L+ GL    ++   + +  ++ ++GM  
Sbjct: 270 GYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLP 329

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L TY+IL+  LCK G  ++A+ LL  M   ++ K  P+IV YN+LI+G    GKLE A 
Sbjct: 330 NLRTYSILLDGLCKHGHLEEALKLLTSM---QERKLEPDIVLYNILIQGMFIAGKLEVAK 386

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            L ++L   G+ P+  TY I+ + ++++G 
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLLKEGL 416



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 158/285 (55%), Gaps = 3/285 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K+G   +   V++ M  + +E N+ ++N ++NG C   ++N AS + E M   G
Sbjct: 197 LVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P V +Y+ILI+GYCK   I +   A A+   M E  ++PN VT+NTL+ G C   ++ 
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDE---AKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++F++M S G+   + TY+ L++GLC  G L+EA+ L   M    L+P++V  N LI
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G      +E A+ LF  +   G+ PSV TYN +I    KEG  ++A+ +   M D G L
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFL 433

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           PD  +YN +I G  +  +      +++E+V     A   T+ +L+
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 145/283 (51%), Gaps = 3/283 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A F  M+     P+ V     +    K +  S  + +  +M   G+A    T N LIN
Sbjct: 70  AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILIN 129

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC    +  AV++  +M   G++P+ VT   LING C +  +++A  LF++++ +   P
Sbjct: 130 SLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMP 189

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + +T+  L+D  CK+G + +A  +  +M ++GV P++ TYN L+ G      +     + 
Sbjct: 190 NTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF 249

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +V  G    + +Y+IL+   CK  +  +A +LL +M   EKE   PN VTYN L++G 
Sbjct: 250 EIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQM--SEKE-LIPNTVTYNTLMQGL 306

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           C    L +A  L  ++   G++PN  TY I+ + + + G + +
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 3/244 (1%)

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D  I  AM  F  M         V     +  +    +    V+L ++M   G+  N  T
Sbjct: 64  DIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LIN  C+   +  A  +   + + G+ P  +T+ TLI+  C EGR+++A  + N M 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R  +P+  T+  L+  L ++G V   R +   +   G+   + TYN L+   C   +  
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A  + + M     +   P++ +Y++LI G+C+  ++++A  LL ++ EK LIPN  TY 
Sbjct: 244 DASKVFEIMV---GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYN 300

Query: 512 IVRE 515
            + +
Sbjct: 301 TLMQ 304



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 3/227 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   SV S + L+    K  + ++ + +  +M  + +  N  ++N ++ GLC A  L +A
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M S G+ P + TY+IL+DG CK G + +  K   +   M E  + P+ V +N L
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK---LLTSMQERKLEPDIVLYNIL 372

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G      +  A ++F ++ ++GI   V TYN +I GL  +G  DEA  L  +M   G 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            P+  + N +I GF + +    A  L D++  +  S    T+  L+D
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 211/404 (52%), Gaps = 35/404 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N ++    KEG       ++KEM +R I  +L ++N V++ LCKA  ++KA   +
Sbjct: 218 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 277

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M +  V P   TYN LI GY      G+  +A  VFK+M  + ILP+ VT + L+   
Sbjct: 278 RQMVNKRVLPNNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 334

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   I  A  VF+ M   G    V +YN ++NG    G L +   L D M+  G+ P+ 
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 394

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N 
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+D+GV PD   YNCLI G    G++   + +++E++NNGM   +V ++ ++  LCK G+
Sbjct: 455 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514

Query: 450 SKKAVSLLDEMF----------------------KMEKEKKW----------PNIVTYNV 477
              A ++ D                         KMEK  +           PN+V Y  
Sbjct: 515 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           L+ G+C+ G++++   L  E+L++G+ P+   Y I+ + + + G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 233/478 (48%), Gaps = 27/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFV-------------------KNGKFTSVSTIFHALSTCS 109
           ++H+L  A+   K  +FL   V                     G++     +F  +    
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR--R 317

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            S+  + + + MLM +  K  K     + F      G    V S N +L     +G   D
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           +  ++  M    I  +  +FN ++      G L+KA  I  +M+  GV P VVTY  +I 
Sbjct: 378 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C+   IGKM  A   F  M++ G+ P++  +N LI GFC   ++  A ++  E+ ++G
Sbjct: 438 ALCR---IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +V ++S+IN LC  G++ +A  + D  +  GL P+ V  + L++G+C    +EKA 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML RG+ P    Y+ +I GL
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G     +   +E+  +G+   + TYNI++  L K+    +A+ L  E+  M  +   
Sbjct: 615 FQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI-- 672

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            NI+T N +I G  Q  ++E+A  L   +    L+P+  TY I+   ++++G + + E
Sbjct: 673 -NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 729



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 49/415 (11%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +N+
Sbjct: 87  PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 146

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 147 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 203

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  PN V +NT+IDGF K+ +++ A  +F+EM   GI   +VTYNS+++ 
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 304 LC-----------------------------------VDGKLDEAVALRDEMMASGLKPN 328
           LC                                     G+  EAV +  EM    + P+
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VVT + L+   CK   +++AR +FD ++ +G +P V +YN +++ Y  +G + D   + +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML  G+ PD  T+N LI   +  G ++    I NE+ ++G++  +VTY  ++ ALC+ G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K   A+   ++M     +   P+   YN LI+GFC  G L  A  L++E++  G+
Sbjct: 444 KMDDAMEKFNQMI---DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  ++N ++ G C 
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V ++ +I+  CK   +G++  A  +F   V  G+ P+
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 533

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V ++ L+DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 593

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  + +I+G  +      A+V F +++E G++  + TYN ++    K  
Sbjct: 594 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR 653

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  ++ T N +I G+ +   VE  +++   +  + +   +VTY+
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 713

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     PN    N +++   +K ++  A   L++
Sbjct: 714 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 38/367 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +  D G+     + N L++     G     + +  E+    + L++  F+ ++N
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G++  A +I +   ++G+ P  V Y++L+DGYC    +GKM KA  VF  MV  G
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL---VGKMEKALRVFDAMVSAG 564

Query: 255 ILPNEVTFNTLIDGFCK----DENIS-------------------------------AAM 279
           I PN V + TL++G+CK    DE +S                                A 
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
             F EM   GIA  + TYN ++ GL  +   DEA+ L  E+ A  +K N++T N +I+G 
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            + + VE+A+ LF  IS   L PSV+TY+ +I    KEG +E+A  M +SM + G  P+ 
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
              N ++  L ++  +      ++++         +T  +LV      G  ++ +  L  
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804

Query: 460 MFKMEKE 466
            +    E
Sbjct: 805 KYHFLAE 811


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 222/414 (53%), Gaps = 41/414 (9%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+VK  K++ V  + K+M+   I  +L +FN V+N  C   +++ A  I+
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P  VT   L++G+C++    ++  A ++   MVE G  P+ V +N +ID  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRN---RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------------------------ 305
           CK + ++ A   F+E+   GI   VVTY +L+NGLC                        
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260

Query: 306 -----------VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                       +GK+ EA  L +EM+   + P++VT ++L+NG C    +++A  +FD 
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G    V++YNTLI+ +CK  R+ED   +   M  RG++ +  TYN LI G  + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+  +   +++   G+   + TYNIL+G LC +G+ +KA+ + ++M K E +    +IVT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD---LDIVT 437

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           Y  +I+G C+ GK+E+A  L   L  KGL P+  TY  +   +  KG + ++E 
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 228/446 (51%), Gaps = 15/446 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L   VK  K+  V ++   +      + L   +I+I+   
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             +    +  L      +    G +   ++   L+    +  +  D   +  +M     +
Sbjct: 132 CCF----QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ ++N +++ LCK  ++N A D  ++++  G+ P VVTY  L++G C      +   A
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---RWSDA 244

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +  DM++  I PN +T++ L+D F K+  +  A ++FEEM    I   +VTY+SL+NG
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+  ++DEA  + D M++ G   +VV+ N LINGFCK K VE    LF ++S++GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TYNTLI  + + G ++ A    + M   G+ PD+ TYN L+ GL   G +E    I  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++    M   +VTY  ++  +CK GK ++A SL      +  +   P+IVTY  ++ G C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF---CSLSLKGLKPDIVTYTTMMSGLC 481

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTT 509
            KG L +   L  ++ ++GL+ N  T
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 149/272 (54%), Gaps = 3/272 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  +F DMV++   P+ V FN L+    K +     + + ++M   GI   + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +IN  C   ++  A+++  +M+  G +P+ VT  +L+NGFC++  V  A  L D + E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P ++ YN +ID+ CK  R+ DAF     +  +G+ P+V TY  L+ GL         
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++++++   +   ++TY+ L+ A  K+GK  +A  L +EM +M  +   P+IVTY+ L
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID---PDIVTYSSL 301

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + G C   ++++AN + + ++ KG + +  +Y
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 3/241 (1%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +D  ++ A+ +F +M        +V +N L++ +    K D  ++L  +M   G++ ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +IN FC    V  A  +   + + G  P  +T  +L++ +C+  R+ DA ++ + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G  PD+  YN +I  L +   V    +   E+   G+R  +VTY  LV  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL +M    K+K  PN++TY+ L+  F + GK+ +A  L  E++   + P+  TY
Sbjct: 242 SDAARLLSDMI---KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 511 Q 511
            
Sbjct: 299 S 299



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D KL++A+ L  +M+ S   P++V  N L++   K K  +    L   +   G+   + T
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N +I+ +C   ++  A ++   ML  G  PD  T   L+ G  R   V    ++++++V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G +  +V YN ++ +LCK  +   A     E+   E++   PN+VTY  L+ G C   
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSS 239

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  LL+++++K + PN  TY  + +  ++ G
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 55/439 (12%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LCR S + D +                 +  G      SV+S N L+    K G  + 
Sbjct: 243 DGLCRQSRLQDAVTF--------------LRETGGEEFGPSVVSFNALMSGFCKMGSVDV 288

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            +  +  M +  +  ++ S+N +L+GLC AG + +A +   DM++ GV P +VTYNIL +
Sbjct: 289 AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN 348

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+   G I   +K   V + M+ NG+ P+ VT+  LI G C+  NI  + K+ E+M S G
Sbjct: 349 GFRILGLISGAWK---VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE--- 346
           +   +VTY  L++ LC  G++DEAV L  EM   GLKP+++T + LI+G CK+  VE   
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 347 --------------------------------KARVLFDDISEQGLSPSVITYNTLIDAY 374
                                           +A++ FD +++  ++  +I YN +ID Y
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K G + +A      ++++G+ P + T+N LI G  ++G +     +++ +  +G+    
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY  L+   C++G      S+ D + +ME +   P  +TY V++KG C++G+L ++  L
Sbjct: 586 VTYTTLMNGYCEEGDMH---SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL 642

Query: 495 LNELLEKGLIPNQTTYQIV 513
           L  +  +GL P+Q TY  V
Sbjct: 643 LKYMYARGLFPDQITYNTV 661



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 194/362 (53%), Gaps = 6/362 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK  +L+ + L+  L K G  E+   +Y+EM  +RI  N    + +++GL + G +++A
Sbjct: 440 GLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + +    V+ +++ YNI+IDGY K G IG+  ++   +K ++E GI P  VTFN+L
Sbjct: 500 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS---YKQIIEKGISPTIVTFNSL 556

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFCK   ++ A+K+ + +  HG+    VTY +L+NG C +G +     +  EM A  +
Sbjct: 557 IYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 616

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP  +T   ++ G CK+  + ++  L   +  +GL P  ITYNT+I ++CK   ++ AF 
Sbjct: 617 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 676

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N ML   + P   TYN LI GL   GN++    ++  L +  +R   V Y  ++ A C
Sbjct: 677 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 736

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G  + A+    +M +   E    +I  Y+ +I   C++  + DA      +L  G+ P
Sbjct: 737 AKGDVQNALVFFHQMVERGFE---VSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 793

Query: 506 NQ 507
           +Q
Sbjct: 794 DQ 795



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 205/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   +++   L+    + G  E+   + ++M  + ++L++ ++  +L+ LCK+G++++A
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M+ +G+ P ++TY++LI G CK+G + +   A  ++++M    I PN    + +
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE---AIELYEEMCSKRIYPNSFVCSAI 486

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  +   IS A   F+ +    +A  ++ YN +I+G    G + EAV    +++  G+
Sbjct: 487 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 546

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P +VT N+LI GFCKK  + +A  L D I   GL P+ +TY TL++ YC+EG M   F 
Sbjct: 547 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 606

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M + M  + + P   TY  ++ GL +EG +     ++  +   G+    +TYN ++ + C
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 666

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K    +KA  L ++M +   +   P+ VTYNVLI G C  G L+DA+ LL  L ++ +  
Sbjct: 667 KAHDLQKAFQLHNQMLQHSLQ---PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 723

Query: 506 NQTTYQIVREEMMEKG 521
            +  Y  + +    KG
Sbjct: 724 TKVAYTTIIKAHCAKG 739



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 206/384 (53%), Gaps = 14/384 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK S+++   LL +L K G+ ++   +  EM+   ++ +L +++ +++GLCK G + +A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ E+M S  + P     + +I G  +KG I +   A   F  + ++ +    + +N +
Sbjct: 465 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE---AQMYFDSVTKSDVAEEIILYNIM 521

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+ K  NI  A++ ++++   GI+  +VT+NSLI G C  GKL EAV L D +   GL
Sbjct: 522 IDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGL 581

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P  VT   L+NG+C++  +     +  ++  + + P+ ITY  ++   CKEGR+ ++  
Sbjct: 582 VPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQ 641

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG+ PD  TYN +I    +  +++    + N+++ + ++   VTYN+L+  LC
Sbjct: 642 LLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 701

Query: 446 KDGKSKKA----VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             G  K A    V+L D+  ++ K       V Y  +IK  C KG +++A    ++++E+
Sbjct: 702 VYGNLKDADRLLVTLQDQSIRLTK-------VAYTTIIKAHCAKGDVQNALVFFHQMVER 754

Query: 502 GLIPNQTTYQIVREEMMEKGFIPD 525
           G   +   Y  V   + ++  I D
Sbjct: 755 GFEVSIRDYSAVINRLCKRNLITD 778



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 201/406 (49%), Gaps = 29/406 (7%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR--------IELNLDSF------ 189
           +YG + S +S   +   + ++G+ +++  V  +M             EL  +SF      
Sbjct: 108 EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLN 167

Query: 190 NFVLNGLC----KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           N V + L     +A  ++ A  ++  MK L +   + TYN L+        +  +Y    
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN--- 224

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
              ++  +G+  NE T   LIDG C+   +  A+    E G       VV++N+L++G C
Sbjct: 225 ---EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +D A +    M+  GL P+V + N L++G C    +E+A    +D+   G+ P ++
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN L + +   G +  A+ +   ML  G+ PD+ TY  LI G  + GN+E    +  ++
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           ++ G++  +VTY +L+ +LCK G+  +AV LL EM   E     P+++TY+VLI G C++
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM---EVIGLKPDLLTYSVLIHGLCKR 458

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           G +E+A  L  E+  K + PN      +   + EKG I   E  MY
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS--EAQMY 502



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 197/379 (51%), Gaps = 33/379 (8%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED----MKSLGVSPKVVT 223
            D  +V  +MK   +++++ ++N +L  L       + +DIM D    +K+ GV     T
Sbjct: 185 HDALFVLAKMKVLNLQVSIATYNSLLYNL-------RHTDIMWDVYNEIKASGVPQNEYT 237

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
             ILIDG C++    ++  A    ++       P+ V+FN L+ GFCK  ++  A   F 
Sbjct: 238 NPILIDGLCRQS---RLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            M  +G+   V +YN L++GLCV G ++EA+   ++M   G++P++VT N L NGF    
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILG 354

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           L+  A  +   +   GL+P ++TY  LI  +C+ G +E++F ++  ML +G+   + TY 
Sbjct: 355 LISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYT 414

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L++ L + G ++    +++E+   G++  L+TY++L+  LCK G  ++A+ L +EM   
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC-- 472

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------- 512
             ++ +PN    + +I G  +KG + +A    + + +  +      Y I           
Sbjct: 473 -SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531

Query: 513 ---VR--EEMMEKGFIPDI 526
              VR  ++++EKG  P I
Sbjct: 532 GEAVRSYKQIIEKGISPTI 550



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 148/294 (50%), Gaps = 3/294 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            ++K+  + G+  ++++ N L+    K+GK  +   +   +K   +     ++  ++NG 
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ G ++   D++ +M++  + P  +TY +++ G CK+G   +++++  + K M   G+ 
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG---RLHESVQLLKYMYARGLF 652

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+++T+NT+I  FCK  ++  A ++  +M  H +    VTYN LINGLCV G L +A  L
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 712

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              +    ++   V    +I   C K  V+ A V F  + E+G   S+  Y+ +I+  CK
Sbjct: 713 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 772

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
              + DA      ML  G+ PD      ++    R G+   V  I   ++  G+
Sbjct: 773 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 826



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 183/397 (46%), Gaps = 8/397 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           LLH + V    P + ++   +H   K G       ++  +  CS  +  NS +   ++  
Sbjct: 432 LLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM--CSKRIYPNSFVCSAIISG 489

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             +          F       +   ++  N ++    K G   +    YK++  + I   
Sbjct: 490 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + +FN ++ G CK GKL +A  +++ +K  G+ P  VTY  L++GYC++G +  M+    
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD--- 606

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +  +M    I P ++T+  ++ G CK+  +  ++++ + M + G+    +TYN++I   C
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 666

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
               L +A  L ++M+   L+P+ VT N LING C    ++ A  L   + +Q +  + +
Sbjct: 667 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKV 726

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y T+I A+C +G +++A    + M++RG    +  Y+ +I  L +   +   +     +
Sbjct: 727 AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMM 786

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +G+        +++ A  + G       +   M K
Sbjct: 787 LTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIK 823



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 127/253 (50%), Gaps = 3/253 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++   L+    +EG    +  +  EM+ + I+    ++  V+ GLCK G+L++
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +  +++ M + G+ P  +TYN +I  +CK   + K ++   +   M+++ + P+ VT+N 
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ---LHNQMLQHSLQPSPVTYNV 695

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+G C   N+  A ++   +    I    V Y ++I   C  G +  A+    +M+  G
Sbjct: 696 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            + ++   +A+IN  CK+ L+  A+  F  +   G+ P       +++A+ + G     F
Sbjct: 756 FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 815

Query: 385 AMRNSMLDRGVLP 397
            +   M+  G+LP
Sbjct: 816 EIFAMMIKCGLLP 828


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 241/507 (47%), Gaps = 70/507 (13%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           RLL S+   K+YP + S  +     G    V T+                  ++L+ ++ 
Sbjct: 74  RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL------------------NILINSFC 115

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
              +    F    +    G +    +   L+R L  EGK  D  +++ +M     + N+ 
Sbjct: 116 HLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 175

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY------ 241
           ++  ++NGLCK G  N A  ++  M+     P VV Y  +ID  CK   + + +      
Sbjct: 176 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 235

Query: 242 --------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
                                         +   M+ + I+P+ V F+T++D  CK+  I
Sbjct: 236 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 295

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
           + A  V + M   G+   VVTYN+L++G C+  ++DEAV + D M+ +G  PNV++ N L
Sbjct: 296 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 355

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING+CK + ++KA  LF+++ ++ L P+ +TYNTL+   C  GR++DA A+ + M+  G 
Sbjct: 356 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQ 414

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PD++TY  L+  L ++ +++    ++  +  + M   +  Y I++  +C+ G+ + A  
Sbjct: 415 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR- 514
           +      +  +   PN+ TY ++I G C++G L++AN L  E+   G  P+  TY  +  
Sbjct: 475 IFS---NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 531

Query: 515 ---------------EEMMEKGFIPDI 526
                          +EM+ +GF  D+
Sbjct: 532 GLLQNKEALRAIQLLQEMLARGFSADV 558



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 7/403 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S +  N+LL ++ K  ++  V  +  +M    I  ++ + N ++N
Sbjct: 53  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 112

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +L  A  ++  +  LG  P   T+  LI G C +G IG    A  +F  M+  G
Sbjct: 113 SFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD---ALHLFDKMIGEG 169

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN VT+ TLI+G CK  N +AA+++   M        VV Y S+I+ LC D ++ EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +M+  G+ P++ T  +LI+  C     +    L + +    + P V+ ++T++DA 
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TYN L+ G   +  ++    + + +V+NG    +
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++YN L+   CK  +  KA  L +EM + E     PN VTYN L+   C  G+L+DA  L
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKE---LIPNTVTYNTLMHX-CHVGRLQDAIAL 405

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            +E++  G IP+  TY+I+ + + +K  + +    +  I G++
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 448



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 203/391 (51%), Gaps = 21/391 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DSLC++  + +               F  F +    G+   + +   L+ +L    +++ 
Sbjct: 217 DSLCKDRQVTE--------------AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKH 262

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  +  +M   +I  ++  F+ V++ LCK GK+ +A D+++ M   GV P VVTYN L+D
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 322

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C +    +M +A  VF  MV NG  PN +++NTLI+G+CK + +  A  +FEEM    
Sbjct: 323 GHCLQS---EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +    VTYN+L++  C  G+L +A+AL  EM+A G  P++ T   L++  CKK  +++A 
Sbjct: 380 LIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 438

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   I    + P +  Y  +ID  C+ G +E A  + +++  +G+ P+V TY  +I GL
Sbjct: 439 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            R G ++    +  E+  NG      TYN +   L ++ ++ +A+ LL EM         
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML---ARGFS 555

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
            ++ T  +L++  C     +    +L+E ++
Sbjct: 556 ADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 15/283 (5%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  +  N      + FNTL D          A+  F  M         V +N L+  +  
Sbjct: 32  FSSLSHNRFHSKSLNFNTLDD----------ALSSFNRMLHMHPPPSTVDFNRLLTSIAK 81

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +     +L ++M + G+ P+V T N LIN FC    +  A  +   I + G  P   T
Sbjct: 82  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTAT 141

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI   C EG++ DA  + + M+  G  P+V TY  LI GL + GN      ++  + 
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
               +  +V Y  ++ +LCKD +  +A +L     KM  +   P+I TY  LI   C   
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS---KMVGQGISPDIFTYTSLIHSLCNLC 258

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           + +    LLN+++   ++P+   +  V + + ++G I   E H
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI--TEAH 299


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 216/414 (52%), Gaps = 39/414 (9%)

Query: 144 DYGLKS----SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           DY ++S    + + CN+++   V+  + +    +Y++M+ RRI LN+ SFN ++   C  
Sbjct: 95  DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK------------MYKADAVF 247
            KL+ +      +  LG  P VVT+N L+ G C +  I +              +A A+F
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MVE G+ P  +TFNTLI+G C +  +  A  +  +M   G+   VVTY +++NG+C  
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A+ L  +M  + +KP+VV  +A+I+  CK      A+ LF ++ E+G++P+V TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +ID +C  GR  DA  +   M++R + PDV T+N LI+   +EG +     + +E+++
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +    VTYN ++   CK  +   A  + D M         P++VT+N +I  +C+  +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDVYCRAKR 447

Query: 488 LEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
           +++   LL E+  +GL+ N TTY                Q + +EM+  G  PD
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 223/420 (53%), Gaps = 45/420 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + GL   V++ N L+  L  EG+  +   +  +M  + + +++ ++  ++NG+CK
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--VFKDMVENGIL 256
            G    A +++  M+   + P VV Y+ +ID  CK G     + +DA  +F +M+E GI 
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG-----HHSDAQYLFSEMLEKGIA 328

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  T+N +IDGFC     S A ++  +M    I   V+T+N+LI+    +GKL EA  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM+   + P+ VT N++I GFCK    + A+ +FD ++    SP V+T+NT+ID YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             R+++   +   +  RG++ + +TYN LI G     N+   +++  E++++G+    +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEK---------------------EKKW------ 469
            NIL+   C++ K ++A+ L  E+ +M K                     ++ W      
Sbjct: 505 CNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 470 ------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                 P++ TYNV+I GFC K  + DAN L +++ + G  P+ +TY  +    ++ G I
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G   D +Y++ EM  + I  N+ ++N +++G C  G+ + A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P V+T+N LI    K+G   K+++A+ +  +M+   I P+ VT+N++I
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFCK      A  +F+ M S      VVT+N++I+  C   ++DE + L  E+   GL 
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N  T N LI+GFC+   +  A+ LF ++   G+ P  IT N L+  +C+  ++E+A  +
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +    +  D   YN +I G+ +   V+   ++   L  +G+   + TYN+++   C 
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC- 583

Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               K A+S  + +F KM+     P+  TYN LI+G  + G+++ +  L++E+   G   
Sbjct: 584 ---GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 506 NQTTYQIVRE 515
           +  T ++V +
Sbjct: 641 DAFTIKMVAD 650



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 176/331 (53%), Gaps = 18/331 (5%)

Query: 135 GFEAFKRAGDYG----------LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           GF +F R  D            +   VL+ N L+ A VKEGK  + E +  EM  R I  
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N ++ G CK  + + A    + M  L  SP VVT+N +ID YC+   + +  +  
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ-- 453

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + +++   G++ N  T+NTLI GFC+ +N++AA  +F+EM SHG+    +T N L+ G 
Sbjct: 454 -LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + KL+EA+ L + +  S +  + V  N +I+G CK   V++A  LF  +   G+ P V
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYN +I  +C +  + DA  + + M D G  PD STYN LI G  + G ++    +++E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           + +NG      T   +V  L  DG+  K+ S
Sbjct: 633 MRSNGFSGDAFTIK-MVADLITDGRLDKSFS 662



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 20/295 (6%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DA+  F  MV +      V  N +I  F +      A+ ++ +M    I   + ++N LI
Sbjct: 89  DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
              C   KL  +++   ++   G +P+VVT N L++G C +  + +A             
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208

Query: 350 ---VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
               LFD + E GL+P VIT+NTLI+  C EGR+ +A A+ N M+ +G+  DV TY  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G+ + G+ +   N+++++    ++  +V Y+ ++  LCKDG    A  L  EM    ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML---EK 325

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              PN+ TYN +I GFC  G+  DA  LL +++E+ + P+  T+  +    +++G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 69/283 (24%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A+   D M+ S      V  N +I  F +    + A  L+  +  + +  ++ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST---------------------------- 401
           LI  +C   ++  + +    +   G  PDV T                            
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 402 ----------------------YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
                                 +N LI GL  EG V     ++N++V  G+   +VTY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +V  +CK G +K A++LL    KME+    P++V Y+ +I   C+ G   DA  L +E+L
Sbjct: 267 IVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 500 EKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
           EKG+ PN  TY                Q +  +M+E+   PD+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+ F +N K      +F  +      L  +++  ++++    K  K    ++ F     
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G++  V + N ++     +    D   ++ +MK    E +  ++N ++ G  KAG+++K
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 205 ASDIMEDMKSLGVSPKVVTYNILID 229
           + +++ +M+S G S    T  ++ D
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMVAD 650


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 234/471 (49%), Gaps = 11/471 (2%)

Query: 43  PVLILRYFCWSTKELRASHSLL-LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSV--S 99
           P L+L +F WS   L  S         L  SL  A  YP+    L   ++      +  S
Sbjct: 99  PKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLS 158

Query: 100 TIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           ++  ALS       R  +++D+L+  Y K  +   G E      D GL  S+  CN LL+
Sbjct: 159 SVHRALSGSDQG--RRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLK 216

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L++    + +  V   M+   I  ++ +++ ++   CK   L  A  ++E+M+  G S 
Sbjct: 217 DLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL 276

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            VVTYN LI G C+ G I + +      K+M + G++P+  T+  +I+G CK      A 
Sbjct: 277 NVVTYNTLIGGLCRAGAIEEAF---GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAK 333

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            + +EM   G+   VV Y++LI+G    G  DEA  +  EM A+G++PN +T + LI G 
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           CK   + +A  +   +++ G     +TYN +I+ + ++   E+AF + N M   G+ P+V
Sbjct: 394 CKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNV 453

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TY+ +I GL + G  E    ++ +++ +G++     Y  L+   C++G    A   L  
Sbjct: 454 YTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK- 512

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             KM +E   P++  YN LI G    GK+++A    +E+LEKG  PN  TY
Sbjct: 513 --KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTY 561



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 224/442 (50%), Gaps = 8/442 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++   K G+      +   +S C+  L  N ++   L+  +++       F+  K   
Sbjct: 318 AIINGLCKRGRPDQAKCLLDEMS-CA-GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMS 375

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++ + ++ + L+R L K G+      + K+M +     +  ++N V+ G  +     
Sbjct: 376 AAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKE 435

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++ +M+  G+SP V TY+I+I+G C+   IG+  +A  + + M+ +G+ PN   + 
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQ---IGESERASGLLEQMIADGLKPNAFVYA 492

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G+C++ + S A +  ++M    +   +  YNSLI GL   GK+DEA+   DEM+  
Sbjct: 493 PLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEK 552

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G +PN  T   LI+G+     +EKA  L   +   GL+P+   Y  +++ Y K   +E  
Sbjct: 553 GFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKV 612

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            +   SML++G++PD   Y  +I  LS  G+++   ++++ +  NG+    + Y  L+  
Sbjct: 613 SSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISG 672

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK    +KAV LLDEM K   E   P I  YN LI GFC+   +  A  + N ++ KGL
Sbjct: 673 FCKAADMEKAVGLLDEMAKKGIE---PGISCYNALIDGFCKSDDISHARNIFNSIICKGL 729

Query: 504 IPNQTTYQIVREEMMEKGFIPD 525
            PN  TY  + +   + G I D
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRD 751



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 211/417 (50%), Gaps = 8/417 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           +D L  N+ +   L+  Y +     L  E  K+     L   +   N L+  L   GK +
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           +    Y EM  +  + N  ++  +++G   AG L KA  ++  M + G++P    Y  ++
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQIL 600

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           +GY K      + K  +  K M+E G++P+   +  +I       ++ AA+ V   +  +
Sbjct: 601 EGYFKSD---NLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN 657

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+    + Y SLI+G C    +++AV L DEM   G++P +   NALI+GFCK   +  A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R +F+ I  +GL P+ +TY TLID YCK G + DA  + N ML  GV PD   Y+ L AG
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            S  G+++    I  E++  G  A + ++N LV   CK GK ++ V  L  M  M+K+  
Sbjct: 778 CSNSGDLQQALFITEEMIARGY-AIISSFNTLVHGFCKRGKLQETVKFLHVM--MDKD-I 833

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVREEMMEKGFIP 524
            P+++T   ++ G  + GKL +A+ +  EL +K      T +   +  +M+ +G +P
Sbjct: 834 VPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVP 890



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 167/344 (48%), Gaps = 35/344 (10%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           D+F  +   LC AG   +A+ +++ M     +P +V              +  +++A   
Sbjct: 121 DAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLV--------------LSSVHRA--- 163

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                + G  P  V  + L+D + K   +    +V   M   G+A  +   N L+  L  
Sbjct: 164 -LSGSDQGRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLR 220

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              LD    +R  M  +G+ P+V T + LI  +CK + +E A+ + +++ E G S +V+T
Sbjct: 221 ADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVT 280

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI   C+ G +E+AF  +  M D G++PD  TY  +I GL + G  +  + +++E+ 
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   +V Y+ L+    + G + +A  ++ E   M      PN +TY+ LI+G C+ G
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE---MSAAGVQPNKITYDNLIRGLCKLG 397

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           ++  A+ +L ++ + G + +  TY +V            IEGH+
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLV------------IEGHL 429



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 129/269 (47%), Gaps = 25/269 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL    L    L+    K    E    +  EM ++ IE  +  +N +++G CK+  ++ A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I   +   G+ P  VTY  LIDGYCK G I     A  ++ +M+  G+ P+   ++ L
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDI---RDAIDLYNEMLTEGVAPDAFVYSVL 774

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
             G     ++  A+ + EEM + G A  + ++N+L++G C  GKL E V     MM   +
Sbjct: 775 AAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDI 833

Query: 326 KPNVVTSNALINGFCKKKLVEKARV--------------------LFDDISEQGLSPSVI 365
            P+++T   ++ G  +   + +A                      LF D+  QGL P  +
Sbjct: 834 VPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDV 893

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            +N +I ++CK+G ++ A  + ++++ +G
Sbjct: 894 IHN-MIQSHCKQGYLDKALMLHDALVAKG 921


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 244/484 (50%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLM 123
           R+L  ++    YP  R   S +H + ++G +     +   +  C    C+   ++ ++L+
Sbjct: 98  RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG---CQPGYVVYNILI 154

Query: 124 LAYVKNMKP-----HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
                + +P      L  +A+    + G+  + ++ +   R L   GKFE    V +EM 
Sbjct: 155 GGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMM 214

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +    +  +++ V+  LC A K+ KA  + ++MK  G++P V  Y  LID +CK G I 
Sbjct: 215 SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIE 274

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              +A   F +M  +G  PN VT+  LI  + K   +S A +V+E M S G    +VTY 
Sbjct: 275 ---QARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGL-----------------KPNVVTSNALINGFCK 341
           +LI+GLC  GK+++A  +   M    +                 +PNV T  AL++G CK
Sbjct: 332 ALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++AR L   +S +G  P+ + Y+ LID  CK G++++A  +  +ML+ G  P+V T
Sbjct: 392 AYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYT 451

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++    ++++++ N     +V Y  ++  LCK GK+ +A  L   M 
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL---MV 508

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ME++   PN+VTY  +I GF + G++E    LL ++  KG  PN  TY+++       G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568

Query: 522 FIPD 525
            + +
Sbjct: 569 LLDE 572



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 27/405 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ F+     G+   V     L+ +  K G  E     + EM+R     N+ ++  +++
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIH 300

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              K+ K++KA+++ E M S G +P +VTY  LIDG CK G   K+ KA  ++K M +  
Sbjct: 301 AYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAG---KIEKASQIYKIMKKEN 357

Query: 255 IL-----------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           +                  PN  T+  L+DG CK   +  A  + + M   G     V Y
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           ++LI+G C  GKLDEA  +   M+  G  PNV T ++LI+   K K ++ A  +   + E
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
              +P+V+ Y  +ID  CK G+ ++A+ +   M ++G  P+V TY  +I G  + G VE 
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYN 476
              ++ ++ + G     VTY +L+   C  G   +A  LL+EM    K+  WP ++  Y 
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM----KQTYWPRHVAGYR 593

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +I+GF    +   +  L  E+ E   +P    Y+++ +  ++ G
Sbjct: 594 KVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAG 636



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 176/407 (43%), Gaps = 38/407 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            +++  L +   FE+       M+      N+ ++  +L G     KL +   I+  M +
Sbjct: 46  TKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMIT 105

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P    +N L+  YC+ G     YK   + K MV+ G  P  V +N LI G C  E 
Sbjct: 106 EGCYPSPRIFNSLVHAYCRSGDYAYAYK---LLKKMVQCGCQPGYVVYNILIGGICSSEE 162

Query: 275 -----ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                +  A K + EM   G+    V  ++    LC  GK ++A  +  EMM+ G  P+ 
Sbjct: 163 PGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDT 222

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T + +I   C    VEKA  LF ++   G++P V  Y TLID++CK G +E A    + 
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G  P+V TY  LI    +   V     +   +++ G    +VTY  L+  LCK GK
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 450 SKKAVSLLDEMFKMEKE--------------KKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            +KA  +   M K   E                 PN+ TY  L+ G C+  ++++A  LL
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402

Query: 496 NELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
             +  +G  PN   Y                Q V   M+E G+ P++
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNV 449



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 31/355 (8%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  +++GLC+A    +A D +  M++    P V+TY IL+ G   K  +G+  +   +  
Sbjct: 45  YTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKR---ILS 101

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD- 307
            M+  G  P+   FN+L+  +C+  + + A K+ ++M   G   G V YN LI G+C   
Sbjct: 102 MMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSE 161

Query: 308 --GK--LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
             GK  LD A     EM+ +G+  N V  +      C     EKA  +  ++  +G  P 
Sbjct: 162 EPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPD 221

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TY+ +I   C   ++E AF +   M   G+ PDV  Y  LI    + G +E  RN  +
Sbjct: 222 TSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFD 281

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGF 482
           E+  +G    +VTY  L+ A  K  K  KA    +E+++M   K   PNIVTY  LI G 
Sbjct: 282 EMERDGCAPNVVTYTALIHAYLKSRKVSKA----NEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           C+ GK+E A+ +               Y+I+++E +E   IPD++ H   + G S
Sbjct: 338 CKAGKIEKASQI---------------YKIMKKENVE---IPDVDMHFRVVDGAS 374



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 178/464 (38%), Gaps = 127/464 (27%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +  F K G        F  +    D    N +    L+ AY+K+ K     E ++   
Sbjct: 262 TLIDSFCKAGFIEQARNWFDEME--RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL-----------------NL 186
             G   ++++   L+  L K GK E    +YK MK+  +E+                 N+
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++  +++GLCKA ++ +A D+++ M   G  P  V Y+ LIDG CK G   K+ +A  V
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG---KLDEAQEV 436

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  M+E G  PN  T+++LID   KD+ +  A+KV  +M  +  A  VV Y  +I+GLC 
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496

Query: 307 DGKLDEA-----------------------------------VALRDEMMASGLKPNVVT 331
            GK DEA                                   + L  +M + G  PN VT
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556

Query: 332 SNALINGFCKKKLVEKARVLFDD---------------------------------ISEQ 358
              LIN  C   L+++A  L ++                                 ISE 
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISEN 616

Query: 359 GLSPSVITYNTLIDAYCKEGRME------------------------------------- 381
              P    Y  LID + K GR+E                                     
Sbjct: 617 DSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKAD 676

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            AF +   M+ RG +P++S    LI GL R    E    +++ +
Sbjct: 677 KAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 129/342 (37%), Gaps = 62/342 (18%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   G   +E T        CK      A+ + E+          V Y  +I+GLC    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +EA+     M AS   PNV+T   L+ G   K+ + + + +   +  +G  PS   +N+
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE----------------- 412
           L+ AYC+ G    A+ +   M+  G  P    YN LI G+                    
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 413 -----------------------GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
                                  G  E   N++ E+++ G      TY+ ++G LC   K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            +KA  L  E   M++    P++  Y  LI  FC+ G +E A    +E+   G  PN  T
Sbjct: 238 VEKAFQLFQE---MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVT 294

Query: 510 YQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           Y                  V E M+ KG  P+I  +   I G
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 256/529 (48%), Gaps = 59/529 (11%)

Query: 1   PFCSANSTIEDITELIRN---HHWSKLK--------NTDPNTV-------ILQLFNSDAD 42
           P C   ST+  +  L+ +   HH++  +        + DPN++       I+    SDA 
Sbjct: 33  PSC-VQSTVTRVCSLVYDSYHHHYNHARFSPPTLHLDVDPNSLTHDQAVTIVASLASDAG 91

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
            ++ L +F W+    +  H   L      SL+  K + K    +   VK+  F  +  + 
Sbjct: 92  SMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKS--FAEIGRVK 149

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
            A+           ++I+M                      + GL  S  + N +++ + 
Sbjct: 150 EAI----------EMVIEM---------------------HNQGLAPSTKTLNWVVKIVT 178

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G  E  E ++ EM  R ++ N  S+  ++ G CK G + ++   +  M   G      
Sbjct: 179 EMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNA 238

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T ++++  +C+KG +    +A   F+   E G+ PN + F  +I+G CK  ++  A ++ 
Sbjct: 239 TLSLIVREFCEKGFVT---RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEML 295

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCK 341
           EEM   G    V T+ +LI+GLC  G  ++A  L  +++ S   KPNV+T  A+I+G+C+
Sbjct: 296 EEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR 355

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + + +A +L   + EQGL+P+  TY TLID +CK G  E A+ + N M + G  P+V T
Sbjct: 356 DEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCT 415

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN ++ GL ++G V+    ++     NG+ A  VTY IL+   CK  + K+A+ L +   
Sbjct: 416 YNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFN--- 472

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           KM K    P+I +Y  LI  FC++ +++++     E +  GL+P   TY
Sbjct: 473 KMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTY 521



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 199/401 (49%), Gaps = 33/401 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+R  + GL+ ++++   ++  L K G  +    + +EM  R  + N+ +   +++GLCK
Sbjct: 260 FRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCK 319

Query: 199 AGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G   KA  + ++ ++S    P V+TY  +I GYC+     KM +A+ +   M E G+ P
Sbjct: 320 KGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDE---KMNRAEMLLSRMKEQGLAP 376

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+ TLIDG CK  N   A ++   M   G +  V TYN++++GLC  G++ EA  + 
Sbjct: 377 NTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVL 436

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
                +GL  + VT   LI+  CK+  +++A VLF+ + + G+ P + +Y TLI  +C+E
Sbjct: 437 KSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE 496

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            RM+++       +  G++P   TY  +I G  REGN+       + + ++G  +  +TY
Sbjct: 497 KRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITY 556

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK-----------------------------MEKEKK 468
             L+  LCK  K  +A  L D M +                             +E+ +K
Sbjct: 557 GALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEK 616

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              + T N L++  C + K+  A    ++LL+K    N+ T
Sbjct: 617 KLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVT 657



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 4/290 (1%)

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           IG++ +A  +  +M   G+ P+  T N ++    +   +  A  +F+EM + G+    V+
Sbjct: 145 IGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVS 204

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  ++ G C  G + E+      M+  G   +  T + ++  FC+K  V +A   F    
Sbjct: 205 YRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFC 264

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E GL P++I +  +I+  CK G ++ AF M   M+ RG  P+V T+  LI GL ++G  E
Sbjct: 265 EMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTE 324

Query: 417 GVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
               +  +LV +   +  ++TY  ++   C+D K  +A  LL    +M+++   PN  TY
Sbjct: 325 KAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLS---RMKEQGLAPNTNTY 381

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             LI G C+ G  E A  L+N + E+G  PN  TY  + + + +KG + +
Sbjct: 382 TTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQE 431



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 32/200 (16%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           IS +    +      ++ ++ + GR+++A  M   M ++G+ P   T N ++  ++  G 
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------ 462
           VE   N+ +E+   G++   V+Y ++V   CK G   ++   L  M +            
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 463 -----MEK----EKKW-----------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                 EK       W           PN++ +  +I+G C++G ++ A  +L E++ +G
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 503 LIPNQTTYQIVREEMMEKGF 522
             PN  T+  + + + +KG+
Sbjct: 303 WKPNVYTHTALIDGLCKKGW 322


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 241/490 (49%), Gaps = 50/490 (10%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           +R + S++  G++L SLV  K +P               T++S         S  +    
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFP---------------TAISL--------SKQMEVKG 162

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFK-----RAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           I  D++ L+ + N   HLG  AF      +    G + + +    L++ L  +G+ +   
Sbjct: 163 IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL 222

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           + + ++  +  ++N  S+  +LNGLCK G+   A  ++  ++     P VV YN +IDG 
Sbjct: 223 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   + + Y     + +M   GI P+ +T++TLI GFC    +  A  +  EM    I 
Sbjct: 283 CKDKLVNEAYD---FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V TY  LI+ LC +GKL EA  L   M   G+KPNVVT + L++G+C    V  A+ +
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + +  ++PSV +YN +I+  CK   +++A  +   ML + V+P+  TYN LI GL +
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G +    ++M EL + G  A ++TY  L+  LCK+    KA++L     KM++    PN
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF---MKMKERGIQPN 516

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
             TY  LI G C+  +L++A  L   +L KG   +  TY +                ++ 
Sbjct: 517 KYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKS 576

Query: 516 EMMEKGFIPD 525
           +M + G IPD
Sbjct: 577 KMEDNGCIPD 586



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   +  V+  N ++  L K+    +    Y EM  R I  ++ +++ ++ G C AG+L 
Sbjct: 265 DRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLM 324

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  ++ +M    ++P V TY ILID  CK+   GK+ +A  +   M + G+ PN VT++
Sbjct: 325 GAFSLLNEMTLKNINPDVYTYTILIDALCKE---GKLKEAKNLLGVMTKEGVKPNVVTYS 381

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+DG+C    +  A ++F  M    +   V +YN +INGLC    +DEA+ L  EM+  
Sbjct: 382 TLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK 441

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + PN VT N+LI+G CK   +  A  L  ++  +G    VITY +L+D  CK   ++ A
Sbjct: 442 NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKA 501

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            A+   M +RG+ P+  TY  LI GL +   ++  + +   ++  G    + TYN+++G 
Sbjct: 502 IALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGG 561

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK+G   +A+++     KME     P+ VT+ ++I+   +K + + A  LL+E++ KGL
Sbjct: 562 LCKEGMLDEALAMKS---KMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618

Query: 504 I 504
           +
Sbjct: 619 L 619



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 183/326 (56%), Gaps = 3/326 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            ++ +      G+   V++ + L+      G+      +  EM  + I  ++ ++  +++
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK GKL +A +++  M   GV P VVTY+ L+DGYC    +G+++ A  +F  MV+  
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL---VGEVHNAKQIFHAMVQTE 407

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+  ++N +I+G CK +++  AM +  EM    +    VTYNSLI+GLC  G++  A+
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  E+   G   +V+T  +L++G CK + ++KA  LF  + E+G+ P+  TY  LID  
Sbjct: 468 DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  R+++A  +   +L +G   DV TYN +I GL +EG ++    + +++ +NG     
Sbjct: 528 CKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDA 587

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEM 460
           VT+ I++ +L +  ++ KA  LL EM
Sbjct: 588 VTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 138/268 (51%), Gaps = 8/268 (2%)

Query: 253 NGIL-----PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           NG+L     P+ + F  ++    K ++   A+ + ++M   GI   +VT + LIN  C  
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++  + ++  +++  G +PN +    L+ G C K  V+K+    D +  QG   + ++Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TL++  CK G    A  +   + DR   PDV  YN +I GL ++  V    +   E+ +
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+   ++TY+ L+   C  G+   A SLL+E   M  +   P++ TY +LI   C++GK
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNE---MTLKNINPDVYTYTILIDALCKEGK 357

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVRE 515
           L++A  LL  + ++G+ PN  TY  + +
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMD 385



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 58/242 (23%)

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKA--RVLFDDISEQGLSPSVITYNTLI--DAYC-- 375
           A G+ PN+VT + LIN  C + L + A    +   I + G  P+ IT  TL+  +  C  
Sbjct: 4   AKGIVPNLVTLSILIN--CLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAI 61

Query: 376 KEGRM-----------------------------------------------EDAFAMRN 388
           K  RM                                                DA +  N
Sbjct: 62  KLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFN 121

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML     P +  +  ++  L +  +     ++  ++   G+   LVT +IL+   C  G
Sbjct: 122 GMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLG 181

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +   + S+L ++ K+  +   PN +    L+KG C KG+++ +    ++++ +G   NQ 
Sbjct: 182 QMAFSFSVLGKILKLGYQ---PNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238

Query: 509 TY 510
           +Y
Sbjct: 239 SY 240


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 242/484 (50%), Gaps = 35/484 (7%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  ++    YP      S +H + K+  ++    +F  +  C    C+   ++  + +
Sbjct: 335 RILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG---CQPGYLVYNIFI 391

Query: 125 AYVKNMKPH-------LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
             V + +         L  +A+    D G+  + ++ +   R L   GKF+    +  EM
Sbjct: 392 GSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEM 451

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
             +    +  +++ V+  LC A K+ KA  + E+MK  G+ P V TY ILID +CK G I
Sbjct: 452 MGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLI 511

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
               +A   F +M+  G  PN VT+  LI  + K + +  A ++FE M   G    VVTY
Sbjct: 512 Q---QARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTY 568

Query: 298 NSLINGLCVDGKLDEAVA----LRDEMMASGLK------------PNVVTSNALINGFCK 341
            +LI+G C  G++++A      +R ++ +S +             PNV+T  AL++G CK
Sbjct: 569 TALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCK 628

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V++A  L D +   G  P+ I Y+ +ID +CK G+++DA  +   M +RG  P++ T
Sbjct: 629 ANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYT 688

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+  I  L ++  ++ V  ++++++ N     +V Y  +V  LCK GK+ +A  L   M 
Sbjct: 689 YSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKL---ML 745

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           KME++   PN+VTY  +I GF + GK+E    L  ++  KG  PN  TY+++       G
Sbjct: 746 KMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNG 805

Query: 522 FIPD 525
            + +
Sbjct: 806 LLDE 809



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 268/618 (43%), Gaps = 129/618 (20%)

Query: 16  IRNHHW-SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL- 73
           I  H +  + +N   +++++++ N+  +P L +++F W+ +++  SH+  +  +LL  L 
Sbjct: 91  IETHQFFRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLG 150

Query: 74  --VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
             V A     ++ FL M +K+     +  + + L       CRN                
Sbjct: 151 CNVNADDRVPLK-FL-MEIKDDDHELLRRLLNFLVR---KCCRNGWW------------- 192

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK------------- 178
            ++  E   R  D+G K S  + N L++  ++  K +    V +EM              
Sbjct: 193 -NMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSC 251

Query: 179 -----------RRRIELNLDSFNFV---------LNGLCKAGKLNKASDIMEDMKSLGVS 218
                      R   +L  ++ +FV         ++GLC+A    +A DI+  M+S    
Sbjct: 252 FAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCI 311

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P VVTY IL+ G  +KG +G+  +   +   M+  G  PN   FN+LI  +CK  + S A
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKR---ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYA 368

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVD------------------------------- 307
            K+F++M   G   G + YN  I  +C +                               
Sbjct: 369 YKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNV 428

Query: 308 ----------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
                     GK D+A  +  EMM  G  P+  T + +I   C    VEKA  LF+++  
Sbjct: 429 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR 488

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G+ PSV TY  LID++CK G ++ A    + ML +G  P+V TY  LI    +   +  
Sbjct: 489 NGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPV 548

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL------------LDEMFKMEK 465
              +   ++  G +  +VTY  L+   CK G+ +KA  +            +D+ FK++ 
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDH 608

Query: 466 EK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------------- 510
              + PN++TY  L+ G C+  ++++A+ LL+ +L  G  PNQ  Y              
Sbjct: 609 NNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQ 668

Query: 511 --QIVREEMMEKGFIPDI 526
             Q V  +M E+G+ P++
Sbjct: 669 DAQEVFTKMSERGYSPNL 686



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 199/401 (49%), Gaps = 20/401 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G+  SV +   L+ +  K G  +     + EM  +    N+ ++  +++
Sbjct: 479 AFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIH 538

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              KA ++  A ++ E M   G  P VVTY  LIDG+CK G I K  +  A  +  +E+ 
Sbjct: 539 AYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESS 598

Query: 255 IL-------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            +             PN +T+  L+DG CK   +  A ++ + M +HG     + Y+++I
Sbjct: 599 DMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVI 658

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GKL +A  +  +M   G  PN+ T ++ I+   K   ++    +   + E   +
Sbjct: 659 DGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCT 718

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+ Y  ++D  CK G+ ++A+ +   M ++G  P+V TY  +I G  + G +E    +
Sbjct: 719 PNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLEL 778

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIK 480
             ++ + G     +TY +L+   C +G   +A  LLDEM    K+  WP +I+++  +I+
Sbjct: 779 FRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM----KQTYWPKHILSHRKIIE 834

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           GF Q  +   + GLL+EL E   +P  + Y+I+ +  ++ G
Sbjct: 835 GFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAG 873



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 143/300 (47%), Gaps = 13/300 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D ++  + K  K     E F +  + G   ++ + +  +  L K+ + + V  V 
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL 709

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M  M+  G +P VVTY  +IDG+   
Sbjct: 710 SKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF--- 766

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+ +   +F+DM   G  PN +T+  LI+  C +  +  A K+ +EM        +
Sbjct: 767 GKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI 826

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +++  +I G     +   ++ L DE+  +   P       LI+ + K   +E A  L ++
Sbjct: 827 LSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEE 884

Query: 355 ISEQGLSPSVIT-----YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           IS    SPS        Y +LI+      +++ A  +  SM+ + V+P++S    LI GL
Sbjct: 885 ISS---SPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGL 941



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 12/227 (5%)

Query: 137 EAFK---RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA+K   +  + G   +V++   ++    K GK E    ++++M  +    N  ++  ++
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N  C  G L++A  ++++MK       ++++  +I+G+ +     +   +  +  ++ EN
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ-----EFITSIGLLDELSEN 853

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMG---SHGIAAGVVTYNSLINGLCVDGKL 310
             +P +  +  LID + K   +  A+ + EE+    SH ++   + Y SLI  L    K+
Sbjct: 854 ESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYL-YASLIENLSHASKV 912

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           D+A+ L   M++  + P +     LI G  K    ++A  L D I +
Sbjct: 913 DKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQ 959


>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 538

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 219/445 (49%), Gaps = 9/445 (2%)

Query: 21  WSKLK----NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVA 76
           W KL     + D   V   L     D +L   +F W+     ASHSL     +LH+L   
Sbjct: 69  WDKLNKLSDHLDSFRVKNVLLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKN 128

Query: 77  KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           +K+    S L   + NG     + +F AL            + D L   +    K     
Sbjct: 129 RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNAT 188

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F +  DYG   +V SCN  + +L+ +G+ +     Y+EM+R +I  N  + N V++G 
Sbjct: 189 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGY 248

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGI 255
           C++GKL+K  ++++DM+ LG     V+YN LI G+C+KG +    K     K+M+ +NG+
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALK----LKNMMGKNGL 304

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VTFNTLI GFC+   +  A KVF EM +  +    VTYN+LING    G  + A  
Sbjct: 305 QPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFR 364

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             ++M+ +G++ +++T N LI G CK+    KA     ++ ++ L P+  T++ LI   C
Sbjct: 365 FYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
                +  F +  SM+  G  P+  T+N LI+   +  + +G   ++ E+V   +     
Sbjct: 425 VRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSR 484

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
           T + +   L   GK +    LL EM
Sbjct: 485 TVHQVCNGLNHQGKDQLVKELLQEM 509



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 32/424 (7%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQL-LRALVKEGKFEDVEYVYKEM--------------- 177
           L FE F  A      S  L  + + L  L K  KF+  E + +++               
Sbjct: 97  LSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156

Query: 178 ---KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
                R  +     F+ +        K   A+D    MK  G  P V + N  +      
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL-- 214

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
            G G++  A   +++M    I PN  T N ++ G+C+   +   +++ ++M   G  A  
Sbjct: 215 -GQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATH 273

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V+YN+LI G C  G L  A+ L++ M  +GL+PNVVT N LI+GFC+   +++A  +F +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGE 333

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +    L P+ +TYNTLI+ Y ++G  E AF     M+  G+  D+ TYN LI GL ++  
Sbjct: 334 MKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAK 393

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                  + EL    +     T++ L+   C    + +   L   M +       PN  T
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIR---SGCHPNEQT 450

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGL-IPNQTTYQIVR------EEMMEKGFIPDIE 527
           +N+LI  FC+    + A  +L E++ + + + ++T +Q+        ++ + K  + ++E
Sbjct: 451 FNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEME 510

Query: 528 GHMY 531
           G  +
Sbjct: 511 GKKF 514



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 47/104 (45%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           ++L  NS     L++          GFE +K     G   +  + N L+ A  K   F+ 
Sbjct: 407 ENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDG 466

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
              V +EM RR I L+  + + V NGL   GK     +++++M+
Sbjct: 467 AAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEME 510


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 241/505 (47%), Gaps = 41/505 (8%)

Query: 44  VLILRYFCWSTKE--LRASHSLLLTGRLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVST 100
           VL L++  W  K+  L  +H   + G   H LV A+ Y   +S L H+  KN   +  + 
Sbjct: 33  VLALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKN---SGSNF 89

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +F  L         N  + D+L+  Y++          F      G K SV +CN ++ +
Sbjct: 90  LFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMAS 149

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           +VK  +   V   +K+M   R+  N+ SFN +++ LC  GKL KA +I+  M+  G  P 
Sbjct: 150 MVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPT 209

Query: 221 VVTYNILIDGYCKKGGIG-----------KMYKADA---------------------VFK 248
           +V+YN L+   CKKG              K  +AD                      V K
Sbjct: 210 IVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLK 269

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M    I PNEV++NTLI+GF K+  I  A +VF EM    ++  ++TYN LING C++G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +EA+ + D M A+ ++PN VT   L+NG  K    + AR + +       S + I++ 
Sbjct: 330 NFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHT 389

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +ID  C+ G +++AF +   M   GV PD+ T++ LI G  + GN+   + +M+++   
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYRE 449

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G     V ++ L+   CK G   +A+        M    +  +  T N L+   C+ GKL
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAA---MNLNGQNADNFTCNSLVASLCENGKL 506

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV 513
            +A   L+ +   GL+PN  T+  +
Sbjct: 507 VEAEEFLHHISRIGLVPNSVTFDCI 531



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 223/488 (45%), Gaps = 59/488 (12%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+  L V  K  K  + L M  +NG   ++ +    LS C    C+       L+L +  
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC----CKKGRFKFALVLIHHM 236

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K              G+++ V + N  + +L +  +      V K+M+ + I  N  S
Sbjct: 237 ECK--------------GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++NG  K GK+  A+ +  +M  L +SP ++TYNILI+GYC  G   +   A  V  
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE---ALRVLD 339

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M  N + PNEVT  TL++G  K      A  + E    +  +   +++  +I+GLC +G
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNG 399

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LDEA  L  EM   G+ P+++T + LINGFCK   + KA+ +   I  +G  P+ + ++
Sbjct: 400 LLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFS 459

Query: 369 TLIDAYCKEGRMEDAFAMRNSM----------------------------------LDR- 393
           TLI   CK G + +A     +M                                  + R 
Sbjct: 460 TLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G++P+  T++C+I G +  G+  G  ++ + +++ G      TY  L+  LCK     +A
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             LL    K+       + ++YN LI    + G L +A  L  E+++  ++P+  TY  +
Sbjct: 580 RKLLK---KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636

Query: 514 REEMMEKG 521
              ++ +G
Sbjct: 637 LSGLIREG 644



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 226/545 (41%), Gaps = 121/545 (22%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           P I S+   L    K G+F     + H +        +C  ++ ID L     +N +   
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSL----CRNSRSAQ 263

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G+   K+  +  +  + +S N L+   VKEGK      V+ EM    +  NL ++N ++N
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVT------------------------------- 223
           G C  G   +A  +++ M++  V P  VT                               
Sbjct: 324 GYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL 383

Query: 224 ----YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA-- 277
               + ++IDG C+ G + + ++   +  +M ++G+ P+ +TF+ LI+GFCK  NI+   
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQ---LLIEMCKDGVHPDIITFSVLINGFCKVGNINKAK 440

Query: 278 ---------------------------------AMKVFEEMGSHGIAAGVVTYNSLINGL 304
                                            AMK +  M  +G  A   T NSL+  L
Sbjct: 441 EVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASL 500

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF------------------------- 339
           C +GKL EA      +   GL PN VT + +ING+                         
Sbjct: 501 CENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSP 560

Query: 340 ----------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                     CK +   +AR L   +    L+   I+YNTLI    K G + +A  +   
Sbjct: 561 FTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEE 620

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDG 448
           M+   +LPD  TY C+++GL REG +      +  L+    +    + Y   +  L K G
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +SK A+ L  E   ME++    +++  N +  G+ + GK+  A+ L+++   K +IPN T
Sbjct: 681 QSKAALYLFKE---MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLT 737

Query: 509 TYQIV 513
           T+ I+
Sbjct: 738 TFNIL 742



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 183/377 (48%), Gaps = 8/377 (2%)

Query: 147  LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
            L S V +C   +  L K G+ +   Y++KEM+ + + L+L + N + +G  + GK+  AS
Sbjct: 664  LNSIVYTC--FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSAS 721

Query: 207  DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
             ++   ++  V P + T+NIL+ GY +   I   +K   ++  M  +G  PN +T+++LI
Sbjct: 722  SLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFK---LYNLMRRSGFFPNRLTYHSLI 778

Query: 267  DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             G C    +   +K+ +   +       +T+N LI   C    LD+ + L   M    + 
Sbjct: 779  LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 327  PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
             +  T  A+ +   ++ + +   V   ++ ++G  P+   Y T++   C+ G ++ AF +
Sbjct: 839  LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 387  RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            ++ M+  G+  D +    ++ GL+  G +E    I+  ++         T+  L+   CK
Sbjct: 899  KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 447  DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                K+A +L      ME  +   +IV YNVLI   C  G +  A     E+ +KGL+PN
Sbjct: 959  KDNFKEAHNL---KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPN 1015

Query: 507  QTTYQIVREEMMEKGFI 523
             TTY+++   +  K ++
Sbjct: 1016 MTTYRVLVSAISTKHYV 1032



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 247/539 (45%), Gaps = 99/539 (18%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID--MLML 124
           G LL+ L  + K+   R+ L  +  N   TS++ I H +    D LCRN ++ +   L++
Sbjct: 354 GTLLNGLYKSAKFDVARNILERYCINR--TSLNCISHTVMI--DGLCRNGLLDEAFQLLI 409

Query: 125 AYVKN-MKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEG------KFEDVEY 172
              K+ + P +         F + G+      V+S       + +EG       F  + Y
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMS------KIYREGFVPNNVIFSTLIY 463

Query: 173 -------VYKEMK-RRRIELN---LDSF--NFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
                  VY+ MK    + LN    D+F  N ++  LC+ GKL +A + +  +  +G+ P
Sbjct: 464 NSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVP 523

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             VT++ +I+GY     +G    A +VF  M+  G  P+  T+ +L+   CK +N   A 
Sbjct: 524 NSVTFDCIINGY---ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           K+ +++    +A   ++YN+LI  +   G L EAV L +EM+ + + P+  T   +++G 
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 340 CKK-----------KLVEK-------------------------ARVLFDDISEQGLSPS 363
            ++           +L++K                         A  LF ++ E+GLS  
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +I  N++ D Y + G++  A ++ +   ++ V+P+++T+N L+ G SR  ++     + N
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +  +G     +TY+ L+  LC  G  +  + +L +MF  E      + +T+N+LI+  C
Sbjct: 761 LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML-KMFIAESST--IDDLTFNMLIRKCC 817

Query: 484 QKGKLE------------------DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           +   L+                  D    + ++L + ++     Y +   EM++KGFIP
Sbjct: 818 EINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQN--YFVFMHEMLKKGFIP 874



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 160/363 (44%), Gaps = 18/363 (4%)

Query: 95   FTSVSTIFHALSTCSDSLCRNSI----IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
            ++ +  +F A S  S +  +N I      ++L+  Y +       F+ +      G   +
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 151  VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             L+ + L+  L   G  E    + K        ++  +FN ++   C+   L+K  D+  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 211  DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +M+   VS    T   + D   ++      +       +M++ G +P    + T++   C
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYF---VFMHEMLKKGFIPTSKQYCTMMKRMC 887

Query: 271  KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
            +  +I  A K+ ++M + GI+       +++ GL + GK++EA+ +   M+     P   
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 331  TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            T   L++ FCKK   ++A  L   +    +   ++ YN LI A C  G +  A      +
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 391  LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              +G+LP+++TY  L++ +S +  V     ++ +L + G+ +G +           DGKS
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL-----------DGKS 1056

Query: 451  KKA 453
            +K+
Sbjct: 1057 QKS 1059



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 3/196 (1%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N    + LI  + ++ +V  A   F  +  +G  PSV T N ++ +  K  R    ++  
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFF 163

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ML   V P+VS++N LI+ L  +G ++   NI+  +  NG    +V+YN L+   CK 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+ K A+ L+  M   E +    ++ TYN+ I   C+  +      +L ++  K + PN+
Sbjct: 224 GRFKFALVLIHHM---ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 508 TTYQIVREEMMEKGFI 523
            +Y  +    +++G I
Sbjct: 281 VSYNTLINGFVKEGKI 296


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 211/404 (52%), Gaps = 35/404 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N ++    KEG       ++KEM +R I  +L ++N V++ LCKA  ++KA   +
Sbjct: 231 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 290

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M +  V P   TYN LI GY      G+  +A  VFK+M  + ILP+ VT + L+   
Sbjct: 291 RQMVNKRVLPNNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 347

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   I  A  VF+ M   G    V +YN ++NG    G L +   L D M+  G+ P+ 
Sbjct: 348 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 407

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N 
Sbjct: 408 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 467

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+D+GV PD   YNCLI G    G++   + +++E++NNGM   +V ++ ++  LCK G+
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527

Query: 450 SKKAVSLLDEMF----------------------KMEKEKKW----------PNIVTYNV 477
              A ++ D                         KMEK  +           PN+V Y  
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           L+ G+C+ G++++   L  E+L++G+ P+   Y I+ + + + G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 233/478 (48%), Gaps = 27/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFV-------------------KNGKFTSVSTIFHALSTCS 109
           ++H+L  A+   K  +FL   V                     G++     +F  +    
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR--R 330

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            S+  + + + MLM +  K  K     + F      G    V S N +L     +G   D
Sbjct: 331 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 390

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           +  ++  M    I  +  +FN ++      G L+KA  I  +M+  GV P VVTY  +I 
Sbjct: 391 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 450

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C+   IGKM  A   F  M++ G+ P++  +N LI GFC   ++  A ++  E+ ++G
Sbjct: 451 ALCR---IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +V ++S+IN LC  G++ +A  + D  +  GL P+ V  + L++G+C    +EKA 
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 567

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML RG+ P    Y+ +I GL
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G     +   +E+  +G+   + TYNI++  L K+    +A+ L  E+  M  +   
Sbjct: 628 FQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI-- 685

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            NI+T N +I G  Q  ++E+A  L   +    L+PN  TY I+   ++++G + + E
Sbjct: 686 -NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAE 742



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 49/415 (11%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +N+
Sbjct: 100 PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 159

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 160 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 216

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  PN V +NT+IDGF K+ +++ A  +F+EM   GI   +VTYNS+++ 
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 304 LC-----------------------------------VDGKLDEAVALRDEMMASGLKPN 328
           LC                                     G+  EAV +  EM    + P+
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VVT + L+   CK   +++AR +FD ++ +G +P V +YN +++ Y  +G + D   + +
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML  G+ PD  T+N LI   +  G ++    I NE+ ++G++  +VTY  ++ ALC+ G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K   A+   ++M     +   P+   YN LI+GFC  G L  A  L++E++  G+
Sbjct: 457 KMDDAMEKFNQMI---DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  ++N ++ G C 
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 489

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V ++ +I+  CK   +G++  A  +F   V  G+ P+
Sbjct: 490 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 546

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V ++ L+DG+C    +  A++VF+ M S GI   VV Y +L+NG C  G++DE ++L  
Sbjct: 547 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 606

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  + +I+G  +      A++ F +++E G++  + TYN ++    K  
Sbjct: 607 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 666

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  ++ T N +I G+ +   VE  +++   +  + +   +VTY+
Sbjct: 667 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYS 726

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     PN    N +++   +K ++  A   L++
Sbjct: 727 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 782

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 783 IDERNFSLEHLTAMLLVDLFSSKG 806



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 174/368 (47%), Gaps = 40/368 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +  D G+     + N L++     G     + +  E+    + L++  F+ ++N
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G++  A +I +   ++G+ P  V Y++L+DGYC    +GKM KA  VF  MV  G
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL---VGKMEKALRVFDAMVSAG 577

Query: 255 ILPNEVTFNTLIDGFCK----DENIS--------------------------------AA 278
           I PN V + TL++G+CK    DE +S                                A 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           MK F EM   GIA  + TYN ++ GL  +   DEA+ L  E+ A  +K N++T N +I+G
Sbjct: 638 MK-FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
             + + VE+A+ LF  IS   L P+V+TY+ +I    KEG +E+A  M +SM + G  P+
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
               N ++  L ++  +      ++++         +T  +LV      G  ++ +  L 
Sbjct: 757 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLP 816

Query: 459 EMFKMEKE 466
             +    E
Sbjct: 817 AKYHFLAE 824


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 205/384 (53%), Gaps = 9/384 (2%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           V+N +   G +  +R    G    V++C  L+R   + GK      + + ++      ++
Sbjct: 118 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDV 177

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++N ++ G CK+G+++KA  ++E M    V+P VVTYN ++   C  G   K+ +A  V
Sbjct: 178 ITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG---KLKEAMEV 231

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
               ++    P+ +T+  LI+  C D  +  AMK+ +EM   G    VVTYN LING+C 
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +G+LDEA+   + M   G +PNV+T N ++   C       A  L  D+  +G SPSV+T
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N LI+  C++  +  A  +   M   G +P+  +YN L+ G  +E  ++     +  +V
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G    +VTYN L+ ALCKDGK+  AV +L+++     +   P ++TYN +I G  + G
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQL---SSKGCSPVLITYNTVIDGLTKVG 468

Query: 487 KLEDANGLLNELLEKGLIPNQTTY 510
           K E A  LL E+  KGL P+  TY
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITY 492



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 205/368 (55%), Gaps = 9/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+    K G   +++   + ++R  +  ++ ++N +L  LC +GKL +A
Sbjct: 172 GAVPDVITYNVLIGGYCKSG---EIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEA 228

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++        P V+TY ILI+  C   G+G+  K   +  +M + G  P+ VT+N L
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK---LLDEMRKKGCKPDVVTYNVL 285

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK+  +  A+K    M  +G    V+T+N ++  +C  G+  +A  L  +M+  G 
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LIN  C+K+L+ +A  + + + + G  P+ ++YN L+  +C+E +M+ A  
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+ RG  PD+ TYN L+  L ++G  +    I+N+L + G    L+TYN ++  L 
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK++ A  LL+E   M ++   P+I+TY+ L++G   +GK+++A  + +++    + P
Sbjct: 466 KVGKTEYAAELLEE---MRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKP 522

Query: 506 NQTTYQIV 513
           +  TY  +
Sbjct: 523 SAVTYNAI 530



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 208/410 (50%), Gaps = 26/410 (6%)

Query: 134 LGFEAFKRAGDYGLKS-SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           +G E+    G  G +S    + N  LR LV+ G+ E+     + M  +    ++ +   +
Sbjct: 89  IGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 148

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           + G C++GK  KA+ IME +++ G  P V+TYN+LI GYCK G I K   A  V + M  
Sbjct: 149 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK---ALQVLERM-- 203

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             + P+ VT+NT++   C    +  AM+V +          V+TY  LI   C D  + +
Sbjct: 204 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ 262

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ L DEM   G KP+VVT N LING CK+  +++A    +++   G  P+VIT+N ++ 
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           + C  GR  DA  +   ML +G  P V T+N LI  L R+  +    +++ ++  +G   
Sbjct: 323 SMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             ++YN L+   C++ K  +A+  L+ M        +P+IVTYN L+   C+ GK + A 
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVS---RGCYPDIVTYNTLLTALCKDGKADAAV 439

Query: 493 GLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            +LN+L  KG  P   TY  V                 EEM  KG  PDI
Sbjct: 440 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDI 489



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 21/440 (4%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIF 102
           ++R FC S K  +A+       R++  L  +   P + ++   +  + K+G+      + 
Sbjct: 148 LIRGFCRSGKTRKAT-------RIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             +S   D +  N+I+  +     +K        E   R         V++   L+ A  
Sbjct: 201 ERMSVAPDVVTYNTILRSLCDSGKLKE-----AMEVLDRQMQRECYPDVITYTILIEATC 255

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
            +        +  EM+++  + ++ ++N ++NG+CK G+L++A   + +M   G  P V+
Sbjct: 256 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI 315

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T+NI++   C     G+   A+ +  DM+  G  P+ VTFN LI+  C+   +  A+ V 
Sbjct: 316 THNIILRSMC---STGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 372

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M  HG     ++YN L++G C + K+D A+   + M++ G  P++VT N L+   CK 
Sbjct: 373 EKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 432

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              + A  + + +S +G SP +ITYNT+ID   K G+ E A  +   M  +G+ PD+ TY
Sbjct: 433 GKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL  EG V+    I +++    ++   VTYN ++  LCK  ++ +A+  L  M  
Sbjct: 493 STLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM-- 550

Query: 463 MEKEKKWPNIVTYNVLIKGF 482
           +EK  K P   TY +LI+G 
Sbjct: 551 VEKGCK-PTKATYTILIEGI 569



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 124/248 (50%), Gaps = 16/248 (6%)

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           + FEE  S          N  +  L  +G+L+E +   + M+  G  P+V+   +LI GF
Sbjct: 103 RSFEEFAS----------NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGF 152

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C+     KA  + + +   G  P VITYN LI  YCK G ++ A  +   M    V PDV
Sbjct: 153 CRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDV 209

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TYN ++  L   G ++    +++  +       ++TY IL+ A C D    +A+ LLDE
Sbjct: 210 VTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDE 269

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
              M K+   P++VTYNVLI G C++G+L++A   LN +   G  PN  T+ I+   M  
Sbjct: 270 ---MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326

Query: 520 KGFIPDIE 527
            G   D E
Sbjct: 327 TGRWMDAE 334


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ +S + + V      S S +F  +     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+   +        +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           R   +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 RYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  +  A K+F+EM   G+    VT+ +L
Sbjct: 191 FRLKSA---MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +GKLD A+ +  +M++ G  P+ +T N LI G CKK  + +A+ L D++S +GL
Sbjct: 248 IDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D  +Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY I++   CK+G  K    LL E   M+++   P ++T
Sbjct: 368 MLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKE---MQRDGHVPCVIT 418



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 161/277 (58%), Gaps = 3/277 (1%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           + +K+++E     +   FN L+D FCK+  I  A  VF+ +   G+   VV++N+L+NG 
Sbjct: 122 SFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGY 181

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G LDE   L+  M ASG++P+V T + LING CK+  +++A  LFD++ ++GL P+ 
Sbjct: 182 IKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNG 241

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+ TLID +CK G+++ A  +   ML +G  PD  TYN LI GL ++G++   +++ +E
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE 301

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G++   +TY  L+   CK+G  + A      M K   E    + V+Y  LI G C+
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK---ENIRLDDVSYTALISGLCK 358

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +G+  DA  +L E+L  GL P+  TY IV  E  + G
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNG 395



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 27/144 (18%)

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N L+    +EG +   +++ + +   G+R  +V++N L+    K G        LDE F
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGD-------LDEGF 191

Query: 462 K----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----- 512
           +    M      P++ TY+VLI G C++ K+++A+ L +E+L++GL+PN  T+       
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGH 251

Query: 513 -----------VREEMMEKGFIPD 525
                      + ++M+ +GF PD
Sbjct: 252 CKNGKLDLAMEIYKQMLSQGFSPD 275


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 205/370 (55%), Gaps = 6/370 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +R     ++  V+  + ++ ++ K+    D   +Y EM  RRI  N+ +++ +++
Sbjct: 194 ALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  GKL  A  +   M S  ++P V T+NIL+D +CK+G + +     A+   M++ G
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAM---MMKQG 310

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I P+ VT+N+L+DG+C    ++ A  +   M   G+ A V +YN +ING C    +D+A+
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + PNV+T N+LI+G CK   +  A  L D + ++G  P +ITY++++DA 
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++ A A+   + D+G+ P++ TY  LI GL + G +E  RNI  +L+  G    +
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY +++   C  G   +A+SLL    KM+     P+ +TY ++I     K + + A  L
Sbjct: 491 NTYTVMIQGFCSHGLFDEALSLLS---KMKDNSCIPDAITYEIIICSLFDKDENDKAEKL 547

Query: 495 LNELLEKGLI 504
           L E++ +GL+
Sbjct: 548 LREMITRGLL 557



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 210/377 (55%), Gaps = 10/377 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+      + + +  + ++L++  ++ +++ +CK   +N A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M S  +S  +VTY+ LI G+C    +GK+  A  +F  M    I P+  TFN L
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCI---VGKLKDAIGLFNKMTSENINPDVYTFNIL 286

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D FCK+  +  A      M   GI   +VTYNSL++G C+  +++ A ++ + M   G+
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
              V + N +INGFCK K+V++A  LF ++  + + P+VITYN+LID  CK GR+  A  
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALE 406

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRG  PD+ TY+ ++  L +   V+    ++ +L + G+R  + TY IL+  LC
Sbjct: 407 LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLC 466

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIV--TYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K G+ + A ++ +++       K  N+   TY V+I+GFC  G  ++A  LL+++ +   
Sbjct: 467 KGGRLEDARNIFEDLL-----VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521

Query: 504 IPNQTTYQIVREEMMEK 520
           IP+  TY+I+   + +K
Sbjct: 522 IPDAITYEIIICSLFDK 538



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 198/369 (53%), Gaps = 19/369 (5%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           +GK   +  + +  ST  DS+C++  + D               F+ +       + S++
Sbjct: 202 DGKLVQLDVVMY--STIIDSMCKDKNVND--------------AFDLYSEMVSRRISSNI 245

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ + L+      GK +D   ++ +M    I  ++ +FN +++  CK G++ +A + +  
Sbjct: 246 VTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAM 305

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G+ P +VTYN L+DGYC    + ++  A ++   M   G+     ++N +I+GFCK
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCL---VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCK 362

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            + +  AMK+F+EM    I   V+TYNSLI+GLC  G++  A+ L D M   G +P+++T
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            +++++  CK  LV+KA  L   + +QG+ P++ TY  LID  CK GR+EDA  +   +L
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G    V+TY  +I G    G  +   ++++++ +N      +TY I++ +L    ++ 
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542

Query: 452 KAVSLLDEM 460
           KA  LL EM
Sbjct: 543 KAEKLLREM 551



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 192/370 (51%), Gaps = 41/370 (11%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F  +L  L K+   +    + + M+  G+ P  V +NILI+ +C+ G I   +   +V  
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAF---SVLA 129

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC--- 305
            +++ G  P+ +T NT I GFC    I  A+   +++ + G     V+Y +LINGLC   
Sbjct: 130 KILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189

Query: 306 -----------VDGKL---------------------DEAVALRDEMMASGLKPNVVTSN 333
                      VDGKL                     ++A  L  EM++  +  N+VT +
Sbjct: 190 ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           ALI+GFC    ++ A  LF+ ++ + ++P V T+N L+DA+CKEGR+++A      M+ +
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ PD+ TYN L+ G      V   ++I+N + + G+ A + +YNI++   CK     +A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + L  E   M  ++ +PN++TYN LI G C+ G++  A  L++ + ++G  P+  TY  +
Sbjct: 370 MKLFKE---MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426

Query: 514 REEMMEKGFI 523
            + + +   +
Sbjct: 427 LDALCKNHLV 436



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 139/268 (51%), Gaps = 3/268 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++F  ++     P ++ F  ++    K ++    + +F++M   GI    V +N LIN
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C  G +  A ++  +++  G +P+ +T N  I GFC K  + +A    D +   G   
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
             ++Y TLI+  CK G    A  +   +  + V  DV  Y+ +I  + ++ NV    ++ 
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+V+  + + +VTY+ L+   C  GK K A+ L +   KM  E   P++ T+N+L+  F
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN---KMTSENINPDVYTFNILVDAF 290

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY 510
           C++G++++A   L  ++++G+ P+  TY
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTY 318



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 161/341 (47%), Gaps = 16/341 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ ++V S N ++    K    +    ++KEM  ++I  N+ ++N +++GLCK+G+++ A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++ M   G  P ++TY+ ++D  CK   + K   A A+   + + GI PN  T+  L
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDK---AIALLIKLKDQGIRPNMYTYTIL 461

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK   +  A  +FE++   G    V TY  +I G C  G  DEA++L  +M  +  
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA-------YCKEG 378
            P+ +T   +I     K   +KA  L  ++  +GL  S + Y +   +       +    
Sbjct: 522 IPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNND 581

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN---NGMRAGLV 435
            ++   +  +    + +L  +     L     R+ +VE    I+    +    G    + 
Sbjct: 582 SLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVN 641

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
           TY +++   C  G   ++++LL    KME     P+ VTY+
Sbjct: 642 TYTVMIQGFCSHGLFDESLALLS---KMEVNGCIPDAVTYD 679



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 19/274 (6%)

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           F  + ++  A+ +F  +         + +  ++  L         ++L  +M   G+KPN
Sbjct: 45  FHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPN 104

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            V  N LIN FC+  L+  A  +   I + G  P  IT NT I  +C +G++  A    +
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ++  G   D  +Y  LI GL + G       ++  +    ++  +V Y+ ++ ++CKD 
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
               A  L  EM      +   NIVTY+ LI GFC  GKL+DA GL N++  + + P+  
Sbjct: 225 NVNDAFDLYSEMVS---RRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 509 TYQI----------VREE------MMEKGFIPDI 526
           T+ I          V+E       MM++G  PDI
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 205/366 (56%), Gaps = 9/366 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V+S N ++      G+ ++   +   M    +E +  ++N ++ GLC  G+ + A  
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALA 173

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++DM   G  P VVTY IL++  CK+ G  +  K   +  +M + G  P+ VT+N +++
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK---LLDEMRDKGCAPDIVTYNVVVN 230

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C++  +  AM+  + + S+G     V+YN ++ GLC   + ++A  L  EM   G  P
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT N LI+  C++ LVE A  + D I + G +P+ ++YN ++ A+CK+ +M+ A A  
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G  PD+ +YN L+  L R G V+    ++++L + G    L++YN ++  L K 
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK+++A+ LL+EM     +   P+I+TY+ +  G C++G++E+A     ++ + G+ PN 
Sbjct: 411 GKTEEALELLNEMV---TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467

Query: 508 TTYQIV 513
             Y  +
Sbjct: 468 VLYNAI 473



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 233/465 (50%), Gaps = 23/465 (4%)

Query: 74  VVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           V+A   P + S+  M   +   G+  +   +  A+    D+   N++I  +       N 
Sbjct: 112 VLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNA 171

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
              L  +  +R    G    V++   LL A  K   ++    +  EM+ +    ++ ++N
Sbjct: 172 LAVLD-DMLRR----GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYN 226

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            V+NG+C+ G+++ A + ++ + S G  P  V+YNI++ G C      +   A+ +  +M
Sbjct: 227 VVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE---RWEDAEKLMAEM 283

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
              G  PN VTFN LI   C+   +  AM++ +++  +G     ++YN +++  C   K+
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM 343

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A+A  + M++SG  P++V+ N L+   C+   V+ A  L   + ++G +P +I+YNT+
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 403

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID   K G+ E+A  + N M+ +G+ PD+ TY+ + +GL REG +E       ++ + G+
Sbjct: 404 IDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGI 463

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           R   V YN ++  LCK   +  A+ L   M         PN  TY +LI+G   +G +++
Sbjct: 464 RPNTVLYNAILLGLCKRRATHSAIDLFTYMV---SNGCMPNESTYTILIEGLAYEGLVKE 520

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           A  ++ EL  +G         +V + ++ KG I  ++G M+   G
Sbjct: 521 AREMMAELCSRG---------VVSKTLVNKGAIRLLDGTMHTSKG 556



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 18/262 (6%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV-TS 332
           N++ A  V      H  AA     N  +  L   G L+EA+ L + M  +GL+P+     
Sbjct: 40  NLAYAGAVAPNAVPHRSAAS----NDRLRVLVRRGDLEEAIRLVESM--AGLEPSAAGPC 93

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
            ALI   C      +AR +          P V++YN ++  YC  G++++A  +  +M  
Sbjct: 94  AALIKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM-- 146

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             + PD  TYN LI GL   G  +    ++++++  G    +VTY IL+ A CK    K+
Sbjct: 147 -PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 205

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           AV LLDE   M  +   P+IVTYNV++ G CQ+G+++DA   L  L   G  PN  +Y I
Sbjct: 206 AVKLLDE---MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNI 262

Query: 513 VREEMMEKGFIPDIEGHMYNIS 534
           V + +       D E  M  +S
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMS 284



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 21/224 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +LH+    KK  +  +F+ + V +G +  + + ++ L T   +LCR   +          
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVS-YNTLLT---ALCRGGEV---------- 378

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                   E   +  D G    ++S N ++  L K GK E+   +  EM  + ++ ++ +
Sbjct: 379 ----DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIIT 434

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ + +GLC+ G++ +A      ++ +G+ P  V YN ++ G CK+      + A  +F 
Sbjct: 435 YSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT---HSAIDLFT 491

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
            MV NG +PNE T+  LI+G   +  +  A ++  E+ S G+ +
Sbjct: 492 YMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVS 535


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 219/432 (50%), Gaps = 56/432 (12%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKE-------------------------- 176
           + G + + +S N L+  L KEG+ E+ + ++Y+E                          
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQG 321

Query: 177 ------MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
                 M  +  EL++ ++N +++GLCK G++++A +I+  M S    P  VTYN LI  
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            CK+  +     A  + + +   G+LP+  TFN+LI G C   N   AM++FEEM   G 
Sbjct: 382 LCKENHVEA---ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC 438

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                TY+ LI  LC + +L EA+ L  EM  SG   NVV  N LI+G CK   V  A  
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED 498

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +FD +   G+S S +TYNTLI+  CK  R+E+A  + + M+  G+ PD  TY  ++    
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFC 558

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           ++G+++   +I+  +  NG    +VTY  L+G LCK G+   A  LL  + +M+     P
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSV-QMKGMVLTP 617

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------------- 515
               YN +I+  C++ + ++A  L  E++EKG  P+  TY+IV                 
Sbjct: 618 Q--AYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF 675

Query: 516 --EMMEKGFIPD 525
             EM+EKG +P+
Sbjct: 676 TVEMLEKGILPE 687



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 216/416 (51%), Gaps = 12/416 (2%)

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           I+     C D +  N+++  +    ++K      G E      + G +  V + N L+  
Sbjct: 292 IYEEEGFCPDQVTFNALVNGLCRTGHIKQ-----GLEMMDFMLEKGFELDVYTYNSLISG 346

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L K G+ ++   +   M  R  E N  ++N ++  LCK   +  A+++   + S GV P 
Sbjct: 347 LCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPD 406

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V T+N LI G C          A  +F++M E G  P+E T++ LI+  C +  +  A+ 
Sbjct: 407 VCTFNSLIQGLCLTSN---REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + +EM   G A  VV YN+LI+GLC + ++ +A  + D+M   G+  + VT N LING C
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K K VE+A  L D +  +GL P   TY T++  +C++G ++ A  +  +M   G  PD+ 
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  LI GL + G V+    ++  +   GM      YN ++ ALCK  ++K+A+ L  EM
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQ-KGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             MEK    P+++TY ++ +G C   G +++A     E+LEKG++P   ++  + E
Sbjct: 644 --MEKGDP-PDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAE 696



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 229/480 (47%), Gaps = 28/480 (5%)

Query: 33  ILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKI-RSFLHMFVK 91
           +L L     D    L  F W++ +   S                  +P +    L    +
Sbjct: 62  LLDLLRRQPDSSSALSLFQWASAQPNYS-----------------AHPSVFHELLRQLAR 104

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
            G F S+ T+   + +    +  ++ +I +   A   ++   +         D+ +K   
Sbjct: 105 AGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDT 164

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
              N  L  LVK  K + VE ++ +M    +  ++ +FN ++  LCKA +L  A  ++ED
Sbjct: 165 RFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLED 224

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M + G+ P   T+  L+ G+ ++  +    +   +   MVE+G     V+ N L++G CK
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKEL---MVESGCELTSVSVNVLVNGLCK 281

Query: 272 DENISAAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +  I  A++ ++EE    G     VT+N+L+NGLC  G + + + + D M+  G + +V 
Sbjct: 282 EGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+LI+G CK   +++A  +   +  +   P+ +TYNTLI   CKE  +E A  +   +
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             +GVLPDV T+N LI GL    N E    +  E+   G      TY+IL+ +LC + + 
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           K+A+ LL E   ME      N+V YN LI G C+  ++ DA  + +++   G+  +  TY
Sbjct: 459 KEALMLLKE---MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 204/430 (47%), Gaps = 49/430 (11%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF------ 189
           F+      +Y    SV   ++LLR L + G F+ +  + ++M   +I ++  +F      
Sbjct: 79  FQWASAQPNYSAHPSVF--HELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLET 136

Query: 190 -------------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
                                          N  L+ L KA KL     +   M +  V 
Sbjct: 137 YATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVP 196

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V T+NILI   CK     ++  A  + +DM   G+ P+E TF TL+ GF ++ ++  A
Sbjct: 197 PDVSTFNILIRALCKAH---QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGA 253

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +++ E M   G     V+ N L+NGLC +G+++EA  LR      G  P+ VT NAL+NG
Sbjct: 254 LRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA--LRFIYEEEGFCPDQVTFNALVNG 311

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            C+   +++   + D + E+G    V TYN+LI   CK G +++A  + + M+ R   P+
Sbjct: 312 LCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             TYN LI  L +E +VE    +   L + G+   + T+N L+  LC     + A+ L +
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431

Query: 459 EMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           EM    KEK   P+  TY++LI+  C + +L++A  LL E+   G   N   Y  + + +
Sbjct: 432 EM----KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGL 487

Query: 518 MEKGFIPDIE 527
            +   + D E
Sbjct: 488 CKNNRVGDAE 497



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 170/337 (50%), Gaps = 6/337 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  E F+   + G      + + L+ +L  E + ++   + KEM+      N+  +N ++
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLI 484

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCK  ++  A DI + M+ LGVS   VTYN LI+G CK     ++ +A  +   M+  
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS---KRVEEAAQLMDQMIME 541

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P++ T+ T++  FC+  +I  A  + + M  +G    +VTY +LI GLC  G++D A
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L   +   G+       N +I   CK+K  ++A  LF ++ E+G  P VITY  +   
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRG 661

Query: 374 YCK-EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            C   G +++A      ML++G+LP+  ++  L  GL      + +  ++N ++  G R 
Sbjct: 662 LCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG-RF 720

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
                +I+ G L K  K   A++ L  +   +K +++
Sbjct: 721 SQSETSIIRGFL-KIQKFNDALANLGAILDRKKPRRF 756



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 10/290 (3%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS C+    RN ++ + L+    KN +     + F +    G+  S ++ N L+  L K 
Sbjct: 470 LSGCA----RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS 525

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            + E+   +  +M    ++ +  ++  +L   C+ G + +A+DI+++M   G  P +VTY
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTY 585

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             LI G CK G +     A  + + +   G++     +N +I   CK +    AM++F E
Sbjct: 586 GTLIGGLCKAGRVD---VASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642

Query: 285 MGSHGIAAGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           M   G    V+TY  +  GLC   G + EAV    EM+  G+ P   +   L  G C   
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLS 702

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           + +    L + + E+G      +  ++I  + K  +  DA A   ++LDR
Sbjct: 703 MEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDALANLGAILDR 750


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 238/473 (50%), Gaps = 14/473 (2%)

Query: 43  PVLILRYFCWSTKELRASHSLL-LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSV--S 99
           P L+L +F WS+ +L  S         L  SL     +      L   ++      V  +
Sbjct: 101 PKLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA 160

Query: 100 TIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           +I  ALS   DS  R+  ++D+L+  Y K+ +     E      D G+  S+  CN LL+
Sbjct: 161 SIHRALS---DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLK 217

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L++      +  V + M    I  ++ +++ ++   CK  + + A  ++ +M+  G   
Sbjct: 218 DLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 277

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             VTYN+LI G C+ G + + +      KDM + G++P+  T+  LI+G CK    + A 
Sbjct: 278 NTVTYNVLIAGLCRSGAVEEAF---GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 334

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            + +EM    +   VV Y +LI+G   +G  DEA  +  EM+A+G++PN +T + L+ G 
Sbjct: 335 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 394

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           CK   +++A +L   +      P  ITYN +I+ + +    +DAF + + M + G+ P+V
Sbjct: 395 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 454

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TY+ +I GL + G  E   +++ E+   G++     Y  L+   C++G     VSL  E
Sbjct: 455 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN----VSLACE 510

Query: 460 MF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +F KM K    P++  YN LI G  + G++E++     ++ E+GL+PN+ TY 
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 563



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 215/427 (50%), Gaps = 22/427 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++   L+  +++       F+  K     G++ + ++ + L+R L K G+ +    + 
Sbjct: 348 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 407

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M R     +  ++N ++ G  +      A  ++ +M++ G+SP V TY+I+I G C+ 
Sbjct: 408 KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 467

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +  KA  + ++M   G+ PN   +  LI G+C++ N+S A ++F++M    +   +
Sbjct: 468 G---EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 524

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             YNSLI GL   G+++E+     +M   GL PN  T + LI+G+ K   +E A  L   
Sbjct: 525 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 584

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + + GL P+ + Y  L+++Y K   +E   +   SMLD+GV+ D   Y  LI  LS  GN
Sbjct: 585 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 644

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E    +++ +  NG    +  Y+ L+  LCK    +KA  +LDE   M K+   PNIV 
Sbjct: 645 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE---MSKKGVDPNIVC 701

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMM 518
           YN LI G C+ G +  A  + N +L KGL+PN  TY                  +  EM+
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761

Query: 519 EKGFIPD 525
             G  PD
Sbjct: 762 ATGITPD 768



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 12/460 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RLL  +  A   P + ++   +H   ++G+    S +   ++T    L  N+ +   L+ 
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT--KGLKPNAFVYAPLIS 497

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +     L  E F +     +   +   N L+  L K G+ E+    + +M+ R +  
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 557

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +++ +++G  K G L  A  +++ M   G+ P  V Y  L++ Y K   I K+    
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV---S 614

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           + FK M++ G++ +   +  LI       N+ AA +V   +  +G    V  Y+SLI+GL
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C     ++A  + DEM   G+ PN+V  NALI+G CK   +  AR +F+ I  +GL P+ 
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY +LID  CK G + +AF + N ML  G+ PD   Y+ L  G S  G++E    ++ E
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G  A + ++N LV   CK GK ++ + LL  +         PN +T   +I G  +
Sbjct: 795 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSE 850

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
            GKL + + +  EL +K        +  +  +M+ +G IP
Sbjct: 851 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 890



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 214/439 (48%), Gaps = 76/439 (17%)

Query: 161 LVKEGKF-----EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+ EG F     +D   +  EM+   I  N+ +++ +++GLC++G+  KASD++E+M + 
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483

Query: 216 GVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKA 243
           G+ P    Y  LI GYC++G +                                G++ ++
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV---------------------- 281
              F  M E G+LPNE T++ LI G+ K+ ++ +A ++                      
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603

Query: 282 -------------FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
                        F+ M   G+      Y  LI+ L   G ++ A  +   +  +G  P+
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V   ++LI+G CK    EKA  + D++S++G+ P+++ YN LID  CK G +  A  + N
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           S+L +G++P+  TY  LI G  + G++     + NE++  G+      Y++L       G
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             ++A+ L++EMF     +   +I ++N L+ GFC++GK+++   LL+ ++ +GL+PN  
Sbjct: 784 DLEQAMFLIEEMFL----RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839

Query: 509 TYQIVREEMMEKGFIPDIE 527
           T + +   + E G + ++ 
Sbjct: 840 TIENIISGLSEAGKLSEVH 858



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 208/434 (47%), Gaps = 29/434 (6%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N      L+  Y+KN       +  +R  D GLK + +    LL +  K    E V 
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
             +K M  + + L+   +  +++ L  +G +  A  ++  ++  G  P V  Y+ LI G 
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK        KA  +  +M + G+ PN V +N LIDG CK  +IS A  VF  + + G+ 
Sbjct: 675 CKTA---DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 731

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY SLI+G C  G +  A  L +EM+A+G+ P+    + L  G      +E+A  L
Sbjct: 732 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 791

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++  +G + S+ ++N L+D +CK G+M++   + + ++ RG++P+  T   +I+GLS 
Sbjct: 792 IEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 850

Query: 412 EGNVEGVRNIMNEL-------------------VNNGMRAGLVTYNILVGALCKDGKSKK 452
            G +  V  I  EL                   +N G +  L   + ++   CK+G   K
Sbjct: 851 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDK 909

Query: 453 AVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           A+ L D +      K  P    +Y  ++   C+KGKL +A  LL E+ ++G+ P++    
Sbjct: 910 ALMLRDVIVA----KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCL 965

Query: 512 IVREEMMEKGFIPD 525
           I+   +   G+I +
Sbjct: 966 ILLTNLHTSGYIQE 979



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 170/429 (39%), Gaps = 92/429 (21%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++KNG   S   +   +      L  N +I   L+ +Y K+         FK   D
Sbjct: 565 LIHGYLKNGDLESAEQLVQRM--LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+         L+  L   G  E    V   +++     ++  ++ +++GLCK     K
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 682

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I+++M   GV P +V YN LIDG CK G I     A  VF  ++  G++PN VT+ +
Sbjct: 683 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY---ARNVFNSILAKGLVPNCVTYTS 739

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIA--------------------------------- 291
           LIDG CK  +IS A  ++ EM + GI                                  
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799

Query: 292 -AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF----------- 339
            A + ++N+L++G C  GK+ E + L   +M  GL PN +T   +I+G            
Sbjct: 800 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 859

Query: 340 ------------------------------------------CKKKLVEKARVLFDDISE 357
                                                     CK+  ++KA +L D I  
Sbjct: 860 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVA 919

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +       +Y  ++D  C++G++ +A  +   M  RG+ P  +    L+  L   G ++ 
Sbjct: 920 KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQE 979

Query: 418 VRNIMNELV 426
              +++ ++
Sbjct: 980 HNTVLDNML 988



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 56/181 (30%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           SP+V+  + L+D Y K GR++DA  +   M DRG+ P +   N L+  L R   +  +  
Sbjct: 173 SPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWK 230

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +   +V  G+                                       P++ TY+ LI+
Sbjct: 231 VREFMVGAGIS--------------------------------------PDVYTYSTLIE 252

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIP 524
            +C+  + + A  +L E+ E+G   N  TY ++                +++M + G +P
Sbjct: 253 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 312

Query: 525 D 525
           D
Sbjct: 313 D 313


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 228/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   YKE+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    V + +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +   L D++S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E++N G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ + 
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVI 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++ V ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K+    NI    V Y  LI G 
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKQMIQENIRLDEVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKG 401



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYKEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V    LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++    + 
Sbjct: 246 NGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++       +++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLNVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 3/228 (1%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +  ++ LI      G L +A+                T   ++    K K  +     + 
Sbjct: 72  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYK 131

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +I E G   S+  +N L+  +CK+G +  A ++ +++   G+ P V +YN L+ G  R G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + + ++ +G++  + TY++L+  LCK+ K   A  L DEM     +   PN V
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV---KGLVPNGV 248

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +  LI G C+ G+++ A  +  ++L + L+P+  TY  +   + +KG
Sbjct: 249 IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 216/414 (52%), Gaps = 39/414 (9%)

Query: 144 DYGLKS----SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           DY ++S    + + CN+++   V+  + +    +Y++M+ RRI LN+ SFN ++   C  
Sbjct: 95  DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK------------MYKADAVF 247
            KL+ +      +  LG  P VVT+N L+ G C +  I +              +A A+F
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MVE G+ P  +TFNTLI+G C +  +  A  +  +M   G+   VVTY +++NG+C  
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A+ L  +M  + +KP+VV  +A+I+  CK      A+ LF ++ E+G++P+V TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +ID +C  GR  DA  +   M++R + PDV T+N LI+   +EG +     + +E+++
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +    VTYN ++   CK  +   A  + D M         P++VT+N +I  +C+  +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKR 447

Query: 488 LEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
           +++   LL E+  +GL+ N TTY                Q + +EM+  G  PD
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 223/420 (53%), Gaps = 45/420 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + GL   V++ N L+  L  EG+  +   +  +M  + + +++ ++  ++NG+CK
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--VFKDMVENGIL 256
            G    A +++  M+   + P VV Y+ +ID  CK G     + +DA  +F +M+E GI 
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG-----HHSDAQYLFSEMLEKGIA 328

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  T+N +IDGFC     S A ++  +M    I   V+T+N+LI+    +GKL EA  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM+   + P+ VT N++I GFCK    + A+ +FD ++    SP V+T+NT+ID YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             R+++   +   +  RG++ + +TYN LI G     N+   +++  E++++G+    +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEK---------------------EKKW------ 469
            NIL+   C++ K ++A+ L  E+ +M K                     ++ W      
Sbjct: 505 CNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 470 ------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                 P++ TYNV+I GFC K  + DAN L +++ + G  P+ +TY  +    ++ G I
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 206/396 (52%), Gaps = 20/396 (5%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G   D +Y++ EM  + I  N+ ++N +++G C  G+ + A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P V+T+N LI    K+G   K+++A+ +  +M+   I P+ VT+N++I
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFCK      A  +F+ M S      VVT+N++I+  C   ++DE + L  E+   GL 
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N  T N LI+GFC+   +  A+ LF ++   G+ P  IT N L+  +C+  ++E+A  +
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +    +  D   YN +I G+ +   V+   ++   L  +G+   + TYN+++   C 
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC- 583

Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               K A+S  + +F KM+     P+  TYN LI+G  + G+++ +  L++E+   G   
Sbjct: 584 ---GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 506 NQTTYQIVR--------EEMMEKGFIPDIEGHMYNI 533
           +  T ++          EE++E    P I G   +I
Sbjct: 641 DAFTIKMAEEIICRVSDEEIIENYLRPKINGETSSI 676



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 20/295 (6%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DA+  F  MV +      V  N +I  F +      A+ ++ +M    I   + ++N LI
Sbjct: 89  DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
              C   KL  +++   ++   G +P+VVT N L++G C +  + +A             
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208

Query: 350 ---VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
               LFD + E GL+P VIT+NTLI+  C EGR+ +A A+ N M+ +G+  DV TY  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G+ + G+ +   N+++++    ++  +V Y+ ++  LCKDG    A  L  EM    ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML---EK 325

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              PN+ TYN +I GFC  G+  DA  LL +++E+ + P+  T+  +    +++G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 69/283 (24%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A+   D M+ S      V  N +I  F +    + A  L+  +  + +  ++ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST---------------------------- 401
           LI  +C   ++  + +    +   G  PDV T                            
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 402 ----------------------YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
                                 +N LI GL  EG V     ++N++V  G+   +VTY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +V  +CK G +K A++LL    KME+    P++V Y+ +I   C+ G   DA  L +E+L
Sbjct: 267 IVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 500 EKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
           EKG+ PN  TY                Q +  +M+E+   PD+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/149 (18%), Positives = 68/149 (45%), Gaps = 2/149 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+ F +N K      +F  +      L  +++  ++++    K  K    ++ F     
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G++  V + N ++     +    D   ++ +MK    E +  ++N ++ G  KAG+++K
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + +++ +M+S G S    T  +  +  C+
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMAEEIICR 654


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 242/456 (53%), Gaps = 11/456 (2%)

Query: 73  LVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           ++  +  P I  F   L  F K   +++  ++ H L      +  + I +++L+  +   
Sbjct: 50  MLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL--KGIQPDLITLNILINCFCHM 107

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            +   GF    +    G     ++ N L++ L  +G+ +   + + ++  +  +LN  S+
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++NG+CK G    A   +  +      P VV YN +ID  CK   + + Y    +F +
Sbjct: 168 ATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY---GLFSE 224

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI  + VT+NTLI GFC    +  A+ +  EM    I   V TYN L++ LC +GK
Sbjct: 225 MAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA ++   M+ + +KP+V+T + L++G+     V+KA+ +F+ +S  G++P V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +CK   +++A  +   M  + ++P + TY+ LI GL + G +  V ++++E+ + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
             A ++TY+ L+  LCK+G   +A++L +   KM+ ++  PNI T+ +L+ G C+ G+L+
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFN---KMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           DA  +  +LL KG   N  TY ++     ++G + +
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 197/357 (55%), Gaps = 6/357 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V+  N ++ A+ K     +   ++ EM  + I  ++ ++N ++ G C  GKL +A  
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIG 255

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    ++P V TYNIL+D  CK+G   K+ +A +V   M++  + P+ +T++TL+D
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEG---KVKEAKSVLAVMLKACVKPDVITYSTLMD 312

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V TY  LING C +  +DEA+ L  EM    + P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            +VT ++LI+G CK   +     L D++ ++G    VITY++LID  CK G ++ A A+ 
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M D+ + P++ T+  L+ GL + G ++  + +  +L+  G    + TYN+++   CK 
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           G  ++A+++L    KME     PN  T+  +I    +K + + A  LL +++ +GL+
Sbjct: 493 GLLEEALTMLS---KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 3/249 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +N+  A+  F  M        ++ +N +++          AV+L   +   G++P+++T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LIN FC    +     +   I ++G  P  +T NTLI   C +G+++ A    + +L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G   +  +Y  LI G+ + G+       + ++     +  +V YN ++ A+CK     +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L  E   M  +    ++VTYN LI GFC  GKL++A GLLNE++ K + PN  TY I
Sbjct: 218 AYGLFSE---MAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 513 VREEMMEKG 521
           + + + ++G
Sbjct: 275 LVDALCKEG 283



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G  + V++ + L+  L K G  +    ++ +MK + I  N+ +F  +L+GLCK G+L 
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ +D+ + G    V TYN++I+G+CK+   G + +A  +   M +NG +PN  TF 
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ---GLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 264 TLIDG-FCKDENISAAMKVFEEMGSHGI 290
           T+I   F KDEN   A K+  +M + G+
Sbjct: 519 TIIIALFKKDEN-DKAEKLLRQMIARGL 545



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 3/168 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P +I +N ++D++ K      A ++ + +  +G+ PD+ T N LI      G +    +
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ +++  G     VT N L+  LC  G+ KKA+   D   K+  +    N V+Y  LI 
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD---KLLAQGFQLNQVSYATLIN 172

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           G C+ G    A   L ++  +   P+   Y  + + M +   + +  G
Sbjct: 173 GVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 210/394 (53%), Gaps = 14/394 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +E F +    G+   + + N+L+  L K+G  ++ E +  ++ +  +  NL +FN  + 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 195 GLCKAG-------KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           GLC+ G       K+ +A + +  M + G+ P   TYN +I GY K   +GK+  A  + 
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK---VGKIQDASRIL 316

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           KD    G +P+E T+ +LI G C+D +I  A+ +FEE    G+   +V YN+LI GL   
Sbjct: 317 KDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQ 376

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G + +A+ L ++M   G+ P++ T N +ING CK   V  A  L +    +G  P + T+
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTF 436

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NTLID YCK  +M++A  + +SM   GV PDV TYN ++ GL +    E V      ++ 
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    ++TYNIL+ +LCK  K  +A+ LL+E   +      P+ V++  +I GFC  G 
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEE---IRNRGLIPDPVSFGTVISGFCNNGD 553

Query: 488 LEDANGLLNELLEKGLIPNQ-TTYQIVREEMMEK 520
           L++A  L   + ++  I +   TY I+     EK
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEK 587



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 245/547 (44%), Gaps = 96/547 (17%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
           DP+  L  F    KE    H+ L   R++  L                  +G+F ++  +
Sbjct: 19  DPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGF----------------HGEFDAMERV 62

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
              +    D+     + +   M  Y +  K     + F+R   Y  + S+ S N ++  L
Sbjct: 63  LMEMRLNVDNSLLEGVYVSA-MRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNIL 121

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS------- 214
           V+ G F     VY  MK   I  ++ +F   +   C+  +   A  ++ +M S       
Sbjct: 122 VEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNA 181

Query: 215 ----------------------------LGVSPKVVTYNILIDGYCKKGGI--------- 237
                                       LG+ P + T+N L+   CKKG +         
Sbjct: 182 VVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNK 241

Query: 238 ------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLID 267
                                          K+ +A+     MV  G+ P++ T+NT+I 
Sbjct: 242 VLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIY 301

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K   I  A ++ ++    G      TY SLI G+C DG +D A+AL +E +  GLKP
Sbjct: 302 GYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKP 361

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++V  N LI G  ++ LV KA  L +D+S++G+SP + TYN +I+  CK G + DA  + 
Sbjct: 362 SIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL 421

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N+ + +G LPD+ T+N LI G  +   ++    I++ + ++G+   ++TYN ++  LCK 
Sbjct: 422 NAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKA 481

Query: 448 GKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            K +  +    E FKM  EK   PNI+TYN+LI+  C+  K+ +A  LL E+  +GLIP+
Sbjct: 482 AKPEDVM----ETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537

Query: 507 QTTYQIV 513
             ++  V
Sbjct: 538 PVSFGTV 544



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 176/325 (54%), Gaps = 4/325 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+ A   GLK S++  N L++ L ++G       +  +M +  +  ++ ++N V+NGLCK
Sbjct: 351 FEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCK 410

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G ++ A++++    + G  P + T+N LIDGYCK+    KM  A  +   M  +G+ P+
Sbjct: 411 MGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL---KMDNAIGILDSMWSHGVTPD 467

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+N++++G CK       M+ F+ +   G    ++TYN LI  LC   K+ EA+ L +
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKE 377
           E+   GL P+ V+   +I+GFC    +++A  LF  + +Q  +  +V TYN +I+A+ ++
Sbjct: 528 EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEK 587

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             M+ A  + + M D+G  PD  TY  +I G  + GNV    + + + +  G    L T+
Sbjct: 588 LDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
             ++  LC   +  +AV ++  M +
Sbjct: 648 GRVINCLCVQHRVHEAVGIVHLMVR 672



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 6/255 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           + L+  Y K +K             +G+   V++ N +L  L K  K EDV   +K +  
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +    N+ ++N ++  LCKA K+ +A D++E++++ G+ P  V++  +I G+C  G + +
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556

Query: 240 MYKADAVFKDMVENGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            Y+   +F+ M +   + + V T+N +I+ F +  ++  A K+F EMG  G      TY 
Sbjct: 557 AYQ---LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +I+G C  G ++       + +  G  P++ T   +IN  C +  V +A  +   +   
Sbjct: 614 VMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRT 673

Query: 359 GLSPSVITYNTLIDA 373
           G+ P  +   T+ DA
Sbjct: 674 GVVPEAVV--TIFDA 686



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 12/263 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S  S  +  + I  + ++    K  KP    E FK   + G   ++++ N L+ +L K  
Sbjct: 458 SMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKAR 517

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTY 224
           K  +   + +E++ R +  +  SF  V++G C  G L++A  +   M +   +   V TY
Sbjct: 518 KVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATY 577

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           NI+I+ + +K     M  A  +F +M + G  P+  T+  +IDGFCK  N+++      +
Sbjct: 578 NIMINAFSEK---LDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLK 634

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
               G    + T+  +IN LCV  ++ EAV +   M+ +G+ P  V +  + +    KK 
Sbjct: 635 EIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVT--IFDA--DKKA 690

Query: 345 VEKARVLFDDISEQGLSPSVITY 367
           V   +++ +D+    L  S ITY
Sbjct: 691 VAAPKIIVEDL----LKKSHITY 709



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 3/162 (1%)

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            Y + +  Y ++G++++A  +   M      P + +YN ++  L   G       +   +
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G+   + T+ I + + C+  +   A+ LL+ M     E    N V Y  +I GF ++
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL---NAVVYCTVISGFYEE 194

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               +A  L N++L  G+ P+  T+  +   + +KG + + E
Sbjct: 195 NYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGE 236


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 212/393 (53%), Gaps = 22/393 (5%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N LL AL K G+ E+ + +++E+K  +   ++ S++ ++N L +AGK   A +++
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            +M++ G  P + TYN L+D     G  G+  +A  +  +M +NG +P+  T+N LI   
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCL---GKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K   +S A  +F EM   G      TYNSLI GL   G+  +A+ L +EM   G  P+V
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T ++LI G  K     KA  LF ++  +G  P  IT+  L+DA  K GR++DA  + + 
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +RGV P V TYN LIAG  + G++    N+++E+  NG +  +VTY+ L+  L K  +
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  +L    KMEKE   P+ +TYN LI G  + G L DA  L + +  KG  P+  T
Sbjct: 305 LDEACQVLK---KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361

Query: 510 YQ----------------IVREEMMEKGFIPDI 526
           Y                 ++ EEM   G  PD+
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDL 394



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 224/447 (50%), Gaps = 15/447 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L   L  AK  P + S+   ++   + GK+ +   +   +    C  +L   + ++D L 
Sbjct: 31  LFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLG 90

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            A        L   A  R  D G    V + N L+  L K G+  +   ++ EM+ R   
Sbjct: 91  KA--GQFDEALRLLAEMR--DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV 146

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  ++N ++ GL K G+  KA +++E+M+  G  P V+TY+ LI G  K G   K +K 
Sbjct: 147 PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFK- 205

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +F++M   G  P+ +TF  L+D   K   +  A+++ +EM   G+  GVVTYN+LI G
Sbjct: 206 --LFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
               G L EA  L DEM  +G KP+VVT + LI G  K   +++A  +   + ++G  P 
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            ITYNTLI+   K G + DA  + + M  +G  PDV TY+ LI  L +   VE    +  
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+ + G++  L TY  ++  L K G+   A  L  E   M  +   P+++TYN  +    
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE---MRGKGLSPDVITYNAFLNSLG 440

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTY 510
           + G+ ++A  +  ++ E GL+P+  TY
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATY 467



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 228/461 (49%), Gaps = 28/461 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTC--SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S L+   K G+      +F  L     +  +   S +I+ L  A     K     E    
Sbjct: 14  SLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRA----GKWEAALEVVAE 69

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G K ++ + N L+  L K G+F++   +  EM+      ++ ++N +++ L KAG+
Sbjct: 70  MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           L++A  +  +M+  G  P   TYN LI G    G +G+  KA  + ++M  +G  P+ +T
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGL---GKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +++LI G  KD     A K+F+EM   G     +T+ +L++ L   G++D+A+ L DEM 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+KP VVT NALI GF K   + +A  L D++   G  P V+TY+ LI    K  +++
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   M   G  PD  TYN LI GL + G +     + + + + G    +VTY+ L+
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            AL K  + + A  L +E   ME     P++ TY  +I    + G+++DA+ L +E+  K
Sbjct: 367 TALGKAARVESACVLFEE---MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 502 GLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           GL P+  TY                  + E+M E G +PD+
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 233/489 (47%), Gaps = 36/489 (7%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC-RNSIIIDMLMLAY 126
           RLL  +      P +R++  +    GK   +S  F   +   +  C  ++   + L+   
Sbjct: 100 RLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGL 159

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K  +     E  +    +G    V++ + L+  L K+G+      +++EMKRR  + + 
Sbjct: 160 GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +F  +++ L KAG+++ A +++++MK  GV P VVTYN LI G+   G +G + +A  +
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF---GKVGDLVEAYNL 276

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +M  NG  P+ VT++ LI G  K   +  A +V ++M   G     +TYN+LINGL  
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK 336

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L++A  L D M + G  P+VVT + LI    K   VE A VLF+++   G+ P + T
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y ++I    K G+++DA  + + M  +G+ PDV TYN  +  L R G  +  R I  ++ 
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM----------------------- 463
            +G+   + TY+ L+  L K  +   A  LL E+ +                        
Sbjct: 457 ESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVD 516

Query: 464 ---------EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                      +  WP   +YN LI    + G++ +A   L +L E+G  P+  +Y  + 
Sbjct: 517 EAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLI 576

Query: 515 EEMMEKGFI 523
             + + G I
Sbjct: 577 SALGQTGQI 585



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 213/407 (52%), Gaps = 6/407 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +SI    LM A  K  +     E      + G+K  V++ N L+    K G   +   + 
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EMKR   + ++ +++ ++ GL KA +L++A  +++ M+  G  P  +TYN LI+G    
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGL--- 334

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  G +  A  +F  M   G  P+ VT++TLI    K   + +A  +FEEM S GI   +
Sbjct: 335 GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL 394

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY S+I  L   G++D+A  L  EM   GL P+V+T NA +N   +    ++AR +F+D
Sbjct: 395 FTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFED 454

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E GL P V TY+ L+    K   ++DA  +   ++++G   D   ++  +  L+  GN
Sbjct: 455 MKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGN 514

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+    ++    + G+  G  +YN L+ AL K G+  +A + L++   ++++   P+IV+
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED---LKEQGGKPDIVS 571

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           Y+ LI    Q G+++ A  LL E+ ++GL  +  +Y  +  ++ + G
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 156/293 (53%), Gaps = 6/293 (2%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP VVTYN L++   K G   +  +A  +F+++      P+ V+++ LI+   +     A
Sbjct: 6   SPNVVTYNSLLNALAKAG---QCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A++V  EM + G    + TYN+L++ L   G+ DEA+ L  EM  +G  P+V T N LI+
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
              K   + +A  LF ++ E+G  P   TYN+LI    K GR + A  +   M   G  P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV TY+ LI GL ++G       +  E+   G +   +T+  L+ AL K G+   A+ LL
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           DEM   E+  K P +VTYN LI GF + G L +A  LL+E+   G  P+  TY
Sbjct: 243 DEM--KERGVK-PGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/599 (27%), Positives = 269/599 (44%), Gaps = 70/599 (11%)

Query: 1   PFCSANSTI-----EDITELIRNHHWSKLK-------NTDPNTVILQLFNSDADPVLILR 48
           PF + +S +       I ++I+   W+  K       +  P  V   L     DP L L+
Sbjct: 55  PFITQSSFLGQLDKASIIKIIQQDQWNDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALK 114

Query: 49  YFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTC 108
           +F W+  +     +      L+H L  A+ Y     FL   + + +      +F  L + 
Sbjct: 115 FFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWST 174

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
            +       + D L   +++        + F R   + +     SCN  L  L K GK +
Sbjct: 175 RNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGD 234

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
                +++M    I  ++ ++N ++  +CK G +  A  +   MK +G++P +VTYN LI
Sbjct: 235 LSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLI 294

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGY   G +G + ++  +F++M + G  P+ +T+N LI+ FCK E +  A     EM + 
Sbjct: 295 DGY---GKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS 351

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   VVTY++LI+ LC +  L +A+    +M   GL PN  T  +LI+  CK   +  A
Sbjct: 352 GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDA 411

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL--- 405
             L D++ +  +  +V+TY TL+D  CKEGRM +A  +  +M+  GV P++ TY  L   
Sbjct: 412 LKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHG 471

Query: 406 --------------------------------IAGLSREGNVEGVRNIMNELVNNGMRAG 433
                                           I GL  +  +E    +M+E+   G+RA 
Sbjct: 472 HIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRAN 531

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            V Y I + A  K GK+ +A++LL EM  +  E     IVT+ VLI G C+KG +E+A  
Sbjct: 532 SVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEV---TIVTFCVLIDGLCKKGLVEEAID 588

Query: 494 LLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFIPDIEGHMYNISG 535
               + +  L PN                     + + +EM +K  +PD   +   I G
Sbjct: 589 YFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 215/441 (48%), Gaps = 8/441 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYV 127
           L H +      P I ++  +    GK   +   F       D  C   +I  + L+  + 
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +    F       + GLK +V++ + L+ AL KE   +       +M+R  +  N  
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  +++  CKAG L+ A  + ++M  + V   VVTY  L+DG CK+G   +M +A+ +F
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEG---RMMEAEDLF 450

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + M++ G+ PN  T+  L+ G  K++ +  A+++ +E+    I   ++ Y ++I GLC  
Sbjct: 451 RAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQ 510

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            KL+E   +  EM A G++ N V     ++ + K     +A  L  ++ + G+  +++T+
Sbjct: 511 NKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTF 570

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD-VSTYNCLIAGLSREGNVEGVRNIMNELV 426
             LID  CK+G +E+A      M D  + P+ V+    LI GL +   +E  + + +E+ 
Sbjct: 571 CVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           +  M    + Y  L+    K    ++A+++   M ++  E    ++  Y  L+ G  Q  
Sbjct: 631 DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMEL---DLHAYTSLVWGLSQGN 687

Query: 487 KLEDANGLLNELLEKGLIPNQ 507
            ++ A   LNE++ KG++P++
Sbjct: 688 LVQQARMFLNEMIGKGIVPDE 708



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 51/427 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L++     ++ PK   FLH    +G   +V T     ST  D+LC+  ++   +   ++ 
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTY----STLIDALCKEHMLQQAI--KFLL 381

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +M+              GL  +  +   L+ A  K G   D   +  EM + ++  N+ +
Sbjct: 382 DMR------------RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVT 429

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------- 237
           +  +L+GLCK G++ +A D+   M   GV+P + TY  L+ G+ K   +           
Sbjct: 430 YTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIK 489

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                 K+ + + V  +M   GI  N V +   +D + K     
Sbjct: 490 EKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTV 549

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN-VVTSNAL 335
            A+ + +EM   G+   +VT+  LI+GLC  G ++EA+     M    L+PN V    AL
Sbjct: 550 EALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTAL 609

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G CK   +E A+ LFD++ ++ + P  I Y  LID   K    ++A  +R+ M + G+
Sbjct: 610 IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGM 669

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
             D+  Y  L+ GLS+   V+  R  +NE++  G+    +    L+    + G   +A+ 
Sbjct: 670 ELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIE 729

Query: 456 LLDEMFK 462
           L DE+ K
Sbjct: 730 LHDELLK 736



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 4/238 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++  L  + K E+ E+V  EMK   I  N   +   ++   K GK  +A +++++M  LG
Sbjct: 503 IIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT-LIDGFCKDENI 275
           V   +VT+ +LIDG CKKG + +   A   F  M +  + PN V   T LIDG CK+  I
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEE---AIDYFARMADFNLQPNNVAVCTALIDGLCKNNYI 619

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            AA K+F+EM    +    + Y +LI+G        EA+ +R  M   G++ ++    +L
Sbjct: 620 EAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSL 679

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           + G  +  LV++AR+  +++  +G+ P  I    L+  Y + G +++A  + + +L +
Sbjct: 680 VWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 232/443 (52%), Gaps = 11/443 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           F K  +      +F A+    D  CR N +   +L+  Y K+ +   G    +     GL
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGD--CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL 216

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K+ V   + L+ A   EG  E    ++ EM RR++  N+ +++ ++ GL + G+  +AS+
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++DM + GV P VV Y +L DG CK G  G   K   V   MV+ G  P  +T+N +++
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIK---VLDLMVQKGEEPGTLTYNVVVN 333

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--GL 325
           G CK++ +  A  V E M   G     VTYN+L+ GLC  GK+ EA+ L   +++    +
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+V T N LI G CK+  V  A  +   + E GL  +++TYN LI+ Y    ++ +A  
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +    ++ G  P+  TY+ +I GL +   +   R +  ++ ++G+R  ++ YN L+ +LC
Sbjct: 454 LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLC 513

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++   ++A SL  EM  +       ++V++N++I G  + G ++ A  LL+E+    L+P
Sbjct: 514 REDSLEQARSLFQEMRNVNHN---VDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570

Query: 506 NQTTYQIVREEMMEKGFIPDIEG 528
           +  T+ I+     + G + +  G
Sbjct: 571 DAVTFSILINRFSKLGMLDEAMG 593



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 186/342 (54%), Gaps = 7/342 (2%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS--LGVSPKVVTYNILIDGYCKK 234
           M +R   +N+ + N VL G C++G+ +KA  +   MK     V P  VTYN L++G+CK 
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162

Query: 235 GGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               ++ +A  +F+ M + G   PN VT++ LID +CK   +   + + EEM   G+ A 
Sbjct: 163 K---RLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V  Y+SLI+  C +G ++    L DEM+   + PNVVT + L+ G  +     +A  +  
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           D++ +G+ P V+ Y  L D  CK GR  DA  + + M+ +G  P   TYN ++ GL +E 
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    ++  +V  G +   VTYN L+  LC  GK  +A+ L  ++   EK    P++ 
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW-KLLLSEKFHVKPDVF 398

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           T N LI+G C++G++ DA  + + ++E GL  N  TY  + E
Sbjct: 399 TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIE 440



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 175/335 (52%), Gaps = 9/335 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++ L KA + +    +   M S  V P+  + + L + +         +   +V   M 
Sbjct: 48  LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAF---SVLSLMT 104

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH--GIAAGVVTYNSLINGLCVDGK 309
           + G   N    N ++ GFC+      AM +F +M  +   +    VTYN+L+NG C   +
Sbjct: 105 KRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKR 164

Query: 310 LDEAVALRDEMMASG-LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           L EA  L + M   G  +PN+VT + LI+ +CK   V +   L +++  +GL   V  Y+
Sbjct: 165 LAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYS 224

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +LI A+C EG +E    + + ML R V P+V TY+CL+ GL R G       ++ ++   
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+R  +V Y +L   LCK+G++  A+ +LD M +  +E   P  +TYNV++ G C++ ++
Sbjct: 285 GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE---PGTLTYNVVVNGLCKEDRM 341

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +DA G++  +++KG  P+  TY  + + +   G I
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 161/302 (53%), Gaps = 5/302 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF--NFVLNGLCKAGKLN 203
           G K   ++ N LL+ L   GK  +   ++K +   +  +  D F  N ++ GLCK G+++
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ I   M  +G+   +VTYN LI+GY       K+ +A  ++K  VE+G  PN +T++
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYL---AARKLIEALKLWKYAVESGFSPNSMTYS 471

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+G CK + +S A  +F +M   GI   V+ YN+L+  LC +  L++A +L  EM   
Sbjct: 472 VMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
               +VV+ N +I+G  K   V+ A+ L  ++    L P  +T++ LI+ + K G +++A
Sbjct: 532 NHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEA 591

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M+  G +P V  ++ L+ G   +G  E + ++++++ +  +       + ++  
Sbjct: 592 MGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILAC 651

Query: 444 LC 445
           LC
Sbjct: 652 LC 653



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 4/186 (2%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+    + LI+   K +  +    ++  +    + P   + + L +++        AF++
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN--GMRAGLVTYNILVGAL 444
            + M  RG   +V   N ++ G  R G  +   ++ +++  N   +    VTYN LV   
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK  +  +A  L + M K    +  PN+VTY+VLI  +C+ G++ +  GLL E+  +GL 
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCR--PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLK 217

Query: 505 PNQTTY 510
            +   Y
Sbjct: 218 ADVFVY 223



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           PS    +TLID   K  + +   ++ + M+   VLP  ++ + L        +     ++
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++ +   G    +   N+++   C+ G+  KA+SL  +M K   +   P+ VTYN L+ G
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNG 158

Query: 482 FCQKGKLEDANGLLNELLEKG--LIPNQTTYQIV 513
           FC+  +L +A  +L E ++KG    PN  TY ++
Sbjct: 159 FCKAKRLAEAR-VLFEAMKKGGDCRPNLVTYSVL 191


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 217/392 (55%), Gaps = 9/392 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF+    +G+   V  CN++LR L    +++D+  V+ EM +  IE ++ ++N +L
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVS--PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +   K G+ +K   ++++M++ G S  P  VTYN++I G  +KG + +  +     +   
Sbjct: 239 DSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK 298

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +     +  T+N LI G      +     +  EM + GI   VVTYN++I+GL   G+++
Sbjct: 299 KA----SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIE 354

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A A   EM A GL P+V+T N+L+NG+CK    ++A +LF D+   GL+P+V+TYN LI
Sbjct: 355 AAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILI 414

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D YC+ G +E+A  ++  M+++G LPDV TY  L+ G     ++   R   +E+++ G+R
Sbjct: 415 DGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLR 474

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                YN  + A    G   K+   L E+  +E      + VTYN+LI G C+ G L+DA
Sbjct: 475 PDCFAYNTRICAEITLGDISKSFQ-LREVIMLEGISS--DTVTYNILIDGLCKTGNLKDA 531

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             L+ +++  GL P+  TY  +     E+GF+
Sbjct: 532 EELMMQMISNGLQPDCITYTCLIHAHCERGFL 563



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 197/377 (52%), Gaps = 11/377 (2%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS  + S   N +I  +L   +VK +   L  E      + G+  +V++ N ++  L++ 
Sbjct: 296 LSKKASSFTYNPLITGLLARGFVKKVD-DLQLEM----ENEGIMPTVVTYNAMIHGLLQS 350

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ E  +  + EM+   +  ++ ++N +LNG CKAG   +A  +  D++  G++P V+TY
Sbjct: 351 GQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTY 410

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           NILIDGYC+   +G + +A  + ++MVE G LP+  T+  L+ G     +++   + F+E
Sbjct: 411 NILIDGYCR---LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDE 467

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S G+      YN+ I      G + ++  LR+ +M  G+  + VT N LI+G CK   
Sbjct: 468 MLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGN 527

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++ A  L   +   GL P  ITY  LI A+C+ G + +A    N M+  G+ P   TY  
Sbjct: 528 LKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTV 587

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I    R GN+        +++  G+    +TYN+L+ ALC+ G+++ A       ++M 
Sbjct: 588 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYR---HFYEML 644

Query: 465 KEKKWPNIVTYNVLIKG 481
           +    PN  TY +LI G
Sbjct: 645 ERGLVPNKYTYTLLIDG 661



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 184/364 (50%), Gaps = 11/364 (3%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
            ++EM    +  ++   N VL  L  A + +  S +  +M  LG+ P +VTYN L+D + 
Sbjct: 183 AFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFS 242

Query: 233 KKGGIGKMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           K+G   +  K D + K+M   G   LPN+VT+N +I G  +   +  A ++ EEM     
Sbjct: 243 KEG---RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKK 299

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A+   TYN LI GL   G + +   L+ EM   G+ P VVT NA+I+G  +   +E A+ 
Sbjct: 300 ASSF-TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            F ++   GL P VITYN+L++ YCK G  ++A  +   +   G+ P V TYN LI G  
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC 418

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKW 469
           R G++E  R +  E+V  G    + TY IL+    K   +  ++++  E F +M  +   
Sbjct: 419 RLGDLEEARRLKEEMVEQGCLPDVYTYTILM----KGSHNVCSLAMTREFFDEMLSKGLR 474

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           P+   YN  I      G +  +  L   ++ +G+  +  TY I+ + + + G + D E  
Sbjct: 475 PDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEEL 534

Query: 530 MYNI 533
           M  +
Sbjct: 535 MMQM 538



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 55/299 (18%)

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +  F EM SHG+A  V   N ++  L    + D+  A+  EM+  G++P++VT N L++ 
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 339 FCKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYCKEG---------------RME 381
           F K+   +K  +L  ++  +G S  P+ +TYN +I    ++G               +  
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA 300

Query: 382 DAFA-------------------MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            +F                    ++  M + G++P V TYN +I GL + G +E  +   
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+   G+   ++TYN L+   CK G  K+A+ L  +   + +    P ++TYN+LI G+
Sbjct: 361 VEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGD---LRRAGLAPTVLTYNILIDGY 417

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------RE---EMMEKGFIPD 525
           C+ G LE+A  L  E++E+G +P+  TY I+             RE   EM+ KG  PD
Sbjct: 418 CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 179/309 (57%), Gaps = 3/309 (0%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+   ++  L K  + +D     +EM  R I+ +   +NFVL+GLC+  K+ +A  + E 
Sbjct: 10  LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    ++P VVTYN LI+G CK   I   Y+   +FK+M   G +P EV++NTLIDGFCK
Sbjct: 70  MVKQRINPNVVTYNTLINGLCKAWRIETAYE---LFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            +++ AA  VF++M        VVTY +LI+GL   GK+  A  + D M+  G+ PNV T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LI+GFCK + V++A  L + +  QG++P+V+TYN L+++ C+  ++EDAF +   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R   P V TYN L+  L     ++G   +  E++  G     +TY+ L   L + GK  
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 452 KAVSLLDEM 460
           +A  L+++M
Sbjct: 307 EAQELMEKM 315



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 171/312 (54%), Gaps = 6/312 (1%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P  +TY  +++  CK   I     A A  ++M   GI P+   +N ++ G C++E +  A
Sbjct: 7   PDALTYGPIVERLCKTKRIDD---ALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 63

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
             +FE+M    I   VVTYN+LINGLC   +++ A  L  EM   G  P  V+ N LI+G
Sbjct: 64  RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 123

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           FCKKK +  A+ +FD +      P+V+TY TLID   K G+++ A  + + M+ +GV P+
Sbjct: 124 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 183

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V+TY+CLI G  +   V+    ++ ++V  G+   +VTYNIL+ +LC+  K + A  L  
Sbjct: 184 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 243

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
               M + +  P +VTYN L++  C   +L+ A+ L  E++ KG  P+  TY  +   + 
Sbjct: 244 ---GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 519 EKGFIPDIEGHM 530
             G + + +  M
Sbjct: 301 RAGKVHEAQELM 312



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 162/280 (57%), Gaps = 3/280 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K      N +L  L +E K E+   ++++M ++RI  N+ ++N ++NGLCKA ++  A
Sbjct: 39  GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 98

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M   G  P  V+YN LIDG+CKK     +  A  VF  MV +  +PN VT+ TL
Sbjct: 99  YELFKEMAGKGYVPTEVSYNTLIDGFCKK---KDLVAAKDVFDKMVRSNCVPNVVTYTTL 155

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  K   + AA +V + M   G+   V TY+ LI+G C   ++DEA  L ++M+  G+
Sbjct: 156 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 215

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P VVT N L+N  C+   +E A  LF  ++++   P+V+TYNTL+ A C   +++ A  
Sbjct: 216 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 275

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +   M+ +G  PD  TY+ L  GL+R G V   + +M ++
Sbjct: 276 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 169/311 (54%), Gaps = 6/311 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++  LCK  +++ A   +E+M + G+ P    YN ++ G C++    K+ +A  +F
Sbjct: 11  TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEE---KVEEARLLF 67

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + MV+  I PN VT+NTLI+G CK   I  A ++F+EM   G     V+YN+LI+G C  
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
             L  A  + D+M+ S   PNVVT   LI+G  K   V+ A  + D + ++G++P+V TY
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + LID +CK  R+++A  +   M+ +G+ P V TYN L+  L R   +E    +   +  
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VTYN L+ ALC   +   A  L  EM     +   P+ +TY+ L  G  + GK
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA---KGCPPDAITYDTLAWGLTRAGK 304

Query: 488 LEDANGLLNEL 498
           + +A  L+ ++
Sbjct: 305 VHEAQELMEKM 315



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 129/252 (51%), Gaps = 3/252 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++     +  +V++ N L+  L K  + E    ++KEM  +       S+N +++G CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
              L  A D+ + M      P VVTY  LIDG  K    GK+  A  V   MV+ G+ PN
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKS---GKVQAAAEVLDGMVKKGVTPN 183

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T++ LIDGFCK   +  A K+ E+M + GIA  VVTYN L+N LC   KL++A  L  
Sbjct: 184 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 243

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M      P VVT N L+   C  K ++ A  L+ ++  +G  P  ITY+TL     + G
Sbjct: 244 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 303

Query: 379 RMEDAFAMRNSM 390
           ++ +A  +   M
Sbjct: 304 KVHEAQELMEKM 315



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 3/248 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+    K  +    +E FK     G   + +S N L+    K+      + V+
Sbjct: 78  NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M R     N+ ++  +++GL K+GK+  A+++++ M   GV+P V TY+ LIDG+CK 
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK- 196

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + ++ +A  + + MV  GI P  VT+N L++  C+ + +  A K+F  M        V
Sbjct: 197 --VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 254

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+L+  LC   +LD A  L  EM+A G  P+ +T + L  G  +   V +A+ L + 
Sbjct: 255 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 314

Query: 355 ISEQGLSP 362
           +     +P
Sbjct: 315 MKLTKRNP 322



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           MA    P+ +T   ++   CK K ++ A    ++++ +G+ P    YN ++   C+E ++
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A  +   M+ + + P+V TYN LI GL +   +E    +  E+   G     V+YN L
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +   C   K K  V+  D   KM +    PN+VTY  LI G  + GK++ A  +L+ +++
Sbjct: 121 IDGFC---KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK 177

Query: 501 KGLIPNQTTYQI-------VR---------EEMMEKGFIPDIEGHMYNI 533
           KG+ PN  TY         VR         E+M+ +G  P +    YNI
Sbjct: 178 KGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV--TYNI 224


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 252/523 (48%), Gaps = 28/523 (5%)

Query: 32  VILQLFNSDADPVL----ILRYFCWSTKELRASHSLLLTGRLLHS---------LVVAKK 78
           V+  L  SD+ P      +   F  S+  L+   S LL   LL+          L  A +
Sbjct: 450 VLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALR 509

Query: 79  ----YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
               +P   S    L   VK  +F     +F  L+        +  +    + A VK   
Sbjct: 510 NEGIFPSSDSLTLLLDHLVKTKQFRVTINVF--LNILESDFRPSKFMYGKAIQAAVKLSD 567

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
              G E F R     +  +V   N L+  L K  + +D E ++ EM  RR+  +L ++N 
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNT 627

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++G CK G   K+  + E MK+  + P ++T+N L+ G  K G +     A+ V  +M 
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVED---AENVLTEMK 684

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G +P+  TF+ L DG+  ++   AA+ V+E     G+     T + L+N LC +G+++
Sbjct: 685 DQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  +    MA GL PN V  N +I+G+ +K  +  AR+  D + +QG+ P  + YN LI
Sbjct: 745 KAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLI 804

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             +C+ G ME+A    N M  +GV P V TYN LI G  R+   +   +++ E+ +NG  
Sbjct: 805 RTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTM 864

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +V+Y  L+  LCK  K  +A  +  +   ME     PN+  YN+LI G C KGK+EDA
Sbjct: 865 PNVVSYGTLINCLCKGSKLLEAQIVKRD---MEDRGVSPNVRIYNMLIDGCCSKGKIEDA 921

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
                E+ +KG+  N  TY  + + +   G + + E  +  IS
Sbjct: 922 FRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEIS 964



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 200/397 (50%), Gaps = 6/397 (1%)

Query: 117  IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
            I  + L+  Y K+  P   F+  +R     ++ S+++ N LL+ L K G  ED E V  E
Sbjct: 623  ITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTE 682

Query: 177  MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
            MK +    +  +F+ + +G     K + A  + E     G+     T +IL++  CK+G 
Sbjct: 683  MKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQ 742

Query: 237  IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            I K   A+ +    +  G++PNEV +NT+IDG+ +  ++  A    + M   G+    + 
Sbjct: 743  IEK---AEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799

Query: 297  YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            YN LI   C  G ++ A    ++M   G+ P+V T N LI G+ +K   +K   L  ++ 
Sbjct: 800  YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 357  EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            + G  P+V++Y TLI+  CK  ++ +A  ++  M DRGV P+V  YN LI G   +G +E
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 417  GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                   E+   G+   LVTYN L+  L  +GK  +A  +L    ++ ++   P++ TYN
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDML---LEISRKGLKPDVFTYN 976

Query: 477  VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             LI G+   G ++    L  E+   G+ P   TY ++
Sbjct: 977  SLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLL 1013



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 218/466 (46%), Gaps = 67/466 (14%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            ++    +L   Y  N K       ++ A D GLK +  +C+ LL AL KEG+ E  E + 
Sbjct: 691  DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750

Query: 175  -----------------------------------KEMKRRRIELNLDSFNFVLNGLCKA 199
                                                 M+++ ++ +  ++N ++   C+ 
Sbjct: 751  GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810

Query: 200  GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGIL 256
            G +  A   +  MK  GVSP V TYNILI GY      G+ Y+ D  F   K+M +NG +
Sbjct: 811  GDMENAEQEVNKMKLKGVSPSVETYNILIGGY------GRKYEFDKCFDLLKEMEDNGTM 864

Query: 257  PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            PN V++ TLI+  CK   +  A  V  +M   G++  V  YN LI+G C  GK+++A   
Sbjct: 865  PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRF 924

Query: 317  RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +EM   G++ N+VT N LI+G      + +A  +  +IS +GL P V TYN+LI  Y  
Sbjct: 925  SEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRF 984

Query: 377  EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             G ++   A+   M   G+ P + TY+ LI+  ++EG +E  + I  E+    ++  L+ 
Sbjct: 985  AGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEM---SLQPDLLV 1040

Query: 437  YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
            YN ++      G   KA +L  +M  +EK     +  TYN LI G  + GKL +   L++
Sbjct: 1041 YNGVLHCYAVHGDMDKAFNLQKQM--IEKSIGL-DKTTYNSLILGQLKVGKLCEVRSLID 1097

Query: 497  ELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            E+  + + P   TY I+                  EM EKG + D+
Sbjct: 1098 EMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDV 1143



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 166/318 (52%), Gaps = 10/318 (3%)

Query: 144  DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            D G+  +V   N L+     +GK ED     +EM ++ IELNL ++N +++GL   GKL 
Sbjct: 895  DRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLA 954

Query: 204  KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            +A D++ ++   G+ P V TYN LI GY   G + +     A++++M  +GI P   T++
Sbjct: 955  EAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCI---ALYEEMKTSGIKPTLKTYH 1011

Query: 264  TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
             LI   C  E I    K+F EM    +   ++ YN +++   V G +D+A  L+ +M+  
Sbjct: 1012 LLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEK 1067

Query: 324  GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             +  +  T N+LI G  K   + + R L D++  + + P   TY+ ++  +C+      A
Sbjct: 1068 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGA 1127

Query: 384  FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            +     M ++G+L DV   + L++GL  E   +   N+++E+  NG + G V  +  + A
Sbjct: 1128 YVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM--NGRKLGDVIVDEDLSA 1185

Query: 444  LCKDGKSKKAVSLLDEMF 461
              +  ++++ V L D+ F
Sbjct: 1186 TERSFENQECV-LQDKYF 1202



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 12/180 (6%)

Query: 135  GFEAFKRA-GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
            G E  K+  G+  L+  +L  N +L      G  +    + K+M  + I L+  ++N ++
Sbjct: 1021 GIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLI 1080

Query: 194  NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK-KGGIGKMYKADAVFKDMVE 252
             G  K GKL +   ++++MK+  + P+  TY+I++ G+C+ K  +G    A   +++M E
Sbjct: 1081 LGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG----AYVWYREMQE 1136

Query: 253  NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV------TYNSLINGLCV 306
             G+L +    + L+ G  ++     A  V  EM    +   +V      T  S  N  CV
Sbjct: 1137 KGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIVDEDLSATERSFENQECV 1196


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 204/378 (53%), Gaps = 6/378 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            E   R  +      V++   L+ A   E        +  EM  R  + ++ ++N ++NG
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           +CK G+L++A   +  M S G  P V+T+NI++   C  G   +   A+ +  +MV  G 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTG---RWMDAEKLLTEMVRKGC 117

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VTFN LI+  C+   +  A+ + E+M +HG     ++YN L++G C + K+D A+ 
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ 177

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             + M++ G  P++VT N ++   CK   V+ A  L + +S +G SP +ITYNT+ID   
Sbjct: 178 YLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 237

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G+ + A  + + M  +G+ PDV TY+ LIAGLSREG VE      +++   G++    
Sbjct: 238 KVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAF 297

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN ++  LCK  ++ +A+  L  M     +   P  V+Y +LI+G   +G  ++A  LL
Sbjct: 298 TYNSIMFGLCKAQQTDRAIDFLAYMI---SKGCKPTEVSYTILIEGIANEGLAKEALELL 354

Query: 496 NELLEKGLIPNQTTYQIV 513
           NEL  +G++   +  Q+V
Sbjct: 355 NELCSRGVVKKSSAEQVV 372



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 183/335 (54%), Gaps = 6/335 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++   C    + +A  ++++M S G  P VVTYN+L++G CK+G   ++ +A    
Sbjct: 18  TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG---RLDEAIKFL 74

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M   G  PN +T N ++   C       A K+  EM   G +  VVT+N LIN LC  
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G L  A+ + ++M   G  PN ++ N L++GFCK+K +++A    + +  +G  P ++TY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT++ A CK+G+++ A  + N +  +G  P + TYN +I GLS+ G  +    +++E+  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  ++TY+ L+  L ++GK ++A+    ++   E     PN  TYN ++ G C+  +
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV---EGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            + A   L  ++ KG  P + +Y I+ E +  +G 
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 159/290 (54%), Gaps = 10/290 (3%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V    +E    P+ +T+  LI+  C +  +  AMK+ +EMGS G    VVTYN L+NG+C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G+LDEA+   + M + G +PNV+T N ++   C       A  L  ++  +G SPSV+
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+N LI+  C++G +  A  +   M   G  P+  +YN L+ G  +E  ++     +  +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V+ G    +VTYN ++ ALCKDGK   AV LL+++     +   P ++TYN +I G  + 
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL---SSKGCSPVLITYNTVIDGLSKV 239

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG--FIPDIEG 528
           GK + A  LL+E+  KGL P+  TY      + RE  +E+   F  D+EG
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEG 289



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 15/284 (5%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTI 101
           +ILR  C + + + A        +LL  +V     P + +F   ++   + G       I
Sbjct: 91  IILRSMCSTGRWMDAE-------KLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDI 143

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
              + T       NS+  + L+  + K  K     +  +     G    +++ N +L AL
Sbjct: 144 LEKMPT--HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTAL 201

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K+GK +    +  ++  +     L ++N V++GL K GK ++A +++ +M+  G+ P V
Sbjct: 202 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           +TY+ LI G  ++   GK+ +A   F D+   G+ PN  T+N+++ G CK +    A+  
Sbjct: 262 ITYSSLIAGLSRE---GKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDF 318

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
              M S G     V+Y  LI G+  +G   EA+ L +E+ + G+
Sbjct: 319 LAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 254/535 (47%), Gaps = 70/535 (13%)

Query: 26  NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRS- 84
           N +P+ V   L  +  D  L LR+F +        HS      L+HSL+    +    S 
Sbjct: 66  NIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSL 125

Query: 85  --------------FLHMF--VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
                         F + F   K  KF+S S                    DML+  YV+
Sbjct: 126 LQTLLLRGLNPHQIFENFFESYKKYKFSSSSG------------------FDMLIQHYVQ 167

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           N +   G        DYGL   V + + LL AL +  KF  V  ++  +    ++ +   
Sbjct: 168 NKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYI 227

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK----------KGGIG 238
           +  V+  LC+    NKA +I+   +  G S  +VTYN+ I+G CK          K  +G
Sbjct: 228 YTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLG 287

Query: 239 -KMYKADAV---------------------FKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            K  KAD V                       +M+E G +P+E   + LI+G  K  +I 
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++  ++G  G+   +  YNS+IN LC  GKL+EA  L   M   GL PN VT   LI
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GF ++  ++ A   F+ + E G+S +V +YN++I+  CK G+M+ A  +   M+D+G+ 
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK 467

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V+TY  LI+G  ++G V     + +E+   G+    VT+  L+  LC+  K  +A  L
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            DEM ++   K  PN VTYNVLI+G C++G    A  LL+E+++KGL P+  TY+
Sbjct: 528 FDEMVEL---KILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYR 579



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 234/472 (49%), Gaps = 43/472 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++   K GK      +F  ++     L  N +   +L+  + +  K  + F  F +  
Sbjct: 370 SMINSLCKTGKLEEAELLFSVMA--ERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+ ++V S N ++    K GK +  E ++KEM  + ++  + ++  +++G CK G + 
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +  +M   G++P  VT+  LI G C+   I KM +A  +F +MVE  ILPNEVT+N
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQ---INKMAEASKLFDEMVELKILPNEVTYN 544

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+G C++ N + A ++ +EM   G++    TY  LI GLC  G++ EA    +++   
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604

Query: 324 GLKPNVVTSNALINGFCKKKLVEKA-------------------------------RVLF 352
             + + +   AL+ GFCK+  +++A                               R+LF
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILF 664

Query: 353 DDISE---QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + + E   +G+ P  + Y  LID + K G ++ AF     M+  G +P+  TY  L+ GL
Sbjct: 665 ELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGL 724

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G V   + +   ++        +TY   +  L K+G  + A+ L + M     +  +
Sbjct: 725 FKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML----QGSF 780

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            N VTYN+LI+G+CQ GK ++A  LL+ ++  G++P+  TY     E  ++G
Sbjct: 781 ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRG 832



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 203/390 (52%), Gaps = 9/390 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            FE   + G  G+  ++   N ++ +L K GK E+ E ++  M  R +  N  ++  +++
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  +  KL+ A      M   G+S  V +YN +I+  CK    GKM  A+ +FK+MV+ G
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCK---FGKMKMAELLFKEMVDKG 465

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P   T+ +LI G+CKD  +  A K++ EM   GIA   VT+ +LI GLC   K+ EA 
Sbjct: 466 LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEAS 525

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L DEM+   + PN VT N LI G C++    +A  L D++ ++GLSP   TY  LI   
Sbjct: 526 KLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGL 585

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  GR+ +A    N +  +    D   Y  L+ G  +EG ++       E+V  G++  L
Sbjct: 586 CSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDL 645

Query: 435 VTYNILV-GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           V+Y +L+ GAL ++ +      L + + +M  +   P+ V Y +LI GF + G L+ A  
Sbjct: 646 VSYAVLISGALNQNDR-----ILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFE 700

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
               ++ +G +PN  TY  +   + + G++
Sbjct: 701 FWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 229/437 (52%), Gaps = 33/437 (7%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS S+   ++ I+ L     K+ +     E  +  G+ GLK+ +++   L+  L +  +F
Sbjct: 256 CSLSIVTYNVFINGL----CKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311

Query: 168 EDVEYVYKEMKRRRIELNL----DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           E    V  EM    IEL       + + ++ GL K G +  A +++  +  LGV P +  
Sbjct: 312 E----VGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN +I+  CK G   K+ +A+ +F  M E G+ PN+VT+  LIDGF +   +  A   F 
Sbjct: 368 YNSMINSLCKTG---KLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           +M   GI+A V +YNS+IN  C  GK+  A  L  EM+  GLKP V T  +LI+G+CK  
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           LV KA  L+ +++ +G++P+ +T+  LI   C+  +M +A  + + M++  +LP+  TYN
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  REGN      +++E++  G+     TY  L+  LC  G+  +A   ++++   
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLH-- 602

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------- 512
            K ++   +  Y  L++GFC++G++++A     E++ +GL  +  +Y +           
Sbjct: 603 HKHQRLDEL-CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDR 661

Query: 513 ----VREEMMEKGFIPD 525
               +  EM  KG  PD
Sbjct: 662 ILFELLREMHGKGMQPD 678



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 178/378 (47%), Gaps = 16/378 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  ++L+  + +       FE        GL     +   L+  L   G+  + +   
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++  +   L+   +  +L G CK G++ +A    ++M   G+   +V+Y +LI G    
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG---- 654

Query: 235 GGIGKMYKADAVF----KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                + + D +     ++M   G+ P+ V +  LIDGF K  N+  A + +  M   G 
Sbjct: 655 ----ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               VTY +L+NGL   G ++EA  L   M+     PN +T    ++   K+  +E A  
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +  QG   + +TYN LI  YC+ G+ ++A  + + M+  G++PD  TY+  I    
Sbjct: 771 LHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + GNV+   ++   ++  G++   V +N L+ A C +G+  +A+ L ++M  M +  K P
Sbjct: 830 KRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDM--MLRGLK-P 886

Query: 471 NIVTYNVLIKGFCQKGKL 488
              TY+ L+    Q+ +L
Sbjct: 887 TQSTYHSLMVQLAQRARL 904



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 42/299 (14%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS----DIMEDM 212
           LL+   KEG+ ++     +EM  R ++++L S+  ++     +G LN+      +++ +M
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILFELLREM 670

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------------------------ 242
              G+ P  V Y ILIDG+ K G + K ++                              
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730

Query: 243 --ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A  +FK M+    +PN +T+   +D   K+ N+  A+++   M   G  A  VTYN L
Sbjct: 731 NEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNIL 789

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I G C  GK  EA  L D M+  G+ P+ +T +  I  +CK+  V+ A  +++ + ++GL
Sbjct: 790 IRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGL 849

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            P  + +N LI A C  G ++ A  +RN M+ RG+ P  STY+ L+  L++   +  V+
Sbjct: 850 KPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+  G+ P+V T + L++   +   I K  +   +F  +V  G+ P+   +  ++   C+
Sbjct: 181 MRDYGLLPEVRTLSALLNALAR---IRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCE 237

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            ++ + A ++  +   +G +  +VTYN  INGLC   ++ EAV ++  +   GLK ++VT
Sbjct: 238 LKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVT 297

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              L+ G C+ +  E    + D++ E G  PS    + LI+   K G +E AF + N + 
Sbjct: 298 YCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVG 357

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             GV+P++  YN +I  L + G +E    + + +   G+    VTY IL+    +  K  
Sbjct: 358 KLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLD 417

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A    ++M +         + +YN +I   C+ GK++ A  L  E+++KGL P   TY 
Sbjct: 418 VAFYYFNKMIECGIS---ATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYT 474

Query: 512 IVREEMMEKGFIP 524
            +     + G +P
Sbjct: 475 SLISGYCKDGLVP 487



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           ++ LI     + ++ + V + + M   GL P V T +AL+N   + +   +   LFD + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
             G+ P    Y  ++   C+      A  + N     G    + TYN  I GL +   V 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +   L   G++A LVTY  LV  LC+  + +  + ++DEM ++      P+    +
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIEL---GYVPSEAAVS 334

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            LI+G  + G +E A  LLN++ + G++PN   Y  +   + + G + + E
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAE 385


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +  P+ ++ + + V      S S +F A+ 
Sbjct: 1   FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAIL 60

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 61  ETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 120

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   YKE+       +L  FN +++  CK G +  A  + + +   G+ P VV++N 
Sbjct: 121 FKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNT 180

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 181 LMNGYIRLGDLDEGFRLKSA---MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 238 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 297

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A+ L D++  +GL P  I+Y TLID  CKEG +E AF  R  M+   +  D   Y  LI
Sbjct: 298 QAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALI 357

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G+R    TY +++   CK G       LL E   M+++
Sbjct: 358 SGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKE---MQRD 414

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 415 GHVPSVVTYNVLMNG 429



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 166/275 (60%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+ +I  A+ VF+ +   G+   VV++N+L+NG   
Sbjct: 128 YKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIR 187

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ ++GL P+ +T
Sbjct: 188 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 247

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 248 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMR 307

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   ++Y  L+   CK+G  + A    +   +M +E    + V Y  LI G CQ+G
Sbjct: 308 MKGLKPDKISYTTLIDGCCKEGDLETA---FEHRKRMIQENIRLDDVAYTALISGLCQEG 364

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 365 RSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKG 399



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 100/255 (39%), Gaps = 65/255 (25%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 19  SYCTMIHFLCTHQMLPEA-------------------KNLIQVVVSRKGKNSASAVFAAI 59

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E QG   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 60  LETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 119

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CK+G  + A+S+ D +       KW   P
Sbjct: 120 YFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAI------TKWGLRP 173

Query: 471 NIVTYNV-----------------------------------LIKGFCQKGKLEDANGLL 495
           ++V++N                                    LI G C++ K++DAN L 
Sbjct: 174 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 233

Query: 496 NELLEKGLIPNQTTY 510
           +E+L+KGL+PN  T+
Sbjct: 234 DEMLDKGLVPNGVTF 248


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 207/393 (52%), Gaps = 6/393 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   R  + G K  +++ N L+  L   GK  +   +  +M     + N  ++  VLN
Sbjct: 275 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 334

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK+G+   A +++  M+   +    V Y+I+IDG CK G +   +    +F +M   G
Sbjct: 335 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN---LFNEMEMKG 391

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I  N +T+N LI GFC         K+  +M    I   VVT++ LI+    +GKL EA 
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P+ +T  +LI+GFCK+  ++KA  + D +  +G  P++ T+N LI+ Y
Sbjct: 452 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 511

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  R++D   +   M  RGV+ D  TYN LI G    G +   + +  E+V+  +   +
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY IL+  LC +G+S+KA+ + +   K+EK K   +I  YN++I G C   K++DA  L
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 628

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
              L  KG+ P   TY I+   + +KG + + E
Sbjct: 629 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 210/405 (51%), Gaps = 41/405 (10%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +YG + + ++   +L  + K G+      + ++M+ R I+L+   ++ +++GLCK G L+
Sbjct: 319 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 378

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++  +M+  G++  ++TYNILI G+C  G   +      + +DM++  I PN VTF+
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAG---RWDDGAKLLRDMIKRKINPNVVTFS 435

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID F K+  +  A ++ +EM   GIA   +TY SLI+G C +  LD+A  + D M++ 
Sbjct: 436 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 495

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+ T N LING+CK   ++    LF  +S +G+    +TYNTLI  +C+ G++  A
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------------GVRNIMNEL 425
             +   M+ R V P++ TY  L+ GL   G  E                  G+ NI+   
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615

Query: 426 VNN-----------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           + N                 G++ G+ TYNI++G LCK G   +A  L     KME++  
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR---KMEEDGH 672

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            P+  TYN+LI+     G    +  L+ EL   G   + +T ++V
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 41/407 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V+  ++L  A+ K  +++ V  + K+M+ + I  NL + + ++N  C+  KL  A   M
Sbjct: 185 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 244

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P  +T++ LI+G C +G   ++ +A  +   MVE G  P+ +T NTL++G 
Sbjct: 245 GKIIKLGYEPNTITFSTLINGLCLEG---RVSEALELVDRMVEMGHKPDLITINTLVNGL 301

Query: 270 -----------------------------------CKDENISAAMKVFEEMGSHGIAAGV 294
                                              CK    + AM++  +M    I    
Sbjct: 302 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 361

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y+ +I+GLC  G LD A  L +EM   G+  N++T N LI GFC     +    L  D
Sbjct: 362 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 421

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + ++ ++P+V+T++ LID++ KEG++ +A  +   M+ RG+ PD  TY  LI G  +E +
Sbjct: 422 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +++ +V+ G    + T+NIL+   CK  +    + L     KM       + VT
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVT 538

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           YN LI+GFC+ GKL  A  L  E++ + + PN  TY+I+ + + + G
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
           K + A D+  DM      P V+ ++ L         I K  + D V    K M   GI  
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLF------SAIAKTKQYDLVLALCKQMELKGIAH 219

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T + +I+ FC+   +  A     ++   G     +T+++LINGLC++G++ EA+ L 
Sbjct: 220 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 279

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D M+  G KP+++T N L+NG C      +A +L D + E G  P+ +TY  +++  CK 
Sbjct: 280 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 339

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+   A  +   M +R +  D   Y+ +I GL + G+++   N+ NE+   G+   ++TY
Sbjct: 340 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 399

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NIL+G  C  G+      LL +M    K K  PN+VT++VLI  F ++GKL +A  L  E
Sbjct: 400 NILIGGFCNAGRWDDGAKLLRDMI---KRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456

Query: 498 LLEKGLIPNQTTY 510
           ++ +G+ P+  TY
Sbjct: 457 MIHRGIAPDTITY 469



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 184/350 (52%), Gaps = 13/350 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ + VKEGK  + E ++KEM  R I  +  ++  +++G CK   L+KA+
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M S G  P + T+NILI+GYCK   I    +   +F+ M   G++ + VT+NTLI
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE---LFRKMSLRGVVADTVTYNTLI 543

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   ++ A ++F+EM S  +   +VTY  L++GLC +G+ ++A+ + +++  S ++
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 603

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++   N +I+G C    V+ A  LF  +  +G+ P V TYN +I   CK+G + +A  +
Sbjct: 604 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 663

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  PD  TYN LI     +G+      ++ EL   G      T  +++  L  
Sbjct: 664 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 723

Query: 447 DGKS--------KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF--CQKG 486
           D  +         K+ S  ++  K      W  ++    L + F  C+ G
Sbjct: 724 DKANYFSKYHNCSKSTSFWNQPEKPSDSWNWKCLLRLRCLAENFVRCKIG 773



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 40/291 (13%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKV-FEEMGSHGIAAGV-VTYNSLINGLCVDGKLDEAV 314
           PNE       D + K+ ++ +  K+ +E+  +  +A    ++Y   +    VD K D+A+
Sbjct: 118 PNE------FDEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLVDIKADDAI 171

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +M+ S   P V+  + L +   K K  +    L   +  +G++ ++ T + +I+ +
Sbjct: 172 DLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 231

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C+  ++  AF+    ++  G  P+  T++ LI GL  EG V     +++ +V  G +  L
Sbjct: 232 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 291

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF--------------------------------K 462
           +T N LV  LC  GK  +A+ L+D+M                                 K
Sbjct: 292 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 351

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ME+     + V Y+++I G C+ G L++A  L NE+  KG+  N  TY I+
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 239/462 (51%), Gaps = 39/462 (8%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +  F KNG+       +  + +    L  +   +  ++  ++K  K     + F  + +
Sbjct: 379 LIERFSKNGEMEKALEFYKKMESLG--LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 436

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL ++V  CN +L  L K+GK +    + ++M+ R I  N+ S+N V+   C+   ++ 
Sbjct: 437 TGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDL 495

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG---------------------------- 236
           A  +  +M   G+ P   TY+ILIDG  K                               
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIIN 555

Query: 237 ----IGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
               +G+  KA  +  +M+E      + +++N++IDGF K+  +  A+  +EEM ++GI+
Sbjct: 556 GLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGIS 615

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY SL++GLC + ++D+A+ +RDEM   G+K ++    ALI+GFCKK  +E A  L
Sbjct: 616 PNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASAL 675

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F ++ E+GL+PS   YN+LI  +   G M  A  +   ML  G+  D+ TY  LI GL +
Sbjct: 676 FSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 735

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           EGN+    ++  E+   G+    + Y ++V  L K G+  K V + +E   M+K    PN
Sbjct: 736 EGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEE---MKKNNVTPN 792

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++ YN +I G  ++G L++A  L +E+L+KG++P+  T+ I+
Sbjct: 793 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 834



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 218/463 (47%), Gaps = 79/463 (17%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKS-------SVLSC---------NQLLR---- 159
            +LM A ++  KP    E F RA + G +        +V +C         N LLR    
Sbjct: 236 QLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKE 295

Query: 160 ----------------ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
                           A VK+G  ED      EM    I +N+ +   ++ G CK   L 
Sbjct: 296 KKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLG 355

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A D+   M++ G SP  VT+++LI+ + K G   +M KA   +K M   G+ P+    +
Sbjct: 356 SALDLFYKMENEGPSPNSVTFSVLIERFSKNG---EMEKALEFYKKMESLGLTPSVFHVH 412

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I G+ K +    A+K+F+E    G+A  V   N++++ LC  GK+D+A  L  +M + 
Sbjct: 413 TIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESR 471

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID----------- 372
           G+ PNVV+ N ++   C+KK ++ AR +F ++ E+GL P+  TY+ LID           
Sbjct: 472 GIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNV 531

Query: 373 ------------------------AYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIA 407
                                     CK G+   A  +  +M+ ++       +YN +I 
Sbjct: 532 LEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIID 591

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  +EG ++       E+  NG+   ++TY  L+  LCK+ +  +A+ + DE   M+ + 
Sbjct: 592 GFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDE---MKNKG 648

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              +I  Y  LI GFC+K  +E A+ L +ELLE+GL P+Q  Y
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVY 691



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 162/270 (60%), Gaps = 5/270 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S +S N ++   +KEG+ +     Y+EM    I  N+ ++  +++GLCK  ++++A ++ 
Sbjct: 582 SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMR 641

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++MK+ GV   +  Y  LI G+CKK     M  A A+F +++E G+ P++  +N+LI GF
Sbjct: 642 DEMKNKGVKLDIPAYGALIHGFCKKSN---MESASALFSELLEEGLNPSQPVYNSLISGF 698

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
               N+ AA+ ++++M   G+   + TY +LI+GL  +G L  A  L  EM A GL P+ 
Sbjct: 699 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDE 758

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +    ++NG  KK    K   +F+++ +  ++P+V+ YN +I  + +EG +++AF + + 
Sbjct: 759 IMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 818

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           MLD+G+LPD +T++ L++G  + G  + +R
Sbjct: 819 MLDKGILPDGATFDILVSG--KVGKFQPIR 846



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 222/498 (44%), Gaps = 49/498 (9%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK-YP 80
           +K +  D  +VI  L N   +P   LR++ W+     +     +   L+H LV + + Y 
Sbjct: 64  AKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYG 123

Query: 81  KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           +    L  +V     T ++++              S ++D   L          GFE   
Sbjct: 124 RASDLLIRYVSTSNPTPMASVLV------------SNLVDSAKL---------FGFEVNS 162

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF----NFVLNGL 196
           RA +Y           LL A  K+ + +    +  +M    +EL +  F    N  L+ L
Sbjct: 163 RAFNY-----------LLNAYSKDRQTDYAVDIVNQM----LELGVIPFVPYVNRTLSAL 207

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            +   + +A ++   M ++GV     T  +L+    ++    K  +A  VF   +E G  
Sbjct: 208 VQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREE---KPAEALEVFSRAIERGAE 264

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI-AAGVVTYNSLINGLCVDGKLDEAVA 315
           P+ + ++  +   CK  N++ A  +  EM    +      TY S+I      G +++A+ 
Sbjct: 265 PDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR 324

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
            +DEM++ G+  NVV + +LI G CK   +  A  LF  +  +G SP+ +T++ LI+ + 
Sbjct: 325 WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFS 384

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ME A      M   G+ P V   + +I G  +    E    + +E    G+ A + 
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 443

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
             N ++  LCK GK  KA  LL    KME     PN+V+YN ++   C+K  ++ A  + 
Sbjct: 444 ICNTILSWLCKQGKIDKATELLR---KMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVF 500

Query: 496 NELLEKGLIPNQTTYQIV 513
           + +LEKGL PN  TY I+
Sbjct: 501 SNMLEKGLKPNNYTYSIL 518



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 45/411 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    K GK    + +   +   S  +  N +  + +MLA+ +     L    F    
Sbjct: 447 TILSWLCKQGKIDKATELLRKME--SRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML 504

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GLK +  + + L+    K    ++V  V  +M    IE+N   +  ++NGLCK G+ +
Sbjct: 505 EKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTS 564

Query: 204 KASDIMEDM---KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           KA +++ +M   K   VS   ++YN +IDG+ K+G   +M  A A +++M  NGI PN +
Sbjct: 565 KARELLANMIEEKRFCVS--CMSYNSIIDGFIKEG---EMDYAVAAYEEMCANGISPNVI 619

Query: 261 TFNTLIDG-----------------------------------FCKDENISAAMKVFEEM 285
           T+ +L+DG                                   FCK  N+ +A  +F E+
Sbjct: 620 TYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSEL 679

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+      YNSLI+G    G +  A+ L  +M+  GL+ ++ T   LI+G  K+  +
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNL 739

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  L+ ++   GL P  I Y  +++   K+G+      M   M    V P+V  YN +
Sbjct: 740 ILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 799

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           IAG  REGN++    + +E+++ G+     T++ILV       +  +A SL
Sbjct: 800 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 213/378 (56%), Gaps = 6/378 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+      ++G   +V+    L+    K G+ E  + ++ EM +  +  N  ++  +++G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K G   +  ++ E M+  GV P + TYN +++ +CK G     +K   +F +M E G+
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK---LFDEMRERGV 299

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N VT+NTLI G C++   + A KV ++M S GI   ++TYN+LI+G C  GKL +A++
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L  ++ + GL P++VT N L++GFCKK     A  +  ++ E+G+ PS ITY  LID + 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFA 419

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +   ME A  +R+ M + G+ PDV TY+ LI G   +G +     +   +V   +    V
Sbjct: 420 RMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKV 479

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN +V   CK+G S +A+ L  E   ME+++  PN+ +Y  +I+  C++ K ++A GL+
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFRE---MEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536

Query: 496 NELLEKGLIPNQTTYQIV 513
            ++++ G+ P+ +   ++
Sbjct: 537 EKMIDTGIDPSDSILNLI 554



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 205/379 (54%), Gaps = 8/379 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V S   +++   + G+ E    +  E++      N+  +  +++G CK G++ KA D+  
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+     TY +LI G   K GI K  +   +++ M E+G+ PN  T+N +++  C
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLF-KNGIKK--QGFEMYEKMQEDGVFPNLYTYNCVMNQHC 279

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           KD     A K+F+EM   G++  +VTYN+LI GLC + K +EA  + D+M + G+ PN++
Sbjct: 280 KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLI 339

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+GFC    + KA  L  D+  +GLSPS++TYN L+  +CK+G    A  +   M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            +RG+ P   TY  LI   +R  N+E    + + +   G+   + TY++L+   C  G+ 
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 451 KKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            +A  L    FK+   KK  PN V YN ++ G+C++G    A  L  E+ EK L PN  +
Sbjct: 460 NEASRL----FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 510 YQIVREEMMEKGFIPDIEG 528
           Y+ + E + ++    + EG
Sbjct: 516 YRYMIEVLCKERKSKEAEG 534



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 183/319 (57%), Gaps = 3/319 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +L+    KN     GFE +++  + G+  ++ + N ++    K+G+ +D  
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAF 288

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ EM+ R +  N+ ++N ++ GLC+  K N+A+ +M+ MKS G++P ++TYN LIDG+
Sbjct: 289 KLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C   G+GK+ KA ++ +D+   G+ P+ VT+N L+ GFCK  + S A KV +EM   GI 
Sbjct: 349 C---GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +TY  LI+       +++A+ LR  M   GL P+V T + LI+GFC K  + +A  L
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  +  + L P+ + YNT++  YCKEG    A  +   M ++ + P+V++Y  +I  L +
Sbjct: 466 FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 412 EGNVEGVRNIMNELVNNGM 430
           E   +    ++ ++++ G+
Sbjct: 526 ERKSKEAEGLVEKMIDTGI 544



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 202/425 (47%), Gaps = 52/425 (12%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ A V+    +     + EM  +      + FN +L  +  +   N+      + K + 
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK-IK 158

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V   V ++ I+I G C+ G I K +    +  ++ E G  PN V + TLIDG CK   I 
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFD---LLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F EMG  G+ A   TY  LI+GL  +G   +   + ++M   G+ PN+ T N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           N  CK    + A  LFD++ E+G+S +++TYNTLI   C+E +  +A  + + M   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TYN LI G    G +    ++  +L + G+   LVTYNILV   CK G +  A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 457 LDEMFK--------------------------------MEKEKKWPNIVTYNVLIKGFCQ 484
           + EM +                                ME+    P++ TY+VLI GFC 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 485 KGKLEDANGLLNELLEKGLIPNQ--------------TTYQIVR--EEMMEKGFIPDIEG 528
           KG++ +A+ L   ++ K L PN+              ++Y+ +R   EM EK   P++  
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 529 HMYNI 533
           + Y I
Sbjct: 516 YRYMI 520



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 164/357 (45%), Gaps = 90/357 (25%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL--------------------- 300
           +  +I+ + + +++ +++  F EM   G   G   +N+L                     
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 301 -------------INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                        I G C  G+++++  L  E+   G  PNVV    LI+G CK+  +EK
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 348 ARVLF-----------------------------------DDISEQGLSPSVITYNTLID 372
           A+ LF                                   + + E G+ P++ TYN +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +CK+GR +DAF + + M +RGV  ++ TYN LI GL RE        +M+++ ++G+  
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L+TYN L+   C  GK  KA+SL  +   ++     P++VTYN+L+ GFC+KG    A 
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRD---LKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 493 GLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
            ++ E+ E+G+ P++ TY I                +R  M E G  PD+  H Y++
Sbjct: 394 KVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV--HTYSV 448


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 204/371 (54%), Gaps = 13/371 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L   L+  G  E+    + +MKR R+     S N +L+   K GK +      +DM  
Sbjct: 29  DALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG 88

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V TYNI+ID  CK+G +     A  +F++M   G++P+ VT+N++IDGF K   
Sbjct: 89  AGAKPTVFTYNIMIDCMCKEGDV---EAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGR 145

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +  FEEM        V+TYN+LIN  C  GKL + +    EM  +GLKPNVV+ + 
Sbjct: 146 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYST 205

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+ ++++A   + D+   GL P+  TY +LIDAYCK G + DAF + N ML  G
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265

Query: 395 VLPDVSTYNCLIAGL-SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           V  +V TY  LI GL   E   EG+ ++++E+V   ++  +VT+ +L+  LCK+    KA
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGL-HLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKA 324

Query: 454 VSLLDEM---FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +     +   F ++      N   Y  +I G C+  ++E A  L  ++ +KGL+P++T Y
Sbjct: 325 IDYFGRISNDFGLQA-----NAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 511 QIVREEMMEKG 521
             + +   ++G
Sbjct: 380 TSLMDGNFKQG 390



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 219/432 (50%), Gaps = 16/432 (3%)

Query: 79  YPKIRS---FLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           +PK RS    LH F K GK   V   F  +  +    ++   +I+ID +     K     
Sbjct: 57  FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCM----CKEGDVE 112

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
                F+     GL    ++ N ++    K G+ +D    ++EMK    E ++ ++N ++
Sbjct: 113 AARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 172

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N  CK GKL K  +   +MK  G+ P VV+Y+ L+D +CK+   G M +A   + DM   
Sbjct: 173 NCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKE---GMMQQAIKFYVDMRRV 229

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G++PNE T+ +LID +CK  N+S A ++  EM   G+   VVTY +LI+GLC      E 
Sbjct: 230 GLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEG 289

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLID 372
           + L DEM+   +K  VVT   LI+G CK KLV KA   F  IS   GL  +   Y  +ID
Sbjct: 290 LHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 349

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK  ++E A  +   M  +G++PD + Y  L+ G  ++GNV     + +++V  GM+ 
Sbjct: 350 GLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKL 409

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            L+ Y  LV  L    + +KA S L+EM     E   P+ V    ++K   + G + +A 
Sbjct: 410 DLLAYTSLVWGLSHCNQLQKARSFLEEMI---GEGIHPDEVLCISVLKKHYELGCINEAV 466

Query: 493 GLLNELLEKGLI 504
            L + L++  L+
Sbjct: 467 ELQSYLMKHQLL 478



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 44/441 (9%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           S++ID+ M+            + F +   + +     SCN LL    K GK + V+  +K
Sbjct: 33  SVLIDLGMVEE--------AIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 84

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M     +  + ++N +++ +CK G +  A  + E+MK  G+ P  VTYN +IDG+ K G
Sbjct: 85  DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVG 144

Query: 236 GI--------------------------------GKMYKADAVFKDMVENGILPNEVTFN 263
            +                                GK+ K    F++M  NG+ PN V+++
Sbjct: 145 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYS 204

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+D FCK+  +  A+K + +M   G+     TY SLI+  C  G L +A  L +EM+  
Sbjct: 205 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQV 264

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++ NVVT  ALI+G C  +   +   L D++ E  +  +V+T+  LID  CK   +  A
Sbjct: 265 GVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKA 324

Query: 384 FAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                 +  D G+  + + Y  +I GL +   VE    +  ++   G+      Y  L+ 
Sbjct: 325 IDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMD 384

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G   +A++L D+M  +E   K  +++ Y  L+ G     +L+ A   L E++ +G
Sbjct: 385 GNFKQGNVLEALALRDKM--VETGMKL-DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 441

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
           + P++     V ++  E G I
Sbjct: 442 IHPDEVLCISVLKKHYELGCI 462



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 136/274 (49%), Gaps = 6/274 (2%)

Query: 240 MYKADAVFKDMV---ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + KAD    D++    N  +P    F+ L         +  A++ F +M    +     +
Sbjct: 3   LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRS 62

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            N L++     GK D       +M+ +G KP V T N +I+  CK+  VE AR LF+++ 
Sbjct: 63  CNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 122

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL P  +TYN++ID + K GR++D       M D    PDV TYN LI    + G + 
Sbjct: 123 FRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 182

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                  E+  NG++  +V+Y+ LV A CK+G  ++A+    +M ++      PN  TY 
Sbjct: 183 KGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV---GLVPNEYTYT 239

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            LI  +C+ G L DA  L NE+L+ G+  N  TY
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTY 273


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 221/434 (50%), Gaps = 38/434 (8%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  +    K       F +    G   ++++ N LL  L  E +  +   ++ +M +
Sbjct: 19  NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK   +G 
Sbjct: 79  P----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK---MGD 131

Query: 240 MYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              A  + + M E + I P+ V ++ +IDG  KD   + A  +F EM   GI   +VTY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +ING C  GK  EA  L  EM+   + P+VVT + LIN   K+  +  A+ L  ++   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAF----AMRNSMLD-------RGVLPDVSTYNCLIA 407
           G+ P+V+T NTL+D  C  G+++DA     AM+ SM+D        GV PDV TYN LI+
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL  EG       +  E+ + G+    VTY+ ++  LCK  +  +A  + D    M  + 
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD---SMGSKS 368

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVR------------ 514
             PNIVT+N LI G+C+ G ++D   L  E+  +G++ N  TY  ++R            
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428

Query: 515 ---EEMMEKGFIPD 525
              +EM+  G  PD
Sbjct: 429 DIFQEMISSGVYPD 442



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 191/325 (58%), Gaps = 14/325 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G+  D + ++ EM+ + I  ++ +++ ++NG C +GK ++A 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++++M    +SP VVT++ LI+   K+G +     A  + ++M+ +G+ PN VT NTL+
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNS---AQDLLQEMISSGVCPNVVTCNTLL 264

Query: 267 DGFCKDENISAAMKVFEEM--------GSH---GIAAGVVTYNSLINGLCVDGKLDEAVA 315
           DG C    +  A+++F+ M         +H   G+   V TYN LI+GL  +GK  EA  
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM   G+ P+ VT +++ING CK+  +++A  +FD +  +  SP+++T+NTLI  YC
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ++D   +   M  RG++ +  TY  LI G  + GN+ G  +I  E++++G+    +
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
           T   ++  L    + K+A+++L+E+
Sbjct: 445 TIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 186/339 (54%), Gaps = 16/339 (4%)

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           +I  ++ SFN ++   C   KL  A      +  LG  P +VT+N L+ G C +    ++
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED---RV 66

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +A  +F  M +    PN VTF TL++G C++  +  A+ + + M   G+    +TY ++
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 301 INGLCVDGKLDEAVALRDEMMA-SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++G+C  G    A+ L  +M   S +KP+VV  +A+I+G  K      A+ LF ++ ++G
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P ++TY+ +I+ +C  G+  +A  +   ML R + PDV T++ LI  L +EG++   +
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--MEKEKKW------PN 471
           +++ E++++G+   +VT N L+  LC  GK K A+ +   M K  M+ +         P+
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + TYN+LI G   +GK  +A  L  E+  +G++P+  TY
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 158/322 (49%), Gaps = 31/322 (9%)

Query: 21  WSKLKNTDPNTVILQLFNSDADPVLI-----LRYFCWSTKELRASHSLLLTGRLLHSLVV 75
           W   ++TD   + +++ +    P ++     +  FC S K   A        RLL  ++V
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ-------RLLQEMLV 215

Query: 76  AKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
            K  P + +F   ++  VK G   S   +   +   S  +C N +  + L+     + K 
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 133 HLGFEAFKRAGDY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
               E FK                G++  V + N L+  L+ EGKF + E +Y+EM  R 
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +  +++ ++NGLCK  +L++A+ + + M S   SP +VT+N LI GYCK G +    
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   +F +M   GI+ N +T+ TLI GF K  NI+ ++ +F+EM S G+    +T  +++
Sbjct: 394 E---LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 302 NGLCVDGKLDEAVALRDEMMAS 323
            GL    +L  A+A+ +E+  S
Sbjct: 451 TGLWSKEELKRALAMLEELQMS 472



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 136/258 (52%), Gaps = 26/258 (10%)

Query: 288 HG--IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
           HG  I   + ++N LI   C   KL  A++   ++   G  P +VT N L++G C +  V
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  LF     Q   P+V+T+ TL++  C+EGR+ +A A+ + M++ G+ P+  TY  +
Sbjct: 67  SEALDLF----HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 406 IAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           + G+ + G+     N++ ++   + ++  +V Y+ ++  L KDG+   A +L  EM   +
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM---Q 179

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------------- 510
            +  +P+IVTY+ +I GFC  GK  +A  LL E+L + + P+  T+              
Sbjct: 180 DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLN 239

Query: 511 --QIVREEMMEKGFIPDI 526
             Q + +EM+  G  P++
Sbjct: 240 SAQDLLQEMISSGVCPNV 257



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 25/208 (12%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++ + N LI  FC    +  A   F  +++ G  P+++T+NTL+   C E R+ +A  + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M      P+V T+  L+ GL REG V     +++ +V +G++   +TY  +V  +CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G +  A++LL +M ++   K  P++V Y+ +I G  + G+  DA  L  E          
Sbjct: 130 GDTVSALNLLRKMEELSHIK--PDVVIYSAIIDGLWKDGRHTDAQNLFIE---------- 177

Query: 508 TTYQIVREEMMEKGFIPDIEGHMYNISG 535
                    M +KG  PDI  +   I+G
Sbjct: 178 ---------MQDKGIFPDIVTYSCMING 196


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 196/388 (50%), Gaps = 36/388 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L++   F+   +++ E+K + + L+  SF  ++ G C+AG   K   ++  ++ 
Sbjct: 128 NNLMCLLIRSNYFDKAWWIFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE 186

Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
            G+SP VV Y  LIDG CK G +                                G   +
Sbjct: 187 FGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQRE 246

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              ++++M  +GI+PN   +N LI  +C    +  A KVF EM   GIA GV+TYN LI 
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   K  EAV L  ++   GL PN+VT N LINGFC    ++ A  LF+ +   GLSP
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +++TYNTLI  Y K   +  A  +   M +R + P   TY  LI   +R    E    + 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMH 426

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +  +G+   + TY++L+  LC  G  K+A  L   + +M  +   PN V YN +I G+
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQ---PNSVIYNTMIHGY 483

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY 510
           C++G    A  LLNE++  G++PN  ++
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASF 511



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 202/381 (53%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GF       ++GL  +V+    L+    K G     + ++ +M R  +  N  +++ ++N
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMN 236

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  K G   +   + E+MK  G+ P    YN LI  YC  G + K +K   VF +M E G
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFK---VFAEMREKG 293

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I    +T+N LI G C+ +    A+K+  ++   G++  +VTYN LING C  GK+D AV
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +++ +SGL P +VT N LI G+ K + +  A  L  ++ E+ ++PS +TY  LIDA+
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            +    E A  M + M   G++PDV TY+ LI GL   GN++    +   L    ++   
Sbjct: 414 ARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V YN ++   CK+G S +A+ LL+EM         PN+ ++   I   C+  K ++A  L
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMV---HSGMVPNVASFCSTIGLLCRDEKWKEAELL 530

Query: 495 LNELLEKGLIPNQTTYQIVRE 515
           L +++  GL P+ + Y++V +
Sbjct: 531 LGQMINSGLKPSVSLYKMVHK 551



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 174/329 (52%), Gaps = 3/329 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +LM  + K      GF+ ++     G+  +  + N L+      G  +   
Sbjct: 224 LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAF 283

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V+ EM+ + I   + ++N ++ GLC+  K  +A  ++  +  +G+SP +VTYNILI+G+
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C    +GKM  A  +F  +  +G+ P  VT+NTLI G+ K EN++ A+ + +EM    IA
Sbjct: 344 CD---VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+        ++A  +   M  SGL P+V T + LI+G C    +++A  L
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL 460

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E  L P+ + YNT+I  YCKEG    A  + N M+  G++P+V+++   I  L R
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +   +    ++ +++N+G++  +  Y ++
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 188/392 (47%), Gaps = 60/392 (15%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           ++FN ++  L ++   +KA  I  ++KS  V     ++ I+I G C+ G   K ++  A+
Sbjct: 125 NTFNNLMCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAM 183

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAA---------------------------- 278
            +   E G+ PN V + TLIDG CK  N+  A                            
Sbjct: 184 LE---EFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFK 240

Query: 279 -------MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
                   +++E M   GI      YN LI+  C  G +D+A  +  EM   G+   V+T
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G C+ K   +A  L   +++ GLSP+++TYN LI+ +C  G+M+ A  + N + 
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G+ P + TYN LIAG S+  N+ G  +++ E+    +    VTY IL+ A  +   ++
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420

Query: 452 KAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ--- 507
           KA     EM   MEK    P++ TY+VLI G C  G +++A+ L   L E  L PN    
Sbjct: 421 KAC----EMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 508 -----------TTYQIVR--EEMMEKGFIPDI 526
                      ++Y+ +R   EM+  G +P++
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNV 508



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 160/340 (47%), Gaps = 23/340 (6%)

Query: 187 DSFNFVLNGLCKAGKLNKA-------------SDIMEDMKSLGVSPKVV---TYNILIDG 230
            S +F+LN L  +G L +A             S +M  +     +P +     Y+ +++ 
Sbjct: 39  HSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNA 98

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           Y       +   A      M+  G +P   TFN L+    +      A  +F E+ S  +
Sbjct: 99  YVHSHSTDQ---ALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK-V 154

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                ++  +I G C  G   +   L   +   GL PNVV    LI+G CK   V  A+ 
Sbjct: 155 VLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKN 214

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF  +   GL P+  TY+ L++ + K+G   + F M  +M   G++P+   YNCLI+   
Sbjct: 215 LFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYC 274

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G V+    +  E+   G+  G++TYNIL+G LC+  K  +AV L+    K+ K    P
Sbjct: 275 NGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH---KVNKVGLSP 331

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           NIVTYN+LI GFC  GK++ A  L N+L   GL P   TY
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 4/156 (2%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y+T+++AY      + A    + M+  G +P  +T+N L+  L R    +    I NEL 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL- 150

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            + +     ++ I++   C+ G   K   LL     +E+    PN+V Y  LI G C+ G
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA---MLEEFGLSPNVVIYTTLIDGCCKYG 207

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            +  A  L  ++   GL+PN  TY ++     ++G 
Sbjct: 208 NVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGL 243


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 259/538 (48%), Gaps = 74/538 (13%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           +L +F WS   L  +    L+   L SL+  +K    +S L  F+   +  +     H L
Sbjct: 70  LLSFFKWSQTHLSVTS---LSHLPLISLLSHQKLSDAKSLLTAFISADR--THLLHHHLL 124

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK-- 163
            +    +    +I+D  + AYV   +PH   + F R     LK ++L+ N L+ ALV+  
Sbjct: 125 HSPFKKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYP 184

Query: 164 --------------------EGKFEDVEYVYKEMKRRRIELNLDSFNFVLN--GLCKAGK 201
                               + K  +   +  +MK      +  S+N +L+   LC++GK
Sbjct: 185 SKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGK 244

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEV 260
            +++ D + ++   G+ P  +TYN +I GYC++G + K ++    F++ MVE    P+  
Sbjct: 245 TDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQ----FRNKMVEKSFKPDLF 300

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL---- 316
           T N L+ G C +  +  A+K+F    S G A   VTYN++I+GLC +G+ +EA  L    
Sbjct: 301 TCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 360

Query: 317 --------------------------------RDEMMASGLKPNVVTSNALINGFCKKKL 344
                                           R++M+    KP++ T N L+ G C + +
Sbjct: 361 EEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 420

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYN 403
           ++ A  LF+    +G +   +TYNT+I   CKEGR E+AF +   M ++ G++PD +TYN
Sbjct: 421 LDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYN 480

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I G  REG VE      N++V    +  L T NIL+  LC++G   KA+ L +     
Sbjct: 481 TIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWIS- 539

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + K  + VTYN +I G C++G+ E+A  LL E+ EK L P+  TY  +   + + G
Sbjct: 540 --KGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 184/361 (50%), Gaps = 42/361 (11%)

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI--------- 255
           A+ I   MK L + P ++T N LI+   +      +  + A+F ++++ G+         
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 256 ----------LPNEVTFNTLID--GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
                      P+  ++NT++D    C+      ++    E+   G+    +TYN++I+G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            C +G++++A   R++M+    KP++ T N L+ G C + +++ A  LF+    +G +  
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS-REGNVEGVRNIM 422
            +TYNT+I   CKEGR E+AF +   M ++ + PD  TYN ++  L+  EG VE      
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           N++V    +  L T NIL+  LC +G    A+ L +       + K  + VTYN +I G 
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI---SKGKAIDAVTYNTIISGL 450

Query: 483 CQKGKLEDANGLLNELLEK-GLIPNQTTYQIV----------------REEMMEKGFIPD 525
           C++G+ E+A  LL E+ EK GL+P+QTTY  +                R +M+EK F PD
Sbjct: 451 CKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPD 510

Query: 526 I 526
           +
Sbjct: 511 L 511



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 40/343 (11%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  + I  + ++  Y +  +    F+   +  +   K  + +CN LLR L  EG  ++  
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN------ 225
            ++     +   ++  ++N +++GLCK G+  +A D++ +M+   + P   TYN      
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCAL 379

Query: 226 ------------------------------ILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
                                         IL+ G C +G +    K   +F   +  G 
Sbjct: 380 ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK---LFNTWISKGK 436

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGS-HGIAAGVVTYNSLINGLCVDGKLDEAV 314
             + VT+NT+I G CK+     A  +  EM   +G+     TYN++I G C +G++++A 
Sbjct: 437 AIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAF 496

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
             R++M+    KP++ T N L+ G C++ ++ KA  LF+    +G +   +TYNT+I   
Sbjct: 497 QFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGL 556

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           CKEGR E+AF +   M ++ + PD  TYN ++  L+  G +E 
Sbjct: 557 CKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEA 599


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   + + + +S +   V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+    +  +    +C  +L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G+LD A+ +  +M+  G  P+VVT N LI G CKK  +++AR L D++S +GL
Sbjct: 248 IDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF +R  M+   +  D   Y  LI GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E++  G++    TY +++   CK G  KKA  LL E   M++  + P +VT
Sbjct: 368 MLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLRE---MQRNGRVPCVVT 418



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 164/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  +  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  +++A  LF ++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML++G  PDV TYN LI GL ++G+++  R +++E+ 
Sbjct: 244 FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A  L + M    KE    + V Y  LI G CQ+G
Sbjct: 304 RKGLKPDKITYTTLIDGSCKEGDLETAFELRERMI---KESIRLDDVVYTALIFGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 361 RAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKG 395



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 62/251 (24%)

Query: 332 SNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNS 389
           + +LI     +K  + A  +F  I E +G   S +  ++ LI AY + G + DA      
Sbjct: 32  AKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRL 91

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
                      T   ++  L +    + V     E++  G  A L  +NIL+   CK+G+
Sbjct: 92  TKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151

Query: 450 SKKAVSLLDEMFKMEKEKKW---PNIVTYNV----------------------------- 477
            + A S+ D +       KW   P++V++N                              
Sbjct: 152 MRLAQSVFDAI------TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPD 205

Query: 478 ------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
                 LI G C++ ++++ANGL  E+L+ GL+PN  T+                  +  
Sbjct: 206 VYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYR 265

Query: 516 EMMEKGFIPDI 526
           +M+ +GF PD+
Sbjct: 266 QMLNQGFSPDV 276


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 221/434 (50%), Gaps = 38/434 (8%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  +    K       F +    G   ++++ N LL  L  E +  +   ++ +M +
Sbjct: 19  NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                N+ +F  ++NGLC+ G++ +A  +++ M   G+ P  +TY  ++DG CK   +G 
Sbjct: 79  P----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK---MGD 131

Query: 240 MYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              A  + + M E + I P+ V ++ +IDG  KD   + A  +F EM   GI   +VTY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +ING C  GK  EA  L  EM+   + P+VVT + LIN   K+  +  A+ L  ++   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAF----AMRNSMLD-------RGVLPDVSTYNCLIA 407
           G+ P+V+T NTL+D  C  G+++DA     AM+ SM+D        GV PDV TYN LI+
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL  EG       +  E+ + G+    VTY+ ++  LCK  +  +A  + D    M  + 
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD---SMGSKS 368

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-QIVR------------ 514
             PNIVT+N LI G+C+ G ++D   L  E+  +G++ N  TY  ++R            
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428

Query: 515 ---EEMMEKGFIPD 525
              +EM+  G  PD
Sbjct: 429 DIFQEMISSGVYPD 442



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 191/325 (58%), Gaps = 14/325 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G+  D + ++ EM+ + I  ++ +++ ++NG C +GK ++A 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++++M    +SP VVT++ LI+   K+G +     A  + ++M+ +G+ PN VT NTL+
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNS---AQDLLQEMISSGVCPNVVTCNTLL 264

Query: 267 DGFCKDENISAAMKVFEEM--------GSH---GIAAGVVTYNSLINGLCVDGKLDEAVA 315
           DG C    +  A+++F+ M         +H   G+   V TYN LI+GL  +GK  EA  
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM   G+ P+ VT +++ING CK+  +++A  +FD +  +  SP+++T+NTLI  YC
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ++D   +   M  RG++ +  TY  LI G  + GN+ G  +I  E++++G+    +
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
           T   ++  L    + KKA+++L+E+
Sbjct: 445 TIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 186/339 (54%), Gaps = 16/339 (4%)

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           +I  ++ SFN ++   C   KL  A      +  LG  P +VT+N L+ G C +    ++
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED---RV 66

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +A  +F  M +    PN VTF TL++G C++  +  A+ + + M   G+    +TY ++
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 301 INGLCVDGKLDEAVALRDEMMA-SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++G+C  G    A+ L  +M   S +KP+VV  +A+I+G  K      A+ LF ++ ++G
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P ++TY+ +I+ +C  G+  +A  +   ML R + PDV T++ LI  L +EG++   +
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--MEKEKKW------PN 471
           +++ E++++G+   +VT N L+  LC  GK K A+ +   M K  M+ +         P+
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + TYN+LI G   +GK  +A  L  E+  +G++P+  TY
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 159/322 (49%), Gaps = 31/322 (9%)

Query: 21  WSKLKNTDPNTVILQLFNSDADPVLI-----LRYFCWSTKELRASHSLLLTGRLLHSLVV 75
           W   ++TD   + +++ +    P ++     +  FC S K   A        RLL  ++V
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ-------RLLQEMLV 215

Query: 76  AKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
            K  P + +F   ++  VK G   S   +   +   S  +C N +  + L+     + K 
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 133 HLGFEAFKRAGDY-----------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
               E FK                G++  V + N L+  L+ EGKF + E +Y+EM  R 
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +  +++ ++NGLCK  +L++A+ + + M S   SP +VT+N LI GYCK G +    
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   +F +M   GI+ N +T+ TLI GF K  NI+ ++ +F+EM S G+    +T  +++
Sbjct: 394 E---LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 302 NGLCVDGKLDEAVALRDEMMAS 323
            GL    +L +A+A+ +E+  S
Sbjct: 451 TGLWSKEELKKALAMLEELQMS 472



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 136/258 (52%), Gaps = 26/258 (10%)

Query: 288 HG--IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
           HG  I   + ++N LI   C   KL  A++   ++   G  P +VT N L++G C +  V
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  LF     Q   P+V+T+ TL++  C+EGR+ +A A+ + M++ G+ P+  TY  +
Sbjct: 67  SEALDLF----HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 406 IAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           + G+ + G+     N++ ++   + ++  +V Y+ ++  L KDG+   A +L  EM   +
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM---Q 179

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------------- 510
            +  +P+IVTY+ +I GFC  GK  +A  LL E+L + + P+  T+              
Sbjct: 180 DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLN 239

Query: 511 --QIVREEMMEKGFIPDI 526
             Q + +EM+  G  P++
Sbjct: 240 SAQDLLQEMISSGVCPNV 257



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 25/208 (12%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++ + N LI  FC    +  A   F  +++ G  P+++T+NTL+   C E R+ +A  + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M      P+V T+  L+ GL REG V     +++ +V +G++   +TY  +V  +CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G +  A++LL +M ++   K  P++V Y+ +I G  + G+  DA  L  E          
Sbjct: 130 GDTVSALNLLRKMEELSHIK--PDVVIYSAIIDGLWKDGRHTDAQNLFIE---------- 177

Query: 508 TTYQIVREEMMEKGFIPDIEGHMYNISG 535
                    M +KG  PDI  +   I+G
Sbjct: 178 ---------MQDKGIFPDIVTYSCMING 196


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 220/409 (53%), Gaps = 6/409 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++++ + L+   V+  K  L    +   G  G+K  V++ N L++AL +  +      + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R +  +  +F  ++ G  + G +  A  +   M  +G S   VT N+LI+GYCK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK- 263

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G++  A    +  + +G  P+++T+NT ++G C+++++  A+KV + M   G    V
Sbjct: 264 --LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN ++N LC +G+L+EA  + ++M+  G  P++ T N LI   C    +E+A  L   
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G+SP V T+N LI+A CK G    A  +   M + G  PD  TYN LI  L   G 
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    +++ ++ + G     +TYN ++  LCK  + ++A  + D+   M+ +    N +T
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ---MDLQGISRNAIT 498

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +N LI G C+  K++DA GL+N+++ +GL PN  TY  +     ++G I
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDI 547



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 231/457 (50%), Gaps = 60/457 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRR 180
           LM  +V+            R  + G  ++ ++ N L+    K G+ ED + Y+ +E+   
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             E +  ++N  +NGLC+   +  A  +M+ M   G  P V TYNI+++  CK G   ++
Sbjct: 282 -FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG---QL 337

Query: 241 YKADAVFKDMVENGILPNEVTFNTLI---------------------------------- 266
            +A  +   MV+ G LP+  TFNTLI                                  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 267 -DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +  CK  +   A+++FEEM + G     VTYN+LI+ LC  GKL +A+ L  +M ++G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + +T N +I+G CKK  +E+A  +FD +  QG+S + IT+NTLID  CK+ +++DAF 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+  G+ P+  TYN ++    ++G+++   +I+  +  NG    +VTY  L+  LC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+++ A+ +L  M +++  +  P    YN +++   ++  + DA  L  E+ E G  P
Sbjct: 578 KAGRTQVALKVLRGM-RIKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  TY+IV                   EM++KGFIP+
Sbjct: 635 DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 215/387 (55%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V + N ++  L K G+ E+ + +  +M  R    ++ +FN ++  LC   +L +A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   +   GVSP V T+NILI+  CK   +G  + A  +F++M  +G  P+EVT+NTL
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCK---VGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C    +  A+ + ++M S G     +TYN++I+GLC   +++EA  + D+M   G+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +T N LI+G CK K ++ A  L + +  +GL P+ ITYN+++  YCK+G ++ A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G   DV TY  LI GL + G  +    ++  +   GMR     YN ++ +L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG-KLEDANGLLNELLEKGLI 504
           +    + A+SL  EM ++ +    P+ +TY ++ +G C+ G  +++A   + E+++KG I
Sbjct: 613 RRNNIRDALSLFREMAEVGEP---PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 505 PNQTTYQIVREEMMEKG----FIPDIE 527
           P  ++++++ E ++  G    FI  IE
Sbjct: 670 PEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +LN L +  K+     +  +M + G+ P VVT+N L+   C+     ++  A  + +
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH---QVRTAVLMLE 205

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G+ P+E TF TL+ GF ++ +I AA++V   M   G +A  VT N LING C  G
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++++A+    + +A G +P+ +T N  +NG C+   V  A  + D + ++G  P V TYN
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +++  CK G++E+A  + N M+DRG LPD++T+N LIA L     +E   ++  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + T+NIL+ ALCK G    A+ L +E   M+     P+ VTYN LI   C  GKL
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEE---MKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             A  LL ++   G   +  TY  + + + +K  I + E
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 31/364 (8%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           ++L A +    F     VY+E+ R+               L   G L+    ++ +M+  
Sbjct: 59  RMLNAALARDDFAPGPEVYEEIIRK---------------LGAVGALDLMKVLVAEMRRE 103

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN------GILPNEVTFNTLIDGF 269
           G   K+   +  +D Y      G+    DAV  D++ N      GI  + V +N L++  
Sbjct: 104 GHQVKLGVVHSFLDSY-----EGQQLFDDAV--DLILNQLQPLFGIQADTVVYNHLLNVL 156

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +   +     V+ EMG+ GI   VVT+N+L+  LC   ++  AV + +EM + G+ P+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   L+ GF ++  +E A  +   + E G S + +T N LI+ YCK GR+EDA      
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
            +  G  PD  TYN  + GL +  +V     +M+ +V  G    + TYNI+V  LCK+G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A  +L++M         P+I T+N LI   C   +LE+A  L  ++  KG+ P+  T
Sbjct: 337 LEEAKGILNQMV---DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 510 YQIV 513
           + I+
Sbjct: 394 FNIL 397



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 4/227 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R++I  + ++    K M+     E F +    G+  + ++ N L+  L K+ K +D   +
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ N  ++N +L   CK G + KA+DI+E M + G    VVTY  LI+G CK
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+   A  V + M   G+ P    +N ++    +  NI  A+ +F EM   G    
Sbjct: 579 A---GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +TY  +  GLC   G + EA     EM+  G  P   +   L  G 
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           + RN+I  + L+    K+ K    F    +    GL+ + ++ N +L    K+G  +   
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + + M     E+++ ++  ++NGLCKAG+   A  ++  M+  G+ P    YN ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-ISAAMKVFEEMGSHGI 290
            ++  I     A ++F++M E G  P+ +T+  +  G C+    I  A     EM   G 
Sbjct: 612 FRRNNI---RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668

Query: 291 AAGVVTYNSLINGL 304
                ++  L  GL
Sbjct: 669 IPEFSSFRMLAEGL 682



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR--GVLPDVSTYNCLI 406
           +VL  ++  +G    +   ++ +D+Y  +   +DA  +  + L    G+  D   YN L+
Sbjct: 94  KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 153

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L     ++ + ++ +E+   G++  +VT+N L+ ALC+  + + AV +L+EM      
Sbjct: 154 NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM---SSR 210

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+  T+  L++GF ++G +E A  +   +LE G    + T  ++     + G + D 
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 527 EGHM 530
            G++
Sbjct: 271 LGYI 274


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 221/427 (51%), Gaps = 27/427 (6%)

Query: 120 DMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           D+  L  + N   HLG     F    +    G + + ++ N L++ L  +G+ +   + +
Sbjct: 44  DLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFH 103

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++  +  +++  S+  +LNGLCK G+   A  ++  ++     P VV YN +IDG CK 
Sbjct: 104 DKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKD 163

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + + Y    ++ +M   GI PN +T++TLI GFC    +  A  +  EM    I   V
Sbjct: 164 KLVNEAYD---LYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNV 220

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY  L++ LC +GK+ EA  L   M   G+KPNVV+ N L++G+C    V+ A+ +F  
Sbjct: 221 YTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHT 280

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + ++G++P+V +YN +ID  CK  R+++A  +   +L + ++P+  TY+ LI G  + G 
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    +++ E+ + G  A +VTY  L+ ALCK+    KA +L     KM++    PN  T
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALF---MKMKERGIQPNKYT 397

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMM 518
           Y  LI G C+ G+ ++A  L   LL KG   N  TY +                ++ +M 
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457

Query: 519 EKGFIPD 525
           E G IPD
Sbjct: 458 ENGCIPD 464



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 213/392 (54%), Gaps = 35/392 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++  N+++ +LVK   +     ++K+M+ + IE +L + N ++N  C  G++  +  ++ 
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKM-----------YKADAVFKDMVENGIL--- 256
            +  LG  P  +T N L+ G C KG + K            ++ D V    + NG+    
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 257 ------------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
                             PN V +NT+IDG CKD+ ++ A  ++ EM + GI   V+TY+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G C+ G+L EA  L +EM+   + PNV T   L++  CK+  V++A+ L   ++++
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P+V++YNTL+D YC  G +++A  M ++M+ +GV P+V +YN +I  L +   V+  
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N++ E+++  M    VTY+ L+   CK G+   A+ LL EM+      +  ++VTY  L
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY---HRGQPADVVTYTSL 366

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +   C+   L+ A  L  ++ E+G+ PN+ TY
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTY 398



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 214/391 (54%), Gaps = 17/391 (4%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   + +V+  N ++  L K+    +   +Y EM  R I  N+ +++ ++ G C AG+L 
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLM 202

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  ++ +M    ++P V TY IL+D  CK+G   K+ +A  +   M + G+ PN V++N
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEG---KVKEAKNLLAVMTKEGVKPNVVSYN 259

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+DG+C    +  A ++F  M   G+   V +YN +I+ LC   ++DEA+ L  E++  
Sbjct: 260 TLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK 319

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + PN VT ++LI+GFCK   +  A  L  ++  +G    V+TY +L+DA CK   ++ A
Sbjct: 320 NMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKA 379

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            A+   M +RG+ P+  TY  LI GL + G  +  + +   L+  G R  + TYN+++  
Sbjct: 380 TALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG 439

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK+G   +A+++     KME+    P+ VT+ ++I+   +K + + A  LL+E++ K L
Sbjct: 440 LCKEGMLDEALAMKS---KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496

Query: 504 I----------PNQT-TYQIVREEMMEKGFI 523
           +          PN+    + +  EM+ KG +
Sbjct: 497 LRFRDFHGERSPNENDKAEKLLHEMIAKGLL 527



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 210/406 (51%), Gaps = 39/406 (9%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D LC++ ++ +               ++ +      G+  +V++ + L+      G
Sbjct: 154 NTIIDGLCKDKLVNE--------------AYDLYSEMDARGIFPNVITYSTLIYGFCLAG 199

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +  +   +  EM  + I  N+ ++  +++ LCK GK+ +A +++  M   GV P VV+YN
Sbjct: 200 QLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYN 259

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DGYC    IG++  A  +F  MV+ G+ PN  ++N +ID  CK + +  AM +  E+
Sbjct: 260 TLMDGYCL---IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREV 316

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +    VTY+SLI+G C  G++  A+ L  EM   G   +VVT  +L++  CK + +
Sbjct: 317 LHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNL 376

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA  LF  + E+G+ P+  TY  LID  CK GR ++A  +   +L +G   +V TYN +
Sbjct: 377 DKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVM 436

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----- 460
           I+GL +EG ++    + +++  NG     VT+ I++ +L +  ++ KA  LL EM     
Sbjct: 437 ISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496

Query: 461 --FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             F+    ++ PN               + + A  LL+E++ KGL+
Sbjct: 497 LRFRDFHGERSPN---------------ENDKAEKLLHEMIAKGLL 527



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 169/301 (56%), Gaps = 8/301 (2%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +P ++ +N ++    K     K Y  A ++FK M   GI P+  T N LI+ FC    ++
Sbjct: 7   TPPIMEFNKIVGSLVKM----KHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            +  V  ++   G     +T N+L+ GLC+ G++ +++   D+++A G + + V+   L+
Sbjct: 63  FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG CK      A  L   I ++   P+V+ YNT+ID  CK+  + +A+ + + M  RG+ 
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+V TY+ LI G    G +     ++NE++   +   + TY IL+ ALCK+GK K+A +L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L     M KE   PN+V+YN L+ G+C  G++++A  + + +++KG+ PN  +Y I+ + 
Sbjct: 243 LAV---MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299

Query: 517 M 517
           +
Sbjct: 300 L 300



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 3/228 (1%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           ++ +N ++  L        A++L  +M   G++P++ T N LIN FC    +  +  +  
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            I + G  P+ IT NTL+   C +G ++ +    + ++ +G   D  +Y  L+ GL + G
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
                  ++  + +   R  +V YN ++  LCKD    +A  L  EM   +    +PN++
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM---DARGIFPNVI 186

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TY+ LI GFC  G+L +A GLLNE++ K + PN  TY I+ + + ++G
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEG 234


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 215/394 (54%), Gaps = 10/394 (2%)

Query: 133 HLGFEAFKRAG---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           H+GF AF   G     G + + ++   +++ L   G+       +  +  +   L+  ++
Sbjct: 128 HMGF-AFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTY 186

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++NGLCK G   +A +++  M+   V P VV YN+++DG CK G + +   A  ++ D
Sbjct: 187 GTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE---ARDLYSD 243

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +V  GI P+  T+  LI GFC         ++  +M    +   V TYN LI+ LC  G 
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L +A  +R+ M+  G +P++VT N L++G+C    V +AR LFD  +E G++P V +YN 
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI  YCK  R+++A ++ N M  + + P++ TY+ LI GL + G +     + + + + G
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               ++TYNI++ ALCK     KA+ L + MF+       PN+ +YN+LI G+C+  +++
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFE---RGLTPNVSSYNILINGYCKSKRID 480

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +A  L  E+  + L+P+  TY  + + + + G I
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRI 514



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 194/349 (55%), Gaps = 8/349 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            FE   +     ++ +V+  N ++  L K+G   +   +Y ++  R I+ ++ ++  +++
Sbjct: 202 AFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIH 261

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G+  + + ++ DM    V+  V TYNILID  CKKG +GK +    +   M+E G
Sbjct: 262 GFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNL---MIERG 318

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ VTFNTL+ G+C   ++  A K+F+     GI   V +YN LI G C + ++DEA+
Sbjct: 319 QRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEAL 378

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L ++M    L PN+VT ++LI+G CK   +  A  LF  I + G SP+VITYN ++DA 
Sbjct: 379 SLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDAL 438

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++ A  + N M +RG+ P+VS+YN LI G  +   ++   N+  E+    +    
Sbjct: 439 CKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDS 498

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGF 482
           VTYN L+  LCK G+   A     E+F +  +   P +++TYN+L   F
Sbjct: 499 VTYNCLIDGLCKSGRISHAW----ELFNVMHDGGPPVDVITYNILFDAF 543



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 170/301 (56%), Gaps = 3/301 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V +   L+      G++ +V  +  +M  R + LN+ ++N +++ LCK G L KA
Sbjct: 248 GIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKA 307

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   M   G  P +VT+N L+ GYC    +    +A  +F    E GI P+  ++N L
Sbjct: 308 HDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV---VEARKLFDTFAECGITPDVWSYNIL 364

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G+CK+  I  A+ +F +M    +A  +VTY+SLI+GLC  G++  A  L   +   G 
Sbjct: 365 IIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGP 424

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV+T N +++  CK +LV+KA  LF+ + E+GL+P+V +YN LI+ YCK  R+++A  
Sbjct: 425 SPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMN 484

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  R ++PD  TYNCLI GL + G +     + N + + G    ++TYNIL  A  
Sbjct: 485 LFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFS 544

Query: 446 K 446
           K
Sbjct: 545 K 545



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 213/431 (49%), Gaps = 29/431 (6%)

Query: 128 KNMKPHLGFEA-------FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +N K   GF+A       F R        SV+  N +L ++VK   +     + K+M  R
Sbjct: 48  QNAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLR 107

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            I  ++ + + ++N  C  G +  A  ++  +   G     +T   ++ G C  G   ++
Sbjct: 108 GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCING---EV 164

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA      +V  G L +EVT+ TLI+G CK      A ++  +M    +   VV YN +
Sbjct: 165 RKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMI 224

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++GLC DG + EA  L  +++  G+ P+V T   LI+GFC      +   L  D+ ++ +
Sbjct: 225 VDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNV 284

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           + +V TYN LIDA CK+G +  A  MRN M++RG  PD+ T+N L++G     +V   R 
Sbjct: 285 NLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARK 344

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +     G+   + +YNIL+   CK+ +  +A+SL +   KM  +K  PNIVTY+ LI 
Sbjct: 345 LFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFN---KMNYKKLAPNIVTYSSLID 401

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------------MMEKGFIP 524
           G C+ G++  A  L + + + G  PN  TY I+ +                 M E+G  P
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTP 461

Query: 525 DIEGHMYNISG 535
           ++  +   I+G
Sbjct: 462 NVSSYNILING 472



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 5/187 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + KN +     ++F+ ++     L  N +    L+    K+ +    +E F    D G  
Sbjct: 368 YCKNNRIDEALSLFNKMN--YKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPS 425

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V++ N +L AL K    +    ++  M  R +  N+ S+N ++NG CK+ ++++A ++
Sbjct: 426 PNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNL 485

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+M    + P  VTYN LIDG CK G I   ++   +F  M + G   + +T+N L D 
Sbjct: 486 FEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWE---LFNVMHDGGPPVDVITYNILFDA 542

Query: 269 FCKDENI 275
           F K +++
Sbjct: 543 FSKIQHV 549



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +    K+G+ +    +F A+     S   N I  ++++ A  K        E F    
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPS--PNVITYNIMLDALCKIQLVDKAIELFNLMF 455

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL  +V S N L+    K  + ++   +++EM RR +  +  ++N +++GLCK+G+++
Sbjct: 456 ERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRIS 515

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            A ++   M   G    V+TYNIL D + K
Sbjct: 516 HAWELFNVMHDGGPPVDVITYNILFDAFSK 545


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 216/411 (52%), Gaps = 43/411 (10%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    K+G+  D E + + M  R I+ N+ S+N +L GLCK  + ++A +++ DM S
Sbjct: 14  NALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMIS 73

Query: 215 LG--VSPKVVTYNILIDGYCKKGG-----------IGKMYKADAVF-------------- 247
            G   +P +VTY+ L+ GYCK G            I +  + DA+               
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 248 -------KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
                  ++M+  G  P  +TFNTLI G C+++N+  A  + ++M + G+ A VVTYN+L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTL 193

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++GLC  G+L EA  L + M ASG  P+VV  ++ + G CK   V  A  + + + +   
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVR 419
            P+V+TYNT++D  CK G+++ A  M   M    G   +V  Y+ ++ GL + G  +  R
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++M  +   G R  +VTY+ LV  LCK GK ++AV  + EM  ME  K  PN VTY  L+
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AMEGCK--PNAVTYCSLV 370

Query: 480 KGFCQKGKLEDANGLLNELLEKGLI-----PNQTTYQIVREEMMEKGFIPD 525
            G C  G+L +A  ++ E+   G       P+ +TY  +   + + G I D
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDD 421



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 38/369 (10%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R     N  +FN ++NG  K G+      ++E M +  + P VV+YN L++G CK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCK--- 57

Query: 237 IGKMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           + + ++A+ + +DM+  G    P+ VT++TL+ G+CK   +  + ++ +E+ S G+    
Sbjct: 58  LERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           + Y  ++  LC   +L EA+ L +EM+ +G  P ++T N LI+G C++K +E A  L   
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++  G+   V+TYNTL+D  CK GR+++A  +   M   G  PDV  Y+  + GL + G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------ 462
           V     ++ ++ ++     +VTYN ++  LCK GK   A+ ++++M              
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 463 ---------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
                                M +    P++VTY+ L+ G C+ GK+E+A   + E+  +
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 502 GLIPNQTTY 510
           G  PN  TY
Sbjct: 358 GCKPNAVTY 366



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 180/321 (56%), Gaps = 9/321 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ N L+    +E   E  + + ++M    ++ ++ ++N +++GLCKAG+L +A
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E MK+ G +P VV Y+  + G CK    GK+  A  V + M ++   PN VT+NT+
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKS---GKVLDAHQVLEQMRDSHHDPNVVTYNTI 263

Query: 266 IDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +DG CK   I  A+++ E+M S  G    VV Y+++++GLC  G+  EA ++ + M  +G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +P+VVT ++L+NG CK   +E+A     +++ +G  P+ +TY +L+   C  GR+ +A 
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383

Query: 385 AMRNSMLDRGVL-----PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            M   M   G       P VSTYN LI GL + G ++        + + G     V+Y+ 
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443

Query: 440 LVGALCKDGKSKKAVSLLDEM 460
           +V  L + G++ +A  +L E+
Sbjct: 444 IVEGLARSGRALQAEMILSEV 464



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 216/440 (49%), Gaps = 15/440 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RLL ++      P + S+   L    K  ++     +   + +       + +    L+ 
Sbjct: 31  RLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS 90

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K  K     E  K     GL+   L   +++ +L K  +  +   + +EM R     
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            L +FN +++G C+   L  A  +++ M + GV   VVTYN L+DG CK    G++ +A+
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKA---GRLQEAE 207

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M  +G  P+ V +++ + G CK   +  A +V E+M        VVTYN++++GL
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267

Query: 305 CVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           C  GK+D A+ + ++M +S G   NVV  + +++G CK    ++AR + + ++  G  P 
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+TY++L++  CK G++E+A      M   G  P+  TY  L+ GL   G +     ++ 
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 424 ELVNNGMR-----AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           E+ + G         + TYN L+G LCK G+   A+       +M  +   P+ V+Y+ +
Sbjct: 388 EMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ---RMRSQGCDPDGVSYSTI 444

Query: 479 IKGFCQKGKLEDANGLLNEL 498
           ++G  + G+   A  +L+E+
Sbjct: 445 VEGLARSGRALQAEMILSEV 464



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +G  PN VT NAL+NGF K+        L + ++ + + P+V++YN L++  CK  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 380 MEDAFAMRNSMLDRG--VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +A  +   M+ RG    PD+ TY+ L++G  + G VE  R ++ E+++ G+R   + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             +V +LCK  +  +A+ LL+EM +       P ++T+N LI G C++  LE A+ LL +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRA---GCCPTLITFNTLISGCCREKNLEMADSLLQK 177

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +   G+  +  TY  + + + + G + + E
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAE 207


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 206/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    +  +M++ ++E  +  +N +++GLCK   ++ A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M++ G+ P VVTY+ LI   C     G+   A  +  DM+E  I P+  TF+ L
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCN---YGRWSDASRLLSDMIERKINPDVFTFSAL 127

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   +VTY+SLING C+  +LDEA  + + M++   
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LI GFCK K VE+   +F ++S++GL  + +TYN LI    + G  + A  
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV P++ TYN L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   P++V YN +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 308 KAGKVEDGWDLF---CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364

Query: 506 NQTTYQIVREEMMEKG 521
           N   Y  +    +  G
Sbjct: 365 NSGCYNTLIRARLRDG 380



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 182/322 (56%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK     G++ +V++ + L+  L   G++ D   +  +M  R+I  ++ +F+ +++   K
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GKL +A  + ++M    + P +VTY+ LI+G+C      ++ +A  +F+ MV     P+
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD---RLDEAKQMFEFMVSKHCFPD 190

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+NTLI GFCK + +   M+VF EM   G+    VTYN LI GL   G  D A  +  
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM++ G+ PN++T N L++G CK   +EKA V+F+ +    + P++ TYN +I+  CK G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ED + +  ++  +GV PDV  YN +I+G  R+G+ E    +  E+  +G       YN
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            L+ A  +DG  + +  L+ EM
Sbjct: 371 TLIRARLRDGDREASAELIKEM 392



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 214/406 (52%), Gaps = 10/406 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   L    ++++ L     K     L F    +     L+  VL  N ++  L K    
Sbjct: 12  CQPDLVTYGVVVNGL----CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 67

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D   ++KEM+ + I  N+ +++ +++ LC  G+ + AS ++ DM    ++P V T++ L
Sbjct: 68  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 127

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           ID + K+   GK+ +A+ ++ +MV+  I P+ VT+++LI+GFC  + +  A ++FE M S
Sbjct: 128 IDAFVKE---GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                 VVTYN+LI G C   +++E + +  EM   GL  N VT N LI G  +    + 
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 244

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ +F ++   G+ P+++TYNTL+D  CK G++E A  +   +    + P + TYN +I 
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G+ + G VE   ++   L   G++  +V YN ++   C+ G  ++A +L  E   M+++ 
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE---MKEDG 361

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             PN   YN LI+   + G  E +  L+ E+   G   + +T  +V
Sbjct: 362 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 177/318 (55%), Gaps = 6/318 (1%)

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ M + G  P +VTY ++++G CK+G     +    +   M +  + P  + +NT+ID
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN---LLNKMEQGKLEPGVLIYNTIID 59

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK +++  A+ +F+EM + GI   VVTY+SLI+ LC  G+  +A  L  +M+   + P
Sbjct: 60  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +V T +ALI+ F K+  + +A  L+D++ ++ + PS++TY++LI+ +C   R+++A  M 
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ +   PDV TYN LI G  +   VE    +  E+   G+    VTYNIL+  L + 
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G    A  +  EM     +   PNI+TYN L+ G C+ GKLE A  +   L    + P  
Sbjct: 240 GDCDMAQEIFKEMVS---DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296

Query: 508 TTYQIVREEMMEKGFIPD 525
            TY I+ E M + G + D
Sbjct: 297 YTYNIMIEGMCKAGKVED 314



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 182/312 (58%), Gaps = 6/312 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V + + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A 
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 176

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++ +   VF++M + G++ N VT+N LI
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEVFREMSQRGLVGNTVTYNILI 233

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G  +  +   A ++F+EM S G+   ++TYN+L++GLC +GKL++A+ + + +  S ++
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P + T N +I G CK   VE    LF ++S +G+ P V+ YNT+I  +C++G  E+A A+
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G LP+   YN LI    R+G+ E    ++ E+ + G  AG  +   LV  +  
Sbjct: 354 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLH 412

Query: 447 DGKSKKAVSLLD 458
           DG+  K  S LD
Sbjct: 413 DGRLDK--SFLD 422



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 139/244 (56%), Gaps = 5/244 (2%)

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           M + + M + G    +VTY  ++NGLC  G  D A  L ++M    L+P V+  N +I+G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            CK K ++ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + M++R + PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V T++ LI    +EG +     + +E+V   +   +VTY+ L+   C   +  +A     
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA----K 176

Query: 459 EMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           +MF+ M  +  +P++VTYN LIKGFC+  ++E+   +  E+ ++GL+ N  TY I+ + +
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236

Query: 518 MEKG 521
            + G
Sbjct: 237 FQAG 240



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 82/143 (57%), Gaps = 3/143 (2%)

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           A+ + M+ +G  PD+ TY  ++ GL + G+ +   N++N++    +  G++ YN ++  L
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK      A++L  EM   E +   PN+VTY+ LI   C  G+  DA+ LL++++E+ + 
Sbjct: 62  CKYKHMDDALNLFKEM---ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
           P+  T+  + +  +++G + + E
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAE 141


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 200/368 (54%), Gaps = 10/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   SV++   LL+ L +  + ++       M  R  E+N+   N V+ G    GKL +A
Sbjct: 277 GCMPSVVTYGFLLQGLCRTRQADEA----CAMLGRLPEVNVVMLNTVIRGCLTEGKLARA 332

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +++ E M S G  P V TY+IL+ G CK G  G   +   +  +M E G  PN VT++TL
Sbjct: 333 TELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR---MLDEMEEKGCAPNIVTYSTL 389

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +  FC++     A  + ++M + G +     YN +I  LC DGKLD+A  L  EM + G 
Sbjct: 390 LHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGC 449

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP++ T N +I   C   L+E+A  +F ++ E+G+  + ITYNTLI A  + GR ++   
Sbjct: 450 KPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLR 509

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + ML  G   DV +YN LI  L +EGNV+    ++ E+V  G++    +YN+L+  LC
Sbjct: 510 LASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELC 569

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK + A+ L  EM     +   P+IVTYN LI G C+ G    A  LL +L  + + P
Sbjct: 570 KAGKVRDALELSKEML---NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 626

Query: 506 NQTTYQIV 513
           +  TY I+
Sbjct: 627 DIVTYNIL 634



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 244/488 (50%), Gaps = 56/488 (11%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK----- 140
           LH+  +  +  +VS  F + +    +L R     D L+L Y + ++  +    F      
Sbjct: 126 LHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLL-YRRMLRDRVPPTTFTFGVAA 184

Query: 141 -------RAGD----------YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
                  RAGD          +G     +    ++ ALV +G   +   +  EM      
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK---------- 233
            ++++FN ++ GLC  G++ +A+ +++ M + G  P VVTY  L+ G C+          
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 234 ----------------KGGI--GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
                           +G +  GK+ +A  +++ M   G  P+  T++ L+ G CK    
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            +A+++ +EM   G A  +VTY++L++  C +G  D+A A+ D+M+A G   N    N +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I   CK   +++A  L  ++  QG  P + TYNT+I   C    ME+A  +  ++++ GV
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 396 LPDVSTYNCLIAGLSREGNV-EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + +  TYN LI  L R G   EG+R + +E++ +G +  +++YN L+ ALCK+G   +++
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLR-LASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           +LL+EM  + K  K PN  +YN+LI   C+ GK+ DA  L  E+L +GL P+  TY  + 
Sbjct: 544 ALLEEM--VTKGIK-PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 515 EEMMEKGF 522
             + + G+
Sbjct: 601 NGLCKVGW 608



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 190/372 (51%), Gaps = 39/372 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V+  N ++R  + EGK      +Y+ M  +    ++ +++ +++GLCK G+   A  ++
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKG-------------------------GI------- 237
           ++M+  G +P +VTY+ L+  +C+ G                         GI       
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GK+ +A  + ++M   G  P+  T+NT+I   C ++ +  A  +F  +   G+ A  +TY
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+LI+ L  +G+  E + L  EM+  G + +V++ N LI   CK+  V+++  L +++  
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G+ P+  +YN LI+  CK G++ DA  +   ML++G+ PD+ TYN LI GL + G    
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---MEKEKKW----P 470
             N++ +L N  +   +VTYNIL+   CK      A  LLD+      +  E+ W     
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671

Query: 471 NIVTYNVLIKGF 482
           N V   V ++G+
Sbjct: 672 NFVRQTVNLEGY 683



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 162/344 (47%), Gaps = 35/344 (10%)

Query: 204 KASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEV 260
           +A  +++ M +   VSP   +YN+++    +         ADA+  ++ M+ + + P   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARAD-----CHADALLLYRRMLRDRVPPTTF 178

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF       C+      A+ +   M  HG     V Y ++I+ L   G + EA  L DEM
Sbjct: 179 TFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM 238

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G   +V T N L+ G C    V +A  L D +  QG  PSV+TY  L+   C+  + 
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298

Query: 381 EDAFAMRNSMLDRGVLPDVST--YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++A AM       G LP+V+    N +I G   EG +     +   + + G    + TY+
Sbjct: 299 DEACAM------LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYS 352

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+  LCK G+   AV +LDE   ME++   PNIVTY+ L+  FC+ G  +DA  +L+++
Sbjct: 353 ILMHGLCKLGRFGSAVRMLDE---MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409

Query: 499 LEKGLIPNQTTY--------------QIVR--EEMMEKGFIPDI 526
           L KG   N   Y              Q  R  +EM  +G  PDI
Sbjct: 410 LAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI 453



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 3/188 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + L+ A ++N +   G         +G +  V+S N L++AL KEG  +    + 
Sbjct: 487 NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALL 546

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  + I+ N  S+N ++N LCKAGK+  A ++ ++M + G++P +VTYN LI+G CK 
Sbjct: 547 EEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK- 605

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G  + A  + + +    + P+ VT+N LI   CK   +  A  + ++  S GI    
Sbjct: 606 --VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNE 663

Query: 295 VTYNSLIN 302
            T+  ++ 
Sbjct: 664 RTWGMMVQ 671


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 213/422 (50%), Gaps = 42/422 (9%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +E F      G+   V + N+LL  L K+G+ ++ E +  ++ ++ +  NL +FN  + 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC+ G L+ A  +++ +   G++P VVTYN LI G CK   +    +A+     +V  G
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNV---VEAEKYLHKLVNGG 316

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+  T+NTLIDG+CK   +  A K+ +     G      TY SLINGLC + ++D A+
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS------------- 361
           AL +  +  GLKP V+  N LI G C++ L+ +A  + +++SE G S             
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436

Query: 362 ----------------------PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
                                 P V T+NTLID YCK+ +ME    + N M   GV PDV
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TYN ++ GLS+    E +      +V  G     +TYNIL  +LCK GK  +A+ L+DE
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT-TYQIVREEMM 518
           +     +   P+ V++  +I GF   G L+ A  L   + E+  + + T TY I+     
Sbjct: 557 IL---NKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFA 613

Query: 519 EK 520
           EK
Sbjct: 614 EK 615



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 233/476 (48%), Gaps = 29/476 (6%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   +++ V++G F     +F  L   +  +  +     + + ++ +  +PH   
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVF--LRMKNVGIVPDVYTFTIRIKSFCRTKRPHSAL 166

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                    G + + ++   ++    +E    +   ++ +M R  I  ++ +FN +L+ L
Sbjct: 167 RLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTL 226

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-GKMYKADAVFKDMVENGI 255
           CK G++ ++  ++  +   G+   + T+NI I G C+KG + G M   D+V ++    G+
Sbjct: 227 CKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE----GL 282

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VT+NTLI G CK+ N+  A K   ++ + G+     TYN+LI+G C  G L  A  
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +    +  G  P+  T  +LING C+   +++A  LF+    +GL P+VI YN LI   C
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +EG +  A  M N M + G   D+ TYN +I GL + G V    N+MN+ +  G    + 
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVF 462

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T+N L+   CK  K +  + +L+   KM      P+++TYN ++ G  +  K ED     
Sbjct: 463 TFNTLIDGYCKQLKMETTIQILN---KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETF 519

Query: 496 NELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
             ++EKG +PN+ TY I+ E                E++ KG  PD       ISG
Sbjct: 520 ETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 215/423 (50%), Gaps = 28/423 (6%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M +Y +  K     + F+R   Y  + SVLS N ++  LV+ G F+    V+  MK   I
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             ++ +F   +   C+  + + A  ++ +M S G     V Y  ++ G+ ++      Y+
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN-----YR 197

Query: 243 ADA--VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +A  +F DM+  GI P+  TFN L+   CK   +  + ++  ++   G+ + + T+N  
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I GLC  G L  A+++ D ++  GL P+VVT N LI G CK   V +A      +   GL
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TYNTLID YCK G +++A  +    + +G +PD  TY  LI GL +   ++    
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + N  +  G++  ++ YN+L+  LC++G   +A+ +++E   M +     +I TYN++I 
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNE---MSENGCSSDIWTYNLVIN 434

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPN-----------------QTTYQIVREEMMEKGFI 523
           G C+ G + DAN L+N+ + KG +P+                 +TT QI+  +M   G  
Sbjct: 435 GLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILN-KMWSHGVT 493

Query: 524 PDI 526
           PD+
Sbjct: 494 PDV 496



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 4/323 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F  A   GLK +V+  N L++ L +EG       +  EM       ++ ++N V+NGLCK
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G ++ A+++M D  + G  P V T+N LIDGYCK+    KM     +   M  +G+ P+
Sbjct: 439 MGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL---KMETTIQILNKMWSHGVTPD 495

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+N++++G  K       M+ FE M   G     +TYN L   LC  GK++EA+ L D
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKE 377
           E++  G+ P+ V+   +I+GF     ++ A  LF  + EQ  +S +  TYN +I+A+ ++
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEK 615

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +     +   M   G  PD  TY  +I G    GN +     + E++  G    L T+
Sbjct: 616 LDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675

Query: 438 NILVGALCKDGKSKKAVSLLDEM 460
             ++  LC   +  +AV ++  M
Sbjct: 676 GRVINCLCVQHRVHEAVDIIHFM 698



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 4/247 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           + L+  Y K +K     +   +   +G+   V++ N +L  L K  K ED+   ++ M  
Sbjct: 465 NTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE 524

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +    N  ++N +   LCKAGK+N+A D+++++ + G++P  V++  +I G+   G +  
Sbjct: 525 KGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKG 584

Query: 240 MYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            Y+   +F+ M E   +     T+N +I+ F +  ++    K+F EMG+ G A    TY 
Sbjct: 585 AYQ---LFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +I+G C+ G  D       EM+  G  P++ T   +IN  C +  V +A  +   +   
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701

Query: 359 GLSPSVI 365
           G+ P V+
Sbjct: 702 GIVPEVV 708



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 401 TYNCLIAGLSREGNVEGVRNIMNEL---VNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           TY C+I  L   GN   + N++ E    ++N +  G     + +GA+   G+  K    +
Sbjct: 42  TYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEG-----VYIGAMKSYGRKGKVQEAV 96

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           D   +M+     P++++YN ++    + G  + A+ +   +   G++P+  T+ I
Sbjct: 97  DVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 253/510 (49%), Gaps = 55/510 (10%)

Query: 69  LLHSLVVAKKYPKIRSFLHMF---VKNGKFTSVSTIFHALS----TCSDSLCRNSIIIDM 121
           L H +V  K  P +  F  +F   +    +++V ++F  +       SDS      I+++
Sbjct: 49  LFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS------ILNI 102

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           +  +Y    +    F         G+  +V++ N LL  L  E K  D   ++K++ R +
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 182 I------------------------------------ELNLDSFNFVLNGLCKAGKLNKA 205
           I                                    + ++ +++ V++ LCK   L+ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++ +MK   + P + TYN LIDG CK   +G+  K   +  +MV   I PN  TF+ L
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCK---LGQWEKVKTLLSEMVNLNINPNVHTFSIL 279

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CK+  +  A +V   M   G+   ++TY+++++G C+ G++D A  + + +   G+
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPN+ + + LING+CKKK + KA  LF +IS++GL P  +TY+T++    + GR+ DA  
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + ML  G  PD+  ++ L+ G  + G VE    + ++L  N     +  Y +++  LC
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+ + ++A ++ +   K+      P++ TYNV+I GFC++G  ++  G+L ++ + G   
Sbjct: 460 KNDRVREAHAIFE---KLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPA 516

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           N  TY ++ +       I +I   M  ++G
Sbjct: 517 NNITYNVIMQGFFRSNKISEIVSFMKEMAG 546



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 205/379 (54%), Gaps = 6/379 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V + + ++ AL K+   +    +  EMK++ I  N+ ++N +++GLCK G+  K   
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M +L ++P V T++ILIDG CK+   GK+  AD V + M+E G+ P+ +T++ ++D
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKE---GKVEDADEVMRHMIEKGVEPDIITYSAIMD 316

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+C    +  A +VF  +   GI   + +Y+ LING C    L +A+ L  E+   GLKP
Sbjct: 317 GYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKP 376

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + VT + +++G  +   +  A+ +FD++   G +P +  ++TL+  Y K G +E+A  + 
Sbjct: 377 DTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLF 436

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + +       ++S Y  +I GL +   V     I  +L + G+   + TYN+++   C++
Sbjct: 437 SKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCRE 496

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G   +   +L    KME      N +TYNV+++GF +  K+ +    + E+  +G   + 
Sbjct: 497 GLFDEVKGILR---KMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDA 553

Query: 508 TTYQIVREEMMEKGFIPDI 526
           TT  ++   + E   I D+
Sbjct: 554 TTTGVLINVLKENPSIVDM 572



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 179/373 (47%), Gaps = 36/373 (9%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            +D   ++  M R +   ++  F+ +   +      +    +  +M+ LG+       NI
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 227 LIDGYCKK-----------------------------GGI---GKMYKADAVFKDMVENG 254
           + + YC +                             GG+    K+  A  +FK +V   
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 255 IL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           I  PNEV + T+++G  K  +    + +   M        V TY+ +I+ LC D  LD A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L +EM    + PN+ T N+LI+G CK    EK + L  ++    ++P+V T++ LID 
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CKEG++EDA  +   M+++GV PD+ TY+ ++ G    G V+  R + N L + G++  
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + +Y+IL+   CK     KA+ L  E   + ++   P+ VTY+ ++ G  + G++ DA  
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGE---ISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 494 LLNELLEKGLIPN 506
           + +E+L  G  P+
Sbjct: 400 IFDEMLRVGPTPD 412



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 4/280 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++F  MV    LP+ + F+ L       ++ SA + +F EM   GI       N + N
Sbjct: 46  AVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTN 105

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLS 361
             C+  ++D A ++    + +G+  NVVT N L+ G   +  V  A VLF   + E+   
Sbjct: 106 SYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE 165

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ + Y T+++   K G  E   ++   M      PDV TY+ +I  L ++ N++   N+
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +NE+    +   + TYN L+  LCK G+ +K  +LL EM  +      PN+ T+++LI G
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN---PNVHTFSILIDG 282

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C++GK+EDA+ ++  ++EKG+ P+  TY  + +    +G
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRG 322



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 55/269 (20%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+AV+L   M+     P+V+  + L       K       LF ++   G+  S    N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA---------------------- 407
           + ++YC   R++ AF++    L  G+  +V T+N L+                       
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 408 --------------GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
                         GLS+ G+ E   +++  +     +  + TY+I++ ALCKD     A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
           ++LL+E   M+++   PNI TYN LI G C+ G+ E    LL+E++   + PN  T+ I 
Sbjct: 223 INLLNE---MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279

Query: 513 ---------------VREEMMEKGFIPDI 526
                          V   M+EKG  PDI
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDI 308


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 231/468 (49%), Gaps = 71/468 (15%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF+    +G+   V  CN++LR L    +++DV  VY EM + R+E  + ++N +L
Sbjct: 185 LCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLL 244

Query: 194 NGLCKAGKLNKASDIMEDMKSL--GVSPKVVTYNILIDGYCKKGGI-------------- 237
           +   K G+ ++AS ++++M++   G S   VT+N++I    ++G +              
Sbjct: 245 DSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK 304

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G + KA+A+  +M   GI+P  VT+N +I G  K E   AA  
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM + G+   V+TYNSL+N  C  G L EA+ L  ++  +GL P V+T N LI+G+C
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 341 -----------KKKLVEK------------------------ARVLFDDISEQGLSPSVI 365
                      K+++VE+                        AR  FD++  +GL P   
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNT I A         AF +R  M+ +G+ PD  TYN +I GL + GN++  + +  ++
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V++G++   +TY  L+ A C+ G  ++A  LL+ M     +   P++VTY +L+   C++
Sbjct: 545 VSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV---SDGLQPSVVTYTILVHTCCRR 601

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           G L  A G   ++L+ G+ PN+ TY ++   +   G  P    H + +
Sbjct: 602 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEM 649



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 223/429 (51%), Gaps = 21/429 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK-RAGDYGLKSSVLSCNQLLRALVK 163
           LS  + S   N +I  +L   +V+        EA +    + G+  +V++ N ++  L+K
Sbjct: 302 LSKKASSFTYNPLITALLERGFVRKA------EALQMEMENEGIMPTVVTYNAIIHGLLK 355

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             + E  +  + EM+   +  ++ ++N +LN  CKAG L +A  ++ D++  G++P V+T
Sbjct: 356 CEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLT 415

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LIDGYC+   +G + +A  + ++MVE G  P+  T+  L++G  K  N++ A + F+
Sbjct: 416 YNTLIDGYCR---LGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFD 472

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM S G+      YN+ I           A  LR+ MM  G+ P+ VT N +I+G CK  
Sbjct: 473 EMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 532

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            ++ A+ L   +   GL P  ITY  LI A+C+ G + +A  + N M+  G+ P V TY 
Sbjct: 533 NLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYT 592

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+    R GN+        ++++ G+    +TYN+L+ ALC  G++  A     EM   
Sbjct: 593 ILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEML-- 650

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            +    PN  TY +LI G C++G   DA  L  E+ + G+ P+  T+       + KGF 
Sbjct: 651 -ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHN-----ALFKGF- 703

Query: 524 PDIEGHMYN 532
              EGHMY+
Sbjct: 704 --DEGHMYH 710


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 231/462 (50%), Gaps = 24/462 (5%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           S++  G++L SLV A  Y  + S       NG  +++ T+   L  C   L  NS     
Sbjct: 68  SIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTL-SILINCFSQLGHNS----- 121

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
                       L F  F      G +   ++   L++ L  +G      + + ++    
Sbjct: 122 ------------LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALG 169

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            +LN  S+  ++NGLCK G+   A +++  +    V   VV YN +IDG CK   +   +
Sbjct: 170 FQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAF 229

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
                + +MV   I P  VT+NTLI G C    +  A+ +  +M    I   V T++ L+
Sbjct: 230 D---FYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +  C +GK+ EA  +   MM   +KPN+VT N+L+NG+C    V KA  +F+ +++ G++
Sbjct: 287 DAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVA 346

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P V +Y+ +I  +CK   +++A  +   M  + + PDV TYN LI GL + G +     +
Sbjct: 347 PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKL 406

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+ + G    ++TYN L+ ALCK+    KA+ LL    K++     P++ TYN+LI G
Sbjct: 407 IGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLT---KLKDHNIQPSVCTYNILING 463

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            C+ G+L+DA  +  ++L  G   +  TY  + +   +KGF+
Sbjct: 464 LCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 208/382 (54%), Gaps = 6/382 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+ S++++ + L+    + G       V+  + ++  E +  +   ++ GLC  G ++KA
Sbjct: 99  GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + +LG     V+Y  LI+G CK   +G+   A  + + +    +  + V +NT+
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCK---VGQTKAALEMLRRIDGKLVRLDVVMYNTI 215

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CKD+ ++ A   + EM +  I   VVTYN+LI GLC+ G+L +A+ L  +M+   +
Sbjct: 216 IDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI 275

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P V T + L++ FCK+  V++A+ +F  + ++ + P+++TYN+L++ YC    +  A +
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAES 335

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N+M   GV PDV +Y+ +I+G  +   V+    +  E+    +   +VTYN L+  LC
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC 395

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+   A+ L+ EM       + PNI+TYN L+   C+   ++ A  LL +L +  + P
Sbjct: 396 KSGRISYALKLIGEM---HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQP 452

Query: 506 NQTTYQIVREEMMEKGFIPDIE 527
           +  TY I+   + + G + D +
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQ 474



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 19/295 (6%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ + F  ++    K  + S  + +  +M  +GIA+ +VT + LIN     G    + ++
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              ++  G +P+ +T   LI G C K  + KA    D +   G   + ++Y TLI+  CK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G+ + A  M   +  + V  DV  YN +I G+ ++  V    +  +E+V   +   +VT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+  LC  G+ K A+ LL    KM  E   P + T+++L+  FC++GK+++A  +  
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLH---KMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV 303

Query: 497 ELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
            +++K + PN  TY                + +   M + G  PD+  +   ISG
Sbjct: 304 VMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 208/397 (52%), Gaps = 23/397 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     ++ N L+    + G   D   +   M  +  + ++ ++N +++G+CK G+  KA
Sbjct: 258 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 317

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I++ M     SP  VTYN LI   CK+  I     A  + + +V  G+LP+  TFNTL
Sbjct: 318 IEILQQMILRECSPNTVTYNTLISALCKENEI---EAATDLARILVSKGLLPDVCTFNTL 374

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C  +N   AM++FEEM + G      TY+ LI+ LC + +L EA+ L  EM +SG 
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N V  N LI+G CK + +E A  +FD +   G+S S +TYNTLID  CK  R+E+A  
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+  G+ PD  TYN L+    R G++E   +I+  + +NG    + TY  L+G LC
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G+   A  LL  + +M+     P+   YN +I+    + + ++   L  E++EK   P
Sbjct: 555 RAGRVDVASKLLRSV-QMKGIVLTPH--AYNPVIQALFMRKRTKEGMRLFREMMEKSDPP 611

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  T++IV                   EM+EKG +P+
Sbjct: 612 DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPE 648



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 202/367 (55%), Gaps = 6/367 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G K      N  L ALV++ K + VE ++ +M    I L++ +FN ++  LCKA +L 
Sbjct: 116 ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  ++E+M + G+ P  +T+  L+ G+ ++G +    K     K M+  G L   V+  
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMK---KQMLGYGCLLTNVSVK 232

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L++GFCK+  +  A++   E+   G +   VT+NSL+NG C  G +++A+ + D M+  
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+V T N+LI+G CK    EKA  +   +  +  SP+ +TYNTLI A CKE  +E A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   ++ +G+LPDV T+N LI GL    N +    +  E+ N G +    TY+IL+ +
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC + + K+A+ LL E   ME      N V YN LI G C+  ++EDA  + +++   G+
Sbjct: 413 LCYERRLKEALMLLKE---MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 504 IPNQTTY 510
             +  TY
Sbjct: 470 SRSSVTY 476



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 150/337 (44%), Gaps = 71/337 (21%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE--------------------- 283
            + K +  +G +PN  TF TLI  F     I   +K+ E                     
Sbjct: 76  TLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVE 135

Query: 284 ------------EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
                       +M + GI   V T+N LI  LC   +L  A+ + +EM   GLKP+ +T
Sbjct: 136 DNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEIT 195

Query: 332 SNA-----------------------------------LINGFCKKKLVEKARVLFDDIS 356
                                                 L+NGFCK+  VE+A     ++S
Sbjct: 196 FTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVS 255

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G SP  +T+N+L++ +C+ G + DA  + + M+++G  PDV TYN LI+G+ + G  E
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               I+ +++        VTYN L+ ALCK+ + + A  L   +     +   P++ T+N
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV---SKGLLPDVCTFN 372

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            LI+G C     + A  +  E+  KG  P++ TY I+
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 4/277 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +  E F+   + G K    + + L+ +L  E + ++   + KEM+      N   +N ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GLCK+ ++  A +I + M+ LGVS   VTYN LIDG CK     ++ +A  +   M+  
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNK---RVEEASQLMDQMIME 502

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P++ T+N+L+  FC+  +I  A  + + M S+G    + TY +LI GLC  G++D A
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVA 562

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L   +   G+       N +I     +K  ++   LF ++ E+   P  +T+  +   
Sbjct: 563 SKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRG 622

Query: 374 YCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            C  G  +++A      ML++G+LP+  ++  L  GL
Sbjct: 623 LCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 6/286 (2%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S    RN+++ + L+    K+ +     E F +    G+  S ++ N L+  L K  + E
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 490

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           +   +  +M    ++ +  ++N +L   C+ G + KA DI++ M S G  P + TY  LI
Sbjct: 491 EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 550

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G C+    G++  A  + + +   GI+     +N +I      +     M++F EM   
Sbjct: 551 GGLCRA---GRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK 607

Query: 289 GIAAGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
                 +T+  +  GLC   G + EA+    EM+  G+ P   +   L  G C   + + 
Sbjct: 608 SDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDT 667

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
              L + + E+       T  ++I  + K  +  DA A    +LDR
Sbjct: 668 LIELINMVMEKAQMSERET--SMIRGFLKIRKFNDALANLGGILDR 711



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 21/253 (8%)

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L+  L      D    L  ++ +SG  PN  T   LI  F     +E    + ++  E 
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--EL 117

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P    YN  ++A  ++ +++    + + M++ G++ DVST+N LI  L +   +   
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++ E+ N+G++   +T+  L+    ++G    A+ +  +M            V+  VL
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGY---GCLLTNVSVKVL 234

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           + GFC++G++E+A   + E+ E+G  P+Q T+                  + + M+EKGF
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 523 IPDIEGHMYNISG 535
            PD+  +   ISG
Sbjct: 295 DPDVYTYNSLISG 307


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 216/404 (53%), Gaps = 7/404 (1%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M AYVK        + +KR  + G+  +V+SC+ L++   + G+  +   ++ ++ +   
Sbjct: 384 MDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGF 443

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           E ++ +++ ++ G CK+G L     + EDM      P  + Y++LI+G CK+G +G   +
Sbjct: 444 EPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR 503

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
               F   V  G+ PN  T NTL+D FC+ + I  AMKV+  MG   I A  VTY  LI 
Sbjct: 504 ---FFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G    G++DEA+ L  +M+    KP+V+T   LI+G CK K       +FD + +  ++P
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            +  YN LI+ + +EG +E A  +   +++RG  PDV T+N +I        ++    + 
Sbjct: 621 DIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLF 680

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG- 481
            ++ +  +R   +T+ IL+ A C++G+   A+ +     KM +E   PN+VTY+ LI G 
Sbjct: 681 AKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFS---KMLEEGPEPNLVTYSCLIHGY 737

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           F  +  +E    L NE+LE  + PN  +Y I+ + + ++G + +
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 240/472 (50%), Gaps = 40/472 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  +VK G    V  I+  +   ++ +  N +   +L+  + +N +       F +  
Sbjct: 382 SAMDAYVKIGDLGRVIQIYKRM--LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQIL 439

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G + S+L+ + L+    K G   D  Y+Y++M ++R E +   ++ ++NGLCK G + 
Sbjct: 440 KLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVG 499

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCK-KGGIGKM----------YKADAV------ 246
            A        + G+SP V T N L+D +C+ K  +G M           KAD V      
Sbjct: 500 DALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559

Query: 247 ---------------FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                          F  M++    P+ +T+ TLIDG CK +  SA + +F+ M  + +A
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA 619

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +  YN LIN    +G L+ A+ L   ++  G KP+V T N +I  +C  K ++ A  L
Sbjct: 620 PDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG-LS 410
           F  ++ + L P+ IT+  LIDA+C+EGRM+DA  M + ML+ G  P++ TY+CLI G   
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFK 739

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW- 469
            +  +E    + NE++ N +   +V+Y+IL+  LCK G  K+A       F+   +K   
Sbjct: 740 SQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASC----AFRCALDKHLL 795

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           P+++ Y +LI+G+C+ G+L +A  L + +L   L P++   + + E  ++K 
Sbjct: 796 PDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKA 847



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 258/529 (48%), Gaps = 32/529 (6%)

Query: 4   SANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILR-YFCWSTKELRASHS 62
           SA S    +  L++N  +S+      +  I+Q F +D D +   R  FC    +L +++ 
Sbjct: 113 SAPSFCALLHVLLQNQLFSRAACVF-DKFIMQ-FGNDYDTLDAFRDGFC----DLDSTNH 166

Query: 63  LLLTGRLLHSLVVAKKYPK-IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII--- 118
            ++ G L+ S      + K +  F+H+ VK G F S + ++  L +  DS C   I+   
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVK-GIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 119 --------------IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
                          + +M  ++   +  +G    K     G    +++CN++L+ +  +
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
                 +  +  + R   + N+ +F+ +++  CK G L+KA  + + M   GV+P ++ Y
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           +ILIDG  K G   ++     +    ++ GI  + V F++ +D + K  ++   +++++ 
Sbjct: 346 SILIDGLFKAG---RLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKR 402

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M + GI+  VV+ + LI G C +G++ EA  L  +++  G +P+++T +ALI GFCK   
Sbjct: 403 MLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGN 462

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +     L++D+ ++   P  I Y+ LI+  CK+G + DA       ++RG+ P+V T N 
Sbjct: 463 LRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNT 522

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+    R   + G   +   +    ++A  VTY IL+    + G+  +A+ L    F+M 
Sbjct: 523 LLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF---FQML 579

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           K+   P+++TY  LI G C+  K      + + + +  + P+   Y ++
Sbjct: 580 KKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVL 628



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 15/221 (6%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL--SPSVI--T 366
           D   A RD         + V    LI  +C+K + +K+  +F  +  +G+  SP+V+   
Sbjct: 149 DTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLL 208

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
             +LID++C E  ++    + ++M ++      S Y  ++     +G VE        LV
Sbjct: 209 LGSLIDSHCVEVIVDKYGELCSAMREQ----PFSVYEFVMNRFMNKGEVEMGLRFHKALV 264

Query: 427 NNGMRAGLVTYN-ILVGALCKDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQ 484
             G    ++T N IL G   ++      + + D+ F M  +    PN+VT++ LI  +C+
Sbjct: 265 QGGFGLDIITCNKILKGIWMQND-----IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCK 319

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +G L+ A  L + +   G+ P+   Y I+ + + + G + D
Sbjct: 320 EGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLED 360


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 219/399 (54%), Gaps = 6/399 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++ ++L+    KN +     E        GL +S ++   L+  L K  +FE    V 
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM          + + ++ GL + GK+  A D++  +K +G  P +  YN LI+  CK 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   K  +A+ +FK+M E G+  N+VT++ LID FC+   +  A+    +M   GI   V
Sbjct: 380 G---KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             YNSLING C  G L  AV+  DEM+  GLKP VV+  +LI+G+C K  + +A  L+ +
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G++P+  T+ TLI A  +  RM DAF + + ML++ ++P+  TYN +I G  +EGN
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                 ++N++V  G+     TY  L+ +LC  G+  +A   +D+   + +E    N + 
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD---LHREHFKLNEMC 613

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           Y+ L+ G+C++G+L DA G+  E++++G+  +   Y ++
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVL 652



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 215/438 (49%), Gaps = 35/438 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L   K  +  +G        + G   +  + + L+  L ++GK  D   +   +K+  
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              +L  +N ++N LCK GK ++A  + ++M   G+    VTY+ILID +C++G   K+ 
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRG---KLD 418

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A      M+  GI      +N+LI+G CK  N+SAA+  F+EM   G+   VV+Y SLI
Sbjct: 419 TAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLI 478

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GKL EA  L  EM   G+ PN  T   LI+   +   +  A  LFD++ EQ + 
Sbjct: 479 SGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMM 538

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN +I+ +CKEG    AF + N M+ +G++PD  TY  LI+ L   G V   +  
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------------- 462
           +++L     +   + Y+ L+   CK+G+ + A+ +  EM K                   
Sbjct: 599 IDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK 658

Query: 463 -------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
                        M  ++  P+ V Y  +I G+ + G ++ A G+ + ++++G  PN  T
Sbjct: 659 EQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVT 718

Query: 510 YQIVREEMMEKGFIPDIE 527
           Y  +  E+ + G +   E
Sbjct: 719 YTTLINELCKAGLMDKAE 736



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 218/479 (45%), Gaps = 85/479 (17%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK  G+ GL ++ ++ + L+ +  + GK +   +   +M    I++ +  +N ++NG CK
Sbjct: 389 FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L+ A    ++M   G+ P VV+Y  LI GYC KG   K+++A  ++ +M   GI PN
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKG---KLHEAFRLYHEMTGKGIAPN 505

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             TF TLI    +   ++ A ++F+EM    +    VTYN +I G C +G   +A  L +
Sbjct: 506 TYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLN 565

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M+  GL P+  T   LI+  C    V +A+   DD+  +    + + Y+ L+  YCKEG
Sbjct: 566 QMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625

Query: 379 RMEDAFAMRNSMLDRGV-----------------------------------LPDVSTYN 403
           R+ DA  +   M+ RGV                                    PD   Y 
Sbjct: 626 RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYT 685

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-- 461
            +I G S+ G+V+    I + +++ G    +VTY  L+  LCK G   KA  L  EM   
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVS 745

Query: 462 --------------------KMEKEKKW---------PNIVTYNVLIKGFCQKGKLEDAN 492
                                MEK  +           N V+YN+L++GFC+ G++E+A 
Sbjct: 746 NSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEAT 805

Query: 493 GLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
            LL+E+++  + P+  TY  +                 + M+ KG  PD   + + I G
Sbjct: 806 KLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYG 864



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 58/442 (13%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D GLK +V+S   L+     +GK  +   +Y EM  + I  N  +F  +++ L +
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A ++  A  + ++M    + P  VTYN++I+G+CK+G   K ++   +   MV+ G++P+
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE---LLNQMVQKGLVPD 575

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+  LI   C    +  A K  +++         + Y++L++G C +G+L +A+ +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 319 EMMASG-----------------------------------LKPNVVTSNALINGFCKKK 343
           EM+  G                                   L+P+ V   ++I+G+ K  
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            V+KA  ++D + ++G +P+++TY TLI+  CK G M+ A  +   ML     P+  TY 
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           C +  L+REG++E    + N+++  G+ A  V+YNILV   CK G+ ++A  LLDEM   
Sbjct: 756 CFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMID- 813

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------- 512
                +P+ +TY+ +I   C++G L+ A    + +L KGL P+   Y             
Sbjct: 814 --NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 513 -----VREEMMEKGFIPDIEGH 529
                +R++M+ +G  P+   H
Sbjct: 872 GKAFELRDDMIRRGVKPNQATH 893



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 243/497 (48%), Gaps = 28/497 (5%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           LR+F +       +HS +    L+H+LV A  +    S L   +  G       +F AL 
Sbjct: 89  LRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDP-REVFEALL 147

Query: 107 TCSDSLCR--NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            C +  C   +S+  D+L+ +YV+  +       F+      L   V +  ++L  L K 
Sbjct: 148 DCFEK-CDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKI 206

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            + + V  ++ E+    I  ++  +  V+   C+     KA ++++ M+S  ++  VV Y
Sbjct: 207 RRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVY 264

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N+LI G CK     ++++A  +   +++ G+  +EVT+ TL+ G CK +       V +E
Sbjct: 265 NVLIHGLCKN---KRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDE 321

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G        +SL+ GL   GK+ +A  L + +   G  P++   NALIN  CK   
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            ++A +LF ++ E+GL  + +TY+ LID++C+ G+++ A      M+  G+   V  YN 
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI G  + GN+    +  +E+++ G++  +V+Y  L+   C  GK  +A  L  E   M 
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE---MT 498

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------- 515
            +   PN  T+  LI    +  ++ DA  L +E+LE+ ++PN+ TY ++ E         
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 516 -------EMMEKGFIPD 525
                  +M++KG +PD
Sbjct: 559 KAFELLNQMVQKGLVPD 575



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 204/421 (48%), Gaps = 12/421 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL H +      P   +F   +    +  + T    +F  +     ++  N +  ++++ 
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM--LEQNMMPNEVTYNVMIE 549

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + K       FE   +    GL     +   L+ +L   G+  + +    ++ R   +L
Sbjct: 550 GHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL 609

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   ++ +L+G CK G+L  A  +  +M   GV   +V Y +LIDG  K+     ++   
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF--- 666

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + K+M +  + P++V + ++IDG+ K  ++  A  +++ M   G    +VTY +LIN L
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G +D+A  L  EM+ S   PN VT    ++   ++  +EKA  L +D+  +GL  + 
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANT 785

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ++YN L+  +CK GR+E+A  + + M+D  + PD  TY+ +I    R GN++G     + 
Sbjct: 786 VSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDT 845

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++N G++   + YN L+   C  G+  KA  L D+M +   +   PN  T+  L  G  +
Sbjct: 846 MLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVK---PNQATHKSLSHGASR 902

Query: 485 K 485
           K
Sbjct: 903 K 903



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 158/305 (51%), Gaps = 12/305 (3%)

Query: 115 NSIIIDMLMLAYVK--NMKPHLGF--EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           N +    L+  Y K   ++  LG   E  KR  D  L    +    L+   +KE     V
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAV----LIDGTIKEQDTSAV 665

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             + K M  +R+  +   +  +++G  KAG + KA  I + M   G +P +VTY  LI+ 
Sbjct: 666 FGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINE 725

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            CK G    M KA+ ++K+M+ +   PN VT+   +D   ++ ++  A+++  +M   G+
Sbjct: 726 LCKAG---LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGL 781

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
            A  V+YN L+ G C  G+++EA  L DEM+ + + P+ +T + +I   C++  ++ A  
Sbjct: 782 LANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIE 841

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            +D +  +GL P  + YN LI   C  G +  AF +R+ M+ RGV P+ +T+  L  G S
Sbjct: 842 FWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGAS 901

Query: 411 REGNV 415
           R+ ++
Sbjct: 902 RKFSI 906



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 3/132 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL ++ +S N L+R   K G+ E+   +  EM    I  +  +++ ++   C+ G L+ A
Sbjct: 780 GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGA 839

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +  + M + G+ P  + YN LI G C  G +GK ++   +  DM+  G+ PN+ T  +L
Sbjct: 840 IEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE---LRDDMIRRGVKPNQATHKSL 896

Query: 266 IDGFCKDENISA 277
             G  +  +IS 
Sbjct: 897 SHGASRKFSIST 908


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   + + + +S L + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P  V+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G  K+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGVLDEGFRLKSA---MLASGVQPDVYTYSVLINGLSKESKMDDADELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L DD+S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G+     TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+    V+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING  K+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++++ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 RKGLKPDKITYTTLIDGCCKEGD-------LDSAFEHRKRMIQENIRLDDVVYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 401



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSAVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +   +    ++   M + G+   V TY+ LINGL  + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +      P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLN---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 49/263 (18%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC      EA +L   +++   K    +++A+     + K  +++       
Sbjct: 21  SYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKG---SASAVFAAILETKGTQRS------- 70

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
                   +  ++ LI AY + G + DA        +  +     T   ++  L +    
Sbjct: 71  -------DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYF 123

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNI 472
           + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P+ 
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRPSA 177

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREE 516
           V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + +E
Sbjct: 178 VSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDE 237

Query: 517 MMEKGFIPD-------IEGHMYN 532
           M+ KG +P+       I+GH  N
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKN 260


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 228/438 (52%), Gaps = 18/438 (4%)

Query: 73  LVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLMLAYV 127
           ++ ++  P I  F   L    K+  +  V ++FH +  C     L   +I+I+ L     
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL----C 56

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           +  +  +      +   +G +  V++ + L+    +  +  D   +  +M+      ++ 
Sbjct: 57  RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 116

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +N +++G CK G +N A ++ + M+  GV    VTYN L+ G C  G   +   A  + 
Sbjct: 117 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG---RWSDAARLM 173

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           +DMV   I+PN +TF  +ID F K+   S AMK++EEM    +   V TYNSLINGLC+ 
Sbjct: 174 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 233

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++DEA  + D M+  G  P+VVT N LINGFCK K V++   LF +++++GL    ITY
Sbjct: 234 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 293

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT+I  Y + GR + A  + + M  R   P++ TY+ L+ GL     VE    +   +  
Sbjct: 294 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 350

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           + +   + TYNI++  +CK G  + A  L   +     +   P++V+Y  +I GFC+K +
Sbjct: 351 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL---SCKGLKPDVVSYTTMISGFCRKRQ 407

Query: 488 LEDANGLLNELLEKGLIP 505
            + ++ L  ++ E GL+P
Sbjct: 408 WDKSDLLYRKMQEDGLLP 425



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 206/393 (52%), Gaps = 38/393 (9%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  +++L  + K   ++ V  ++  M+   I  +L S+N V+N LC+  +   A  ++
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M   G  P VVT + LI+G+C+     +++ A  +   M E G  P+ V +NT+IDG 
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGN---RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   ++ A+++F+ M   G+ A  VTYNSL+ GLC  G+  +A  L  +M+   + PNV
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T  A+I+ F K+    +A  L+++++ + + P V TYN+LI+  C  GR+++A  M + 
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM------------------- 430
           M+ +G LPDV TYN LI G  +   V+    +  E+   G+                   
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 431 -------------RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
                        R  + TY+IL+  LC + + +KA+ L + M K E E    +I TYN+
Sbjct: 306 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL---DITTYNI 362

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +I G C+ G +EDA  L   L  KGL P+  +Y
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 395



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 143/261 (54%), Gaps = 3/261 (1%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+++  LP+ V F+ ++    K +N    + +F  M   GI   + +YN +IN LC   +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
              A+++  +MM  G +P+VVT ++LINGFC+   V  A  L   + E G  P V+ YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID  CK G + DA  + + M   GV  D  TYN L+AGL   G       +M ++V   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   ++T+  ++    K+GK  +A+ L +EM +   +   P++ TYN LI G C  G+++
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD---PDVFTYNSLINGLCMHGRVD 237

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  +L+ ++ KG +P+  TY
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTY 258


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 233/443 (52%), Gaps = 7/443 (1%)

Query: 82  IRSFLHMFVKNGKFT-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           +RSF+  + +  +F  +V  + + L   +  +  ++++ + L+   V+  K  L    + 
Sbjct: 127 VRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYN 186

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                G++  V++ N L++AL +  +      + +EM    +  +  +F  ++ G  + G
Sbjct: 187 EMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEG 246

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            +  A  +   M   G SP  VT N+LI+GYCK   +G++  A    +  + +G  P++V
Sbjct: 247 SIEAALRVKAKMMEAGCSPTGVTVNVLINGYCK---MGRVEDALGYIQQEIADGFEPDQV 303

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+NT + G C++ ++S A+KV + M   G    V TYN++IN L  +G+LDEA  + ++M
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G  P+  T N LI     +  +E+A  L  +++ +GLSP V T+N LI+A CK G  
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 423

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
                +   M   G  PD  TYN LI  L   G +    +++NE+ +NG     VTYN +
Sbjct: 424 HLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + ALCK  + ++A  + D+   M+ +    + VT+N LI G C+  +++DA  L+ ++++
Sbjct: 484 IDALCKKMRIEEAEEVFDQ---MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 540

Query: 501 KGLIPNQTTYQIVREEMMEKGFI 523
           +GL PN  TY  +     ++G I
Sbjct: 541 EGLQPNNITYNSILTHYCKQGNI 563



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 198/365 (54%), Gaps = 9/365 (2%)

Query: 166 KFED-VEYVYKEMKRRRIELNLDS--FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           +F+D V+ V  ++      +  D+  FN +LN L +  KL     +  +M   G+ P VV
Sbjct: 139 RFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVV 198

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           T N LI   C+     ++  A  + ++M  +G+ P+E TF TL+ GF ++ +I AA++V 
Sbjct: 199 TLNTLIKALCRAH---QVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVK 255

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            +M   G +   VT N LING C  G++++A+    + +A G +P+ VT N  ++G C+ 
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQN 315

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V  A  + D + ++G  P V TYNT+I+   K G +++A  + N M+DRG LPD +T+
Sbjct: 316 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 375

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N LI  LS +  +E   ++  EL   G+   + T+NIL+ ALCK G     + L +E   
Sbjct: 376 NTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE--- 432

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M+     P+ VTYN+LI   C  GKL +A  LLNE+   G   +  TY  + + + +K  
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492

Query: 523 IPDIE 527
           I + E
Sbjct: 493 IEEAE 497



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 223/457 (48%), Gaps = 60/457 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRR 180
           LM  +++            +  + G   + ++ N L+    K G+ ED + Y+ +E+   
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             E +  ++N  ++GLC+ G ++ A  +M+ M   G  P V TYN +I+   K G   ++
Sbjct: 298 -FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNG---EL 353

Query: 241 YKADAVFKDMVENGILPNEVTFNTLI---------------------------------- 266
            +A  +   MV+ G LP+  TFNTLI                                  
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413

Query: 267 -DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +  CK  +    +++FEEM S G     VTYN LI+ LC  GKL  A+ L +EM ++G 
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGC 473

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + VT N +I+  CKK  +E+A  +FD +  QG+S S +T+NTLID  CK  R++DA  
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  G+ P+  TYN ++    ++GN++   +I+  +  NG    +VTY  L+  LC
Sbjct: 534 LIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLC 593

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+++ A+ LL  M +++  +  P    YN +I+   ++  L DA  L  E+ E G  P
Sbjct: 594 KAGRTQVALKLLRGM-RIKGIRPTPK--AYNPVIQSLFRRNNLRDALNLFREMTEVGEPP 650

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  TY+IV                   EM+ KGF+P+
Sbjct: 651 DALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 4/291 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+ A  K   PHLG   F+     G     ++ N L+  L   GK  +   +  EM+ 
Sbjct: 411 NILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMES 470

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                +  ++N +++ LCK  ++ +A ++ + M + G+S   VT+N LIDG CK   I  
Sbjct: 471 NGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDD 530

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  + + MV+ G+ PN +T+N+++  +CK  NI  A  + E M ++G    VVTY +
Sbjct: 531 ---ATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LINGLC  G+   A+ L   M   G++P     N +I    ++  +  A  LF +++E G
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647

Query: 360 LSPSVITYNTLIDAYCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             P  +TY  +  + C+ G  +++AF     M+++G +P+ S++  L  GL
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 22/261 (8%)

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS---GLKPNVVTSNALINGFC 340
           EM   G     V   S +       + D+AV L    + +   G++ + V  N L+N   
Sbjct: 114 EMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV 173

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           +   ++    ++++++ +G+ P V+T NTLI A C+  ++  A  M   M   GV PD +
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           T+  L+ G   EG++E    +  +++  G     VT N+L+   CK G+ + A+  + + 
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------- 513
                E   P+ VTYN  + G CQ G +  A  +++ +L++G  P+  TY  V       
Sbjct: 294 IADGFE---PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350

Query: 514 ---------REEMMEKGFIPD 525
                      +M+++G +PD
Sbjct: 351 GELDEAKGIVNQMVDRGCLPD 371



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 4/232 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+   R+++  + ++ A  K M+     E F +    G+  S ++ N L+  L K  + +
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           D   + ++M +  ++ N  ++N +L   CK G + KA+DI+E M + G    VVTY  LI
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           +G CK    G+   A  + + M   GI P    +N +I    +  N+  A+ +F EM   
Sbjct: 590 NGLCKA---GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV 646

Query: 289 GIAAGVVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           G     +TY  +   LC   G + EA     EM+  G  P   +   L  G 
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 222/440 (50%), Gaps = 47/440 (10%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++C  ++I ++L    +           +K    +G    V++ + ++  L K G+   
Sbjct: 90  DTVCYTALIRELLQTGKIPQAS-----SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 144

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++K M+ R +  N   ++ +++GLCKA K++ A +++  MK    +P  +TYN+LID
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLID 204

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA-MKVFEEMGSH 288
           G CK G +     A A F +M+E G  P+  T+N LI GFCK  N  AA   + +E   +
Sbjct: 205 GLCKSGDV---EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G    + TY ++++ L  + K++EAVAL +++ A+G  P + T NAL+NG CK   +E+A
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF------AMRNSMLD---------- 392
             L   I + G +P V+TY +LID   KE R  +A+      A+R   LD          
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 393 -------------------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
                               G +PDV T + +I GLS+ G +     I   +   G+   
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            V Y+ L+  LC   K++K    L+ + +M+K    P+ +TYN+LI G C+ G +E A  
Sbjct: 442 EVVYSALIHGLC---KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 498

Query: 494 LLNELLEKGLIPNQTTYQIV 513
             +E+LE G  P+  TY I+
Sbjct: 499 FFDEMLEAGCKPDVYTYNIL 518



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 190/346 (54%), Gaps = 7/346 (2%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K E+   + +++        + ++N +LNGLCK G+L +A D++  +   G +P VVTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LIDG  K+    + ++A  +FK+M   G+  + V +  LI    +   I  A  V++ M
Sbjct: 61  SLIDGLGKE---KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            SHG    VVT +++I+GL   G++  AV +   M A GL PN V  +ALI+G CK + +
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           + A  +   + +   +P  ITYN LID  CK G +E A A  + ML+ G  PDV TYN L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 406 IAGLSREGNVEGV-RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           I+G  + GN +    ++  E   NG    + TY  +V  L K+ K ++AV+L++   K+ 
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME---KIT 294

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                P I TYN L+ G C+ G+LE+A  LL ++++ G  P+  TY
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 340



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 194/404 (48%), Gaps = 42/404 (10%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V++   L+  L KE +  +   ++KEM  R + L+   +  ++  L + GK+ 
Sbjct: 49  DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 108

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS + + M S G  P VVT + +IDG  K G IG   +   +FK M   G+ PNEV ++
Sbjct: 109 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR---IFKSMEARGLAPNEVVYS 165

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G CK   +  A+++  +M         +TYN LI+GLC  G ++ A A  DEM+ +
Sbjct: 166 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEA 225

Query: 324 GLKPNVVTSNALINGFCKK------------------------------------KLVEK 347
           G KP+V T N LI+GFCK                                     K +E+
Sbjct: 226 GCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEE 285

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L + I+  G +P++ TYN L++  CK GR+E+A  +   ++D G  PDV TY  LI 
Sbjct: 286 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 345

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL +E        +  E+   G+    V Y  L+  L + GK  +A S+      M    
Sbjct: 346 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK---TMTSHG 402

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
             P++VT + +I G  + G++  A  +   +  +GL PN+  Y 
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 446



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 235/513 (45%), Gaps = 57/513 (11%)

Query: 35  QLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK------YPKIRSFLHM 88
           +LF   A   L L   C+ T  +R    LL TG++  +  V K        P + +   M
Sbjct: 77  KLFKEMALRGLALDTVCY-TALIR---ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 132

Query: 89  ---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
                K G+  +   IF ++   +  L  N ++   L+    K  K     E   +    
Sbjct: 133 IDGLSKAGRIGAAVRIFKSME--ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG----- 200
                 ++ N L+  L K G  E     + EM     + ++ ++N +++G CKAG     
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250

Query: 201 -------------------------------KLNKASDIMEDMKSLGVSPKVVTYNILID 229
                                          K+ +A  +ME + + G +P + TYN L++
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK   +G++ +A  + + +V+NG  P+ VT+ +LIDG  K++    A K+F+EM   G
Sbjct: 311 GLCK---MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 367

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +A   V Y +LI  L   GK+ +A ++   M + G  P+VVT + +I+G  K   +  A 
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F  +  +GL+P+ + Y+ LI   CK  +M+ A  M   M      PD  TYN LI GL
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G+VE  R   +E++  G +  + TYNIL+   CK G +  A  + D+   M   +  
Sbjct: 488 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD---MSSSRCS 544

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            N+VTY  LI G C++ +L  A+     + E+G
Sbjct: 545 ANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%)

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E    +M ++  NG    + TYN L+  LCK G+ ++A+ LL    K+      P++VT
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR---KIVDNGCTPDVVT 58

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           Y  LI G  ++ +  +A  L  E+  +GL  +   Y  +  E+++ G IP
Sbjct: 59  YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 108


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/519 (29%), Positives = 255/519 (49%), Gaps = 28/519 (5%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L  +  DP L LR+F +        HS      L+H+LV A  +    S   +     + 
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASS--LLQTLLLRA 134

Query: 96  TSVSTIFHALSTCSDSLCR--NSIIIDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVL 152
              S +F+ L +C +  C+  +S   D+L+  YV++ +   G   FK       L   V 
Sbjct: 135 LKPSDVFNVLFSCYEK-CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVR 193

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           + + LL  LVK   F     ++ +M    I  ++  +  V+  LC+   L++A +++  M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           ++ G    +V YN+LIDG CKK    K+++A  + KD+    + P+ VT+ TL+ G CK 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQ---KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +     +++ +EM     +      +SL+ GL   GK++EA+ L   ++  G+ PN+   
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           NALI+  CK +   +A +LFD + + GL P+ +TY+ LID +C+ G+++ A +    M+D
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G+   V  YN LI G  + G++      M E++N  +   +VTY  L+G  C  GK  K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A+ L  EM     +   P+I T+  L+ G  + G + DA  L NE+ E  + PN+ TY +
Sbjct: 491 ALRLYHEM---TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 513 VRE----------------EMMEKGFIPDIEGHMYNISG 535
           + E                EM EKG +PD   +   I G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 206/408 (50%), Gaps = 41/408 (10%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+  L K GK E+   + K +    +  NL  +N +++ LCK  K ++A  + + M  
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P  VTY+ILID +C++G   K+  A +   +MV+ G+  +   +N+LI+G CK  +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRG---KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           ISAA     EM +  +   VVTY SL+ G C  GK+++A+ L  EM   G+ P++ T   
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G  +  L+  A  LF++++E  + P+ +TYN +I+ YC+EG M  AF     M ++G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572

Query: 395 VLPDVSTY--------------------------NC---------LIAGLSREGNVEGVR 419
           ++PD  +Y                          NC         L+ G  REG +E   
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++  E+V  G+   LV Y +L+    K    K    LL EM     +   P+ V Y  +I
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK---PDDVIYTSMI 689

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               + G  ++A G+ + ++ +G +PN+ TY  V   + + GF+ + E
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 212/458 (46%), Gaps = 55/458 (12%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI+IDM    + +  K            D GLK SV   N L+    K G     E    
Sbjct: 406 SILIDM----FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM  +++E  + ++  ++ G C  GK+NKA  +  +M   G++P + T+  L+ G  + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            I    K   +F +M E  + PN VT+N +I+G+C++ ++S A +  +EM   GI     
Sbjct: 522 LIRDAVK---LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y  LI+GLC+ G+  EA    D +     + N +    L++GFC++  +E+A  +  ++
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            ++G+   ++ Y  LID   K    +  F +   M DRG+ PD   Y  +I   S+ G+ 
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------------- 460
           +    I + ++N G     VTY  ++  LCK G   +A  L  +M               
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758

Query: 461 --------FKMEKEKKWPNIV---------TYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
                     M+K  +  N +         TYN+LI+GFC++G++E+A+ L+  ++  G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818

Query: 504 IPNQTTYQIVREE----------------MMEKGFIPD 525
            P+  TY  +  E                M EKG  PD
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 197/421 (46%), Gaps = 37/421 (8%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM  Y    K +     +      G+  S+ +   LL  L + G   D   ++ EM    
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---- 237
           ++ N  ++N ++ G C+ G ++KA + +++M   G+ P   +Y  LI G C  G      
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       GK+ +A +V ++MV+ G+  + V +  LIDG 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K ++      + +EM   G+    V Y S+I+     G   EA  + D M+  G  PN 
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK-EGRMEDAFAMRN 388
           VT  A+ING CK   V +A VL   +      P+ +TY   +D   K E  M+ A  + N
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           ++L +G+L + +TYN LI G  R+G +E    ++  ++ +G+    +TY  ++  LC+  
Sbjct: 778 AIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             KKA+ L + M   EK  + P+ V YN LI G C  G++  A  L NE+L +GLIPN  
Sbjct: 837 DVKKAIELWNSM--TEKGIR-PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893

Query: 509 T 509
           T
Sbjct: 894 T 894



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 216/487 (44%), Gaps = 80/487 (16%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +  L+   VK     L  E F      G++  V     ++R+L +       + +   M+
Sbjct: 195 LSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
               ++N+  +N +++GLCK  K+ +A  I +D+    + P VVTY  L+ G CK     
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          GK+ +A  + K +V+ G+ PN   +N LI
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D  CK      A  +F+ MG  G+    VTY+ LI+  C  GKLD A++   EM+ +GLK
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +V   N+LING CK   +  A     ++  + L P+V+TY +L+  YC +G++  A  +
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M  +G+ P + T+  L++GL R G +     + NE+    ++   VTYN+++   C+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 447 DGKSKKAVSLLDEMFK--------------------------------MEKEKKWPNIVT 474
           +G   KA   L EM +                                + K     N + 
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMM 518
           Y  L+ GFC++GKLE+A  +  E++++G+  +   Y ++ +                EM 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674

Query: 519 EKGFIPD 525
           ++G  PD
Sbjct: 675 DRGLKPD 681



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 8/398 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL H +      P I +F   L    + G       +F+ ++  +  +  N +  ++++ 
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN--VKPNRVTYNVMIE 550

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +       FE  K   + G+     S   L+  L   G+  + +     + +   EL
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   +  +L+G C+ GKL +A  + ++M   GV   +V Y +LIDG  K       +   
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF--- 667

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + K+M + G+ P++V + ++ID   K  +   A  +++ M + G     VTY ++INGL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G ++EA  L  +M      PN VT    ++   K ++  +  V   +   +GL  + 
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYN LI  +C++GR+E+A  +   M+  GV PD  TY  +I  L R  +V+    + N 
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           +   G+R   V YN L+   C  G+  KA  L +EM +
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 146/325 (44%), Gaps = 28/325 (8%)

Query: 61  HSLLLTGRLLHSLVVAKKYPK---------IRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
           H L LTG+   + V      K             LH F + GK         ALS C + 
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE------EALSVCQEM 638

Query: 112 LCRNSIIIDMLMLAY-------VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           + R    +D+ ++ Y       +K+    L F   K   D GLK   +    ++ A  K 
Sbjct: 639 VQRG---VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G F++   ++  M       N  ++  V+NGLCKAG +N+A  +   M+ +   P  VTY
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
              +D   K  G   M KA     + +  G+L N  T+N LI GFC+   I  A ++   
Sbjct: 756 GCFLDILTK--GEVDMQKA-VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G++   +TY ++IN LC    + +A+ L + M   G++P+ V  N LI+G C    
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872

Query: 345 VEKARVLFDDISEQGLSPSVITYNT 369
           + KA  L +++  QGL P+  T  T
Sbjct: 873 MGKATELRNEMLRQGLIPNNKTSRT 897


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 215/411 (52%), Gaps = 43/411 (10%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    K+G+  D E + + M  R I+ N+ S+N +L GLCK  + ++A +++ DM S
Sbjct: 14  NALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMIS 73

Query: 215 LG--VSPKVVTYNILIDGYCKKGG-----------IGKMYKADAVF-------------- 247
            G   +P +VTY+ L+ GYCK G            I +  + DA+               
Sbjct: 74  RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARL 133

Query: 248 -------KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
                  ++M+  G  P  +TFNTLI G C+++N+  A  + + M + G+ A VVTYN+L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTL 193

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++GLC  G+L EA  L + M ASG  P+VV  ++ + G CK   V  A  + + + +   
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDH 253

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVR 419
            P+V+TYNT++D  CK G+++ A  M   M    G   +V  Y+ ++ GL + G  +  R
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++M  +   G R  +VTY+ LV  LCK GK ++AV  + EM  ME  K  PN VTY  L+
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AMEGCK--PNAVTYCSLV 370

Query: 480 KGFCQKGKLEDANGLLNELLEKGLI-----PNQTTYQIVREEMMEKGFIPD 525
            G C  G+L +A  ++ E+   G       P+ +TY  +   + + G I D
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 191/369 (51%), Gaps = 38/369 (10%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R     N  +FN ++NG  K G+      ++E M + G+ P VV+YN L++G CK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCK--- 57

Query: 237 IGKMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           + + ++A+ + +DM+  G    P+ VT++TL+ G+CK   +  + ++ +E+ S G+    
Sbjct: 58  LERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           + Y  ++  LC   +L EA+ L +EM+ +G  P ++T N LI+G C++K +E A  L   
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++  G+   V+TYNTL+D  CK GR+++A  +   M   G  PDV  Y+  + GL + G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------ 462
           V     ++ ++ ++     +VTYN ++  LCK GK   A+ ++++M              
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 463 ---------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
                                M +    P++VTY+ L+ G C+ GK+E+A   + E+  +
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 502 GLIPNQTTY 510
           G  PN  TY
Sbjct: 358 GCKPNAVTY 366



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 175/314 (55%), Gaps = 9/314 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ N L+    +E   E  + + + M    ++ ++ ++N +++GLCKAG+L +A
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E MK+ G +P VV Y+  + G CK    GK+  A  V + M ++   PN VT+NT+
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKS---GKVLNAHQVLEQMRDSDHDPNVVTYNTI 263

Query: 266 IDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +DG CK   I  A+++ E+M S  G    VV Y+++++GLC  G+  EA ++ + M  +G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +P+VVT ++L+NG CK   +E+A     +++ +G  P+ +TY +L+   C  GR+ +A 
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383

Query: 385 AMRNSMLDRGVL-----PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            M   M   G       P VSTYN LI GL + G ++        + + G     V+Y+ 
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443

Query: 440 LVGALCKDGKSKKA 453
           +V  L + G++ +A
Sbjct: 444 IVEGLARSGRALQA 457



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 12/377 (3%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +    L+  Y K  K     E  K     GL+   L   +++ +L K  +  +   + +E
Sbjct: 83  VTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEE 142

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R      L +FN +++G C+   L  A  +++ M + GV   VVTYN L+DG CK   
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKA-- 200

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            G++ +A+ + + M  +G  P+ V +++ + G CK   +  A +V E+M        VVT
Sbjct: 201 -GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVT 259

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           YN++++GLC  GK+D A+ + ++M +S G   NVV  + +++G CK    ++AR + + +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           +  G  P V+TY++L++  CK G++E+A      M   G  P+  TY  L+ GL   G +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379

Query: 416 EGVRNIMNEL-----VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
                ++ E+       +     + TYN L+G LCK G+   A+       +M  +   P
Sbjct: 380 AEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ---RMRSQGCDP 436

Query: 471 NIVTYNVLIKGFCQKGK 487
           + V+Y+ +++G  + G+
Sbjct: 437 DGVSYSTIVEGLARSGR 453



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +G  PN VT NAL+NGF K+        L + ++ +G+ P+V++YN L++  CK  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 380 MEDAFAMRNSMLDRG--VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
             +A  +   M+ RG    PD+ TY+ L++G  + G VE  R ++ E+++ G+R   + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             ++ +LCK  +  +A+ LL+EM +       P ++T+N LI G C++  LE A+ LL  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRA---GCCPTLITFNTLISGCCREKNLEMADSLLQT 177

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +   G+  +  TY  + + + + G + + E
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAE 207


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 206/369 (55%), Gaps = 6/369 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+R L   G+  +   V  EM RRR   ++ ++  +L   CK     +A  ++++M+ 
Sbjct: 36  NTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 95

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P +VTYN++++G C++G   ++  A    K++   G  PN V++N ++ G C  E 
Sbjct: 96  KGCTPDIVTYNVVVNGICQEG---RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A ++  EMG  G    VVT+N LI+ LC  G ++ A+ + +++   G  PN ++ N 
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+K ++KA    D +  +G  P +++YNTL+ A C+ G ++ A  + + + D+G
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P + +YN +I GL++ G  +    ++NE+V+ G++  ++TY+ +   LC++ + + A+
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                  K++     PN V YN +I G C++ +   A  L   ++  G +PN++TY I+ 
Sbjct: 333 RAFG---KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 515 EEMMEKGFI 523
           E +  +G I
Sbjct: 390 EGLAYEGLI 398



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 200/359 (55%), Gaps = 9/359 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++      G+ +    +  EM    +E +  ++N ++ GLC  G+   A  ++++M  
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               P VVTY IL++  CK+ G  +  K   +  +M + G  P+ VT+N +++G C++  
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMK---LLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A++  + + S+G     V+YN ++ GLC   + ++A  L  EM   G  PNVVT N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+  C+K LVE A  + + I + G +P+ ++YN L+ A+CK+ +M+ A A  + M+ RG
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD+ +YN L+  L R G V+    ++++L + G    L++YN ++  L K GK+K+A+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            LL+EM     +   P+I+TY+ +  G C++ ++EDA     ++ + G+ PN   Y  +
Sbjct: 298 ELLNEMV---SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++   LL A  K   ++    +  EM+ +    ++ ++N V+NG+C+ G+++ A + ++
Sbjct: 67  VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK 126

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           ++ S G  P  V+YNI++ G C      +   A+ +  +M + G  PN VTFN LI   C
Sbjct: 127 NLPSYGCEPNTVSYNIVLKGLCTAE---RWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 183

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   +  A++V E++  +G     ++YN L++  C   K+D+A+A  D M++ G  P++V
Sbjct: 184 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 243

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           + N L+   C+   V+ A  L   + ++G +P +I+YNT+ID   K G+ ++A  + N M
Sbjct: 244 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G+ PD+ TY+ + AGL RE  +E       ++ + G+R   V YN ++  LCK  ++
Sbjct: 304 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             A+ L   M         PN  TY +LI+G   +G +++A  LL+EL  + 
Sbjct: 364 HSAIDLFAYMI---GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 186/339 (54%), Gaps = 11/339 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++ G C AG+L+ A  ++ +M    V P   TYN LI G C   G G+   A AV 
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLC---GRGRTANALAVL 55

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M+    +P+ VT+  L++  CK      AMK+ +EM   G    +VTYN ++NG+C +
Sbjct: 56  DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 115

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++D+A+     + + G +PN V+ N ++ G C  +  E A  L  ++ ++G  P+V+T+
Sbjct: 116 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 175

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI   C++G +E A  +   +   G  P+  +YN L+    ++  ++     ++ +V+
Sbjct: 176 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKG 486
            G    +V+YN L+ ALC+ G+   AV LL ++    K+K   P +++YN +I G  + G
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL----KDKGCAPVLISYNTVIDGLTKAG 291

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           K ++A  LLNE++ KGL P+  TY  +   +  +  I D
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 330



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    +++ N ++  + +EG+ +D     K +     E N  S+N VL GLC A +  
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++M +M   G  P VVT+N+LI   C+KG +     A  V + + + G  PN +++N
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYN 211

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+  FCK + +  AM   + M S G    +V+YN+L+  LC  G++D AV L  ++   
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P +++ N +I+G  K    ++A  L +++  +GL P +ITY+T+    C+E R+EDA
Sbjct: 272 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 + D G+ P+   YN +I GL +        ++   ++ NG      TY IL+  
Sbjct: 332 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEK 467
           L  +G  K+A  LLDE+     E+
Sbjct: 392 LAYEGLIKEARDLLDELCSRAGEE 415



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 167/299 (55%), Gaps = 6/299 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    YG + + +S N +L+ L    ++ED E +  EM ++    N+ +FN +++
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A +++E +   G +P  ++YN L+  +CK+    KM KA A    MV  G
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ---KKMDKAMAFLDLMVSRG 237

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C+   +  A+++  ++   G A  +++YN++I+GL   GK  EA+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM++ GL+P+++T + +  G C++  +E A   F  + + G+ P+ + YN +I   
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           CK      A  +   M+  G +P+ STY  LI GL+ EG ++  R++++EL +   RAG
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS---RAG 413



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 126/245 (51%), Gaps = 3/245 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E  ++   YG   + LS N LL A  K+ K +      
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    ++ S+N +L  LC++G+++ A +++  +K  G +P +++YN +IDG  K 
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +MV  G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 291 ---GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 347

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN++I GLC   +   A+ L   M+ +G  PN  T   LI G   + L+++AR L D+
Sbjct: 348 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 407

Query: 355 ISEQG 359
           +  + 
Sbjct: 408 LCSRA 412



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 21/221 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH+    KK  K  +FL + V  G +  + + ++ L T   +LCR+  +          
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS-YNTLLT---ALCRSGEV---------- 258

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                +  E   +  D G    ++S N ++  L K GK ++   +  EM  + ++ ++ +
Sbjct: 259 ----DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 314

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ +  GLC+  ++  A      ++ +G+ P  V YN +I G CK+    + + A  +F 
Sbjct: 315 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR---RETHSAIDLFA 371

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            M+ NG +PNE T+  LI+G   +  I  A  + +E+ S  
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 245/489 (50%), Gaps = 40/489 (8%)

Query: 25  KNTDPNTV--ILQLFNSDADPVLILRYFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYP 80
           +N  PNTV  +LQ+   D D  L   +F W T+  R    H+      LL +LV A+++ 
Sbjct: 30  RNLVPNTVGRVLQVIK-DVDVSLF--FFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHH 86

Query: 81  KIRSFLHMFVKNGKFTSVSTIFH--ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           +                   IF    L    D+   N I  + L+  + K       F+ 
Sbjct: 87  Q----------------AYQIFRDELLGQHCDT---NHITYNTLIGGFCKAGDMERAFQL 127

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS--FNFVLNGL 196
                + G    V++ + +++AL   G        ++E     +E   DS  FN +++GL
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE----SVECAPDSVLFNILVHGL 183

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CKA +L++A  ++E+M   G+ P VVTYN LIDG CK     +M +A  + + MV+  + 
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSY---RMEEARQLLETMVKRKVR 240

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+NTLI G+CK      A ++ E M   G    VVT+NSLI+G C   K+D+A  +
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M      PN+VT N LI+G C      +A  L  ++  +G+ P +ITYN+LI  +C+
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             ++E AF ++N M++RGV+PD  +Y  L   L +    +    +++ + + G    L T
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +N L+  LC   +  +A  LL  M ++  +   P   TY VL+ G C+ G+++DA  +L 
Sbjct: 421 FNSLMEGLCCSRRLDEARHLLAVMRRVGCD---PAASTYEVLVTGLCKAGRVDDAKEVLV 477

Query: 497 ELLEKGLIP 505
            ++ +G+ P
Sbjct: 478 MMVSEGIQP 486



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 209/408 (51%), Gaps = 40/408 (9%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYK-EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            +CN LLR LVK  +      +++ E+  +  + N  ++N ++ G CKAG + +A  ++ 
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLA 129

Query: 211 DMKSLGVSPKVVT---------------------------------YNILIDGYCKKGGI 237
           +MK  G SP VVT                                 +NIL+ G CK    
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKAN-- 187

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            ++ +A  + ++M E GI+P+ VT+N+LIDG CK   +  A ++ E M    +   +VTY
Sbjct: 188 -QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTY 246

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+LI G C  G    A  L + M+ SG  P+VVT N+LI+GFC+K  ++KA  +   + +
Sbjct: 247 NTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK 306

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
              +P+++TYN LI   C  GR  +A  + + M  RG+LPD+ TYN LI    R   +E 
Sbjct: 307 GLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQ 366

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I N +V  G+    ++Y  L  AL K  +  +A +LLD MF        PN+ T+N 
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMF---DAGAIPNLFTFNS 423

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           L++G C   +L++A  LL  +   G  P  +TY+++   + + G + D
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +      G  +     F     C+     +S++ ++L+    K  +     +  +   
Sbjct: 145 SIVQALCNTGNLSRAMQYFRESVECAP----DSVLFNILVHGLCKANQLSEARQMIEEMS 200

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+   V++ N L+  L K  + E+   + + M +R++  NL ++N ++ G CK G   
Sbjct: 201 ERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTG 260

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  ++E M   G  P VVT+N LI G+C+K    K+ KA  V   M +    PN VT+N
Sbjct: 261 LAHQLIERMIQSGTHPDVVTFNSLISGFCQKS---KIDKACEVLHLMKKGLCAPNLVTYN 317

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G C     + A ++  EM   GI   ++TYNSLI   C + ++++A  +++ M+  
Sbjct: 318 VLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVER 377

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+ ++   L     K +  ++A  L D++ + G  P++ T+N+L++  C   R+++A
Sbjct: 378 GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M   G  P  STY  L+ GL + G V+  + ++  +V+ G++  + +   +V  
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           L ++GK   A+   D++   E +   P+
Sbjct: 498 LAREGKQDLALHYFDQVVAAESKACDPS 525



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 25/162 (15%)

Query: 366 TYNTLIDAYCKEGRMEDAFAM-RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           T N L+    K  R   A+ + R+ +L +    +  TYN LI G  + G++E    ++ E
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G    +VT++ +V ALC  G   +A+    E  +       P+ V +N+L+ G C+
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA-----PDSVLFNILVHGLCK 185

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
             +L +A  ++                   EEM E+G +PD+
Sbjct: 186 ANQLSEARQMI-------------------EEMSERGIVPDV 208


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 241/477 (50%), Gaps = 25/477 (5%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIR-SFLHMFVKNGKFTSVSTIFHALS-------TC 108
           LR    ++L      S+  +K +   + ++  M  K G+   V  + + L        +C
Sbjct: 53  LRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISC 112

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ L  N I        Y +        + F R  ++G + +V   N LL A++ E +F+
Sbjct: 113 SEDLFINVIN------TYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQ 166

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
            +E +Y  MKR   E N+ ++N +L  LCK  +++ A  ++ +M + G  P VV+Y  +I
Sbjct: 167 MIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVI 226

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
               K G + +  +    F+        PN   +N LI+GFC++  +     +  +M   
Sbjct: 227 SSMSKLGKVEEARELSIRFQ--------PNVSVYNALINGFCREYKVKEVFLLLGQMVEK 278

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   V+TY+++I+ L   G ++ A+A+  +M   G  PNV T  +L+ G+  +  V +A
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +++ ++E+G  P+V+ YNTLI   C  G+M +A ++ + M   G  P+VSTY  LI G
Sbjct: 339 LNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            ++ G++ G   I N+++ NG    +V Y  +V  LC+     +A SL++   KM  +  
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIE---KMSTDNC 455

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            PN VT+N  IKG C  G++E A  L  ++ + G  PN  TY  V + ++++  I +
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKE 512



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 199/397 (50%), Gaps = 7/397 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  + + L+  + +  K    F    +  + G+  +V++ + ++ +L   G  E    V+
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M  R    N+ +F  ++ G    G++ +A +I   M   G  P VV YN LI G C  
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   KM +A +V   M  NG  PN  T+  LIDGF K  ++  A +++ +M ++G    V
Sbjct: 368 G---KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y S++N LC      +A +L ++M      PN VT N  I G C    VE A  LF  
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + + G SP++ TYN ++D   KE R+++A  +   M ++G+  ++ TYN +  G    G 
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIV 473
            E    ++ +++  G++   +TYN L  A C  GK K A+ LLD   K+    KW P + 
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLD---KLSAGGKWVPEVA 601

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            Y  L+ G C +  +E+A   L+++L +G+  N  T+
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATW 638



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 170/341 (49%), Gaps = 4/341 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM  Y    +       + R  + G + +V++ N L+  L   GK  +   V  +M+R  
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++  +++G  KAG L  AS+I   M + G  P VV Y  +++  C+     + +
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
              ++ + M  +   PN VTFNT I G C    +  A+ +F +M  +G +  + TYN ++
Sbjct: 445 ---SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GL  + ++ EA+ L  EM   G++ N+VT N +  GFC     E+A  L   +   G+ 
Sbjct: 502 DGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRN 420
           P  ITYNTL  AYC +G+++ A  + + +   G  +P+V+ Y  L+ G+  +  VE    
Sbjct: 562 PDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVL 621

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
            +++++N G+     T+N LV  L         + +LD++ 
Sbjct: 622 YLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDIL 662



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 114/242 (47%), Gaps = 6/242 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +++  ++  F+   ++   +ST  D+   N++  +  +     + +       F +  
Sbjct: 429 SMVNVLCRSSMFSQAWSLIEKMST--DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            YG   ++ + N++L  L+KE + ++   +  EM+ + +ELNL ++N +  G C  GK  
Sbjct: 487 QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFE 546

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTF 262
           +A  ++  M   GV P  +TYN L   YC +   GK+  A  +   +   G  +P    +
Sbjct: 547 EALKLLGKMLVGGVKPDAITYNTLTYAYCMQ---GKVKTAIQLLDKLSAGGKWVPEVAAY 603

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            +L+ G C    +  A+   ++M + GI     T+N+L+ GL         + + D+++ 
Sbjct: 604 TSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILT 663

Query: 323 SG 324
           SG
Sbjct: 664 SG 665


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M ++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MHRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHAPSVVTYNVLMNG 431



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 226/471 (47%), Gaps = 59/471 (12%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +L SLV  K YP + S    F  NG               +  LC  SI+I+     +  
Sbjct: 63  ILSSLVNNKHYPTVISLFKQFEPNG--------------ITPDLCTLSILIN----CFCH 104

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                L F  F      G   + ++ N L++ L   G+ +   Y + ++  +  +L+  S
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  ++NGLCK G+    + ++  ++   V P VV YN +I+  CK   +G    A  V+ 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG---DACDVYS 221

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M+  GI P+ VT+ TLI GFC   ++  A  +  EM    I   V T+N LI+ L  +G
Sbjct: 222 EMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEG 281

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNAL--------------------------------- 335
           K+ EA  L   MM + +KP+V T N+L                                 
Sbjct: 282 KMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYT 341

Query: 336 --INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
             ING CK K+V++A  LF+++  + + P ++TYN+LID  CK   +E A A+   M ++
Sbjct: 342 NMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQ 401

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ PDV +Y  L+ GL + G +E  + I   L+  G    +  Y +L+  LCK G   +A
Sbjct: 402 GIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEA 461

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              LD   KME +   P+ VT++++I+   +K + + A  +L E++ +GL+
Sbjct: 462 ---LDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 201/384 (52%), Gaps = 6/384 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK+    G+   + + + L+     +        V+  + +R    N  + N ++ GLC 
Sbjct: 80  FKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCF 139

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ KA    + + + G     V+Y  LI+G CK G    + +   + + +  + + P+
Sbjct: 140 RGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVAR---LLRKLEGHSVKPD 196

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V +NT+I+  CK++ +  A  V+ EM   GI+  VVTY +LI+G C+ G L EA +L +
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM    + PNV T N LI+   K+  +++A++L   + +  + P V TYN+LID Y    
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ++ A  +  SM  RGV PDV  Y  +I GL +   V+   ++  E+ +  M   +VTYN
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK+   ++A++L     +M+++   P++ +Y +L+ G C+ G+LEDA  +   L
Sbjct: 377 SLIDGLCKNHHLERAIALCK---RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL 433

Query: 499 LEKGLIPNQTTYQIVREEMMEKGF 522
           L KG   N   Y ++   + + GF
Sbjct: 434 LAKGYHLNVHAYTVLINRLCKAGF 457



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 195/372 (52%), Gaps = 8/372 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +L +LV    +  V  ++K+ +   I  +L + + ++N  C    +  A  +  ++  
Sbjct: 61  NNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILK 120

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
            G  P  +T N LI G C +G I K +Y  D     +V  G   ++V++ TLI+G CK  
Sbjct: 121 RGFHPNAITLNTLIKGLCFRGEIKKALYFHD----QLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
              A  ++  ++  H +   VV YN++IN LC +  L +A  +  EM+  G+ P+VVT  
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+GFC    +++A  L +++  + ++P+V T+N LIDA  KEG+M++A  +   M+  
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            + PDV TYN LI G      V+  + +   +   G+   +  Y  ++  LCK     +A
Sbjct: 297 CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEA 356

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +SL +E   M+ +   P+IVTYN LI G C+   LE A  L   + E+G+ P+  +Y I+
Sbjct: 357 MSLFEE---MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 514 REEMMEKGFIPD 525
            + + + G + D
Sbjct: 414 LDGLCKSGRLED 425



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 19/298 (6%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++FK    NGI P+  T + LI+ FC   +I+ A  VF  +   G     +T N+LI GL
Sbjct: 78  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGL 137

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G++ +A+   D+++A G + + V+   LING CK    +    L   +    + P V
Sbjct: 138 CFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDV 197

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           + YNT+I++ CK   + DA  + + M+ +G+ PDV TY  LI G    G+++   +++NE
Sbjct: 198 VMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNE 257

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +   + T+NIL+ AL K+GK K+A  LL  M K   +   P++ TYN LI G+  
Sbjct: 258 MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK---PDVFTYNSLIDGYFL 314

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
             +++ A  +   + ++G+ P+   Y                  + EEM  K  IPDI
Sbjct: 315 VDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDI 372



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 19/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A F  M+     P    FN ++     +++    + +F++   +GI   + T + LIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C    +  A ++   ++  G  PN +T N LI G C +  ++KA    D +  QG   
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
             ++Y TLI+  CK G  +    +   +    V PDV  YN +I  L +   +    ++ 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E++  G+   +VTY  L+   C  G  K+A SLL+E   M+ +   PN+ T+N+LI   
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNE---MKLKNINPNVCTFNILIDAL 277

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
            ++GK+++A  LL  +++  + P+  TY                + V   M ++G  PD+
Sbjct: 278 SKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337

Query: 527 EGHMYNISG 535
           + +   I+G
Sbjct: 338 QCYTNMING 346


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 194/363 (53%), Gaps = 8/363 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           L+  +L+  L K G+  D   V +EM   R   +  +   V+  LC   +++ A +++E+
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF-KDMVENGILPNEVTFNTLIDGFC 270
           M   G++   +TY+ L+DG CK     ++ +A A+   ++   G  P+ VT++T+IDG C
Sbjct: 210 MLHRGMAANAITYSALVDGLCK---CERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +  A+ +FEEM     A   +TYNSLI G C  G +DEA+ L  +M+     P+V+
Sbjct: 267 KAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T   L++ FCK   ++ A  LF  +    LSP V+T+ +L+D  C EGRMEDA  +   +
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             RG  P + TYNC++ G  +   V     ++ +  + G     VTYNILV   C+ G++
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A+  LD++   E      ++  Y +++   C+ G+ +DA     E++++G +P   T+
Sbjct: 444 DQALQYLDQL-NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502

Query: 511 QIV 513
             V
Sbjct: 503 ATV 505



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 207/413 (50%), Gaps = 39/413 (9%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           HLG        D GL    +  N +L  L           ++ +M      +N  ++  +
Sbjct: 28  HLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNL 86

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------- 237
           ++ LCKA  L++A  ++ DMKS G++P  + +N++I G C+ G +               
Sbjct: 87  IHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP 146

Query: 238 ----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                           G++  A  V ++MV    +P+  T   ++   C  + +  A ++
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA-LRDEMMASGLKPNVVTSNALINGFC 340
            EEM   G+AA  +TY++L++GLC   +LDEAVA L  E+   G  P++VT + +I+G C
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +  A  +F+++S    +P+ ITYN+LI  YC+ G M++A  +   M+D    PDV 
Sbjct: 267 KAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  L++   + G ++    +  ++V N +   +VT+  LV  LC +G+ + A+ LL+E 
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE- 382

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             + +    P I TYN ++ G+C+  ++  A  L+ +   +G +PN  TY I+
Sbjct: 383 --ITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 195/356 (54%), Gaps = 12/356 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G+ ++ ++ + L+  L K  +  E V  +  E+ RR    ++ +++ V++GLCKAG+L  
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A DI E+M     +P  +TYN LI GYC+ G    M +A  +   MV++   P+ +T+ T
Sbjct: 274 AVDIFEEMS---CAPTAITYNSLIGGYCRAG---DMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+  FCK   +  A ++F++M ++ ++  VVT+ SL++GLC +G++++A+ L +E+   G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P + T N +++G+CK   V KA  L  D   +G  P+ +TYN L+   C+ GR + A 
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447

Query: 385 AMRNSM-LDRGVLP-DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              + +  + G  P  V+ Y  ++  L R+G  +       E++  G      T+  +V 
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ALCK  + ++A  LL+EM K       P   T + ++  +C+ G ++ A+ L +EL
Sbjct: 508 ALCKAHQPQQAHELLEEMIKY---GHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 13/384 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           D G  S   +   +LR L    K   +   +  E++ R +  +    N +L  LC A   
Sbjct: 3   DAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDT 62

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  + + M  LG       YN LI   CK   + +   A  +  DM   G+ P  +  
Sbjct: 63  TTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDE---AMGLLLDMKSRGMNPGTLLH 118

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N +I G C+   +  A+ V+ +M +       +TY  L++GL   G+L +AV +  EM++
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +   P+  T   ++   C    V+ AR L +++  +G++ + ITY+ L+D  CK  R+++
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 237

Query: 383 AFAMR-NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           A A+    +  RG  PD+ TY+ +I GL + G +    +I  E+         +TYN L+
Sbjct: 238 AVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLI 294

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           G  C+ G   +A+ LL    KM  +   P+++TY  L+  FC+ G+L+DA  L  +++  
Sbjct: 295 GGYCRAGDMDEAIRLLG---KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351

Query: 502 GLIPNQTTYQIVREEMMEKGFIPD 525
            L P+  T+  + + +  +G + D
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMED 375



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 7/242 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D+   + I    LM A+ K  +    +E F++     L   V++   L+  L  EG+ ED
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + +E+ RR     + ++N V++G CK+ ++ KA +++ D +S G  P  VTYNIL+ 
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435

Query: 230 GYCKKGGIGKMYKADAVFKDMV--ENGILPNEVT-FNTLIDGFCKDENISAAMKVFEEMG 286
           G C+ G   +  +    + D +  E G  P  V  +  ++D  C+D     A++ +EEM 
Sbjct: 436 GCCRAGRTDQALQ----YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G      T+ +++  LC   +  +A  L +EM+  G  P   T +A+++ +C+  +++
Sbjct: 492 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQ 551

Query: 347 KA 348
           KA
Sbjct: 552 KA 553


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 219/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++   H   E F+   ++       +C ++L   +K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + +++   G+ P VV++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +GI P+  T++ LI+G CK+  ++ A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKSA---MHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C  G +D A+    EM+  G  P+++T N LI G CK+  +++A+ L D++S +GL
Sbjct: 248 IDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  +  M+   +  D   Y  LI+GL REG   G   
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G  K    LL E   M+++   P +VT
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKE---MQRDGHVPCVVT 418



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 158/281 (56%), Gaps = 11/281 (3%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             +K+++E G   +   FN L+  FCK+  +  A  VF+E+   G+   VV++N+L+NG 
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G LDE   L+  M  SG++P+V T + LING CK+  +  A  LFD++   GL P+ 
Sbjct: 182 IRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNG 241

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+ TLID +CK G ++ A      ML +G  PD+ TYN LI GL +EG+++  +++++E
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDE 301

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIK 480
           +   G++   +TY  L+   CK+G        L+  FK +K     NI    V Y  LI 
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGD-------LETAFKYKKRMIKENIRLDDVAYTALIS 354

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C++G+   A  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 355 GLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 143/270 (52%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVE-NGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF+ ++E  G   ++V  F+ LI  + +   +  A++ F     H       T   +
Sbjct: 48  ASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +                 E++  G   ++   N L++ FCK+  +  A+ +FD+I++ GL
Sbjct: 108 LEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y + G +++ F ++++M   G+ PDV TY+ LI GL +E  +     
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E++ NG+    VT+  L+   CK G    A+    EM +   +   P+++TYN LI 
Sbjct: 228 LFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLR---QGFSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C++G L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKEGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 45/269 (16%)

Query: 296 TYNSLINGLCVDGKLDEA-------VALRDEMMASGL-----------KPNVVTSNALIN 337
           +Y ++I+ LC    L EA       V+ + +  AS +           + +V   + LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLIT 74

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + +   +  A   F    E        T   +++ + K    +  +     +L+ G   
Sbjct: 75  AYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGYPA 134

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            +  +N L+    +EG +   +++ +E+   G+R  +V++N L+    + G        L
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD-------L 187

Query: 458 DEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           DE F+    M      P++ TY+VLI G C++ K+ DAN L +E++  GL+PN  T+  +
Sbjct: 188 DEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTL 247

Query: 514 ----------------REEMMEKGFIPDI 526
                            +EM+ +GF PD+
Sbjct: 248 IDGHCKTGSIDLAMEAYKEMLRQGFSPDL 276


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 231/440 (52%), Gaps = 18/440 (4%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   + + + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRAL 161
               +   +  +   L+ AY++     LGF     + ++   ++       +C ++L  L
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLE-----LGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHL 117

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
           +K   F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P V
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSV 177

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           V+YN L++GY + G + + ++  +    M  +G+ P+  T++ LI+G CK+  +  A K+
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSA---MHASGVHPDVYTYSVLINGLCKESKMDDANKL 234

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F+EM   G+    VT+ +LI+G C +G +D A+ +  +M++  L P++VT NALI G CK
Sbjct: 235 FDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCK 294

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           K  +++A  L D++S  GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   
Sbjct: 295 KGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVA 354

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI+GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E  
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKE-- 412

Query: 462 KMEKEKKWPNIVTYNVLIKG 481
            M+++   P++VTYNVL+ G
Sbjct: 413 -MQRDGHVPSVVTYNVLMNG 431



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCK+ +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG+ P+V T + LING CK+  ++ A  LFD++ E+GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G ++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MXGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKMMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKG 401



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKEGDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P ++TYN LI   CK+G ++ A  + 
Sbjct: 246 NSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M   G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 11/144 (7%)

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           +     +L+ G    +  +N L+    +EG++   +++ + +   G+R  +V+YN L+  
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 186

Query: 444 LCKDGKSKKAVSLLDEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
             + G        LDE F+    M      P++ TY+VLI G C++ K++DAN L +E+L
Sbjct: 187 YIRLGD-------LDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEML 239

Query: 500 EKGLIPNQTTYQIVREEMMEKGFI 523
           EKGL+PN  T+  + +   + G++
Sbjct: 240 EKGLVPNSVTFTTLIDGHCKNGWV 263


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 245/500 (49%), Gaps = 59/500 (11%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
            +R    ++  G++L SLV  K YP +   +H+F +           H + +       N
Sbjct: 42  RMRPPPPIIKFGKILGSLVKTKHYPIV---IHLFQRME--------LHGIQS-------N 83

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
            I +++L+ +Y    + +  F  F +    G +  +++   L+R L   G+ ++    + 
Sbjct: 84  YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD 143

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            +  + I+L+  S+  ++NGLCK G+   A  ++  ++     P VV YN +IDG CK  
Sbjct: 144 RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDK 203

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +   +    ++ +M E  + PN VT+ +LI GFC    +  A  +  EM    +   V 
Sbjct: 204 LVRDAFD---LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVC 260

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF---------------- 339
           T+N+L++GLC +GK+ EA +L   MM  G+ P+V T NAL++G+                
Sbjct: 261 TFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIM 320

Query: 340 -------------------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
                               K K++++A  LF+ +  + + P V+ Y++LID  CK GR+
Sbjct: 321 AQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI 380

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A    + M DRG  P+V TY  LI  L +   V+    ++ ++ + G++A + TYNIL
Sbjct: 381 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 440

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           V  LCKDG+   A  +  ++          ++VTY+++I G C++   ++A  LL+++ +
Sbjct: 441 VDGLCKDGRLTDAQKVFQDLLMKGHN---VDVVTYSIMINGLCKESLFDEALTLLSKMED 497

Query: 501 KGLIPNQTTYQIVREEMMEK 520
           KG +P+   Y+ +     EK
Sbjct: 498 KGCVPDAIAYETIINAFFEK 517



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 237/460 (51%), Gaps = 23/460 (5%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-----------LMLAYVKNM 130
           +R   H  + N       T FH+L   +D++   + ++ M           ++ + VK  
Sbjct: 4   LRFRFHSIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTK 63

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
              +    F+R   +G++S+ ++ N L+ +     +      V+ ++ +   + ++ ++ 
Sbjct: 64  HYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYT 123

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            ++ GLC  G++ ++ +  + + S G+    V+Y  LI+G CK G  G   +   + + +
Sbjct: 124 TLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALR---LLRKI 180

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
                 P+ V +NT+IDG CKD+ +  A  ++ EM    +   VVTY SLI G C+ G+L
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D+A  L +EM+   + PNV T N L++G CK+  + +A+ L   + ++G+ P V TYN L
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300

Query: 371 IDAY--CKE-GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           +D Y   KE G+ ++ F   N M   GV  DV +Y+ +I+GLS+   ++   ++   + N
Sbjct: 301 MDGYFLVKEAGKAKNVF---NIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN 357

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +   +V Y+ L+  LCK G+   A+  +DEM    +    PN++TY  LI   C+  +
Sbjct: 358 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP---PNVITYTSLIDALCKSHQ 414

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++ A  LL ++ ++G+  N  TY I+ + + + G + D +
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 198/353 (56%), Gaps = 6/353 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V+  N ++  L K+    D   +Y EM  +R+  N+ ++  ++ G C  G+L+KA  
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    V+P V T+N L+DG CK+G   KM +A ++   M++ G+ P+  T+N L+D
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEG---KMREAKSLVAVMMKEGVGPDVFTYNALMD 302

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+   +    A  VF  M   G+   V +Y+ +I+GL     LDEA+ L + M    + P
Sbjct: 303 GYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP 362

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VV  ++LI+G CK   +  A    D++ ++G  P+VITY +LIDA CK  +++ A A+ 
Sbjct: 363 DVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALL 422

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             + D+G+  ++ TYN L+ GL ++G +   + +  +L+  G    +VTY+I++  LCK+
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
               +A++LL    KME +   P+ + Y  +I  F +K   + A  LL E+++
Sbjct: 483 SLFDEALTLLS---KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 24/351 (6%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGILPNEV 260
           LN A D    M  +   P ++ +  ++    K     K Y     +F+ M  +GI  N +
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKT----KHYPIVIHLFQRMELHGIQSNYI 85

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T N LI+ +C    I++A  VF ++   G    ++TY +LI GLC++G++ E++   D +
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G+K + V+   LING CK      A  L   I  +   P V+ YNT+ID  CK+  +
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            DAF +   M ++ V P+V TY  LI G    G ++    ++NE+V   +   + T+N L
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           V  LCK+GK ++A SL+  M    KE   P++ TYN L+ G+    +   A  + N + +
Sbjct: 266 VDGLCKEGKMREAKSLVAVMM---KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 501 KGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            G+  +  +Y +                + E M  +  IPD+  +   I G
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 17/182 (9%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A S+  D LC++  I   L   YV  M             D G   +V++   L+ AL K
Sbjct: 366 AYSSLIDGLCKSGRINSAL--KYVDEMH------------DRGQPPNVITYTSLIDALCK 411

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             + +    + K++K + I+ N+ ++N +++GLCK G+L  A  + +D+   G +  VVT
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVT 471

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           Y+I+I+G CK+       +A  +   M + G +P+ + + T+I+ F + +    A K+  
Sbjct: 472 YSIMINGLCKESLFD---EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLR 528

Query: 284 EM 285
           EM
Sbjct: 529 EM 530


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 219/417 (52%), Gaps = 8/417 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ L  N+ +   L++ + K     L  EA ++     +   +   N L++ L   G+ E
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           + E  Y ++++R +  +  +++ +++G CK G L KA  ++  M + G+ P   TY  L+
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           +GY K        K  ++ + M+ +G  P+   +  +I    + EN+  A  V  E+  +
Sbjct: 601 EGYFKSN---DYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   +  Y+SLI+GLC    +++AV L DEM   GL+P +V  NALI+GFC+   + +A
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 717

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R +FD I  +GL P+ +TY  LID  CK G + DAF +   MLDRG+ PD   YN L  G
Sbjct: 718 RNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG 777

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            S   ++E    +  E+ N G  A +  +N LV   CK GK ++   LL  M  M++E  
Sbjct: 778 CSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVM--MDRE-I 833

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT-TYQIVREEMMEKGFIP 524
            PN  T   ++  F + GKL +A+ +  EL +K    + T  + ++  +M+ KG IP
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLIP 890



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 243/509 (47%), Gaps = 49/509 (9%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGK-----FTS 97
           P L+L +F WS   + A  S     RL  SL  A  +P+    LH  +           S
Sbjct: 96  PKLLLDFFYWSRPRI-APPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLAS 154

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           +          S S   ++ ++D+L+  Y K        +      D GL  +   CN L
Sbjct: 155 IQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGL 214

Query: 158 LRALVK--------------EGK---------------------FEDVEYVYKEMKRRRI 182
           L+ L++              EG                      F+  + V++EM+RR  
Sbjct: 215 LKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
            +N  ++N +++GLC++G + +A    E+M   G+SP   TY  L++G CK     ++ +
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKG---SRLKE 331

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+  +M  +G+ PN V + TL+DGF K+   + A  + +EM S G+    + Y++LI 
Sbjct: 332 AKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIR 391

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC  G+L  A  L  EM+  GL+P+  T N L+ G  ++   + A  L +++   G+ P
Sbjct: 392 GLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILP 451

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V +Y  +I+  C+ G  ++A  +   M+  G+ P+   Y  LI G S+EGN+      +
Sbjct: 452 NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL 511

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKG 481
            ++    +   L  YN L+  L   G+ ++A    +E + +++K    P+  TY+ LI G
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEA----EEYYAQVQKRGLVPDEFTYSGLIHG 567

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +C+ G LE A+ LL ++L  GL PN  TY
Sbjct: 568 YCKTGNLEKADQLLRQMLNSGLKPNADTY 596



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 224/446 (50%), Gaps = 25/446 (5%)

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           +CS  L  N ++   L+  ++K  K    F+  K     G++ + +  + L+R L K G+
Sbjct: 340 SCS-GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQ 398

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                 + KEM +  +  +  ++N ++ G  +    + A +++ +M++ G+ P V +Y I
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +I+G C+ G   +  +A  + ++M+  G+ PN   +  LI G  K+ NIS A +  E+M 
Sbjct: 459 MINGLCQNG---ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   +  YNSLI GL   G+++EA     ++   GL P+  T + LI+G+CK   +E
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           KA  L   +   GL P+  TY  L++ Y K    E   ++  SML  G  PD   Y  +I
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             LSR  N+E    ++ E+  NG+   L  Y+ L+  LCK    +KAV LLDE   M KE
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE---MAKE 692

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------------- 512
              P IV YN LI GFC+ G +  A  + + +L KGL+PN  TY                
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 513 --VREEMMEKGFIPDIEGHMYNISGT 536
             + +EM+++G  PD    +YN+  T
Sbjct: 753 FDLYKEMLDRGIAPD--AFVYNVLAT 776



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D +S   SP     ++L+D Y K G +     A  V   M + G+ P     N L+    
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSV---RNAAQVVLMMADLGLAPTRRCCNGLLKDLL 219

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           + + +    K+   M   GI   V TY++ I   C     D A  + +EM       N V
Sbjct: 220 RADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV 279

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +I+G C+   VE+A    +++ + GLSP   TY  L++  CK  R+++A A+ + M
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G+ P++  Y  L+ G  +EG      +I+ E+++ G++   + Y+ L+  LCK G+ 
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  LL EM K+      P+  TYN L++G  Q+   + A  LLNE+   G++PN  +Y
Sbjct: 400 GRASKLLKEMIKVGLR---PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSY 456

Query: 511 QIVREEMMEKG 521
            I+   + + G
Sbjct: 457 GIMINGLCQNG 467


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 220/413 (53%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 8   MIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLITAYLE 67

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 68  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 127

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 185

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+  I  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 186 -MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNG 244

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL P  ITY 
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 304

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CK+G ++ AF  R  M+      D   Y  LI+GL REG       ++ E+++ 
Sbjct: 305 TLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSV 364

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G   K   LL E   M+++   P++VTYNVL+ G
Sbjct: 365 GLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVTYNVLMNG 414



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 162/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIR 172

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 173 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVT 232

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 292

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CKDG    A    +   +M +E    + V Y  LI G C++G
Sbjct: 293 MKGLKPDKITYTTLIDGCCKDGDLDTA---FEHRKRMIQENTRLDDVVYTALISGLCREG 349

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 350 XSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 52  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRI---AQSVFDAITKWGLRPSVVSYNTLMN 168

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 169 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVP 228

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 229 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  ++G+++        ++    R   V Y  L+  LC++
Sbjct: 289 DEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCRE 348

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 349 GXSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 405

Query: 508 TTYQIV 513
            TY ++
Sbjct: 406 VTYNVL 411



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 4   SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 44

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 45  FETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 104

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 105 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI------TKWGLRP 158

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 159 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 218

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG +P+       I+GH  N
Sbjct: 219 DEMLVKGLVPNSVTFTTLIDGHCKN 243


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 225/458 (49%), Gaps = 63/458 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +N    L F  F R    G   + ++ + L+  L  EG+ ++   + +EM  + 
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           IE  + ++   +  LC      +A +++  MK  G  P V TY  LI G  +   +GK+ 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR---LGKLE 355

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  ++  M++ G++PN VT+N LI+  C     S A+K+F  M  HG  A   TYN +I
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN------------------------ 337
            GLC+ G +++A+ L ++M+  G  P VVT N LIN                        
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 338 -----------GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
                      GF K   +E A   F ++ E GL+P+ ++Y  LID + K+G+++ A ++
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  P+V +YN +I GLS+E        I +++V  G+   ++TY  L+  LC+
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G+++ A  +  +   MEK K  PN+ TY+ LI G CQ+GK ++A      + E G  P 
Sbjct: 596 NGRTQFAFKIFHD---MEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPT 648

Query: 507 QTTY-----------------QIVREEMMEKGFIPDIE 527
             TY                 Q+V+ +M E+GF PD E
Sbjct: 649 LDTYSTLVSGLCRKGRFYEAEQLVK-DMKERGFCPDRE 685



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 224/480 (46%), Gaps = 89/480 (18%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDY-------GLKSSVLSCNQLLRALVKEGKFEDVE 171
           I +LM+   +N       E  +R  D+       G   S+ SCN LL  L K    E   
Sbjct: 130 IRILMIKACRNE------EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +YK+M    I+ +L +FN ++N L K GK+ +A  I+  +    +SP V TY  LI G+
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   +   +    VF  MV+ G  PN VT++TLI+G C +  +  A+ + EEM   GI 
Sbjct: 244 CRNRNLDLAF---GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 292 AGVV-----------------------------------TYNSLINGLCVDGKLDEAVAL 316
             V                                    TY +LI+GL   GKL+ A+ L
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 317 RDEMMASGLKPNVVTSNALIN-----------------------------------GFCK 341
             +M+  GL PN VT NALIN                                   G C 
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +EKA VLF+ + + G  P+V+TYNTLI+ Y  +G + +A  + + M + G  PD  T
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L++G S+ G +E       E+V  G+    V+Y  L+    KDGK   A+SLL    
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK--- 537

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +ME+    PN+ +YN +I G  ++ +  +A  + ++++E+GL+PN  TY  + + +   G
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 201/440 (45%), Gaps = 68/440 (15%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + ++ N L+  L   G+F     ++  M+      N  ++N ++ GLC  G + KA
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             + E M  +G  P VVTYN LI+GY  KG +                            
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487

Query: 238 ----GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               GK+  A   F++MVE G+ PN V++  LIDG  KD  +  A+ + + M   G    
Sbjct: 488 FSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V +YN++INGL  + +  EA  + D+M+  GL PNV+T   LI+G C+    + A  +F 
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 607

Query: 354 DI-------------------------------SEQGLSPSVITYNTLIDAYCKEGRMED 382
           D+                               SE G  P++ TY+TL+   C++GR  +
Sbjct: 608 DMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYE 667

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M +RG  PD   Y  L+    +   V+    I + +   G +  L  Y  L+ 
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 727

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           ALCK G+ ++A +L D M     EK+W  + + + VL+ G  ++G+L+    LL+ +  K
Sbjct: 728 ALCKAGQVEEAQALFDNML----EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783

Query: 502 GLIPNQTTYQIVREEMMEKG 521
              PN  TY I+  E+   G
Sbjct: 784 NFTPNIQTYVILGRELSRIG 803



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 7/322 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   + GL  + +S   L+    K+GK +    + K M+      N++S+N V+NGL K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             + ++A  I + M   G+ P V+TY  LIDG C+ G     +K   +F DM +   LPN
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK---IFHDMEKRKCLPN 617

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+++LI G C++     A    E M   G    + TY++L++GLC  G+  EA  L  
Sbjct: 618 LYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 673

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M   G  P+     +L+   CK   V+ A  +F  I  +G    +  Y  LI A CK G
Sbjct: 674 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 733

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++E+A A+ ++ML++    D   +  L+ GL +EG ++    +++ + +      + TY 
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 793

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
           IL   L + GKS ++  L D++
Sbjct: 794 ILGRELSRIGKSIESEPLADKL 815


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A  +F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY ++V   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHAPSVVTYNVLMNG 431



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 401



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY +++  FC+KG +   + LL E+   G  P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 227/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H +   + + + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E        +L  FN + +  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + +K  +    M  +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFKLKSA---MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  + 
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       +M E+++ G++    TY +++  +CK G   K   LL E   M+ +
Sbjct: 360 SGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKE---MQXD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHAPSVVTYNVLMNG 431



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 160/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L   FCK+ +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG+ P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G++    ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  ++ E+L  GL P+  TY ++  E+ +KG
Sbjct: 363 CQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKG 401



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  L  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL   +CK+G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    K+   M + G+   V TY+ LINGLC + K+D A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G +  A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  ++ EM  +  +   P+  TY ++I   C+KG +   + LL E+   G  P+ 
Sbjct: 366 GRSVDAEKMMREMLSVGLK---PDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 207/393 (52%), Gaps = 6/393 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   R  + G K  +++ N L+  L   GK  +   +  +M     + N  ++  VLN
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK+G+   A +++  M+   +    V Y+I+IDG CK G +   +    +F +M   G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN---LFNEMEMKG 293

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I  N +T+N LI GFC         K+  +M    I   VVT++ LI+    +GKL EA 
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P+ +T  +LI+GFCK+  ++KA  + D +  +G  P++ T+N LI+ Y
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  R++D   +   M  RGV+ D  TYN LI G    G +   + +  E+V+  +   +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY IL+  LC +G+S+KA+ + +   K+EK K   +I  YN++I G C   K++DA  L
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
              L  KG+ P   TY I+   + +KG + + E
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 210/405 (51%), Gaps = 41/405 (10%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +YG + + ++   +L  + K G+      + ++M+ R I+L+   ++ +++GLCK G L+
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++  +M+  G++  ++TYNILI G+C  G   +      + +DM++  I PN VTF+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAG---RWDDGAKLLRDMIKRKINPNVVTFS 337

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID F K+  +  A ++ +EM   GIA   +TY SLI+G C +  LD+A  + D M++ 
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+ T N LING+CK   ++    LF  +S +G+    +TYNTLI  +C+ G++  A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------------GVRNIMNEL 425
             +   M+ R V P++ TY  L+ GL   G  E                  G+ NI+   
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517

Query: 426 VNN-----------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           + N                 G++ G+ TYNI++G LCK G   +A  L     KME++  
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR---KMEEDGH 574

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            P+  TYN+LI+     G    +  L+ EL   G   + +T ++V
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 41/407 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V+  ++L  A+ K  +++ V  + K+M+ + I  NL + + ++N  C+  KL  A   M
Sbjct: 87  TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             +  LG  P  +T++ LI+G C +G   ++ +A  +   MVE G  P+ +T NTL++G 
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEG---RVSEALELVDRMVEMGHKPDLITINTLVNGL 203

Query: 270 -----------------------------------CKDENISAAMKVFEEMGSHGIAAGV 294
                                              CK    + AM++  +M    I    
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y+ +I+GLC  G LD A  L +EM   G+  N++T N LI GFC     +    L  D
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + ++ ++P+V+T++ LID++ KEG++ +A  +   M+ RG+ PD  TY  LI G  +E +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +++ +V+ G    + T+NIL+   CK  +    + L     KM       + VT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVT 440

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           YN LI+GFC+ GKL  A  L  E++ + + PN  TY+I+ + + + G
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
           K + A D+  DM      P V+ ++ L         I K  + D V    K M   GI  
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLF------SAIAKTKQYDLVLALCKQMELKGIAH 121

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T + +I+ FC+   +  A     ++   G     +T+++LINGLC++G++ EA+ L 
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D M+  G KP+++T N L+NG C      +A +L D + E G  P+ +TY  +++  CK 
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+   A  +   M +R +  D   Y+ +I GL + G+++   N+ NE+   G+   ++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NIL+G  C  G+      LL +M    K K  PN+VT++VLI  F ++GKL +A  L  E
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMI---KRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358

Query: 498 LLEKGLIPNQTTY 510
           ++ +G+ P+  TY
Sbjct: 359 MIHRGIAPDTITY 371



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 173/307 (56%), Gaps = 4/307 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ + VKEGK  + E ++KEM  R I  +  ++  +++G CK   L+KA+
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M S G  P + T+NILI+GYCK   I    +   +F+ M   G++ + VT+NTLI
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE---LFRKMSLRGVVADTVTYNTLI 445

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   ++ A ++F+EM S  +   +VTY  L++GLC +G+ ++A+ + +++  S ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++   N +I+G C    V+ A  LF  +  +G+ P V TYN +I   CK+G + +A  +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  PD  TYN LI     +G+      ++ EL   G      T  +++  L  
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-S 624

Query: 447 DGKSKKA 453
           DG+ KK+
Sbjct: 625 DGRLKKS 631



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E G    +   ++Y   +    VD K D+A+ L  +M+ S   P V+  + L +   K K
Sbjct: 43  ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK 102

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             +    L   +  +G++ ++ T + +I+ +C+  ++  AF+    ++  G  P+  T++
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-- 461
            LI GL  EG V     +++ +V  G +  L+T N LV  LC  GK  +A+ L+D+M   
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222

Query: 462 ------------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                                         KME+     + V Y+++I G C+ G L++A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282

Query: 492 NGLLNELLEKGLIPNQTTYQIV 513
             L NE+  KG+  N  TY I+
Sbjct: 283 FNLFNEMEMKGITTNIITYNIL 304


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 208/384 (54%), Gaps = 17/384 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+  +VL+ N ++      GK+ D E + ++M  R I+ ++ +F+ ++N   K
Sbjct: 103 FTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVK 162

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK++ A ++  +M    + P  +TY+ +IDG+CK     ++  A  +F  MV  G  P+
Sbjct: 163 EGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH---SRLEDAKHMFDLMVSKGCSPD 219

Query: 259 EVTFNTLID-----------GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +T NTLID           GFC+  N++ A  +F+EM S+G++  +VT N+L+ GLC +
Sbjct: 220 IITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GKL++A+ +      S +  +  T N +ING CK   V++A  LF+ +   G+   V+TY
Sbjct: 280 GKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI  + KEG    A  +   ML +G++P   TYN ++ G  ++  +E  R +++ +V+
Sbjct: 340 NILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    +VT++ L+   CK G+    + L  EM    +     + +TYN LI GFC+ G 
Sbjct: 400 EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMC---QRGLVADTITYNALIHGFCKVGD 456

Query: 488 LEDANGLLNELLEKGLIPNQTTYQ 511
           L  A  +  E++  G+ P+  T++
Sbjct: 457 LNGAQDIFEEMVSSGVCPDTITFR 480



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 223/414 (53%), Gaps = 33/414 (7%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            ++  +  +K++V+  + ++  L K+G     + ++ EM  + I  N+ ++N +++G C 
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK + A  ++ DM    + P VVT++ LI+ + K+   GK+  A+ ++++M+   I P 
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKE---GKVSGAEELYREMLRRNIFPT 184

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN-----------GLCVD 307
            +T++++IDGFCK   +  A  +F+ M S G +  ++T N+LI+           G C  
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G ++ A  L  EM+++G+ P++VT N L+ G C+   +EKA  +F    +  +     T 
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATC 304

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +I+  CK  ++++A+ + NS+   GV  DV TYN LI    +EGN     +I  E++ 
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+    VTYN +V   CK  + ++A  ++D M     E   P++VT++ LIKG+C+ G+
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV---SEGCSPDVVTFSTLIKGYCKAGR 421

Query: 488 LEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
           ++D   L +E+ ++GL+ +  TY                Q + EEM+  G  PD
Sbjct: 422 VDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 199/360 (55%), Gaps = 11/360 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ + L+ A VKEGK    E +Y+EM RR I     +++ +++G CK  +L  A 
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAK 205

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKG--------GIGKMYKADAVFKDMVENGILPN 258
            + + M S G SP ++T N LIDG C+           +G +  A  +F++M+ NG+ P+
Sbjct: 206 HMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT NTL+ G C++  +  A+++F+      +     T N +ING+C   K+DEA  L +
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN 325

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  +G++ +VVT N LI  F K+    +A  ++ ++  +G+ PS +TYN+++D +CK+ 
Sbjct: 326 SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN 385

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R+E+A  M +SM+  G  PDV T++ LI G  + G V+    + +E+   G+ A  +TYN
Sbjct: 386 RLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYN 445

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   CK G    A  + +EM         P+ +T+  ++ G C K +L+    +L +L
Sbjct: 446 ALIHGFCKVGDLNGAQDIFEEMV---SSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 35/368 (9%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ +F  ++NGLC+ G++ +A  +++ M   G  P  VTY  +++G CK   +G    A 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCK---LGDTVSAL 65

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M E+ I  N V ++ ++D  CKD N   A  +F EM   GI   V+TYN +I+G 
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  GK  +A  L  +M+   + P+VVT +ALIN F K+  V  A  L+ ++  + + P+ 
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT 185

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE-----------G 413
           ITY+++ID +CK  R+EDA  M + M+ +G  PD+ T N LI G  R            G
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVG 245

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM-EKEKKWPNI 472
           NV   +++  E+++NG+   +VT N L+  LC++GK +KA+    EMFK+ +K K   + 
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKAL----EMFKVFQKSKMDLDT 301

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-----VRE-----------E 516
            T N++I G C+  K+++A  L N L   G+  +  TY I     V+E           E
Sbjct: 302 ATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLE 361

Query: 517 MMEKGFIP 524
           M+ KG IP
Sbjct: 362 MLCKGIIP 369



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 14/283 (4%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MVE G   N VTF TL++G C++  +  A+ + + M   G     VTY +++NG+C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
              A+ +  +M  S +K NVV  +A+++  CK     KA+ +F ++ E+G+ P+V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID YC  G+  DA  +   M++R + PDV T++ LI    +EG V G   +  E++   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV-----------L 478
           +    +TY+ ++   CK  + + A  + D M     +   P+I+T N            L
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMV---SKGCSPDIITLNTLIDGCCRAKRHL 237

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I GFCQ G +  A  L  E++  G+ P+  T   +   + E G
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENG 280



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 155/318 (48%), Gaps = 48/318 (15%)

Query: 78  KYPKIRSFLHMF---VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           K+ ++    HMF   V  G    + T    L+T  D  CR       L+  + +    ++
Sbjct: 197 KHSRLEDAKHMFDLMVSKGCSPDIIT----LNTLIDGCCRAK---RHLIHGFCQVGNVNV 249

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F+     G+   +++CN LL  L + GK E    ++K  ++ +++L+  + N ++N
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 195 GLCKAGKLN-----------------------------------KASDIMEDMKSLGVSP 219
           G+CK  K++                                   +A DI  +M   G+ P
Sbjct: 310 GMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             VTYN ++DG+CK+    ++ +A  +   MV  G  P+ VTF+TLI G+CK   +   +
Sbjct: 370 STVTYNSMVDGFCKQ---NRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           ++F EM   G+ A  +TYN+LI+G C  G L+ A  + +EM++SG+ P+ +T  +++ G 
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 340 CKKKLVEKARVLFDDISE 357
           C K  ++K   + +D+ +
Sbjct: 487 CTKAELQKGLTMLEDLQK 504



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 127/240 (52%), Gaps = 5/240 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    +NGK      +F         L  ++   ++++    K  K    ++ F    
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDL--DTATCNIIINGMCKGNKVDEAWDLFNSLP 328

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+++ V++ N L+   VKEG F   E +Y EM  + I  +  ++N +++G CK  +L 
Sbjct: 329 VNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLE 388

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +++ M S G SP VVT++ LI GYCK G +    +   +F +M + G++ + +T+N
Sbjct: 389 EARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLE---LFSEMCQRGLVADTITYN 445

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI GFCK  +++ A  +FEEM S G+    +T+ S++ GLC   +L + + + +++  S
Sbjct: 446 ALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 100/171 (58%), Gaps = 3/171 (1%)

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E G   +V+T+ TL++  C+EGR+  A A+ + M++ G  PD  TY  ++ G+ + G+  
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++ ++  + ++A +V Y+ +V  LCKDG   KA ++  EM    ++  +PN++TYN
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM---HEKGIFPNVLTYN 119

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            +I G+C  GK  DA  LL +++E+ + P+  T+  +    +++G +   E
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAE 170


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 203/366 (55%), Gaps = 9/366 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V++ N ++      G+ +    +  +M    +E +  ++N ++ GLC  G+   A  
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++DM   G  P VVTY IL++  CK+ G  +  K   +  +M   G  P+ +T+N +++
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK---LLDEMRAKGCAPDIITYNVVVN 234

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C++  +  A++  + + SHG     V+YN ++ GLC   + ++A  L  EM   G  P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT N LI+  C++ LVE A  + D I + G +P+ ++YN ++ A+CK+ +M+ A A  
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ RG  PD+ +YN L+  L R G V+    ++++L + G    L++YN ++  L K 
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK+K+A+ LL+EM     +   P+I+TY+ +  G C++ ++E+A     ++ + G+ PN 
Sbjct: 415 GKTKEALELLNEMV---TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471

Query: 508 TTYQIV 513
             Y  +
Sbjct: 472 VLYNAI 477



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 212/386 (54%), Gaps = 6/386 (1%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           A +   D  ++    + N L+R L   G+  +   V  +M RR    ++ ++  +L   C
Sbjct: 143 ARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATC 202

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K     +A  ++++M++ G +P ++TYN++++G C++   G++  A    K +  +G  P
Sbjct: 203 KRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE---GRVDDAIEFLKSLPSHGCEP 259

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N V++N ++ G C  E    A K+  EM   G    VVT+N LI+ LC  G ++ A+ + 
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVL 319

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D++   G  PN ++ N +++ FCK+K +++A    + +  +G  P +++YNTL+ A C+ 
Sbjct: 320 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRG 379

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A  + + + D+G  P + +YN +I GL++ G  +    ++NE+V  G++  ++TY
Sbjct: 380 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITY 439

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + +   LC++ + ++A+       K++     PN V YN ++ G C++ +  +A  L   
Sbjct: 440 STISSGLCREDRIEEAIR---AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIY 496

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++  G +PN++TY I+ E +  +G +
Sbjct: 497 MISNGCMPNESTYTILIEGLTYEGLV 522



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 194/359 (54%), Gaps = 6/359 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++   LL A  K   ++    +  EM+ +    ++ ++N V+NG+C+ G+++ A
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + ++ + S G  P  V+YNI++ G C      +   A+ +  +M + G  PN VTFN L
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAE---RWEDAEKLMAEMSQKGYPPNVVTFNML 302

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C+   +  AM+V +++  +G     ++YN +++  C   K+D A+A  + M++ G 
Sbjct: 303 ISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGC 362

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++V+ N L+   C+   V+ A  L   + ++G +P +I+YNT+ID   K G+ ++A  
Sbjct: 363 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+ +G+ PD+ TY+ + +GL RE  +E       ++ + G+R   V YN ++  LC
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC 482

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K  ++  A+ L      M      PN  TY +LI+G   +G +++A  LL EL  +G++
Sbjct: 483 KRRETHNAIDLF---IYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 167/296 (56%), Gaps = 3/296 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    +G + + +S N +L+ L    ++ED E +  EM ++    N+ +FN +++
Sbjct: 245 AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS 304

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A ++++ +   G +P  ++YN ++  +CK+    KM +A A  + MV  G
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ---KKMDRAMAFVELMVSRG 361

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C+   + AA+++  ++   G    +++YN++I+GL   GK  EA+
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM+  GL+P+++T + + +G C++  +E+A   F  + + G+ P+ + YN ++   
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           CK     +A  +   M+  G +P+ STY  LI GL+ EG V+  R ++ EL + G+
Sbjct: 482 CKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 31/247 (12%)

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN--ALINGFCKKKLVEKARVLFDDI 355
           N  + GL   G L+EA+ L + M  SGL+P+       ALI   C      +AR +    
Sbjct: 63  NDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL--- 117

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
                 P V+ YN ++  YC  G+++   A R  + D  + PD  TYN LI GL   G  
Sbjct: 118 --AACEPDVMAYNAMVAGYCVTGQLD---AARRLVADMPMEPDSYTYNTLIRGLCGRGRT 172

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                ++++++  G    +VTY IL+ A CK    K+A+ LLDE   M  +   P+I+TY
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDE---MRAKGCAPDIITY 229

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMME 519
           NV++ G CQ+G+++DA   L  L   G  PN  +Y IV +                EM +
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289

Query: 520 KGFIPDI 526
           KG+ P++
Sbjct: 290 KGYPPNV 296



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 3/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E   +   YG   + LS N +L A  K+ K +      
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M  R    ++ S+N +L  LC+ G+++ A +++  +K  G +P +++YN +IDG  K 
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +MV  G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 415 ---GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN+++ GLC   +   A+ L   M+++G  PN  T   LI G   + LV++AR L  +
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531

Query: 355 ISEQGL 360
           +  +G+
Sbjct: 532 LCSRGV 537



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 8/223 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS+  + ++ A+ K  K        +     G    ++S N LL AL + G+ +    + 
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++K +     L S+N V++GL KAGK  +A +++ +M + G+ P ++TY+ +  G C++
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             I +  +A    +DM   GI PN V +N ++ G CK      A+ +F  M S+G     
Sbjct: 450 DRIEEAIRAFCKVQDM---GIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
            TY  LI GL  +G + EA  L  E+ + G     V S  LIN
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSRG-----VVSKGLIN 544



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 27/159 (16%)

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           FA          +P  +  N  + GL R G++E    ++  +      A       L+  
Sbjct: 44  FAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKK 103

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC  G++ +A  +L            P+++ YN ++ G+C  G+L+ A  L+ ++    +
Sbjct: 104 LCASGRTAEARRVLAAC--------EPDVMAYNAMVAGYCVTGQLDAARRLVADM---PM 152

Query: 504 IPNQTTYQ----------------IVREEMMEKGFIPDI 526
            P+  TY                 +V ++M+ +G +PD+
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDV 191


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++   L+  L    K  +   +   M +R  + NL ++  V+NGLCK G  + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  M++  +   VV +N +ID  CK   +     A  +FK+M   GI PN VT+++L
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 301

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   +VT+N+LI+    +GK  EA  L D+M+   +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T N+L+NGFC    ++KA+ +F+ +  +   P V+TYNTLI  +CK  R+ED   
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ D  TY  LI GL  +G+ +  + +  ++V++G+   ++TY+IL+  LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
            +GK +KA+ + D M K E                     +  W            PN+V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TYN +I G C K  L++A  LL ++ E G +PN  TY  +    +  G
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 210/394 (53%), Gaps = 24/394 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+ K  KF+ V  + ++M+R  I   L ++N ++N  C+  +++ A  ++
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+ +TF TLI G 
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 200

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + + M   G    +VTY  ++NGLC  G  D A+ L ++M A+ ++ +V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+  CK + V+ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + 
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++ + P++ T+N LI    +EG       + ++++   +   + TYN LV   C   +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             KA     +MF+ M  +  +P++VTYN LIKGFC+  ++ED   L  E+  +GL+ +  
Sbjct: 381 LDKA----KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 509 TY----------------QIVREEMMEKGFIPDI 526
           TY                Q V ++M+  G  PDI
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 188/356 (52%), Gaps = 17/356 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            +T  DSLC+   + D L L              FK     G++ +V++ + L+  L   
Sbjct: 263 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 308

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G++ D   +  +M  ++I  NL +FN +++   K GK  +A  + +DM    + P + TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N L++G+C      ++ KA  +F+ MV     P+ VT+NTLI GFCK + +    ++F E
Sbjct: 369 NSLVNGFCMHD---RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    VTY +LI GL  DG  D A  +  +M++ G+ P+++T + L++G C    
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +EKA  +FD + +  +   +  Y T+I+  CK G+++D + +  S+  +GV P+V TYN 
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +I+GL  +  ++    ++ ++  +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +++ V+  N ++ +L K    +D   ++KEM+ + I  N+ +++ +++ LC  G+ + AS
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P +VT+N LID + K+G   K  +A+ ++ DM++  I P+  T+N+L+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLYDDMIKRSIDPDIFTYNSLV 372

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +GFC  + +  A ++FE M S      VVTYN+LI G C   ++++   L  EM   GL 
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + VT   LI G       + A+ +F  +   G+ P ++TY+ L+D  C  G++E A  +
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M    +  D+  Y  +I G+ + G V+   ++   L   G++  +VTYN ++  LC 
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
               ++A +LL    KM+++   PN  TYN LI+   + G    +  L+ E+     + +
Sbjct: 553 KRLLQEAYALLK---KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609

Query: 507 QTTYQIV 513
            +T  +V
Sbjct: 610 ASTIGLV 616



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 162/305 (53%), Gaps = 39/305 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++++ N L+ A VKEGKF + E +Y +M +R I+ ++ ++N ++NG C   +L+KA 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++     +F++M   G++ + VT+ TLI
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            G   D +   A KVF++M S G+   ++TY+ L++GLC +GKL++A+ + D M  S   
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
                                           G+KPNVVT N +I+G C K+L+++A  L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G  P+  TYNTLI A+ ++G    +  +   M     + D ST   L+A +  
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 621

Query: 412 EGNVE 416
           +G ++
Sbjct: 622 DGRLD 626



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 38/259 (14%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
              ++G   Y  ++     D KLD+A+ L   M+ S   P++V  N L++   K K  + 
Sbjct: 44  RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEG----------------------------- 378
              L + +    +   + TYN LI+ +C+                               
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 379 ------RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
                 R+ DA A+ + M++ G  PD  T+  LI GL           +++ +V  G + 
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            LVTY ++V  LCK G +  A++LL+   KME  K   ++V +N +I   C+   ++DA 
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280

Query: 493 GLLNELLEKGLIPNQTTYQ 511
            L  E+  KG+ PN  TY 
Sbjct: 281 NLFKEMETKGIRPNVVTYS 299


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 229/436 (52%), Gaps = 43/436 (9%)

Query: 109 SDSLCRNSIIIDMLMLA-YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           +D++C N+++        + K MK    +E   R  D G   ++ +   +L  L K G+F
Sbjct: 226 ADAVCYNALLSGCFRTGMFEKAMKV---WEQLVR--DPGASPNLATYKVMLDGLCKLGRF 280

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ++   V+  M     + +  ++  +++GLC++G ++ A+ +  DM   G+   V  YN L
Sbjct: 281 KEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340

Query: 228 IDGYCKKGGIGKMYK---------------ADAVFKDMVENGIL---------------- 256
           I G+C+ G  G+ +K                + + K ++++G++                
Sbjct: 341 IKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 257 -PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P++VTF TLI G C++   + A ++ E+  + G    V +Y+S+IN  C DG+  +A  
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   M+  G KPN    NALINGFC+   +  A  ++ +++  G  P++ITYNTLID  C
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K  + ++A ++   ML+RG  PD+ TY  LI GL R+  V+    I +E+++ G++  ++
Sbjct: 521 KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGL 494
            +NIL+  LC  GK  +A  +  EM    KEK   PN+VTYN L+ GF + G ++ A  L
Sbjct: 581 VHNILIHGLCSAGKVDEAFCIYLEM----KEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636

Query: 495 LNELLEKGLIPNQTTY 510
              +L+ GL P+  TY
Sbjct: 637 WTAILDNGLKPDIVTY 652



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 183/302 (60%), Gaps = 6/302 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +F  +++GLC+ G  N+A +I+ED ++ G    V +Y+ +I+ +CK G   + + A+ V+
Sbjct: 406 TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDG---RTHDANEVY 462

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K+MV++G  PN   +N LI+GFC+   I+ A+K++ EM S+G    ++TYN+LI+GLC  
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K  EA +L  EM+  G KP++ T  +LI G C+ K V+ A  ++D+I + GL   V+ +
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N LI   C  G++++AF +   M ++   P++ TYN L+ G    G+++   ++   +++
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           NG++  +VTYN  +  LC   ++ + V LL+E+         P ++T+++L++   + G 
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVL---ATGIMPTVITWSILVRAVIKYGP 699

Query: 488 LE 489
           ++
Sbjct: 700 IQ 701



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 9/380 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKL 202
           +YG+++  +  N LL    + G FE    V++++ R      NL ++  +L+GLCK G+ 
Sbjct: 221 NYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 280

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A ++   M +       VTY ILI G C+ G +     A  V+ DMV+ G++ +   +
Sbjct: 281 KEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDS---AARVYSDMVKAGLVLDVSVY 337

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM- 321
           N+LI GFC+      A K ++  G  GI   + TYN +  GL   G + EA  L  ++  
Sbjct: 338 NSLIKGFCEVGRTGEAWKFWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLEN 396

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +   P+ VT   LI+G C+     +A  + +D    G    V +Y+++I+ +CK+GR  
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +  +M+  G  P+   YN LI G  R   +     I  E+ +NG    ++TYN L+
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK  K ++A SL  EM  +E+  K P+I TY  LI+G C+  K++ A  + +E+L+ 
Sbjct: 517 DGLCKAEKYQEASSLTKEM--LERGFK-PDIRTYASLIRGLCRDKKVDVALRIWDEILDA 573

Query: 502 GLIPNQTTYQIVREEMMEKG 521
           GL  +   + I+   +   G
Sbjct: 574 GLQVDVMVHNILIHGLCSAG 593



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 216/473 (45%), Gaps = 65/473 (13%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           +++ A+ + + P     AF+      G    V S N LL A V+  ++ D +  +  +  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 180 ----RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
               RRI  NL ++N +L  LC  G +++A  +   ++  GV+P  VTY+ L+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH- 206

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGV 294
              ++  A  +  +M   G+  + V +N L+ G  +      AMKV+E++    G +  +
Sbjct: 207 --DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNL 264

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY  +++GLC  G+  EA  +   MMA+  + + VT   LI+G C+   V+ A  ++ D
Sbjct: 265 ATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSD 324

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS------------------MLDRGVL 396
           + + GL   V  YN+LI  +C+ GR  +A+   +S                  +LD G++
Sbjct: 325 MVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMV 384

Query: 397 -----------------PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
                            PD  T+  LI GL   G       I+ +  N+G    + +Y+ 
Sbjct: 385 SEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444

Query: 440 LVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ++   CKDG++  A    +E++K M K+   PN   YN LI GFC+  K+ DA  +  E+
Sbjct: 445 MINRFCKDGRTHDA----NEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 499 LEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
              G  P   TY                  + +EM+E+GF PDI  +   I G
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 169/309 (54%), Gaps = 4/309 (1%)

Query: 109 SDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           +D+ C  + +    L+    +N   +  FE  + A + G +  V S + ++    K+G+ 
Sbjct: 396 NDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRT 455

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            D   VYK M +   + N   +N ++NG C+  K+N A  I  +M S G  P ++TYN L
Sbjct: 456 HDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL 515

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           IDG CK     K  +A ++ K+M+E G  P+  T+ +LI G C+D+ +  A+++++E+  
Sbjct: 516 IDGLCKA---EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   V+ +N LI+GLC  GK+DEA  +  EM      PN+VT N L++GF +   ++K
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L+  I + GL P ++TYNT I   C   R  +   + N +L  G++P V T++ L+ 
Sbjct: 633 AASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVR 692

Query: 408 GLSREGNVE 416
            + + G ++
Sbjct: 693 AVIKYGPIQ 701



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 120/235 (51%), Gaps = 9/235 (3%)

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           +A +V  ++    L  D  L    A RD     G  P V + N L++ F + +    A  
Sbjct: 84  SAALVVLSAFSRALMPDAAL---AAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADA 140

Query: 351 LFDDISE----QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            F  +S     + ++P++ TYN ++ + C  G ++ A ++ +S+  RGV PD  TY+ L+
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLM 200

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL++   ++   ++++E+ N G++A  V YN L+    + G  +KA+ + +++ +    
Sbjct: 201 SGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGA 260

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              PN+ TY V++ G C+ G+ ++A  + + ++      +  TY I+   +   G
Sbjct: 261 S--PNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 218/409 (53%), Gaps = 11/409 (2%)

Query: 110 DSLCRNSIIIDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D + R+    D+L+  Y+     K  +     E  +R        +  +   ++ +L K+
Sbjct: 33  DKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKD 92

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G       +++EM    I  N+  ++ ++NGLC+ GKL +A ++ ++M S G+   V+TY
Sbjct: 93  GLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITY 152

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LI   C+    G   +A   F  MV  GILP+ VTF TLID   K   +  A K+FE 
Sbjct: 153 NSLIHASCR---FGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFEL 209

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G A  +VTYNSL+NGLC+  ++D AV L + M+  G+K +V++ N LING+C    
Sbjct: 210 MIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGK 269

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            E+A  LF  +  + L+PS+ TY  L+ A  + GR+  A  + N+M   G  P + TY  
Sbjct: 270 TEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTV 329

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ GL + G +E   ++   L +   +  +  Y+IL+G + +  + + A+ + DE+  + 
Sbjct: 330 LLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTV- 388

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
                PNIVTYN++I G C++GKL +A  L  ++ E G   ++ ++  +
Sbjct: 389 --GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFI 435



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 211/407 (51%), Gaps = 20/407 (4%)

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
           F       DSLC++ + I               G + F+   + G+  +V+  + L+  L
Sbjct: 79  FFTYGLVIDSLCKDGLAIK--------------GLKMFREMINMGICPNVIVYSSLINGL 124

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            + GK  +   ++ EM  + I+ N+ ++N +++  C+ G   +A+     M   G+ P V
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           VT+  LID   KKG + + YK   +F+ M++ G  PN VT+N+L++G C    +  A+++
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYK---IFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           FE M   GI   V++YN+LING C  GK +EA+ L  +M    L P++ T   L+    +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +  A+ LF+++   G SPS+ TY  L+D  CK G +E+A  +  S+      P +  
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI G+ +    E    I +E+   G+   +VTYNI++  LCK+GK  +A  L     
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLF---V 418

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +ME+     + +++N +I+GF Q+ +++ A   L  + EK   PN +
Sbjct: 419 QMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDS 465



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 208/394 (52%), Gaps = 8/394 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +    G +  +L    L+ AL K  +      +++ M       N  ++  V++
Sbjct: 28  ALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVID 87

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G   K   +  +M ++G+ P V+ Y+ LI+G C+   +GK+ +A  +F +MV  G
Sbjct: 88  SLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR---VGKLREAVNLFDEMVSQG 144

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I  N +T+N+LI   C+      A + F +M   GI   VVT+ +LI+ L   GK+ EA 
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + + M+  G  PN+VT N+L+NG C    ++ A  LF+ + E+G+   VI+YNTLI+ Y
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  G+ E+A  +   M    + P ++TY  L+  L + G +   + + N +   G    L
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSL 324

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANG 493
            TY +L+  LCK+G  ++A+    ++F+  K  K+ P+I  Y++LI G  Q  + E A  
Sbjct: 325 DTYTVLLDGLCKNGCIEEAI----DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAME 380

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           + +E+   GL+PN  TY I+   + ++G + + E
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 189/341 (55%), Gaps = 6/341 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           NL + + ++ G+C  GK+  A ++ + M   G    ++ Y  LI+   K     +  +A 
Sbjct: 8   NLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTR---QARRAV 64

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M+      N  T+  +ID  CKD      +K+F EM + GI   V+ Y+SLINGL
Sbjct: 65  ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  GKL EAV L DEM++ G+K NV+T N+LI+  C+  L ++A   F  +  +G+ P V
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+ TLID   K+G++++A+ +   M+ +G  P++ TYN L+ GL     ++    +   
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V  G++  +++YN L+   C  GK+++A++L     KM+ E+  P+I TY +L+K   Q
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFR---KMQYEELTPSITTYTILLKALYQ 301

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            G++  A  L N +   G  P+  TY ++ + + + G I +
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 196/398 (49%), Gaps = 9/398 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +C N I+   L+    +  K       F      G+K++V++ N L+ A  + G +++  
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
             + +M    I  ++ +F  +++ L K GK+ +A  I E M   G +P +VTYN L++G 
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C      +M  A  +F+ MVE GI  + +++NTLI+G+C       AM +F +M    + 
Sbjct: 230 CLHH---QMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT 286

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + TY  L+  L  +G++  A  L + M   G  P++ T   L++G CK   +E+A  +
Sbjct: 287 PSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDV 346

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  +      PS+  Y+ LI    +  R E A  + + +   G++P++ TYN +I GL +
Sbjct: 347 FRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCK 406

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-P 470
           EG +     +  ++  +G     +++N ++    ++ + +KA+  L  M    +EK + P
Sbjct: 407 EGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM----REKNFSP 462

Query: 471 NIVTYNVLIKGFCQKGK-LEDANGLLNELLEKGLIPNQ 507
           N     +L+  +    +  E  N  L+EL++K  +  Q
Sbjct: 463 NDSVTLMLVNLYAADAQSSELPNNFLHELVQKKTLKTQ 500



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 38/308 (12%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING------- 303
           +++G  PN VT +TL+ G C +  +  A+++F++M   G    ++ Y  LIN        
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 304 ----------------------------LCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
                                       LC DG   + + +  EM+  G+ PNV+  ++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING C+   + +A  LFD++  QG+  +VITYN+LI A C+ G  ++A    + M+  G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           LPDV T+  LI  LS++G V+    I   ++  G    +VTYN L+  LC   +   AV 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           L + M  +E+  K  ++++YN LI G+C  GK E+A  L  ++  + L P+ TTY I+ +
Sbjct: 241 LFEVM--VERGIKI-DVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 516 EMMEKGFI 523
            + + G I
Sbjct: 298 ALYQNGRI 305


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 221/414 (53%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+ + ++       +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G  P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +GKLD A+ +  ++++ GL P+++T N LI GFCKK  +++ R L D++S +GL
Sbjct: 248 IDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M++  +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY I++   CK+G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKE---MQRDGHVPSVVT 418



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 166/275 (60%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG +P+V T + LING CK+  +++A  LFD++ E+GL P+ +T
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G+++ A  +   +L +G+ PD+ TYN LI G  ++G+++  R++++E+ 
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A     +M  +E+  +  ++V Y  LI G C++G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKM--IEENIRLDDVV-YTALISGLCKEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY IV  E  + G
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNG 395



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 145/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ F     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           ++ L              E++  G   ++   N L++ FCK+  +  A+++FD I++ GL
Sbjct: 108 LDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   G  PDV TY+ LI GL +E  ++    
Sbjct: 168 KPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E++  G+    VT+  L+   CK+GK   A+ +  ++     +   P+++TYN LI 
Sbjct: 228 LFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILS---QGLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           GFC+KG L+    L++E+  KGL P++ TY
Sbjct: 285 GFCKKGDLKQTRDLIDEMSMKGLKPDKITY 314



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 45/269 (16%)

Query: 296 TYNSLINGLCVDGKLDEA-------VALRDEMMASGL-----------KPNVVTSNALIN 337
           +Y ++I+ LC    L EA       V+ + +  AS +           + ++   + LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + +   +  A   F    E        T   ++D   K    +  +     +L+ G   
Sbjct: 75  AYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPA 134

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            +  +N L+    +EG +   + + + +   G++  +V++N L+    K G       +L
Sbjct: 135 SLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG-------IL 187

Query: 458 DEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
           DE F+    M      P++ TY+VLI G C++ K+++A+ L +E+LEKGL+PN  T+   
Sbjct: 188 DEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTL 247

Query: 513 ---------------VREEMMEKGFIPDI 526
                          + ++++ +G  PD+
Sbjct: 248 IDGHCKNGKLDLAMEIYKQILSQGLSPDL 276


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++   L+  L    K  +   +   M +R  + NL ++  V+NGLCK G  + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  M++  +   VV +N +ID  CK   +     A  +FK+M   GI PN VT+++L
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 263

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   +VT+N+LI+    +GK  EA  L D+M+   +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T N+L+NGFC    ++KA+ +F+ +  +   P V+TYNTLI  +CK  R+ED   
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ D  TY  LI GL  +G+ +  + +  ++V++G+   ++TY+IL+  LC
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
            +GK +KA+ + D M K E                     +  W            PN+V
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TYN +I G C K  L++A  LL ++ E G +PN  TY  +    +  G
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 210/394 (53%), Gaps = 24/394 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  N+LL A+ K  KF+ V  + ++M+R  I   L ++N ++N  C+  +++ A  ++
Sbjct: 46  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+ +TF TLI G 
Sbjct: 106 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 162

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + + M   G    +VTY  ++NGLC  G  D A+ L ++M A+ ++ +V
Sbjct: 163 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 222

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+  CK + V+ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + 
Sbjct: 223 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++ + P++ T+N LI    +EG       + ++++   +   + TYN LV   C   +
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 342

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             KA     +MF+ M  +  +P++VTYN LIKGFC+  ++ED   L  E+  +GL+ +  
Sbjct: 343 LDKA----KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 509 TY----------------QIVREEMMEKGFIPDI 526
           TY                Q V ++M+  G  PDI
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 188/356 (52%), Gaps = 17/356 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            +T  DSLC+   + D L L              FK     G++ +V++ + L+  L   
Sbjct: 225 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 270

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G++ D   +  +M  ++I  NL +FN +++   K GK  +A  + +DM    + P + TY
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 330

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N L++G+C      ++ KA  +F+ MV     P+ VT+NTLI GFCK + +    ++F E
Sbjct: 331 NSLVNGFCMHD---RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    VTY +LI GL  DG  D A  +  +M++ G+ P+++T + L++G C    
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +EKA  +FD + +  +   +  Y T+I+  CK G+++D + +  S+  +GV P+V TYN 
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +I+GL  +  ++    ++ ++  +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +++ V+  N ++ +L K    +D   ++KEM+ + I  N+ +++ +++ LC  G+ + AS
Sbjct: 218 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 277

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P +VT+N LID + K+G   K  +A+ ++ DM++  I P+  T+N+L+
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLYDDMIKRSIDPDIFTYNSLV 334

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +GFC  + +  A ++FE M S      VVTYN+LI G C   ++++   L  EM   GL 
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 394

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + VT   LI G       + A+ +F  +   G+ P ++TY+ L+D  C  G++E A  +
Sbjct: 395 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 454

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M    +  D+  Y  +I G+ + G V+   ++   L   G++  +VTYN ++  LC 
Sbjct: 455 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 514

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
               ++A +LL    KM+++   PN  TYN LI+   + G    +  L+ E+     + +
Sbjct: 515 KRLLQEAYALLK---KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 571

Query: 507 QTTYQIV 513
            +T  +V
Sbjct: 572 ASTIGLV 578



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 162/305 (53%), Gaps = 39/305 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++++ N L+ A VKEGKF + E +Y +M +R I+ ++ ++N ++NG C   +L+KA 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P VVTYN LI G+CK     ++     +F++M   G++ + VT+ TLI
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            G   D +   A KVF++M S G+   ++TY+ L++GLC +GKL++A+ + D M  S   
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
                                           G+KPNVVT N +I+G C K+L+++A  L
Sbjct: 465 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G  P+  TYNTLI A+ ++G    +  +   M     + D ST   L+A +  
Sbjct: 525 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 583

Query: 412 EGNVE 416
           +G ++
Sbjct: 584 DGRLD 588



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 38/259 (14%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
              ++G   Y  ++     D KLD+A+ L   M+ S   P++V  N L++   K K  + 
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 65

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEG----------------------------- 378
              L + +    +   + TYN LI+ +C+                               
Sbjct: 66  VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 125

Query: 379 ------RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
                 R+ DA A+ + M++ G  PD  T+  LI GL           +++ +V  G + 
Sbjct: 126 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 185

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            LVTY ++V  LCK G +  A++LL+   KME  K   ++V +N +I   C+   ++DA 
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242

Query: 493 GLLNELLEKGLIPNQTTYQ 511
            L  E+  KG+ PN  TY 
Sbjct: 243 NLFKEMETKGIRPNVVTYS 261


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 240/465 (51%), Gaps = 45/465 (9%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +  F KNG+       +  +      L  +   +  ++  ++K  K     + F  + +
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLG--LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL ++V  CN +L  L K+GK ++   +  +M+ R I  N+ S+N V+ G C+   ++ 
Sbjct: 438 TGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDG---------------------------------- 230
           A  +  ++   G+ P   TY+ILIDG                                  
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556

Query: 231 -YCKKGGIGKMYKADAVFKDMVENGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
             CK   +G+  KA  +  +M+E   L  + +++N++IDGF K+  + +A+  +EEM  +
Sbjct: 557 GLCK---VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI+  V+TY SL+NGLC + ++D+A+ +RDEM   G+K ++    ALI+GFCK+  +E A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LF ++ E+GL+PS   YN+LI  +   G M  A  +   ML  G+  D+ TY  LI G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L ++GN+     +  E+   G+    + Y ++V  L K G+  K V + +E   M+K   
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE---MKKNNV 790

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            PN++ YN +I G  ++G L++A  L +E+L+KG++P+  T+ I+
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 246/530 (46%), Gaps = 84/530 (15%)

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
           +K+ +  H++ +  ++L  L V   +P +   L   V+    T    ++  +   +  + 
Sbjct: 174 SKDRQTDHAVDIVNQMLE-LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM--VAIGVD 230

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS-------SVLSC---------NQL 157
            +++   +LM A ++  KP    E   RA + G +        +V +C         N L
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290

Query: 158 LR--------------------ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           LR                    A VK+G  +D   +  EM    I +N+ +   ++ G C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K   L  A  + + M+  G SP  VT+++LI+ + K G   +M KA   +K M   G+ P
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG---EMEKALEFYKKMEVLGLTP 407

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +    +T+I G+ K +    A+K+F+E    G+A  V   N++++ LC  GK DEA  L 
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELL 466

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID----- 372
            +M + G+ PNVV+ N ++ G C++K ++ AR++F +I E+GL P+  TY+ LID     
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526

Query: 373 ------------------------------AYCKEGRMEDAFAMRNSMLDRGVL-PDVST 401
                                           CK G+   A  +  +M++   L     +
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN +I G  +EG ++       E+  NG+   ++TY  L+  LCK+ +  +A+ + DEM 
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM- 645

Query: 462 KMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              K K    +I  Y  LI GFC++  +E A+ L +ELLE+GL P+Q  Y
Sbjct: 646 ---KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 164/270 (60%), Gaps = 5/270 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S +S N ++    KEG+ +     Y+EM    I  N+ ++  ++NGLCK  ++++A ++ 
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++MK+ GV   +  Y  LIDG+CK+     M  A A+F +++E G+ P++  +N+LI GF
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSN---MESASALFSELLEEGLNPSQPIYNSLISGF 699

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
               N+ AA+ ++++M   G+   + TY +LI+GL  DG L  A  L  EM A GL P+ 
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +    ++NG  KK    K   +F+++ +  ++P+V+ YN +I  + +EG +++AF + + 
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           MLD+G+LPD +T++ L++G  + GN++ VR
Sbjct: 820 MLDKGILPDGATFDILVSG--QVGNLQPVR 847



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 49/498 (9%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK-YP 80
           +K +  D  +VI  L N   +P   LR++ W+     +     +   L+H LV + + Y 
Sbjct: 65  AKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYG 124

Query: 81  KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           +    L  +V     T ++++   +S   DS                       GFE   
Sbjct: 125 RASDLLIRYVSTSNPTPMASVL--VSKLVDS-------------------AKSFGFEVNS 163

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF----NFVLNGL 196
           RA +Y           LL A  K+ + +    +  +M    +EL++  F    N  L+ L
Sbjct: 164 RAFNY-----------LLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYVNRTLSAL 208

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            +   L +A ++   M ++GV    VT  +L+    ++    K  +A  V    +E G  
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREE---KPAEALEVLSRAIERGAE 265

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI-AAGVVTYNSLINGLCVDGKLDEAVA 315
           P+ + ++  +   CK  +++ A  +  EM    +      TY S+I      G +D+A+ 
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L+DEM++ G+  NVV + +LI G CK   +  A VLFD + ++G SP+ +T++ LI+ + 
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ME A      M   G+ P V   + +I G  +    E    + +E    G+ A + 
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 444

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
             N ++  LCK GK+ +A  LL    KME     PN+V+YN ++ G C++  ++ A  + 
Sbjct: 445 VCNTILSWLCKQGKTDEATELLS---KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501

Query: 496 NELLEKGLIPNQTTYQIV 513
           + +LEKGL PN  TY I+
Sbjct: 502 SNILEKGLKPNNYTYSIL 519



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC + +  + ++  + K  +      A++     G+  +V++   L+  L K  + +   
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EMK + ++L++ ++  +++G CK   +  AS +  ++   G++P    YN LI G+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                +G M  A  ++K M+++G+  +  T+ TLIDG  KD N+  A +++ EM + G+ 
Sbjct: 700 ---RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              + Y  ++NGL   G+  + V + +EM  + + PNV+  NA+I G  ++  +++A  L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816

Query: 352 FDDISEQGLSPSVITYNTLI 371
            D++ ++G+ P   T++ L+
Sbjct: 817 HDEMLDKGILPDGATFDILV 836



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 4/243 (1%)

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           K+ +   S G       +N L+N    D + D AV + ++M+   + P     N  ++  
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            ++  + +A+ L+  +   G+    +T   L+ A  +E +  +A  + +  ++RG  PD 
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLD 458
             Y+  +    +  ++    +++ E+    +      TY  ++ A  K G    A+ L D
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           EM     +    N+V    LI G C+   L  A  L +++ ++G  PN  T+ ++ E   
Sbjct: 329 EMLS---DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385

Query: 519 EKG 521
           + G
Sbjct: 386 KNG 388



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 50/97 (51%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  E +      GL    +    ++  L K+G+F  V  +++EMK+  +  N+  +N V+
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
            G  + G L++A  + ++M   G+ P   T++IL+ G
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 206/369 (55%), Gaps = 6/369 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+R L   G+  +   V  EM RRR   ++ ++  +L   CK     +A  ++++M+ 
Sbjct: 162 NTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 221

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P +VTYN++++G C++G   ++  A    K++   G  PN V++N ++ G C  E 
Sbjct: 222 KGCTPDIVTYNVVVNGICQEG---RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A ++  EMG  G    VVT+N LI+ LC  G ++ A+ + +++   G  PN ++ N 
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+K ++KA    D +  +G  P +++YNTL+ A C+ G ++ A  + + + D+G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P + +YN +I GL++ G  +    ++NE+V+ G++  ++TY+ +   LC++ + + A+
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                  K++     PN V YN +I G C++ +   A  L   ++  G +PN++TY I+ 
Sbjct: 459 RAFG---KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 515 EEMMEKGFI 523
           E +  +G I
Sbjct: 516 EGLAYEGLI 524



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 203/363 (55%), Gaps = 9/363 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N ++      G+ +    +  EM    +E +  ++N ++ GLC  G+   A  +++
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M      P VVTY IL++  CK+ G  +  K   +  +M + G  P+ VT+N +++G C
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMK---LLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +  A++  + + S+G     V+YN ++ GLC   + ++A  L  EM   G  PNVV
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+  C+K LVE A  + + I + G +P+ ++YN L+ A+CK+ +M+ A A  + M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + RG  PD+ +YN L+  L R G V+    ++++L + G    L++YN ++  L K GK+
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           K+A+ LL+EM     +   P+I+TY+ +  G C++ ++EDA     ++ + G+ PN   Y
Sbjct: 420 KEALELLNEMV---SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 511 QIV 513
             +
Sbjct: 477 NAI 479



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 203/373 (54%), Gaps = 15/373 (4%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++   LL A  K   ++    +  EM+ +    ++ ++N V+NG+C+ G+++ A + ++
Sbjct: 193 VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK 252

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           ++ S G  P  V+YNI++ G C      +   A+ +  +M + G  PN VTFN LI   C
Sbjct: 253 NLPSYGCEPNTVSYNIVLKGLCTAE---RWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 309

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   +  A++V E++  +G     ++YN L++  C   K+D+A+A  D M++ G  P++V
Sbjct: 310 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 369

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           + N L+   C+   V+ A  L   + ++G +P +I+YNT+ID   K G+ ++A  + N M
Sbjct: 370 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + +G+ PD+ TY+ + AGL RE  +E       ++ + G+R   V YN ++  LCK  ++
Sbjct: 430 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 489

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A+ L   M         PN  TY +LI+G   +G +++A  LL+EL  +G        
Sbjct: 490 HSAIDLFAYMI---GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG-------- 538

Query: 511 QIVREEMMEKGFI 523
            +VR+ ++ KG I
Sbjct: 539 -VVRKSLINKGAI 550



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 198/374 (52%), Gaps = 16/374 (4%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  L++ L   G+  +   V           ++ ++N ++ G C AG+L+ A  ++ +M
Sbjct: 98  TCAALIKKLSASGRTAEARRVLAACGP-----DVMAYNAMVAGYCGAGQLDAARRLVAEM 152

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
               V P   TYN LI G C   G G+   A AV  +M+    +P+ VT+  L++  CK 
Sbjct: 153 P---VEPDAYTYNTLIRGLC---GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 206

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
                AMK+ +EM   G    +VTYN ++NG+C +G++D+A+     + + G +PN V+ 
Sbjct: 207 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 266

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N ++ G C  +  E A  L  ++ ++G  P+V+T+N LI   C++G +E A  +   +  
Sbjct: 267 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 326

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P+  +YN L+    ++  ++     ++ +V+ G    +V+YN L+ ALC+ G+   
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386

Query: 453 AVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           AV LL ++    K+K   P +++YN +I G  + GK ++A  LLNE++ KGL P+  TY 
Sbjct: 387 AVELLHQL----KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 442

Query: 512 IVREEMMEKGFIPD 525
            +   +  +  I D
Sbjct: 443 TIAAGLCREDRIED 456



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 3/317 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    +++ N ++  + +EG+ +D     K +     E N  S+N VL GLC A +  
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++M +M   G  P VVT+N+LI   C+KG +     A  V + + + G  PN +++N
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYN 337

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+  FCK + +  AM   + M S G    +V+YN+L+  LC  G++D AV L  ++   
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P +++ N +I+G  K    ++A  L +++  +GL P +ITY+T+    C+E R+EDA
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 + D G+ P+   YN +I GL +        ++   ++ NG      TY IL+  
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517

Query: 444 LCKDGKSKKAVSLLDEM 460
           L  +G  K+A  LLDE+
Sbjct: 518 LAYEGLIKEARDLLDEL 534



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 166/296 (56%), Gaps = 3/296 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    YG + + +S N +L+ L    ++ED E +  EM ++    N+ +FN +++
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A +++E +   G +P  ++YN L+  +CK+    KM KA A    MV  G
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ---KKMDKAMAFLDLMVSRG 363

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C+   +  A+++  ++   G A  +++YN++I+GL   GK  EA+
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM++ GL+P+++T + +  G C++  +E A   F  + + G+ P+ + YN +I   
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           CK      A  +   M+  G +P+ STY  LI GL+ EG ++  R++++EL + G+
Sbjct: 484 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 3/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E  ++   YG   + LS N LL A  K+ K +      
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    ++ S+N +L  LC++G+++ A +++  +K  G +P +++YN +IDG  K 
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +MV  G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 417 ---GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN++I GLC   +   A+ L   M+ +G  PN  T   LI G   + L+++AR L D+
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533

Query: 355 ISEQGL 360
           +  +G+
Sbjct: 534 LCSRGV 539



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 15/206 (7%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+LDEA+ L    + S  +P+  T  ALI          +AR +          P V+ Y
Sbjct: 79  GELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAY 129

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N ++  YC  G+++   A R  + +  V PD  TYN LI GL   G       +++E++ 
Sbjct: 130 NAMVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 +VTY IL+ A CK    K+A+ LLDE   M  +   P+IVTYNV++ G CQ+G+
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDE---MRDKGCTPDIVTYNVVVNGICQEGR 243

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIV 513
           ++DA   L  L   G  PN  +Y IV
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIV 269



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 26/234 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH+    KK  K  +FL + V  G +  + + ++ L T   +LCR+  +          
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS-YNTLLT---ALCRSGEV---------- 384

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                +  E   +  D G    ++S N ++  L K GK ++   +  EM  + ++ ++ +
Sbjct: 385 ----DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 440

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ +  GLC+  ++  A      ++ +G+ P  V YN +I G CK+    + + A  +F 
Sbjct: 441 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR---RETHSAIDLFA 497

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
            M+ NG +PNE T+  LI+G   +  I  A  + +E+ S G     V   SLIN
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG-----VVRKSLIN 546



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 11/164 (6%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   T   LI      GR  +A   R  +   G  PDV  YN ++AG    G ++  R +
Sbjct: 94  PDAGTCAALIKKLSASGRTAEA---RRVLAACG--PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+    +     TYN L+  LC  G++  A+++LDEM +    +  P++VTY +L++ 
Sbjct: 149 VAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR---RRCVPDVVTYTILLEA 202

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            C++   + A  LL+E+ +KG  P+  TY +V   + ++G + D
Sbjct: 203 TCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G+ +    +  +M++ +IE ++  ++ V++ LCK   ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+ P V TY+ LI   C     G+   A  +  DM+E  I PN VTFN+L
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCN---YGRWSDASRLLSDMLERKINPNVVTFNSL 316

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+F+EM    I   +VTYNSLING C+  +LDEA  +   M++   
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LINGFCK K V     LF D+S +GL  + +TY TLI  + +    ++A  
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV P++ TYN L+ GL + G +E    +   L  + M   + TYNI+   +C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   P+++ YN +I GFC+KG  E+A  L  ++ E G +P
Sbjct: 497 KAGKVEDGWDLF---CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553

Query: 506 NQTTYQIVREEMMEKG 521
           +  TY  +    +  G
Sbjct: 554 DSGTYNTLIRAHLRDG 569



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 210/394 (53%), Gaps = 24/394 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  KF+ V    ++M+   +  NL ++N ++N LC+  +L+ A  I+
Sbjct: 64  SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT N L++G+C    I    +A A+   MVE G  P+ VTF TL+ G 
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRIS---EAVALVDQMVEMGYQPDTVTFTTLVHGL 180

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +    S A+ + E M   G    +VTY ++INGLC  G+ D A+ L ++M    ++ +V
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  + +I+  CK + V+ A  LF ++  +G+ P V TY++LI   C  GR  DA  + + 
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML+R + P+V T+N LI   ++EG +     + +E++   +   +VTYN L+   C   +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360

Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A     ++F +   K   P++VTYN LI GFC+  K+ D   L  ++  +GL+ N  
Sbjct: 361 LDEA----QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416

Query: 509 TY----------------QIVREEMMEKGFIPDI 526
           TY                Q+V ++M+  G  P+I
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 217/400 (54%), Gaps = 10/400 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +P L      +     +++ V+  + ++ +L K    +D   ++ EM  + I  ++ 
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +++ +++ LC  G+ + AS ++ DM    ++P VVT+N LID + K+G   K+ +A+ +F
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG---KLIEAEKLF 333

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M++  I PN VT+N+LI+GFC  + +  A ++F  M S      VVTYN+LING C  
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K+ + + L  +M   GL  N VT   LI+GF +    + A+++F  +   G+ P+++TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NTL+D  CK G++E A  +   +    + PD+ TYN +  G+ + G VE   ++   L  
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  ++ YN ++   CK G  ++A +L     KM+++   P+  TYN LI+   + G 
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLF---IKMKEDGPLPDSGTYNTLIRAHLRDGD 570

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEM----MEKGFI 523
              +  L+ E+       + +TY +V + +    ++KGF+
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFL 610



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 189/355 (53%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  DSLC+   + D L L              F    + G++  V + + L+  L   G
Sbjct: 244 STVIDSLCKYRHVDDALNL--------------FTEMDNKGIRPDVFTYSSLISCLCNYG 289

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++ D   +  +M  R+I  N+ +FN +++   K GKL +A  + ++M    + P +VTYN
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI+G+C      ++ +A  +F  MV    LP+ VT+NTLI+GFCK + +   M++F +M
Sbjct: 350 SLINGFCMHD---RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    VTY +LI+G       D A  +  +M++ G+ PN++T N L++G CK   +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA V+F+ + +  + P + TYN + +  CK G++ED + +  S+  +GV PDV  YN +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+G  ++G  E    +  ++  +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 193/345 (55%), Gaps = 6/345 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K ++   ++ EM + R   ++  F+ +L+ + K  K +      E M+ LGVS  + TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I+I+  C++    ++  A A+   M++ G  P+ VT N+L++GFC    IS A+ + ++M
Sbjct: 105 IMINCLCRRS---QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G     VT+ +L++GL    K  EAVAL + M+  G +P++VT  A+ING CK+   
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           + A  L + + +  +   V+ Y+T+ID+ CK   ++DA  +   M ++G+ PDV TY+ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I+ L   G       ++++++   +   +VT+N L+ A  K+GK  +A  L DEM +   
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +   PNIVTYN LI GFC   +L++A  +   ++ K  +P+  TY
Sbjct: 342 D---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S+++ N LL       +  +   +  +M     + +  +F  +++GL +  K ++A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E M   G  P +VTY  +I+G CK+G   +   A  +   M +  I  + V ++T+
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRG---EPDLALNLLNKMEKGKIEADVVIYSTV 246

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK  ++  A+ +F EM + GI   V TY+SLI+ LC  G+  +A  L  +M+   +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N+LI+ F K+  + +A  LFD++ ++ + P+++TYN+LI+ +C   R+++A  
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+ +  LPDV TYN LI G  +   V     +  ++   G+    VTY  L+    
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +      A  +  +M     +   PNI+TYN L+ G C+ GKLE A  +   L +  + P
Sbjct: 427 QASDCDNAQMVFKQMVS---DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483

Query: 506 NQTTYQIVREEMMEKGFIPD 525
           +  TY I+ E M + G + D
Sbjct: 484 DIYTYNIMSEGMCKAGKVED 503



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ +A  +F +MV++   P+ V F+ L+    K +     +   E+M   G++  + TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +IN LC   +L  A+A+  +MM  G  P++VT N+L+NGFC    + +A  L D + E 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P  +T+ TL+    +  +  +A A+   M+ +G  PD+ TY  +I GL + G  +  
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N++N++    + A +V Y+ ++ +LCK      A++L  EM   + +   P++ TY+ L
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM---DNKGIRPDVFTYSSL 281

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I   C  G+  DA+ LL+++LE+ + PN  T+  + +   ++G + + E
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 6/405 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S ++   S+ +  LM  + K+ +      A +     GL     +C  ++  L K+ ++ 
Sbjct: 376 SKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYH 435

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
                 K M  R    +      ++ GLCK GK  +A+++   +   G     VT N LI
Sbjct: 436 SAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 495

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G C   G GK+ +A  + K+M+E G+  + +T+N LI GFC +  +    ++ EEM   
Sbjct: 496 HGLC---GAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   + TYN L+ GLC  GKLD+A+ L DE  ASGL  N+ T   ++ G+CK   +E  
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LF+++  + +  + I YN +I A+C+ G +  A  +  +M  +G+LP+ +TY+ LI G
Sbjct: 613 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           +   G VE  +++++E+   G    +V Y  L+G  CK G+   A S   EM        
Sbjct: 673 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH-- 730

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            PN  TY V+I G+C+ G +E AN LL ++ E G++P+  TY ++
Sbjct: 731 -PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 249/519 (47%), Gaps = 67/519 (12%)

Query: 74  VVAKK--YPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++A+K  +P +++    L   VK  +F     +F  +S   +  C +      ++ A  K
Sbjct: 199 LLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS---EGACPDVFSFTNVINALCK 255

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K     E F +    G+  +V++ N ++  L + G+ ++   + ++M  + ++ NL +
Sbjct: 256 GGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKT 315

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  ++NGL K    +K + ++++M   G +P VV +N LIDGYCK G I    K   V  
Sbjct: 316 YGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV-- 373

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA------GVVTY----- 297
            M+   I P  VT  +L+ GFCK + I  A    EE+ S G++        VV +     
Sbjct: 374 -MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 432

Query: 298 ------------------------NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
                                     L+ GLC DGK  EA  L   ++  G   + VTSN
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 334 ALINGFC-KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           ALI+G C   KL E +R++  ++ E+GL    ITYN LI  +C EG++E  F +R  M  
Sbjct: 493 ALIHGLCGAGKLPEASRIV-KEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG+ PD+ TYN L+ GL   G ++    + +E   +G+ + + TY I++   CK  + + 
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-- 510
             +L +E+   + E    N + YN++IK  CQ G +  A  LL  +  KG++PN  TY  
Sbjct: 612 VENLFNELLSKKMEL---NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 511 --------------QIVREEMMEKGFIPDIEGHMYNISG 535
                         + + +EM ++GF+P++  +   I G
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 247/555 (44%), Gaps = 81/555 (14%)

Query: 35  QLFNS---DADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL----- 86
           QLF S    A+P+  L +F +++   +   ++     L+  L+ +K  P  R  L     
Sbjct: 78  QLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPARLLLIRLID 137

Query: 87  -------------HMFVKNGKF--TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
                        H+ + N  F  TSV   F                 D+L+  Y    +
Sbjct: 138 GNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQA-----------FDLLIHVYSTQFR 186

Query: 132 PHLGF----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            +LGF    + F      G   S+ +CN LL +LVK  +FE    V++ M       ++ 
Sbjct: 187 -NLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVF 244

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           SF  V+N LCK GK+  A ++   M+ LG+SP VVTYN +I+G C+ G +   ++     
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK--- 301

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + M   G+ PN  T+  LI+G  K         V +EM   G    VV +N+LI+G C  
Sbjct: 302 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKM 361

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS------ 361
           G ++ A+ ++D M++  + P  VT  +L+ GFCK   +E A    ++I   GLS      
Sbjct: 362 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 421

Query: 362 -----------------------------PSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
                                        PS +    L+   CK+G+  +A  +   +L+
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 481

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G      T N LI GL   G +     I+ E++  G+    +TYN L+   C +GK + 
Sbjct: 482 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 541

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
              L +EM K   +   P+I TYN L++G C  GKL+DA  L +E    GLI N  TY I
Sbjct: 542 CFRLREEMTKRGIQ---PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598

Query: 513 VREEMMEKGFIPDIE 527
           + E   +   I D+E
Sbjct: 599 MMEGYCKANRIEDVE 613



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +++ ML+    K+ K     E + R  + G  +S ++ N L+  L   GK  +   + KE
Sbjct: 454 LLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKE 513

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R + ++  ++N ++ G C  GK+     + E+M   G+ P + TYN L+ G C    
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN--- 570

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +GK+  A  ++ +   +G++ N  T+  +++G+CK   I     +F E+ S  +    + 
Sbjct: 571 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 630

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN +I   C +G +  A+ L + M + G+ PN  T ++LI+G C   LVE A+ L D++ 
Sbjct: 631 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 690

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G  P+V+ Y  LI  YCK G+M+ A +    M+   + P+  TY  +I G  + GN+E
Sbjct: 691 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 750

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++ ++  +G+   +VTYN+L    CK      A  + D+   M  E    + +TY 
Sbjct: 751 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ---MATEGLPVDEITYT 807

Query: 477 VLIKGF 482
            L+ G+
Sbjct: 808 TLVHGW 813


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 264/556 (47%), Gaps = 71/556 (12%)

Query: 6   NSTIEDITELIRNH-HWSK-LKNTDPNTVILQ------LFNSDADPVLILRYFCWSTKEL 57
           N+ ++DI E++  H  W + L+     + +L       + +   D  L L++F W +   
Sbjct: 28  NNLVKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVS--- 84

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI 117
           R  +S  + G    SL+      ++ S + + ++N +   +S    A+S    +   + +
Sbjct: 85  RGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGL 144

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           +   L L Y   +K +  F              V++CN LL  LVK G+ E    +Y EM
Sbjct: 145 VEKALELYYFV-LKTYTYF------------PDVIACNSLLNMLVKLGRIEIARKLYDEM 191

Query: 178 KRRRIELN------LDSFN--FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
               +E++      +D+++   ++ GLCK GKL +   ++ED    G  P ++ YN LID
Sbjct: 192 ----LEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLID 247

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           GYCKKG    M  A+ +F ++   G LP   T+  +I+GFCK  +  A  ++  EM S G
Sbjct: 248 GYCKKG---DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   V  YN++I+     G + +AV   + M+  G KP++VT N LI+G C+   V +A 
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L +    +GL P+  +Y  LI AYCK+G  + A      M +RG  PD+ TY  L+ GL
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------- 460
              G V+    I  +++  G+      YNIL+  LCK  K   A  LL EM         
Sbjct: 425 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA 484

Query: 461 ----------------------FKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                                 F++  EK   P IV YN +IKG+C+ G ++DA   +N 
Sbjct: 485 FVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINR 544

Query: 498 LLEKGLIPNQTTYQIV 513
           + ++ L P++ TY  V
Sbjct: 545 MKKRHLAPDEFTYSTV 560



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 214/431 (49%), Gaps = 41/431 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + L+  Y K     +    F      G   +V +   ++    K+G F+ ++ + 
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLL 297

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  R + +N+  +N +++   K G + KA + +E M   G  P +VTYN LI G C+ 
Sbjct: 298 MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 357

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   K+ +AD + +  +  G++PN+ ++  LI  +CK      A     EM   G    +
Sbjct: 358 G---KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 414

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK------KLV--- 345
           VTY +L++GL V G++D A+ +R++M+  G+ P+    N L++G CKK      KL+   
Sbjct: 415 VTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAE 474

Query: 346 --------------------------EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                                     ++AR LF+   E+G++P ++ YN +I  YCK G 
Sbjct: 475 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 534

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M+DA A  N M  R + PD  TY+ +I G  ++ +++G + +  E+V    +  +VTY  
Sbjct: 535 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTS 594

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+   C+ G   +++ +  EM   +     PN+VTY++LI  FC++ KL DA     E+L
Sbjct: 595 LINGFCRKGDLHRSLKIFREM---QACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML 651

Query: 500 EKGLIPNQTTY 510
               +PN  T+
Sbjct: 652 MNKCVPNDVTF 662



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 176/361 (48%), Gaps = 22/361 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+   ++ G  ++   +++    + +   +  +N ++ G CK G +  A   +  MK   
Sbjct: 490 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 549

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           ++P   TY+ +IDGY K+  +     A  +F++MV+    PN VT+ +LI+GFC+  ++ 
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDG---AQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH 606

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            ++K+F EM + G+   VVTY+ LI   C + KL +A +  +EM+ +   PN VT N L+
Sbjct: 607 RSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLV 666

Query: 337 NGFCK---KKLVEKARVL-----------FDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           NGF K   + + EK               F  +   G +P    YN+++   C+ G    
Sbjct: 667 NGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRT 726

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N M  +G +PD  ++  L+ G+  EG  +  +NI++  +N       V Y+ ++ 
Sbjct: 727 ALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILD 786

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                G S+ +V +L  MF   +E +  + V  N+ +  F  +  L D    +  LL  G
Sbjct: 787 QYLPQGTSEASV-ILQTMF---EECQSHSKVGDNIQV-SFSNQLYLHDTKAGVTLLLRNG 841

Query: 503 L 503
           L
Sbjct: 842 L 842


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 228/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   + + + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C  G++D A+ +   M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++  +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M++ 
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKE---MQRN 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 165/279 (59%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+  T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK+GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+V
Sbjct: 250 FTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMV 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+     TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CKK  V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)

Query: 332 SNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNS 389
           + +LI     +K    A  +F  I E +G   S +  ++ LI AY + G + DA      
Sbjct: 38  AKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRL 97

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             +  +     T   ++  L +    + V     E++  G  A L  +NIL+   CKDG 
Sbjct: 98  TREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD 157

Query: 450 SKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            + A S+ D +       KW   P++V+YN L+ G+ + G L++   L + +L  G+ P+
Sbjct: 158 IRVAQSVFDAI------TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211

Query: 507 QTTYQI----------------VREEMMEKGFIPD-------IEGH 529
             TY +                + +EM+ KG +P+       I+GH
Sbjct: 212 XYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 214/421 (50%), Gaps = 41/421 (9%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A VK     +G E        G++ +V   N L+  L +E +  D E ++ EM    +  
Sbjct: 185 AAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVG 244

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ ++N +++G CK G+L+ A  + E MK   V+P ++T+N L+ G CK   + KM +A 
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCK---MRKMKEAR 301

Query: 245 AVFKDMVENGILPNEVTFNTLID-----------------------------------GF 269
           ++ K+M  NG +P+  T++ L D                                   G 
Sbjct: 302 SLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGL 361

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   +  A ++ ++   +G+ A  V YN+ +NG C  G +++A+   + M + GL+PN 
Sbjct: 362 CKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNS 421

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +T N+LI+ FC  K ++KA      ++E+G++PSV TYNTLID Y K    +  F +   
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M + GV P+V +Y  LI  L ++G +     ++ +++  G+      YN+L+   C  GK
Sbjct: 482 MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            K A+   DEM + E     P +VTYNVLI G C+KGKL +A   L ++   G  P+  T
Sbjct: 542 VKDALRFFDEMMRSEIS---PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598

Query: 510 Y 510
           Y
Sbjct: 599 Y 599



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 235/461 (50%), Gaps = 35/461 (7%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFT---SVSTIFHALSTCSDS 111
           KE   + +++    LL  L   +K  + RS L     NG      + S +F  L  C D 
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
                                +   E +++A + G++ +  + + LL  L K+GK E  E
Sbjct: 333 ---------------------NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAE 371

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + K+     +  +   +N  +NG C+ G +NKA   +E M+S G+ P  +T+N LID +
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C    + +M KA+   K M E G+ P+  T+NTLIDG+ K        ++ E+M   G+ 
Sbjct: 432 CD---MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK 488

Query: 292 AGVVTYNSLINGLCVDGKLDEA-VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
             VV+Y SLIN LC DGK+ EA + LRD M+  G+ PN    N LI+G C    V+ A  
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRD-MICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            FD++    +SP+++TYN LID  CK+G++ +A      +   G  PDV TYN LI+G +
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYA 607

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKW 469
             GNV     +   + N G++  + TY+ L+      G SK+ + L+++++ +M +    
Sbjct: 608 NAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS-----GCSKEGIELVEKLYNEMLQMNLL 662

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           P+ V YN +I  + + G  + A  L   +L++G+ P++ TY
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTY 703



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 232/519 (44%), Gaps = 78/519 (15%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           + +    F+S S +F   S CS  L     + DML+    K+       E ++     G 
Sbjct: 80  LILTKSTFSSPSDLFSCFSACSIPL--RITLSDMLLSVCCKSKMLREAVELYEFMRRDGK 137

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
             S++S + L   LV E +F  V  ++ E++      +   +   +    K   L    +
Sbjct: 138 LPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGME 197

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            ++ M+  GV P V  YN+LI G C++    ++  A+ +F +M    ++ + VT+NTLID
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCRE---KRIRDAEKMFDEMCNINLVGSIVTYNTLID 254

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+CK   + AA K+ E M    +A  ++T+NSL++GLC   K+ EA +L  EM  +G  P
Sbjct: 255 GYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMP 314

Query: 328 -----------------------------------NVVTSNALINGFCKKKLVEKARVLF 352
                                              N  T + L+NG CK+  VEKA  + 
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDA---------FAMR------NSMLD----- 392
              +E GL    + YNT ++ YC+ G M  A         F +R      NS++D     
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM 434

Query: 393 ---------------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
                          +GV P V TYN LI G  +    +    I+ ++   G++  +V+Y
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSY 494

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+  LCKDGK  +A  +L +M         PN   YN+LI G C  GK++DA    +E
Sbjct: 495 GSLINCLCKDGKILEAEIVLRDMI---CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           ++   + P   TY ++ + + +KG + + E  +  I+ +
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSS 590



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 175/336 (52%), Gaps = 4/336 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+  ++  + G+K +V+S   L+  L K+GK  + E V ++M  R +  N   +N +++G
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG 535

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            C  GK+  A    ++M    +SP +VTYN+LIDG CKKG   K+ +A+     +  +G 
Sbjct: 536 SCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG---KLTEAEDFLTQITSSGH 592

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ +T+N+LI G+    N+S  + ++E M + GI   V TY+ LI+G   +G ++    
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEK 651

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM+   L P+ V  NA+I+ + +    +KA  L   + +QG+ P  +TYN+LI  + 
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +EG++ +   + N+M  + + P   TY+ L+ G     +  G      E+V N       
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
             N L   L ++G+ ++   +  EM        WP+
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPS 807


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 231/442 (52%), Gaps = 17/442 (3%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           L  L  A  +PK R F+ +++      S + +       + +L R + ++  +++ + +N
Sbjct: 118 LSFLYWAIGFPKFRHFMRLYI-----VSATALIG-----NKNLERANEVMQCMVMNFAEN 167

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K            + GL  S  + N +L   V  G  E  E ++ EM +R +  +  SF
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++   C  G++ +A   +  M   G      T  ++ID +C+KG + ++      F  
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV---GYFWK 284

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MVE G+ PN + F  LI+G CK  +I  A ++ EEM   G    V T+ +LI+GLC  G 
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 310 LDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            ++A  L  +++ S G KPNV T  A+ING+CK+  + +A +L   + EQGL P+  TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID +CK G    A+ + + M   G  P++ TYN +I GL ++G+++    ++N++  +
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++A  VTY IL+   C+   + +++   ++M K+      P+I +Y  LI  FC++ ++
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT---PDIHSYTTLISXFCRQKQM 521

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           +++  L  E +  GLIP + TY
Sbjct: 522 KESERLFEEAVSLGLIPTKKTY 543



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 7/369 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  ++ A  ++G    V   + +M    +  N+ +F  ++NGLCK G + +A +++E+M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCK 271
              G  P V T+  LIDG CKKG   K ++   +F  +V  +G  PN  T+  +I+G+CK
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFR---LFLKLVRSDGYKPNVHTYTAMINGYCK 377

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           ++ ++ A  +   M   G+     TY +LI+G C  G    A  L D M   G  PN+ T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            NA+I+G CKK  +++A  L + +S  GL    +TY  L+  +C++     +    N ML
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  PD+ +Y  LI+   R+  ++    +  E V+ G+     TY  ++   C+ G + 
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            AV L     +M      P+ +TY  LI G C++ KL+DA  L + +++KGL P + T  
Sbjct: 558 LAVKLFQ---RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 512 IVREEMMEK 520
            +  E  +K
Sbjct: 615 TLAYEYCKK 623



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 208/407 (51%), Gaps = 45/407 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + GL  +V++   L+  L K+G  +    + +EM RR  + N+ +   +++GLCK
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 199 AGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G   KA  + ++ ++S G  P V TY  +I+GYCK+    K+ +A+ +   M E G++P
Sbjct: 342 KGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED---KLNRAEMLLSRMQEQGLVP 398

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+ TLIDG CK  N   A ++ + MG  G +  + TYN++I+GLC  G LDEA  L 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 318 -----------------------------------DEMMASGLKPNVVTSNALINGFCKK 342
                                              ++M+  G  P++ +   LI+ FC++
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQ 518

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           K ++++  LF++    GL P+  TY ++I  YC+ G    A  +   M + G  PD  TY
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             LI+GL +E  ++  RN+ + +++ G+    VT   L    CK   S  A+++LD +  
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL-- 636

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             ++++W  I T N L++  C +GKL+ A    ++LL+K    N+ T
Sbjct: 637 --EKRQW--IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GKL +A +++ +M++ G+     T N ++D      G+G +  A+ +F +M + G+ P+ 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLD---VAVGMGLVEIAENMFVEMCQRGVSPDC 224

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           V+F  ++   C    +  A K    M   G      T   +I+  C  G ++  V    +
Sbjct: 225 VSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  GL PNV+   ALING CK+  +++A  L +++  +G  P+V T+ TLID  CK+G 
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 380 MEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            E AF +   ++   G  P+V TY  +I G  +E  +     +++ +   G+     TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   CK G   +A  L+D    M KE   PNI TYN +I G C+KG L++A  LLN++
Sbjct: 405 TLIDGHCKVGNFVRAYELMD---LMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461

Query: 499 LEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNIS 534
              GL  +  TY I+                  +M++ GF PDI  +   IS
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 48/363 (13%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
             R  + GL  +  +   L+    K G F     +   M +     N+ ++N +++GLCK
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L++A  ++  +   G+    VTY IL+  +C++       ++   F  M++ G  P+
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN---RSLVFFNKMLKVGFTPD 504

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             ++ TLI  FC+ + +  + ++FEE  S G+     TY S+I G C  G    AV L  
Sbjct: 505 IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M   G  P+ +T  ALI+G CK+  ++ AR L+D + ++GLSP  +T  TL   YCK+ 
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A                                    N+++ L     R  + T N
Sbjct: 625 DSSTAI-----------------------------------NVLDRLEK---RQWIRTVN 646

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            LV  LC +GK   A     ++   E     PN+    +L  GF  K    +  GL++EL
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKLLDKE-----PNVNRVTLL--GFMNKCYESNKYGLVSEL 699

Query: 499 LEK 501
            E+
Sbjct: 700 SER 702



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 22/203 (10%)

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             ++  F +   +++A  +  ++  QGL  S  T N ++D     G +E A  M   M  
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RGV PD  ++  ++      G V      +N +V  G      T  +++ A C+ G   +
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
            V    +M +M      PN++ +  LI G C++G ++ A  LL                 
Sbjct: 278 VVGYFWKMVEMGLA---PNVINFTALINGLCKQGSIKQAFELL----------------- 317

Query: 513 VREEMMEKGFIPDIEGHMYNISG 535
             EEM+ +G+ P++  H   I G
Sbjct: 318 --EEMVRRGWKPNVYTHTTLIDG 338


>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 216/451 (47%), Gaps = 15/451 (3%)

Query: 18  NHHWSKLKNTD----PNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
           N  W+KL +      P  +   +     D VL   +F W   +     +L     +LH L
Sbjct: 142 NSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHIL 201

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL----STCSDSLCRNSIIIDMLMLAYVKN 129
               K+    S L   + +G     S +F A+      C  S C    + D L   Y + 
Sbjct: 202 TKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPC----VFDSLFKTYAQM 257

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K     + F +  DYG    V SCN  + A +   + +     Y+EM+R RI  N+ + 
Sbjct: 258 KKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTL 317

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N V+   CK GKL KA ++ + M+++G SP + +YN LI GYC KG +    K   +   
Sbjct: 318 NMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL--- 374

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M +NG+ P++VTFNTLI+GFC+   +  A K+F EM ++ +    +TYN+LING    G 
Sbjct: 375 MEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGN 434

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +    L DEM+ +G+K +++T NALI G C +   +KA  L  ++  + L P+  T++ 
Sbjct: 435 SEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSA 494

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C     E AF +  SM+  G  P+  T+  LI+   +  + +G   ++ E+    
Sbjct: 495 LITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERS 554

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +     T + L   L   GK + A+ L  EM
Sbjct: 555 IAPDSDTLSELCRGLWLSGKEELALKLCKEM 585



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 160/323 (49%), Gaps = 10/323 (3%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC--KKGGIGKMYKADAV 246
           F+ +     +  KL  A D+   MK  G  P+V + N  I      ++G I     A   
Sbjct: 247 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDI-----ALTF 301

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++M    I PN  T N ++  FCK   +  A++VF+ M + G +  + +YN+LI G C 
Sbjct: 302 YREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCN 361

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+  + L+  M  +G++P+ VT N LINGFC+   + +A  +F ++    + P+ IT
Sbjct: 362 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTIT 421

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI+ Y + G  E    + + ML  G+  D+ TYN LI GL  EG  +    ++ EL 
Sbjct: 422 YNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELD 481

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
              +     T++ L+   C    S++A  L   M +       PN  T+ +LI  FC+  
Sbjct: 482 RENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCH---PNYHTFKMLISTFCKNE 538

Query: 487 KLEDANGLLNELLEKGLIPNQTT 509
             + A  ++ E+ E+ + P+  T
Sbjct: 539 DFDGAVEVVREMSERSIAPDSDT 561



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)

Query: 192 VLNGLCKAGKLNKASDIMEDM----KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           VL G+  +G ++  S + E +    +    SP V  ++ L   Y +   + K+  A  VF
Sbjct: 213 VLKGILGSGSIDHPSKLFEAILYSYRICDSSPCV--FDSLFKTYAQ---MKKLRNAIDVF 267

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M + G LP   + N  I      +    A+  + EM  + I+  V T N ++   C  
Sbjct: 268 CQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKW 327

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GKL++A+ +   M   G  P + + N LI G+C K L+     L   + + G+ P  +T+
Sbjct: 328 GKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTF 387

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NTLI+ +C+ G++ +A  + + M    V+P+  TYN LI G S+ GN E    + +E++ 
Sbjct: 388 NTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLR 447

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           NG++A ++TYN L+  LC +G++KKA  L+ E   +++E   PN  T++ LI G C +  
Sbjct: 448 NGIKADILTYNALILGLCMEGRTKKAAYLVKE---LDRENLVPNSSTFSALITGQCVRKN 504

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
            E A  L   ++  G  PN  T+++                V  EM E+   PD
Sbjct: 505 SERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPD 558



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 3/223 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +  + L+  + +  K H   + F       +  + ++ N L+    + G  E    ++
Sbjct: 383 DDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLH 442

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R  I+ ++ ++N ++ GLC  G+  KA+ +++++    + P   T++ LI G C +
Sbjct: 443 DEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVR 502

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               + ++   ++K M+ +G  PN  TF  LI  FCK+E+   A++V  EM    IA   
Sbjct: 503 KNSERAFQ---LYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDS 559

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
            T + L  GL + GK + A+ L  EM    L P     +  IN
Sbjct: 560 DTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTIN 602


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 227/434 (52%), Gaps = 8/434 (1%)

Query: 50  FCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST 107
           F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+  
Sbjct: 1   FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILE 60

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
              +   +  +   L+ AY++        E ++   ++ L     +C ++L  L+K   F
Sbjct: 61  TKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYF 120

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           + V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN L
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           ++GY + G + + ++  +    M+ +G+LP+  T++ LI+G CK+  +  A ++F+EM  
Sbjct: 181 MNGYIRLGHLDEGFRLKSA---MLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLV 237

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+    VT+ +LI+G C +G++D A+ +   M++  L P+++T N LI G CKK  +++
Sbjct: 238 KGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 297

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+
Sbjct: 298 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALIS 357

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M++  
Sbjct: 358 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRNG 414

Query: 468 KWPNIVTYNVLIKG 481
             P++VTYNVL+ G
Sbjct: 415 HAPSVVTYNVLMNG 428



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 127 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 186

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG+ P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 187 LGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 246

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 247 FTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 306

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 307 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYAALISGL 359

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 360 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 398



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 66  RSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 125

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 182

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 183 GYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP 242

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 243 NGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 302

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 303 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQE 362

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 363 GRSVDAEKMLREMLSVGLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSV 419

Query: 508 TTYQIV 513
            TY ++
Sbjct: 420 VTYNVL 425



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 18  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 58

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +  +     T   ++  L +  
Sbjct: 59  LETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 118

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 119 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 172

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G++P+  TY +                + 
Sbjct: 173 SVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELF 232

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG IP+       I+GH  N
Sbjct: 233 DEMLVKGLIPNGVTFTTLIDGHCKN 257


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 231/442 (52%), Gaps = 17/442 (3%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           L  L  A  +PK R F+ +++      S + +       + +L R + ++  +++ + +N
Sbjct: 118 LSFLYWAIGFPKFRHFMRLYI-----VSATALIG-----NKNLERANEVMQCMVMNFAEN 167

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            K            + GL  S  + N +L   V  G  E  E ++ EM +R +  +  SF
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++   C  G++ +A   +  M   G      T  ++ID +C+KG + ++      F  
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV---GYFWK 284

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MVE G+ PN + F  LI+G CK  +I  A ++ EEM   G    V T+ +LI+GLC  G 
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 310 LDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            ++A  L  +++ S G KPNV T  A+ING+CK+  + +A +L   + EQGL P+  TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID +CK G    A+ + + M   G  P++ TYN +I GL ++G+++    ++N++  +
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++A  VTY IL+   C+   + +++   ++M K+      P+I +Y  LI  FC++ ++
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT---PDIHSYTTLISTFCRQKQM 521

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           +++  L  E +  GLIP + TY
Sbjct: 522 KESERLFEEAVSLGLIPTKKTY 543



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 7/369 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  ++ A  ++G    V   + +M    +  N+ +F  ++NGLCK G + +A +++E+M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCK 271
              G  P V T+  LIDG CKKG   K ++   +F  +V  +G  PN  T+  +I+G+CK
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFR---LFLKLVRSDGYKPNVHTYTAMINGYCK 377

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           ++ ++ A  +   M   G+     TY +LI+G C  G    A  L D M   G  PN+ T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            NA+I+G CKK  +++A  L + +S  GL    +TY  L+  +C++     +    N ML
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  PD+ +Y  LI+   R+  ++    +  E V+ G+     TY  ++   C+ G + 
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            AV L     +M      P+ +TY  LI G C++ KL+DA  L + +++KGL P + T  
Sbjct: 558 LAVKLFQ---RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 512 IVREEMMEK 520
            +  E  +K
Sbjct: 615 TLAYEYCKK 623



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 208/407 (51%), Gaps = 45/407 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + GL  +V++   L+  L K+G  +    + +EM RR  + N+ +   +++GLCK
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 199 AGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G   KA  + ++ ++S G  P V TY  +I+GYCK+    K+ +A+ +   M E G++P
Sbjct: 342 KGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED---KLNRAEMLLSRMQEQGLVP 398

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+ TLIDG CK  N   A ++ + MG  G +  + TYN++I+GLC  G LDEA  L 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 318 -----------------------------------DEMMASGLKPNVVTSNALINGFCKK 342
                                              ++M+  G  P++ +   LI+ FC++
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQ 518

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           K ++++  LF++    GL P+  TY ++I  YC+ G    A  +   M + G  PD  TY
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             LI+GL +E  ++  RN+ + +++ G+    VT   L    CK   S  A+++LD +  
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL-- 636

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             ++++W  I T N L++  C +GKL+ A    ++LL+K    N+ T
Sbjct: 637 --EKRQW--IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 175/352 (49%), Gaps = 23/352 (6%)

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GKL +A +++ +M++ G+ P   T N ++D      G+G +  A+ +F +M + G+ P+ 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLD---VAVGMGLVEIAENMFVEMCQRGVSPDC 224

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           V+F  ++   C    +  A +    M   G      T   +I+  C  G ++  V    +
Sbjct: 225 VSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  GL PNV+   ALING CK+  +++A  L +++  +G  P+V T+ TLID  CK+G 
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 380 MEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            E AF +   ++   G  P+V TY  +I G  +E  +     +++ +   G+     TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   CK G   +A  L+D    M KE   PNI TYN +I G C+KG L++A  LLN++
Sbjct: 405 TLIDGHCKVGNFVRAYELMD---LMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461

Query: 499 LEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNIS 534
              GL  +  TY I+                  +M++ GF PDI  +   IS
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 48/363 (13%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
             R  + GL  +  +   L+    K G F     +   M +     N+ ++N +++GLCK
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L++A  ++  +   G+    VTY IL+  +C++       ++   F  M++ G  P+
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN---RSLVFFNKMLKVGFTPD 504

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             ++ TLI  FC+ + +  + ++FEE  S G+     TY S+I G C  G    AV L  
Sbjct: 505 IHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M   G  P+ +T  ALI+G CK+  ++ AR L+D + ++GLSP  +T  TL   YCK+ 
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
               A                                    N+++ L     R  + T N
Sbjct: 625 DSSTAI-----------------------------------NVLDRLEK---RQWIRTVN 646

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            LV  LC +GK   A     ++   E     PN+    V + GF  K    +  GL++EL
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKLLDKE-----PNV--NRVTLLGFMNKCYESNKYGLVSEL 699

Query: 499 LEK 501
            E+
Sbjct: 700 SER 702



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 22/247 (8%)

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +GKL EAV +  EM   GL P+  T N +++      LVE A  +F ++ ++G+SP  ++
Sbjct: 167 NGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +  ++ A C  GR+ +A    N+M++RG + D +T   +I    ++G V  V     ++V
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQK 485
             G+   ++ +  L+  LCK G  K+A  LL+EM +    + W PN+ T+  LI G C+K
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR----RGWKPNVYTHTTLIDGLCKK 342

Query: 486 GKLEDANGLLNELLEK-GLIPNQTTY----------------QIVREEMMEKGFIPDIEG 528
           G  E A  L  +L+   G  PN  TY                +++   M E+G +P+   
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402

Query: 529 HMYNISG 535
           +   I G
Sbjct: 403 YTTLIDG 409


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 217/416 (52%), Gaps = 36/416 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK     G K +V + N ++  + KEG  E    +++EMK R +  +  ++N +++G  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+L+      E+MKS+   P V+TYN LI+ +CK G   K+ K    +++M ++G+ PN
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSG---KLPKGLEFYREMKQSGLKPN 237

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V+++TL+D FCK++ +  A+K + +M   G      TY SL++  C  G L +A  L +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G++ NVVT  ALI+G C  + +++A  LF  +   G+ P++ +YN LI  + K  
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+ A  + N +  RG+ PD+  Y   I GL     +E  + +MNE+  NG++A  + Y 
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKK------------------------------ 468
            L+ A  K G   + + LL+EM +++ E                                
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND 477

Query: 469 ---WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               PN   Y  +I G C++ +++ A  L  ++ ++GL+P++T Y  + +  +++G
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L   L+  G  E+    + +MKR R+     S N +L+   K GK +      +DM  
Sbjct: 67  DALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG 126

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V TYNI+ID   K+G I     A  +F++M   G++P+ VT+N++IDG+ K   
Sbjct: 127 AGSKPTVFTYNIMIDCMWKEGDI---EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +  FEEM S      V+TYNSLIN  C  GKL + +    EM  SGLKPNVV+ + 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+ ++++A   + D+   G  P+  TY +L+DA CK G + DAF + N ML+ G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  +V TY  LI GL     ++    +  ++V  G+   L +YN L+    K     +A+
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL+E   ++     P+++ Y   I G C   K+E A  ++NE+ E G+  N   Y  + 
Sbjct: 364 ELLNE---LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 421 DAYFKSG 427



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 236/526 (44%), Gaps = 86/526 (16%)

Query: 79  YPKIRS---FLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           +PK RS    LH F K GK   V   F  +  +    ++   +I+ID +     K     
Sbjct: 95  FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMW----KEGDIE 150

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
                F+     GL    ++ N ++    K G+ +D  Y ++EMK    E ++ ++N ++
Sbjct: 151 AARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLI 210

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N  CK+GKL K  +   +MK  G+ P VV+Y+ L+D +CK+     M +A   + DM   
Sbjct: 211 NCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKED---MMQQAIKFYVDMRRV 267

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G +PNE T+ +L+D  CK  N+S A ++  EM   G+   VVTY +LI+GLC   ++ EA
Sbjct: 268 GHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEA 327

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKK------------------------------ 343
             L  +M+ +G+ PN+ + NALI+GF K K                              
Sbjct: 328 EKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWG 387

Query: 344 -----LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML------- 391
                 +E A+V+ +++ E G+  + + Y TL+DAY K G   +   +   M        
Sbjct: 388 LCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVT 447

Query: 392 -----------------------------DRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
                                        D G+ P+ + Y  +I GL +E  V+    + 
Sbjct: 448 VVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLF 507

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            ++   G+      Y  L+    K G   +A++L D+M ++  +    +++ Y  L+ GF
Sbjct: 508 EQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKL---DLLAYTSLVWGF 564

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            Q  +L+ A   L E++ + ++P++     V ++  E G I +  G
Sbjct: 565 SQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVG 610



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 217/458 (47%), Gaps = 46/458 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G+       F  + + S   C   +I  + L+  + K+ K   G E ++  
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMS---CEPDVITYNSLINCFCKSGKLPKGLEFYREM 229

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              GLK +V+S + L+ A  KE   +     Y +M+R     N  ++  +++  CK G L
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNL 289

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A  +  +M  +GV   VVTY  LIDG C      +M +A+ +F  MV  G++PN  ++
Sbjct: 290 SDAFRLANEMLEVGVEWNVVTYTALIDGLCDAE---RMKEAEKLFGKMVTAGVIPNLASY 346

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI GF K +N+  A+++  E+   GI   ++ Y + I GLC   K++ A  + +EM  
Sbjct: 347 NALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQE 406

Query: 323 SGLKPN-----------------------------------VVTSNALINGFCKKKLVEK 347
           +G+K N                                   VVT   LI+G CK KLV K
Sbjct: 407 NGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSK 466

Query: 348 ARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           A   F  +S   GL P+   Y  +ID  CKE +++ A  +   M   G++PD + Y  L+
Sbjct: 467 AIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLM 526

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  ++GN+     + +++   GM+  L+ Y  LV    +  + +KA S L+EM     E
Sbjct: 527 DGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMI---GE 583

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           +  P+ V    ++K   + G +++A GL + L++  L+
Sbjct: 584 EILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLL 621



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 5/232 (2%)

Query: 281 VFEEMGS--HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           VF+E+ S  +    G   +++L + L   G L+EA     +M    + P   + N L++ 
Sbjct: 48  VFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHK 107

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           F K    +  +  F D+   G  P+V TYN +ID   KEG +E A  +   M  RG++PD
Sbjct: 108 FAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPD 167

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             TYN +I G  + G ++       E+ +      ++TYN L+   CK GK  K +    
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYR 227

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E   M++    PN+V+Y+ L+  FC++  ++ A     ++   G +PN+ TY
Sbjct: 228 E---MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTY 276


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 224/421 (53%), Gaps = 6/421 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   + + + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E +    ++ L     +C ++L  L+K   F+ V   Y+++   
Sbjct: 71  GLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 191 FRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+++ G++  + TY +++   CK G   K   LL E   M++    P++VTYNVL+ 
Sbjct: 368 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE---MQRNGHAPSVVTYNVLMN 424

Query: 481 G 481
           G
Sbjct: 425 G 425



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y   +  ++ +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             ED+   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+I TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSV 416

Query: 508 TTYQIV 513
            TY ++
Sbjct: 417 VTYNVL 422



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           ++D++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 124 YEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 304 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 356

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 395



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 332 SNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNS 389
           + +LI     +K    A  +F  I E +G   S +  ++ LI AY + G + DA      
Sbjct: 32  AKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYTL 91

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             +  +     T   ++  L +    + V     +++  G  A L  +NIL+   CKDG 
Sbjct: 92  TREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGD 151

Query: 450 SKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            + A S+ D +       KW   P++V+YN L+ G+ + G L++   L + +L  G+ P+
Sbjct: 152 IRVAQSVFDAI------TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 205

Query: 507 QTTYQI----------------VREEMMEKGFIPD-------IEGHMYN 532
             TY +                + +EM+ KG +P+       I+GH  N
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 208/392 (53%), Gaps = 22/392 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S + ++    KEG  +     Y EM  +RI  N+ ++N ++  LCKA  ++KA +++ 
Sbjct: 88  VVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 147

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   GV P  +TYN ++ G+C     G+  +A    K M  +G+ P+ VT+N+L+D  C
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSS---GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 204

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+   + A K+F+ M   G+   + TY +L+ G    G L E   L D M+ +G+ PN  
Sbjct: 205 KNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 264

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             + L+  + K++ VE+A ++F  + +QGL+P+ +TY  +I   CK GR+EDA      M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D G+ P    YN LI GL      E    ++ E+++ G+    + +N ++ + CK+G+ 
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            ++  L D M ++  +   P+I+TY+ LI G+C  GK+++A  LL  ++  G+ P+  TY
Sbjct: 385 IESEKLFDLMVRIGVK---PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441

Query: 511 Q----------------IVREEMMEKGFIPDI 526
                            ++  EM   G  PDI
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSPDI 473



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 201/362 (55%), Gaps = 9/362 (2%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYN 225
           ED  +V+ E+ RR I  ++ S+N +LNGLC   +  +A +++  M   G    P VV+Y+
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +I+G+ K+G + K Y   + + +M++  I PN VT+N++I   CK + +  AM+V   M
Sbjct: 93  TVINGFFKEGDLDKTY---STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    +TYNS+++G C  G+  EA+    +M + G++P+VVT N+L++  CK    
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +AR +FD ++++GL P + TY TL+  Y  +G + +   + + M+  G+ P+   ++ L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           +   +++  VE    + +++   G+    VTY  ++G LCK G+ + A+   ++M     
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI---D 326

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           E   P  + YN LI G C   K E A  L+ E+L++G+  N   +  + +   ++G + +
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 526 IE 527
            E
Sbjct: 387 SE 388



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 222/437 (50%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G      + ++ +      +  N +  + ++ A  K        
Sbjct: 86  PDVVSYSTVINGFFKEGDLDKTYSTYNEM--LDQRISPNVVTYNSIIAALCKAQTVDKAM 143

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+    ++ N ++      G+ ++     K+M+   +E ++ ++N +++ L
Sbjct: 144 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+  +A  I + M   G+ P++ TY  L+ GY  KG + +M+    +   MV NGI 
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIH 260

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN   F+ L+  + K E +  AM VF +M   G+    VTY ++I  LC  G++++A+  
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+  GL P  +  N+LI+G C     E+A  L  ++ ++G+  + I +N++ID++CK
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGR+ ++  + + M+  GV PD+ TY+ LI G    G ++    ++  +V+ GM+   VT
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y+ L+   CK  + K A+ L  E   ME     P+I+TYN++++G  Q  +   A  L  
Sbjct: 441 YSTLINGYCKISRMKDALVLFRE---MESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 497

Query: 497 ELLEKGLIPNQTTYQIV 513
            + + G     +TY I+
Sbjct: 498 GITKSGRQLELSTYNII 514



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 170/324 (52%), Gaps = 6/324 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++  D GL    +  N L+  L    K+E  E +  EM  R I LN   FN +++  CK
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ ++  + + M  +GV P ++TY+ LIDGYC  G   KM +A  +   MV  G+ P+
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG---KMDEATKLLASMVSVGMKPD 437

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT++TLI+G+CK   +  A+ +F EM S G++  ++TYN ++ GL    +   A  L  
Sbjct: 438 CVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 497

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  SG +  + T N +++G CK KL + A  +F ++    L     T+N +IDA  K G
Sbjct: 498 GITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 557

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R ++A  +  +    G++P+  TY  +   +  +G +E +  +   + +NG        N
Sbjct: 558 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 617

Query: 439 ILVGALCKDGKSKKA---VSLLDE 459
            +V  L + G+  +A   +S++DE
Sbjct: 618 FIVRELLQRGEITRAGTYLSMIDE 641



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 124/220 (56%), Gaps = 6/220 (2%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG--LSPSVITYN 368
           ++A  + DE++  G+ P+V + N L+NG C +   ++A  L   +++ G    P V++Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+I+ + KEG ++  ++  N MLD+ + P+V TYN +IA L +   V+    ++  +V +
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    +TYN +V   C  G+ K+A+  L    KM  +   P++VTYN L+   C+ G+ 
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLK---KMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            +A  + + + ++GL P  TTY  + +    KG + ++ G
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 249



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 144/320 (45%), Gaps = 59/320 (18%)

Query: 99  STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
           +++ H L TC+       +I++ML                     D G+  + +  N ++
Sbjct: 337 NSLIHGLCTCNKWERAEELILEML---------------------DRGICLNTIFFNSII 375

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
            +  KEG+  + E ++  M R  ++ ++ +++ +++G C AGK+++A+ ++  M S+G+ 
Sbjct: 376 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 435

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI------------ 266
           P  VTY+ LI+GYCK   I +M  A  +F++M  +G+ P+ +T+N ++            
Sbjct: 436 PDCVTYSTLINGYCK---ISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492

Query: 267 -----------------------DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
                                   G CK++    A+++F+ +    +     T+N +I+ 
Sbjct: 493 KELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 552

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           L   G+ DEA  L     ++GL PN  T   +      + L+E+   LF  + + G +  
Sbjct: 553 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 612

Query: 364 VITYNTLIDAYCKEGRMEDA 383
               N ++    + G +  A
Sbjct: 613 SGMLNFIVRELLQRGEITRA 632


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 6/405 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S ++   S+ +  LM  + K+ +      A +     GL     +C  ++  L K+ ++ 
Sbjct: 353 SKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYH 412

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
                 K M  R    +      ++ GLCK GK  +A+++   +   G     VT N LI
Sbjct: 413 SAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 472

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G C   G GK+ +A  + K+M+E G+  + +T+N LI GFC +  +    ++ EEM   
Sbjct: 473 HGLC---GAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   + TYN L+ GLC  GKLD+A+ L DE  ASGL  N+ T   ++ G+CK   +E  
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LF+++  + +  + I YN +I A+C+ G +  A  +  +M  +G+LP+ +TY+ LI G
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           +   G VE  +++++E+   G    +V Y  L+G  CK G+   A S   EM        
Sbjct: 650 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH-- 707

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            PN  TY V+I G+C+ G +E AN LL ++ E G++P+  TY ++
Sbjct: 708 -PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 246/518 (47%), Gaps = 65/518 (12%)

Query: 74  VVAKK--YPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++A+K  +P +++    L   VK  +F     +F  +S   +  C +      ++ A  K
Sbjct: 176 LLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS---EGACPDVFSFTNVINALCK 232

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K     E F +    G+  +V++ N ++  L + G+ ++   + ++M  + ++ NL +
Sbjct: 233 GGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKT 292

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  ++NGL K    +K + I+++M   G +P VV +N LIDGYCK G I    K   V  
Sbjct: 293 YGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV-- 350

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA------GVVTY----- 297
            M+   I P  VT  +L+ GFCK + I  A    EE+ S G++        VV +     
Sbjct: 351 -MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 409

Query: 298 ------------------------NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
                                     L+ GLC DGK  EA  L   ++  G   + VTSN
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           ALI+G C    + +A  +  ++ E+GL    ITYN LI  +C EG++E  F +R  M  R
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+ PD+ TYN L+ GL   G ++    + +E   +G+ + + TY I++   CK  + +  
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--- 510
            +L +E+   + E    N + YN++IK  CQ G +  A  LL  +  KG++PN  TY   
Sbjct: 590 ENLFNELLSKKMEL---NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646

Query: 511 -------------QIVREEMMEKGFIPDIEGHMYNISG 535
                        + + +EM ++GF+P++  +   I G
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 47/448 (10%)

Query: 119 IDMLMLAYVKNMKPHLGF----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            D+L+  Y    + +LGF    + F      G   S+ +CN  L +LVK  +FE    V+
Sbjct: 151 FDLLIHVYSTQFR-NLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVF 209

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M       ++ SF  V+N LCK GK+  A ++   M+ LG+SP VVTYN +I+G C+ 
Sbjct: 210 RVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN 268

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +   ++     + M   G+ PN  T+  LI+G  K         + +EM   G    V
Sbjct: 269 GRLDNAFELK---EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNV 325

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V +N+LI+G C  G ++ A+ ++D M++  + P  VT  +L+ GFCK   +E A    ++
Sbjct: 326 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 385

Query: 355 ISEQGLS-----------------------------------PSVITYNTLIDAYCKEGR 379
           I   GLS                                   PS +    L+   CK+G+
Sbjct: 386 ILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK 445

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
             +A  +   +L++G      T N LI GL   G +     I+ E++  G+    +TYN 
Sbjct: 446 HLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNA 505

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+   C +GK +    L +EM K   +   P+I TYN L++G C  GKL+DA  L +E  
Sbjct: 506 LILGFCNEGKVEGCFRLREEMTKRGIQ---PDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 562

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             GLI N  TY I+ E   +   I D+E
Sbjct: 563 ASGLISNIHTYGIMMEGYCKANRIEDVE 590



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +++ ML+    K+ K     E + R  + G  +S ++ N L+  L   GK  +   + KE
Sbjct: 431 LLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKE 490

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R + ++  ++N ++ G C  GK+     + E+M   G+ P + TYN L+ G C    
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN--- 547

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +GK+  A  ++ +   +G++ N  T+  +++G+CK   I     +F E+ S  +    + 
Sbjct: 548 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 607

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN +I   C +G +  A+ L + M + G+ PN  T ++LI+G C   LVE A+ L D++ 
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G  P+V+ Y  LI  YCK G+M+ A +    M+   + P+  TY  +I G  + GN+E
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++ ++  +G+   +VTYN+L    CK      A  + D+   M  E    + +TY 
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ---MATEGLPVDEITYT 784

Query: 477 VLIKGF 482
            L+ G+
Sbjct: 785 TLVHGW 790



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 29/204 (14%)

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR------MEDAFAMRNSMLDRGVLPD 398
           +E A  LF   S  G       ++ LI  Y  + R        D F +   +  +G  P 
Sbjct: 129 IEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYL---LARKGTFPS 185

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           + T N  ++ L +    E    +   +++ G    + ++  ++ ALCK GK + A+ L  
Sbjct: 186 LKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELF- 243

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI------ 512
              KMEK    PN+VTYN +I G CQ G+L++A  L  ++  KG+ PN  TY        
Sbjct: 244 --MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI 301

Query: 513 ----------VREEMMEKGFIPDI 526
                     + +EM+  GF P++
Sbjct: 302 KLNFFDKVNHILDEMIGAGFNPNV 325


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 15/441 (3%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTCSDSLCRNSIIIDMLM 123
           L   +V ++  P I  F  +           T+ +      L   S  L   +I+I    
Sbjct: 58  LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH--- 114

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +         +    G + S+++   LL       +  D   +   M +   E
Sbjct: 115 -CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+  +N +++GLCK G+LN A +++ +M+  G+   VVTYN L+ G C  G   +   A
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG---RWSDA 230

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + +DM++  I P+ VTF  LID F K  N+  A ++++EM    +    VTYNS+ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC+ G+L +A    D M + G  PNVVT N LI+GFCK ++V++   LF  +S +G +  
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           + TYNTLI  YC+ G++  A  +   M+ R V PD+ T+  L+ GL   G +E      +
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           ++  +    G+V YNI++  LCK  K +KA  L     ++  E   P+  TY ++I G C
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF---CRLPVEGVKPDARTYTIMILGLC 467

Query: 484 QKGKLEDANGLLNELLEKGLI 504
           + G   +A+ L+  + E+G+I
Sbjct: 468 KNGPRREADELIRRMKEEGII 488



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 203/396 (51%), Gaps = 35/396 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++   +LL A     ++E V Y  ++M+   I  +L SF  +++  C+  +L+ A  ++
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L+ G+C    IG  +    +   MV++G  PN V +NTLIDG 
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGL 186

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  ++ A+++  EM   G+ A VVTYN+L+ GLC  G+  +A  +  +MM   + P+V
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT  ALI+ F K+  +++A+ L+ ++ +  + P+ +TYN++I+  C  GR+ DA    + 
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +G  P+V TYN LI+G  +   V+    +   +   G  A + TYN L+   C+ GK
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366

Query: 450 SKKAVSLLDEMFK--------------------------------MEKEKKWPNIVTYNV 477
            + A+ +   M                                  M + +K+  IV YN+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +I G C+  K+E A  L   L  +G+ P+  TY I+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 183/374 (48%), Gaps = 25/374 (6%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           S++  G LLH   +  +     S + + VK+G   +V       +T  D LC+N      
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV----YNTLIDGLCKNG----- 190

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
                    + ++  E        GL + V++ N LL  L   G++ D   + ++M +R 
Sbjct: 191 ---------ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  ++ +F  +++   K G L++A ++ ++M    V P  VTYN +I+G C     G++Y
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH---GRLY 298

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A   F  M   G  PN VT+NTLI GFCK   +   MK+F+ M   G  A + TYN+LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GKL  A+ +   M++  + P+++T   L++G C    +E A V FDD+ E    
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             ++ YN +I   CK  ++E A+ +   +   GV PD  TY  +I GL + G     R  
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP----RRE 474

Query: 422 MNELVNNGMRAGLV 435
            +EL+      G++
Sbjct: 475 ADELIRRMKEEGII 488



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 6/348 (1%)

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +FED   ++ EM   +   ++  F  +L       +        + M+  G+S  + ++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           ILI  +C+     ++  A +V   M++ G  P+ VTF +L+ GFC    I  A  +   M
Sbjct: 111 ILIHCFCR---CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VV YN+LI+GLC +G+L+ A+ L +EM   GL  +VVT N L+ G C     
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A  +  D+ ++ ++P V+T+  LID + K+G +++A  +   M+   V P+  TYN +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G +   +   + + + G    +VTYN L+   CK     + + L     +M  
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ---RMSC 344

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           E    +I TYN LI G+CQ GKL  A  +   ++ + + P+  T+ I+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 3/243 (1%)

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GF        A  +F EM        +V +  L+       + +  +    +M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++ +   LI+ FC+   +  A  +   + + G  PS++T+ +L+  +C   R+ DAF++ 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G  P+V  YN LI GL + G +     ++NE+   G+ A +VTYN L+  LC  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L +M K       P++VT+  LI  F ++G L++A  L  E+++  + PN 
Sbjct: 225 GRWSDAARMLRDMMKRSIN---PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 508 TTY 510
            TY
Sbjct: 282 VTY 284



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           + ++A AL  EM+ S   P++V    L+      +  E        +   G+S  + ++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI  +C+  R+  A ++   M+  G  P + T+  L+ G      +    +++  +V +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +V YN L+  LCK+G+   A+ LL+EM   EK+    ++VTYN L+ G C  G+ 
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            DA  +L +++++ + P+  T+  + +  +++G
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   + + + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+ N 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +V   M+ +G+ P+  T++ LI+G CK+  +  A + F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSV---MLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A  +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L DD+S +GL P  ITY TLIB  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++  ++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHAPSVVTYNVLMNG 431



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V+ NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSVVSXNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A    DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A+ ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 366 GRSVDAEKMLREMLSVRLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 161/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+ N+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A   FD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++++ 
Sbjct: 250 FTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKITYTTLIBGCCKEGD-------LDSAFEHRKRMIQENIRLDDVVYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L   L P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKG 401



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 332 SNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNS 389
           + +LI     +K    A  +F  I E +G   S +  ++ LI AY + G + DA      
Sbjct: 38  AKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRL 97

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             +  +     T   ++  L +    + V     E++  G  A L  +NIL+   CKDG 
Sbjct: 98  TREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD 157

Query: 450 SKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            + A S+ D +       KW   P++V+ N L+ G+ + G L++   L + +L  G+ P+
Sbjct: 158 IRVAQSVFDAI------TKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPD 211

Query: 507 QTTYQIV----------------REEMMEKGFIPD-------IEGHMYN 532
             TY ++                 +EM+ KG +P+       I+GH  N
Sbjct: 212 VYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKN 260


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 256/556 (46%), Gaps = 64/556 (11%)

Query: 10  EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
           + I   +  H W  L   +     L+  +     +L L++  W  K+  L  +H   +  
Sbjct: 7   KSIYTFLTIHRWESLNRMNYRLGSLRPIHG----MLALKFLNWVIKKPNLEINHLTHIIS 62

Query: 68  RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
              H LV A+ Y   ++ L HM   +  F +V   F AL         N  + D+L+   
Sbjct: 63  TTTHILVKARMYGYAKTTLSHMLHMDVGFNNV---FGALMETYPFCNSNPAVFDLLIRVC 119

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++        EAF+  G  G   SV +CN +L +LVK+ + +     +KEM   R+  N+
Sbjct: 120 LRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNV 179

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
            +FN +LN LC+ GK   A  ++  M   G  P  VTYN L++ YCKKG           
Sbjct: 180 ATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDA 239

Query: 236 ----GIG-----------------KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               GI                  +  K   + + M +N + PNE+T+NTLI+G  K+  
Sbjct: 240 MASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGK 299

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A KVFEEM    +    VTYN+LI G C +G ++EA+ L D M++ GL+PN VT  A
Sbjct: 300 IGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGA 359

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+NG  K         + + +   G+    I+Y T+ID  CK G +E+A  + + ML   
Sbjct: 360 LLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVS 419

Query: 395 VLPDVSTYNCLIAGL-------------------SREGNVEGVRNIMNELVNNGMRAGLV 435
           V PD+ T++ L+ G                     + GN++   N    +  +G  +   
Sbjct: 420 VSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHF 479

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T ++LV + C+ G+ ++A   +D M +M      P+ VT++ +I  +   G    A  + 
Sbjct: 480 TSSVLVASFCRCGRLEEAEYFVDHMSRMGLA---PSSVTFDCIIDTYGNSGDALKAFSVF 536

Query: 496 NELLEKGLIPNQTTYQ 511
           +++   G +P+Q TY+
Sbjct: 537 DKMNSLGHLPSQFTYE 552



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 225/507 (44%), Gaps = 66/507 (13%)

Query: 73  LVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           ++  +  P + +F   L+   + GKF S   +   +          ++  + L+  Y K 
Sbjct: 170 MIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGH--FPTAVTYNTLLNWYCKK 227

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            +     E        G+ + V + N L+  L ++ +      + + M++  +  N  ++
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N ++NGL K GK+  A+ + E+M    + P  VTYN LI G+C  G I +  +   V   
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDV--- 344

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV +G+ PNEVT+  L++G  K         V E M   G+  G ++Y ++I+GLC +G 
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGL 404

Query: 310 LDEAVALRDEMMA-------------------SGLKPNVV-------------------- 330
           L+EAV L D+M+                    +GL PN V                    
Sbjct: 405 LEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALN 464

Query: 331 ---------------TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
                          TS+ L+  FC+   +E+A    D +S  GL+PS +T++ +ID Y 
Sbjct: 465 AYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYG 524

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G    AF++ + M   G LP   TY  L+ GL   G++   +  M+   +     G  
Sbjct: 525 NSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGST 584

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN ++    + G    AV+LLDEM         P+  TY  LI G C+KGK+  A  L 
Sbjct: 585 FYNTMLTLTSRSGNLSNAVALLDEMV---MNNFVPDSFTYTSLIAGLCRKGKMVPALLLS 641

Query: 496 NELLEKGLI-PNQTTYQIVREEMMEKG 521
              +EKGL+ PN   Y  + + ++++G
Sbjct: 642 GRAIEKGLLSPNPAMYTSLVDGLLKEG 668



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 155  NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
              L+  L+KEG  +   Y++++M    ++ +  +FN +L+   + GK++K +DI+  M+S
Sbjct: 658  TSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRS 717

Query: 215  LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              +   + TYNIL+ GY K+ G+ +  K   ++ +M+ +G  P+ +T+++LI G+CK  +
Sbjct: 718  RSLCFNLATYNILLHGYSKRHGMARCSK---LYNEMIIHGFAPDRLTWHSLILGYCKSGS 774

Query: 275  ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +  A+K   ++   G      T N L++ LC   ++  A  L  ++   G+ PNV T N+
Sbjct: 775  LDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNS 834

Query: 335  LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            L NGF +    ++AR +   + E G +P+   + TLI   C+ G ++ A  +++ M   G
Sbjct: 835  LFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILG 894

Query: 395  VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            V       + +I GL+R    +    I+  ++   +   + T+  L+   CK+G   KA+
Sbjct: 895  VSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKAL 954

Query: 455  SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
             L      ME+     ++  YNVLI G C  G ++ A  L  E+ ++ + PN + Y ++ 
Sbjct: 955  ELRS---VMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLI 1011

Query: 515  EEMMEKG 521
            +  +  G
Sbjct: 1012 DSFLCTG 1018



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 170/337 (50%), Gaps = 6/337 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ ++    +   +  A +    M   G SP V T N+++    K   +   +   + FK
Sbjct: 112 FDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFW---SFFK 168

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M+ N + PN  TFN L++  C+     +A  +  +M   G     VTYN+L+N  C  G
Sbjct: 169 EMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKG 228

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   A  L D M + G+  +V T N LI+  C+K    K  ++   + +  + P+ ITYN
Sbjct: 229 RYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYN 288

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI+   KEG++  A  +   M    +LP+  TYN LI G    GN+E    + + +V++
Sbjct: 289 TLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSH 348

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+R   VTY  L+  + K  +     S+L+ M +M+  +     ++Y  +I G C+ G L
Sbjct: 349 GLRPNEVTYGALLNGISKHAQFGLVSSVLERM-RMDGVRV--GHISYTTMIDGLCKNGLL 405

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           E+A  LL+++L+  + P+  T+ ++    ++ G +P+
Sbjct: 406 EEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPN 442



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 5/330 (1%)

Query: 85   FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
             L  + + GK + V+ I   +   S SLC N    ++L+  Y K        + +     
Sbjct: 695  LLDRYSRKGKMSKVNDILSTMR--SRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMII 752

Query: 145  YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            +G     L+ + L+    K G  +      +++     +++  + N +++ LC+  ++  
Sbjct: 753  HGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKM 812

Query: 205  ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            A D+++ +  LGV+P V TYN L +G+ +     +   A  +   ++ENG  P    F T
Sbjct: 813  AFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDE---ARCILHALLENGYAPTCKQFTT 869

Query: 265  LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            LI G C+  N+  AM++ +EM   G+++  V  +++I GL    K DEA  +   M+   
Sbjct: 870  LIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQ 929

Query: 325  LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            + P V T   L++ +CK+  V KA  L   + +  +   V  YN LI   C +G ++ AF
Sbjct: 930  IIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAF 989

Query: 385  AMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
             +   M  R + P+ S Y  LI      GN
Sbjct: 990  KLYEEMEQRDIWPNTSIYIVLIDSFLCTGN 1019


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 6/380 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
             ++++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A +
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           I+  M S G+ P VV YN L+ G C      +  + + +  +M +     ++VTFN L+D
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAE---RWEETEELLAEMFDKDCPLDDVTFNILVD 412

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
            FC++  +   +++ E+M  HG    V+TY ++ING C +G +DEAV L   M A G KP
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N ++   ++ G C  +    A  L   + +QG   + IT+NTLI+  CK+G +E A  + 
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             ML  G  PD+ +Y+ +I GL + G  +    ++N +VN GM    + Y+ +  AL ++
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 592

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+  K + + D    ++      + V YN +I   C++G+ E A   L  ++  G +PN+
Sbjct: 593 GRINKVIQMFD---NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649

Query: 508 TTYQIVREEMMEKGFIPDIE 527
           +TY I+   +  +GF+ + +
Sbjct: 650 STYTILIRGLASEGFVKEAQ 669



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R G +             G    V +CN +L A+  +G  ++  ++ +++  
Sbjct: 198 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 257

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++ME+M  +   P +VT+N LI   C+ G   +
Sbjct: 258 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 317

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   MVE+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 318 VHE---VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+ GLC   + +E   L  EM       + VT N L++ FC+  LV++   L + + E G
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL          
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++M++++  G     +T+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 551

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK ++A  LLN ++ KG+ PN   Y  +   +  +G I  +     NI  T+
Sbjct: 552 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 177/336 (52%), Gaps = 11/336 (3%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ G C+AG+L  A  +     ++ V P   TY  ++   C +G I     A AV  
Sbjct: 130 YNAMVAGYCRAGQLESARRLA---AAVPVPPNAYTYFPVVRALCARGRIAD---ALAVLD 183

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G  P    ++ +++  C+     +A++V E++ + G A  V   N ++N +C  G
Sbjct: 184 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 243

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +DEA+ L  ++ + G +P+VV+ NA++ G C  K     + L +++      P+++T+N
Sbjct: 244 SVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 303

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI   C+ G  E    +   M++ G  PD+  Y  +I G+ +EG++E    I+N + + 
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGK 487
           G++  +V YN L+  LC   + ++   LL EMF    +K  P + VT+N+L+  FCQ G 
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF----DKDCPLDDVTFNILVDFFCQNGL 419

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++    LL ++LE G +P+  TY  V     ++G I
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 197/397 (49%), Gaps = 12/397 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   +    C+  +   + IID   
Sbjct: 286 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIID--- 342

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N LL+ L    ++E+ E +  EM  +   
Sbjct: 343 -GICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 401

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++  C+ G +++  +++E M   G  P V+TY  +I+G+CK+G I +   A
Sbjct: 402 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE---A 458

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + K M   G  PN +++  ++ G C  E    A  +  +M   G     +T+N+LIN 
Sbjct: 459 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF 518

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G +++A+ L  +M+ +G  P++++ + +I+G  K    ++A  L + +  +G+SP+
Sbjct: 519 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 578

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y+++  A  +EGR+     M +++ D  +  D   YN +I+ L + G  E     + 
Sbjct: 579 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 638

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +V++G      TY IL+  L  +G  K+A  +L E+
Sbjct: 639 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 675



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 25/263 (9%)

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G   G V  +SLI  LC  G+  EA                V  NA++ G+C+   +E A
Sbjct: 90  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGAGV---VAYNAMVAGYCRAGQLESA 146

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R L   +    + P+  TY  ++ A C  GR+ DA A+ + M  RG  P    Y+ ++  
Sbjct: 147 RRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 203

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             R G       ++ +L   G    +   N+++ A+C  G   +A+ LL ++     E  
Sbjct: 204 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE-- 261

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---------------- 512
            P++V+YN ++KG C   +      L+ E++     PN  T+                  
Sbjct: 262 -PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 320

Query: 513 VREEMMEKGFIPDIEGHMYNISG 535
           V  +M+E G  PDI  +   I G
Sbjct: 321 VLAQMVEHGCTPDIRMYATIIDG 343


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 228/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   YKE+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L  ++S +GL P  ITY TLID  CKEG ++ AF  R  M++  +  D   Y  LI
Sbjct: 300 QANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++  +++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 161/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   +++ E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G    A    +   +M +E    + V Y  LI G CQ+G
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGNLBTA---FEHRXRMIEENIRLDDVAYTALISGLCQEG 366

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L  +L  GL P+  TY ++  E  +KG
Sbjct: 367 RXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKG 401



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +     D+   VL  L K         
Sbjct: 69  RSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYKEILECGYPXSLYFFNILMHRFCKDGDIRV---AXSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYN LI   CK+G ++ A  + 
Sbjct: 246 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +G+ PD  TY  LI G  +EGN++        ++   +R   V Y  L+  LC++
Sbjct: 306 XEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L  M  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRXVDAEKMLRXMLSVGLK---PDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 52/446 (11%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           VK  +P   +E F      GL  SV++ N L+ A   +G     + V+ +M  ++I+ N+
Sbjct: 162 VKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNV 221

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++  ++  LC+ G +  A  + + MK  G+ P   TYN+L+ G+C++  +     A  +
Sbjct: 222 VTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS---AVVL 278

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++++G+ PN V F TLIDGFCK +  S A  +F EM   G+A  V  YNSL++G   
Sbjct: 279 YQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFR 338

Query: 307 DGKLDEAVALRDEMMASGLKP-----------------------------------NVVT 331
            G   EA+AL  EM   GL P                                   N   
Sbjct: 339 SGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAA 398

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            NALI+ +C+   +E+A      ++E G+ P+V++Y++LID + K G+M+ A A+   M+
Sbjct: 399 YNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMV 458

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+ P+V TY  LI G ++ G ++    +  E++ NG+    +T ++LV  LC++ + +
Sbjct: 459 AKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQ 518

Query: 452 KAVSLLDEM--------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           +AV  + E               F +E+E   PN V Y  LI G    G+  +A  L + 
Sbjct: 519 EAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSY 578

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFI 523
           + + G+IP+  TY ++       G++
Sbjct: 579 MRKSGMIPDSFTYTLLIRGQCMLGYV 604



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 200/385 (51%), Gaps = 25/385 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL + G  ++  YV++   R R    L + N VL+GL KA +   A ++ ++M   G
Sbjct: 125 LVIALSQMGLLDEALYVFR---RLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVTYN LI+  C+    G + KA  V+  MV   I PN VT+ T+I   C++  I 
Sbjct: 182 LVPSVVTYNTLINA-CRFQ--GTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIG 238

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++F+ M   G+     TYN L++G C    ++ AV L  E++ SGL PN V    LI
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLI 298

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GFCK K   +A+ +F ++   G++P+V  YN+L+D   + G  ++A A+   M   G+ 
Sbjct: 299 DGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLC 358

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  T + ++ GL   G +      +  +  +G+      YN L+   C+ G  ++A++ 
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
              M ++  E   PN+V+Y+ LI G  ++GK++ A  +  E++ KG+ PN  TY      
Sbjct: 419 CTRMTEVGIE---PNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475

Query: 513 ------------VREEMMEKGFIPD 525
                       + +EM+E G  P+
Sbjct: 476 HAKNGGIDAAFRLHKEMIENGISPN 500



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 169/335 (50%), Gaps = 20/335 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + +    L+    K  +F + + ++ EM R  +   +  +N +++G  ++G   +A
Sbjct: 286 GLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEA 345

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M  LG+ P   T +I++ G C  G   +M+ AD   + + E+G+  N   +N L
Sbjct: 346 LALYQEMTRLGLCPDEFTCSIVVRGLCDGG---QMHVADRFLQGVQEDGVNLNAAAYNAL 402

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +C+  N+  A+     M   GI   VV+Y+SLI+G    GK+  A+A+  EM+A G+
Sbjct: 403 IDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGI 462

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA-- 383
           +PNVVT  ALI+G  K   ++ A  L  ++ E G+SP+ IT + L+D  C+E R+++A  
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522

Query: 384 FAMRNSML---------------DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           F M  S L               +  ++P+   Y  LI GL  +G       + + +  +
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKS 582

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           GM     TY +L+   C  G    A+ L  +M K+
Sbjct: 583 GMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 617



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 24/320 (7%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++I   L+  + K  +       F     +G+  +V   N L+    + G  ++   +Y
Sbjct: 290 NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349

Query: 175 KEMKRRRIELNLDSF--NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           +EM R  + L  D F  + V+ GLC  G+++ A   ++ ++  GV+     YN LID YC
Sbjct: 350 QEMTR--LGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYC 407

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +   IG + +A A    M E GI PN V++++LIDG  K   +  AM ++ EM + GI  
Sbjct: 408 R---IGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEP 464

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVL 351
            VVTY +LI+G   +G +D A  L  EM+ +G+ PN +T + L++G C++  V++A R +
Sbjct: 465 NVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFV 524

Query: 352 FD----------------DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
            +                 I E+ L P+ + Y TLI     +G+  +A  + + M   G+
Sbjct: 525 MEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGM 584

Query: 396 LPDVSTYNCLIAGLSREGNV 415
           +PD  TY  LI G    G V
Sbjct: 585 IPDSFTYTLLIRGQCMLGYV 604



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 22/306 (7%)

Query: 75  VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHL 134
           VA   P   S +    ++G       ++  ++     LC +     +++       + H+
Sbjct: 322 VAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG--LCPDEFTCSIVVRGLCDGGQMHV 379

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
                +   + G+  +  + N L+    + G  E+       M    IE N+ S++ +++
Sbjct: 380 ADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLID 439

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G  K GK+  A  I  +M + G+ P VVTY  LI G+ K GGI   ++   + K+M+ENG
Sbjct: 440 GHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR---LHKEMIENG 496

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS------HGIAAGV-----------VTY 297
           I PN +T + L+DG C++  +  A++   E         H + +             V Y
Sbjct: 497 ISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIY 556

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +LI GL +DG+  EA  L   M  SG+ P+  T   LI G C    V  A +L+ D+ +
Sbjct: 557 MTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 616

Query: 358 QGLSPS 363
            G+ P+
Sbjct: 617 IGVKPT 622


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 207/385 (53%), Gaps = 8/385 (2%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +AGD  L   V +C  L+    + G   + + V+  M R  +  N  +F  +++G    G
Sbjct: 30  KAGDTTL--DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHG 87

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +  K   + E M+  G+ P + TYNIL+  +C+    G+  +A  +F++M   GI  N V
Sbjct: 88  RREKGLALFEKMRIGGIEPNLYTYNILVGEWCR---TGEFERARLLFEEMPAKGITRNVV 144

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++NTLI G C+   +  A ++ E M   GI   VVT+N L++G    GK+  A+   ++M
Sbjct: 145 SYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQM 204

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
             +G +P+ VT NALI GFC+ + + +A   F D+ E+GL+P+ +TY  LIDA+ +E  M
Sbjct: 205 RMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDM 264

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + AF M   M   G+  DV TY  L+  L  EGN++  R +   +   G++ G V Y++L
Sbjct: 265 DKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDML 324

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    ++G S KA+ L+ E   M K+   PN  +Y + I+  C  GK  +A  L+++++ 
Sbjct: 325 IYGYGREGSSYKAMKLIME---MRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVR 381

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPD 525
            G+  +++  Q++      +G   D
Sbjct: 382 AGVQTSESVRQVLLNAKARQGSPTD 406



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 181/365 (49%), Gaps = 5/365 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H + ++G       +F  +      L  N +    L+  Y  + +   G   F++  
Sbjct: 43  ALVHGYCRSGDVAEAQRVFDVMPRLG--LTPNEVTFTALIHGYFIHGRREKGLALFEKMR 100

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++ ++ + N L+    + G+FE    +++EM  + I  N+ S+N ++ GLC+  K+ 
Sbjct: 101 IGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMK 160

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ ++E M+  G+ P VVT+N+L+DGY   G  GKM  A      M   G  P+ VT+N
Sbjct: 161 DATQLLELMRREGIRPSVVTFNLLVDGY---GKAGKMSNALHFSNQMRMAGYQPSAVTYN 217

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI GFC+  ++  A + F +M   G+A   VTY  LI+    +  +D+A  +   M  +
Sbjct: 218 ALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKA 277

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+ +V T   L++  C +  ++ AR LF  I E+GL    + Y+ LI  Y +EG    A
Sbjct: 278 GLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKA 337

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M  +G +P+ ++Y   I  L  +G       +++++V  G++       +L+ A
Sbjct: 338 MKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNA 397

Query: 444 LCKDG 448
             + G
Sbjct: 398 KARQG 402


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 207/380 (54%), Gaps = 8/380 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-ELNLDSFNFVLNGLCKAGKLNK 204
           G++  V+  N L+  L K GK ED   + +EMK   I   N  ++N +++G  KAG  ++
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++   M   GV P V+T N L+DG CK G   ++++A   F +M   G+  N  T+  
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHG---RVHRAVEFFNEMKGKGLKGNAATYTA 468

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI  FC   NI+ AM+ FEEM S G +   V Y SLI+GLC+ G++++A  +  ++  +G
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              +    N LI+GFCKKK +E+   L  ++ E G+ P  ITYNTLI    K G    A 
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGA 443
            +   M+  G+ P V TY  +I     + NV+    I  E+ +   +    V YNIL+ A
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC++    +A+SL+++M K+++ +  PN  TYN ++KG   K  L  A  L++ ++E+  
Sbjct: 649 LCRNNDVDRAISLMEDM-KVKRVR--PNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705

Query: 504 IPNQTTYQIVREEMMEKGFI 523
            P+  T +++ E +   G I
Sbjct: 706 RPDYITMEVLTEWLSAVGEI 725



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 203/417 (48%), Gaps = 52/417 (12%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN LL  L +    + +  +  EM++R+I  ++ +F  ++N LCKA ++++A  + + +
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL 342

Query: 213 KS------LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI-LPNEVTFNTL 265
           +       +GV P VV +N LIDG CK   +GK     ++ ++M    I  PN VT+N L
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCK---VGKEEDGLSLLEEMKMGNINRPNTVTYNCL 399

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGF K  N   A ++F +M   G+   V+T N+L++GLC  G++  AV   +EM   GL
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA-- 383
           K N  T  ALI+ FC    + +A   F+++   G SP  + Y +LI   C  GRM DA  
Sbjct: 460 KGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASV 519

Query: 384 ---------------------------------FAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                            + +   M + GV PD  TYN LI+ L 
Sbjct: 520 VVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G+      +M +++  G+R  +VTY  ++ A C      + + +  EM    K    P
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVP--P 637

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           N V YN+LI   C+   ++ A  L+ ++  K + PN TTY  +      ++M+ K F
Sbjct: 638 NTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAF 694



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 203/441 (46%), Gaps = 82/441 (18%)

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           C+ LLR L+K G+  D  +V  EM +        +  F + G    G+L ++     D +
Sbjct: 177 CHGLLRVLLKSGRAGDALHVLDEMPQA-------NSGFSVTGEIVFGELVRSGRSFPDGE 229

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKM--------------------------------- 240
            +G+  K+    +  DG+     +GK+                                 
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLT 289

Query: 241 --------YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM----GSH 288
                    + + +  +M +  I P+ VTF  L++  CK   I  A++VF+ +    GS+
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSN 349

Query: 289 --GIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPNVVTSNALINGFCKKKLV 345
             G+   VV +N+LI+GLC  GK ++ ++L +EM M +  +PN VT N LI+GF K    
Sbjct: 350 WVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNF 409

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++A  LF  ++E+G+ P+VIT NTL+D  CK GR+  A    N M  +G+  + +TY  L
Sbjct: 410 DRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTAL 469

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----F 461
           I+      N+        E++++G     V Y  L+  LC  G+   A  ++ ++    F
Sbjct: 470 ISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF 529

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
            +++         YNVLI GFC+K KLE    LL E+ E G+ P+  TY           
Sbjct: 530 SLDRS-------CYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582

Query: 513 -------VREEMMEKGFIPDI 526
                  V E+M+++G  P +
Sbjct: 583 DFATASKVMEKMIKEGLRPSV 603



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 4/339 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+  + K        E F++  + G++ +V++ N L+  L K G+       +
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EMK + ++ N  ++  +++  C    +N+A    E+M S G SP  V Y  LI G C  
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G+M  A  V   +   G   +   +N LI GFCK + +    ++  EM   G+    
Sbjct: 512 ---GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDT 568

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LI+ L   G    A  + ++M+  GL+P+VVT  A+I+ +C KK V++   +F +
Sbjct: 569 ITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGE 628

Query: 355 I-SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           + S   + P+ + YN LIDA C+   ++ A ++   M  + V P+ +TYN ++ G+  + 
Sbjct: 629 MCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKK 688

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            +     +M+ +V    R   +T  +L   L   G+ +K
Sbjct: 689 MLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 172/343 (50%), Gaps = 7/343 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + + ++ N L+    K G F+    ++++M    ++ N+ + N +++GLCK G++++A +
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
              +MK  G+     TY  LI  +C   G+  + +A   F++M+ +G  P+ V + +LI 
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFC---GVNNINRAMQCFEEMLSSGCSPDAVVYYSLIS 506

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C    ++ A  V  ++   G +     YN LI+G C   KL+    L  EM  +G+KP
Sbjct: 507 GLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKP 566

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + +T N LI+   K      A  + + + ++GL PSV+TY  +I AYC +  +++   + 
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIF 626

Query: 388 NSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             M     V P+   YN LI  L R  +V+   ++M ++    +R    TYN ++  +  
Sbjct: 627 GEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRD 686

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                KA  L+D   +M +E   P+ +T  VL +     G++E
Sbjct: 687 KKMLHKAFELMD---RMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 163/335 (48%), Gaps = 6/335 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K G F     +F  ++   + +  N I ++ L+    K+ + H   E F      GLK
Sbjct: 403 FFKAGNFDRAHELFRQMN--EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLK 460

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +  +   L+ A             ++EM       +   +  +++GLC AG++N AS +
Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVV 520

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +  +K  G S     YN+LI G+CKK  + ++Y+   +  +M E G+ P+ +T+NTLI  
Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYE---LLTEMEETGVKPDTITYNTLISY 577

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKP 327
             K  + + A KV E+M   G+   VVTY ++I+  C    +DE + +  EM + S + P
Sbjct: 578 LGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPP 637

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V  N LI+  C+   V++A  L +D+  + + P+  TYN ++     +  +  AF + 
Sbjct: 638 NTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELM 697

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + M++    PD  T   L   LS  G +E +++ +
Sbjct: 698 DRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFV 732


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  LVK G       + +E       +++ ++  +++ L K  K+ +A  +ME + + G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P + TYN L++G CK   +G++ +A  + + +V+NG  P+ VT+ +LIDG  K +   
Sbjct: 65  CTPTIATYNALLNGLCK---MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A K+F+EM S G+A   V Y +LI GL   GK+ +A ++   M + G  P+VVT + +I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   +  A  +F  +  +GL+P+ + Y+ LI   CK  +M+ A  M   M      
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TYN LI GL + G+V   R   +E++  G +  + TYNIL+   CK G +  A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            D+   M   +  PN+VTY  LI G C++ +L  A+     + E+G  P+   Y  + + 
Sbjct: 302 FDD---MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDG 358

Query: 517 MMEKG 521
           + + G
Sbjct: 359 LCKSG 363



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 190/355 (53%), Gaps = 8/355 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V++   L+  L K+ +  +   ++KEM  R + L+   +  ++ GL +AGK+ 
Sbjct: 97  DNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIP 156

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS + + M S G  P VVT + +IDG CK G IG   +   +FK M   G+ PNEV ++
Sbjct: 157 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR---IFKSMEARGLAPNEVVYS 213

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G CK   +  A+++  +M         +TYN LI+GLC  G +  A A  DEM+ +
Sbjct: 214 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA 273

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP+V T N LI+GFCK    + A  +FDD+S    SP+V+TY TLI   CK  ++  A
Sbjct: 274 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M +RG  PD   Y+ L+ GL + G +EG   + +E+  +G+ A   T   L+  
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFH 392

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           LCK  +  +AVSL + +    +++  P+   YN +I    + GK+ +   +  E+
Sbjct: 393 LCKANRVDEAVSLFNAI----RKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 189/393 (48%), Gaps = 37/393 (9%)

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L K  K ++   + +++        + ++N +LNGLCK G+L +A D++  +   G +P 
Sbjct: 44  LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 103

Query: 221 VVTYNILIDGYCKKG--------------------------------GIGKMYKADAVFK 248
           VVTY  LIDG  KK                                   GK+ +A +V+K
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYK 163

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M   G +P+ VT +T+IDG CK   I AA+++F+ M + G+A   V Y++LI+GLC   
Sbjct: 164 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K+D A+ +  +M  +   P+ +T N LI+G CK   V  AR  FD++ E G  P V TYN
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYN 283

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI  +CK G  + A  + + M      P+V TY  LI+GL +   +         +   
Sbjct: 284 ILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G       Y+ LV  LCK GK +    L DEM    +     N  T   LI   C+  ++
Sbjct: 344 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM----ERSGVANSQTRTRLIFHLCKANRV 399

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           ++A  L N + ++G+ P+   Y  +   +++ G
Sbjct: 400 DEAVSLFNAIRKEGM-PHPYAYNSIISALIKSG 431



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 21/289 (7%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           TF+ LI+G  K   +  A  + +E  ++G    + TY ++++ L  + K+ EAVAL +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            A+G  P + T NAL+NG CK   +E+A  L   I + G +P V+TY +LID   K+ R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            +A+ +   M  RG+  D   Y  LI GL + G +    ++   + + G    +VT + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LCK G+   AV +      ME     PN V Y+ LI G C+  K++ A  +L ++ +
Sbjct: 181 IDGLCKAGRIGAAVRIFKS---MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 501 KGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNI 533
               P+  TY I+                 +EM+E G  PD+  + YNI
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDV--YTYNI 284


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 200/377 (53%), Gaps = 6/377 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A +I+ 
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN 321

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M S G+ P VV YN L+ G C      +  + + +  +M +     ++VTFN L+D FC
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAE---RWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +   +++ E+M  HG    V+TY ++ING C +G +DEAV L   M A G KPN +
Sbjct: 379 QNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +   ++ G C  +    A  L   + +QG   + IT+NTLI+  CK+G +E A  +   M
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L  G  PD+ +Y+ +I GL + G  +    ++N +VN GM    + Y+ +  AL ++G+ 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            K + + D    ++      + V YN +I   C++G+ E A   L  ++  G +PN++TY
Sbjct: 559 NKVIQMFD---NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 511 QIVREEMMEKGFIPDIE 527
            I+   +  +GF+ + +
Sbjct: 616 TILIRGLASEGFVKEAQ 632



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 212/418 (50%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R G +             G    V +CN +L A+  +G  +   ++ +++  
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPS 220

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++ME+M  +   P +VT+N LI   C+ G   +
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   M E+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 281 VHE---VLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNT 337

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+ GLC   + +E   L  EM       + VT N L++ FC+  LV++   L + +   G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL          
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++M++++  G     +T+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 514

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK ++A  LLN ++ KG+ PN   Y  +   +  +G I  +     NI  T+
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 198/397 (49%), Gaps = 12/397 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   ++   C+  +   + IID   
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIID--- 305

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N LL+ L    ++E+ E +  EM  +   
Sbjct: 306 -GICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 364

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++  C+ G +++  +++E M   G  P V+TY  +I+G+CK+G I +   A
Sbjct: 365 LDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDE---A 421

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + K M   G  PN +++  ++ G C  E    A  +  +M   G     +T+N+LIN 
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF 481

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G +++A+ L  +M+ +G  P++++ + +I+G  K    ++A  L + +  +G+SP+
Sbjct: 482 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y+++  A  +EGR+     M +++ D  +  D   YN +I+ L + G  E     + 
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +V++G      TY IL+  L  +G  K+A  +L E+
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 175/336 (52%), Gaps = 11/336 (3%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ G C+AG+L  A  +     ++ V P   TY  ++   C +G I     A AV  
Sbjct: 93  YNAMVAGYCRAGQLESARRLA---AAVPVPPNAYTYFPVVRALCARGRIAD---ALAVLD 146

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G  P    ++ +++  C+     +A++V E++ + G A  V   N ++N +C  G
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +D+A+ L  ++ + G +P+VV+ NA++ G C  K     + L +++      P+++T+N
Sbjct: 207 SVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI   C+ G  E    +   M + G  PD+  Y  +I G+ +EG+++    I+N + + 
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSY 326

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGK 487
           G++  +V YN L+  LC   + ++   LL EMF    +K  P + VT+N+L+  FCQ G 
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF----DKDCPLDDVTFNILVDFFCQNGL 382

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++    LL ++L  G +P+  TY  V     ++G I
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 25/257 (9%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V  +SLI  LC  G+  EA                V  NA++ G+C+   +E AR L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGAGV---VAYNAMVAGYCRAGQLESARRLAAA 115

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +    + P+  TY  ++ A C  GR+ DA A+ + M  RG  P    Y+ ++    R G 
Sbjct: 116 VP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGG 172

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                 ++ +L   G    +   N+++ A+C  G   KA+ LL ++     E   P++V+
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCE---PDVVS 229

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMM 518
           YN ++KG C   +      L+ E++     PN  T+                  V  +M 
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA 289

Query: 519 EKGFIPDIEGHMYNISG 535
           E G  PDI  +   I G
Sbjct: 290 EHGCTPDIRMYATIIDG 306


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  V +   L+     +G   ++      M    +  +   FN   +   K G ++KA
Sbjct: 334 GIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 393

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            DI   M+  G+SP VV Y  LID  CK   +G++  A+  F  M+  G+ PN V FN+L
Sbjct: 394 MDIFNKMRQHGLSPNVVNYGALIDALCK---LGRVDDAEVKFNQMINEGVTPNIVVFNSL 450

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G C  +    A ++  EM   GI    V +N+LI  LC  G++ E   L D M   G+
Sbjct: 451 VYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGV 510

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+  +   LI+G+C     ++A  +FD +   GLSP+ +TYNTL+  YC   R++DA+ 
Sbjct: 511 RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC 570

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML +GV P V TYN ++ GL +       + +   ++N+G +  + TYNI++  LC
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC 630

Query: 446 KDGKSKKAVSLLDEMFKMEK----EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           K        + +DE FKM +    +    NI+T+ ++I    + G+ EDA  L   +   
Sbjct: 631 KS-------NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683

Query: 502 GLIPNQTTYQIVREEMMEKGFIPDIE 527
           GL+PN  TY++V E ++E+G + + +
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFD 709



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 225/457 (49%), Gaps = 17/457 (3%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMF--VKNGKFTS-----VSTIFHALSTCSDSLCRNSIIID 120
           +L   L+   +   +R+F H+   V   + +S     VS     +  CSD +  N     
Sbjct: 35  KLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYS 94

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKR 179
           +L+  + +      GF AF      G +   ++ NQLL+ L    +  E ++ + + M  
Sbjct: 95  ILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPE 154

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTYNILIDGYCKKGG 236
                +  S+  +L GLC   +  +A ++   M D       P VV+Y+I+I+G+  +G 
Sbjct: 155 LGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQ 214

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + K Y    +F +M++ GI P+ VT+ T+IDG CK +    A  VF++M  +G      T
Sbjct: 215 VDKPYN---LFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN LI+G    GK  E V + +EM A GLKP+  T  +L+N  CK     +AR  FD + 
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +G+ P V TY  LI  Y  +G + +  +  + M++ G+ PD   +N   +  ++ G ++
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              +I N++  +G+   +V Y  L+ ALCK G+   A    ++M     E   PNIV +N
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI---NEGVTPNIVVFN 448

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            L+ G C   K E A  L+ E+L++G+ PN   +  +
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 210/443 (47%), Gaps = 62/443 (13%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR---RRIELNLDSFNFVLNG 195
            +R  + G     +S   LL+ L  E + E+   +   M     RR   N+ S++ V+NG
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY-KADAVFKDMVENG 254
               G+++K  ++  +M   G+ P VVTY  +IDG CK     +++ +A+ VF+ M++NG
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCK----AQLFDRAEGVFQQMIDNG 264

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  T+N LI G+         +++ EEM + G+     TY SL+N LC +G+  EA 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKK------------------------------- 343
              D M+  G+KP V T   LI+G+  K                                
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 344 ----LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
               +++KA  +F+ + + GLSP+V+ Y  LIDA CK GR++DA    N M++ GV P++
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             +N L+ GL      E    ++ E+++ G+    V +N L+  LC  G+  +   L+D 
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID- 503

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE---- 515
              ME     P+  +Y  LI G+C  G+ ++A  + + ++  GL P + TY  +      
Sbjct: 504 --LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 516 ------------EMMEKGFIPDI 526
                       EM+ KG  P +
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGV 584



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 213/447 (47%), Gaps = 24/447 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           G L+H         ++ SFL + V+NG                  L  +  I ++   AY
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENG------------------LSPDHHIFNIFFSAY 384

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K        + F +   +GL  +V++   L+ AL K G+ +D E  + +M    +  N+
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
             FN ++ GLC   K  +A +++ +M   G+ P  V +N LI   C    +G++ +   +
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN---VGRVMEGRRL 501

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              M   G+ P+  ++  LI G+C       A KVF+ M S G++   VTYN+L++G C 
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             ++D+A  L  EM+  G+ P VVT N +++G  + K   +A+ L+ ++   G    + T
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 621

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN +++  CK   +++AF M  S+  +G+  ++ T+  +I  L + G  E   ++   + 
Sbjct: 622 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG+   +VTY ++   L ++G  ++  SL      MEK    PN    N L++    +G
Sbjct: 682 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS---AMEKNGTAPNSQMLNALVRRLLHRG 738

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
            +  A   L++L E+      +T  ++
Sbjct: 739 DISRAGAYLSKLDERNFSVEASTTSLL 765



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 25/299 (8%)

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN  T++ LI  FC+  ++      F  +   G     +  N L+ GLC   ++ EA+
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 315 -ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE---QGLSPSVITYNTL 370
             L   M   G  P+ V+   L+ G C +K  E+A  L   +++   +   P+V++Y+ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ +  EG+++  + +   M+DRG+ PDV TY  +I GL +    +    +  ++++NG 
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +    TYN L+      GK K+ V +L+EM         P+  TY  L+   C+ G+  +
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEM---SARGLKPDCYTYGSLLNYLCKNGRCRE 322

Query: 491 ANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNI 533
           A    + ++ KG+ P  +TY I+                 + M+E G  PD   H++NI
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD--HHIFNI 379



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE------QGLSPS 363
           LD+A+ L DE++      +V   N L+    + +    + +     +         ++P+
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNIM 422
           + TY+ LI  +C+ G +E  FA    +L  G   D    N L+ GL     V E +  ++
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +   G     V+Y IL+  LC + ++++A+ LL  M      +  PN+V+Y+++I GF
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             +G+++    L  E++++G+ P+  TY  V + + +       EG
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEG 255


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 220/413 (53%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 6   MIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLITAYLE 65

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 66  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 183

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 184 -MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S + L P  ITY 
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYT 302

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       ++ E++N 
Sbjct: 303 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNV 362

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G   K   LL E   M+++   P++VTYNVL+ G
Sbjct: 363 GLKPDSRTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVTYNVLMNG 412



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 171 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 290

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
              ++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 291 MKELKPDKITYTTLIDGCCKEGD-------LDSAFEHRKRMIQENIRLDEVAYTALISGL 343

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 344 CQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKG 382



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 50  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 166

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 167 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 226

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 286

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  + + PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 287 DEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQE 346

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 347 GRSVDAEKMLREMLNVGLK---PDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 403

Query: 508 TTYQIV 513
            TY ++
Sbjct: 404 VTYNVL 409



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 2   SYCTMIHFLCTQQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 42

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 43  VETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 102

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 103 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 156

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 157 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 216

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG +P+       I+GH  N
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKN 241


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 246/521 (47%), Gaps = 67/521 (12%)

Query: 59  ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVK----NGKFTS------VSTIFHALSTC 108
           ASH  L   +L   L+   +   + +F H+       +G+ ++      +S     +  C
Sbjct: 131 ASHDAL---KLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVREC 187

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           SD +  +     +L+  + +  +   GF  F      G + + +  NQLL+ L    + +
Sbjct: 188 SDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLD 247

Query: 169 DVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD---IMEDMKSLGVSPKVVTY 224
           +   +    M       N+ S+N ++ G C   +  +A +   +M D + L   P VV+Y
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N +I+G+ ++G + K Y    +F  M++ GI P+ VT+NT+IDG CK + +  A  VF++
Sbjct: 308 NTVINGFFREGQVDKAYN---LFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQ 364

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-- 342
           M   G+     TYN LI+G    GK  E V L +EM    L+P+      L++  CK   
Sbjct: 365 MLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGR 424

Query: 343 -------------------KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
                               ++++A  +FD + +QGLSP+V+ Y  LIDA CK GR++DA
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA 484

Query: 384 FAMRNS-----------------------MLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
               N                        MLD+G+  DV  +N L+  L REG V   + 
Sbjct: 485 ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQR 544

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++  ++  G+R  +++YN LV   C  G++ +A  LLD M  +  +   PN  TYN L+ 
Sbjct: 545 LIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK---PNEFTYNTLLH 601

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G+C+  +++DA  LL E+L  G  P+  TY  +   + + G
Sbjct: 602 GYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 219/467 (46%), Gaps = 89/467 (19%)

Query: 142 AGDYGLK--SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           A D GL     V+S N ++    +EG+ +    ++ +M  R I  ++ ++N V++GLCKA
Sbjct: 293 ADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKA 352

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGY---------------------------- 231
             +++A  + + M   GV P   TYN LI GY                            
Sbjct: 353 QVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIY 412

Query: 232 -------CKKGG-----------IGKMYKADA-------VFKDMVENGILPNEVTFNTLI 266
                  CK G            I K  K DA       +F  M + G+ PN V +  LI
Sbjct: 413 ALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALI 472

Query: 267 DGFCKDENISAAMKVFE-----------------------EMGSHGIAAGVVTYNSLING 303
           D  CK   +  A+  F                        EM   GI   VV +N+L+  
Sbjct: 473 DALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCD 532

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC +G++ EA  L + M+  G++P+V++ N L++G C     ++A  L D +   GL P+
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TYNTL+  YCK  R++DA+++   ML  G  PDV TYN ++ GL + G     + +  
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK----EKKWPNIVTYNVLI 479
            ++N+  +  + TYNI++  LCK+       + +DE FKM +    +    +I+T+N++I
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKN-------NCVDEAFKMFQSLCSKGLQLHIITFNIMI 705

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
               + GK EDA  L   +   GL+P+  TY ++ E ++++G + ++
Sbjct: 706 GALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 752



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 212/426 (49%), Gaps = 44/426 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++  D G+K S  + N L+   +  GK+++V  + +EM    +E +   +  +L+ LCK
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCK 421

Query: 199 AGKLNKASDIMED---------------------MKSLGVSPKVVTYNILIDGYCKKGGI 237
            G+  +A +I +                      M+  G+SP VV Y  LID  CK G +
Sbjct: 422 NGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRV 481

Query: 238 G--------------------KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
                                K  KA+ +  +M++ GI  + V FNTL+   C++  +  
Sbjct: 482 DDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVME 541

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A ++ E M   G+   V++YN+L++G C+ G+ DEA  L D M++ GLKPN  T N L++
Sbjct: 542 AQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLH 601

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G+CK + ++ A  L  ++   G +P V+TYNT++    + GR  +A  +  +M++     
Sbjct: 602 GYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW 661

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D+ TYN ++ GL +   V+    +   L + G++  ++T+NI++GAL K GK + A+ L 
Sbjct: 662 DMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLF 721

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
                +      P++ TY ++ +   ++G LE+   L + + E G  PN      +    
Sbjct: 722 A---TISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRF 778

Query: 518 MEKGFI 523
           + +G I
Sbjct: 779 LHRGDI 784



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 196/402 (48%), Gaps = 47/402 (11%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L    KNG+ T    IF       DS+ R  I  D ++   V           F +   
Sbjct: 415 LLDYLCKNGRCTEARNIF-------DSVIRKGIKPDAMIDEAVC---------IFDKMRQ 458

Query: 145 YGLKSSVLSCNQLLRALVKEG-----------------------KFEDVEYVYKEMKRRR 181
            GL  +V++   L+ AL K G                       K+E  E +  EM  + 
Sbjct: 459 QGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQG 518

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I L++  FN ++  LC+ G++ +A  ++E M  +GV P V++YN L+DG+C  G   +  
Sbjct: 519 IRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTG---RTD 575

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  +   MV  G+ PNE T+NTL+ G+CK   I  A  +  EM  +G    VVTYN+++
Sbjct: 576 EAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTIL 635

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GL   G+  EA  L   M+ S  + ++ T N ++NG CK   V++A  +F  +  +GL 
Sbjct: 636 HGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQ 695

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA-GLSREGNVEGVRN 420
             +IT+N +I A  K G+ EDA  +  ++   G++PDV TY CLIA  L +EG++E +  
Sbjct: 696 LHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETY-CLIAENLIKEGSLEELGV 754

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
           + + +  NG        N LV      G   +A   +S LDE
Sbjct: 755 LFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDE 796



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 173/336 (51%), Gaps = 29/336 (8%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+P   TY+ILI  +C+   +G++    AVF  +++ G   N + FN L+ G C  + + 
Sbjct: 191 VAPDRCTYSILIGCFCR---MGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLD 247

Query: 277 AAMKVF-EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLK--PNVVTS 332
            A  +    M   G    VV+YN+L+ G C + + +EA+ L   M    GL   P+VV+ 
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N +INGF ++  V+KA  LF  + ++G+ P V+TYNT+ID  CK   ++ A A+   MLD
Sbjct: 308 NTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLD 367

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +GV P   TYNCLI G    G  + V  ++ E+  + +      Y +L+  LCK+G+  +
Sbjct: 368 KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTE 427

Query: 453 AVSLLDEMF------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDA--- 491
           A ++ D +                   KM ++   PN+V Y  LI   C+ G+++DA   
Sbjct: 428 ARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILK 487

Query: 492 -NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            N ++NE+     +      + +  EM+++G   D+
Sbjct: 488 FNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDV 523



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G++  V+  N L+  L +EG+  + + + + M R  +  ++ S+N +++G C  G+ +
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTD 575

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A+ +++ M S+G+ P   TYN L+ GYCK   I   Y   ++ ++M+ NG  P+ VT+N
Sbjct: 576 EAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAY---SLLREMLMNGPTPDVVTYN 632

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T++ G  +    S A +++  M +      + TYN ++NGLC +  +DEA  +   + + 
Sbjct: 633 TILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSK 692

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+ +++T N +I    K    E A  LF  IS  GL P V TY  + +   KEG +E+ 
Sbjct: 693 GLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 752

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + ++M + G  P+    N L+      G++      +++L          T ++L+ +
Sbjct: 753 GVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI-S 811

Query: 444 LCKDGKSKKAVSLLDEMFK 462
           L   G+ ++    L E ++
Sbjct: 812 LYSRGEYQQLAKSLPEKYR 830


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 222/431 (51%), Gaps = 47/431 (10%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LCR S + D +                 +  G      SV+S N L+    K G  + 
Sbjct: 243 DGLCRQSRLQDAVTF--------------LRETGGEEFGPSVVSFNALMSGFCKMGSVDV 288

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            +  +  M +  +  ++ S+N +L+GLC AG + +A +   DM++ GV P +VTYNIL +
Sbjct: 289 AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN 348

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+   G I   +K   V + M+ NG+ P+ VT+  LI G C+  NI  + K+ E+M S G
Sbjct: 349 GFRILGLISGAWK---VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT------------------ 331
           +   +VTY  L++ LC  G++DEAV L  EM   GLKP+++T                  
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCS 465

Query: 332 ---------SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
                     +A+I+G  +K  + +A++ FD +++  ++  +I YN +ID Y K G + +
Sbjct: 466 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 525

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      ++++G+ P + T+N LI G  ++G +     +++ +  +G+    VTY  L+ 
Sbjct: 526 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C++G      S+ D + +ME +   P  +TY V++KG C++G+L ++  LL  +  +G
Sbjct: 586 GYCEEGDMH---SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 642

Query: 503 LIPNQTTYQIV 513
           L P+Q TY  V
Sbjct: 643 LFPDQITYNTV 653



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 191/362 (52%), Gaps = 14/362 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK  +L+ ++        G  E+   +Y+EM  +RI  N    + +++GL + G +++A
Sbjct: 440 GLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 491

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + +    V+ +++ YNI+IDGY K G IG+  ++   +K ++E GI P  VTFN+L
Sbjct: 492 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS---YKQIIEKGISPTIVTFNSL 548

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFCK   ++ A+K+ + +  HG+    VTY +L+NG C +G +     +  EM A  +
Sbjct: 549 IYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 608

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP  +T   ++ G CK+  + ++  L   +  +GL P  ITYNT+I ++CK   ++ AF 
Sbjct: 609 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N ML   + P   TYN LI GL   GN++    ++  L +  +R   V Y  ++ A C
Sbjct: 669 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 728

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G  + A+    +M +   E    +I  Y+ +I   C++  + DA      +L  G+ P
Sbjct: 729 AKGDVQNALVFFHQMVERGFE---VSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 785

Query: 506 NQ 507
           +Q
Sbjct: 786 DQ 787



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 256/543 (47%), Gaps = 48/543 (8%)

Query: 13  TELIRNHHW----SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGR 68
           ++ +  HH+    S L     + ++L L   ++D  L L  F     E    HS +    
Sbjct: 63  SKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDSALFL--FDLLRNEYGFRHSRV--SW 118

Query: 69  LLHSLVVAKK--YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
            + S VVA+K    ++R  L+  V+     S  ++   L         N+++ DML  AY
Sbjct: 119 FIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAY 178

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-VYKEMKRRRIELN 185
            +    H       +     L+ S+ + N LL  L    +  D+ + VY E+K   +  N
Sbjct: 179 SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL----RHTDIMWDVYNEIKASGVPQN 234

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             +   +++GLC+  +L  A   + +       P VV++N L+ G+CK G +     A +
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDV---AKS 291

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
            F  M++ G+LP+  ++N L+ G C   ++  A++   +M +HG+   +VTYN L NG  
Sbjct: 292 FFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFR 351

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           + G +  A  +   M+ +GL P++VT   LI G C+   +E++  L + +  QGL  S++
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN---------------------- 403
           TY  L+ + CK GR+++A  + + M   G+ PD+ TY+                      
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPN 471

Query: 404 -----CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
                 +I+GL  +G +   +   + +  + +   ++ YNI++    K G   +AV    
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           ++  +EK    P IVT+N LI GFC+KGKL +A  LL+ +   GL+P   TY  +     
Sbjct: 532 QI--IEKGIS-PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 588

Query: 519 EKG 521
           E+G
Sbjct: 589 EEG 591



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 198/376 (52%), Gaps = 14/376 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   +++   L+    + G  E+   + ++M  + ++L++ ++  +L+ LCK+G++++A
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M+ +G+ P ++TY+            G + +A  ++++M    I PN    + +
Sbjct: 430 VILLHEMEVIGLKPDLLTYSR-----------GAVEEAIELYEEMCSKRIYPNSFVCSAI 478

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  +   IS A   F+ +    +A  ++ YN +I+G    G + EAV    +++  G+
Sbjct: 479 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 538

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P +VT N+LI GFCKK  + +A  L D I   GL P+ +TY TL++ YC+EG M   F 
Sbjct: 539 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 598

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M + M  + + P   TY  ++ GL +EG +     ++  +   G+    +TYN ++ + C
Sbjct: 599 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 658

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K    +KA  L ++M +   +   P+ VTYNVLI G C  G L+DA+ LL  L ++ +  
Sbjct: 659 KAHDLQKAFQLHNQMLQHSLQ---PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715

Query: 506 NQTTYQIVREEMMEKG 521
            +  Y  + +    KG
Sbjct: 716 TKVAYTTIIKAHCAKG 731



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR--------IELNLDSF------ 189
           +YG + S +S   +   + ++G+ +++  V  +M             EL  +SF      
Sbjct: 108 EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLN 167

Query: 190 NFVLNGLC----KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           N V + L     +A  ++ A  ++  MK L +   + TYN L+        +  +Y    
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN--- 224

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
              ++  +G+  NE T   LIDG C+   +  A+    E G       VV++N+L++G C
Sbjct: 225 ---EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +D A +    M+  GL P+V + N L++G C    +E+A    +D+   G+ P ++
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN L + +   G +  A+ +   ML  G+ PD+ TY  LI G  + GN+E    +  ++
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           ++ G++  +VTY +L+ +LCK G+  +AV LL E   ME     P+++TY+        +
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE---MEVIGLKPDLLTYS--------R 450

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           G +E+A  L  E+  K + PN      +   + EKG I   E  MY
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS--EAQMY 494



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 148/294 (50%), Gaps = 3/294 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            ++K+  + G+  ++++ N L+    K+GK  +   +   +K   +     ++  ++NG 
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ G ++   D++ +M++  + P  +TY +++ G CK+G   +++++  + K M   G+ 
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG---RLHESVQLLKYMYARGLF 644

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+++T+NT+I  FCK  ++  A ++  +M  H +    VTYN LINGLCV G L +A  L
Sbjct: 645 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 704

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              +    ++   V    +I   C K  V+ A V F  + E+G   S+  Y+ +I+  CK
Sbjct: 705 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 764

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
              + DA      ML  G+ PD      ++    R G+   V  I   ++  G+
Sbjct: 765 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 818



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 154/308 (50%), Gaps = 3/308 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    K G   +    YK++  + I   + +FN ++ G CK GKL +A  +++ +K 
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P  VTY  L++GYC++G +  M+    +  +M    I P ++T+  ++ G CK+  
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFD---MLHEMEAKAIKPTQITYTVVVKGLCKEGR 627

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  ++++ + M + G+    +TYN++I   C    L +A  L ++M+   L+P+ VT N 
Sbjct: 628 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 687

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LING C    ++ A  L   + +Q +  + + Y T+I A+C +G +++A    + M++RG
Sbjct: 688 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 747

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               +  Y+ +I  L +   +   +     ++ +G+        +++ A  + G      
Sbjct: 748 FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 807

Query: 455 SLLDEMFK 462
            +   M K
Sbjct: 808 EIFAMMIK 815



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 127/253 (50%), Gaps = 3/253 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL  + ++   L+    +EG    +  +  EM+ + I+    ++  V+ GLCK G+L++
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +  +++ M + G+ P  +TYN +I  +CK   + K ++   +   M+++ + P+ VT+N 
Sbjct: 631 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ---LHNQMLQHSLQPSPVTYNV 687

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+G C   N+  A ++   +    I    V Y ++I   C  G +  A+    +M+  G
Sbjct: 688 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 747

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            + ++   +A+IN  CK+ L+  A+  F  +   G+ P       +++A+ + G     F
Sbjct: 748 FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 807

Query: 385 AMRNSMLDRGVLP 397
            +   M+  G+LP
Sbjct: 808 EIFAMMIKCGLLP 820


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 223/454 (49%), Gaps = 11/454 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+  +L  +       + ++ + + G+      +   +    D+   N +I  + +   V
Sbjct: 119 RVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRV 178

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
            +         F      G   SV++ + LL A  K   +     +  EM+ +  E ++ 
Sbjct: 179 PD-----ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIV 233

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++N +C  G +++A +I+ D+ S G  P  VTY  ++   C   G  +  + + +F
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC---GSERWKEVEELF 290

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M  N   P+EVTFNT++   C+   +  A+KV + M  HG    +VTY+S+++GLC  
Sbjct: 291 AEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++D+AV L   + + G KP+ +    ++ G C  +  E A  L  ++      P  +T+
Sbjct: 351 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTF 410

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT+I + C++G ++ A  +   M + G  PD+ TYN +I GL  E  ++    +++ L +
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G +  +VT+N L+  LC   + + A  L   M  M      P+  T+N +I   CQKG 
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQL---MVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           L  A   L  + E G IPNQ+TY IV + +++ G
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG 561



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 202/383 (52%), Gaps = 13/383 (3%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G K   ++   +L++L    ++++VE ++ EM   +   +  +FN ++  LC+ G +++
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  +++ M   G  P +VTY+ ++DG C    +G++  A  +   +   G  P+ + + T
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCD---VGRVDDAVELLSRLKSYGCKPDTIAYTT 377

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++ G C  E    A ++  EM         VT+N++I  LC  G +D A+ + ++M  +G
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P++VT N++I+G C ++ ++ A  L  ++   G  P ++T+NTL+   C   R EDA 
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  +M+     PD +T+N +I  L ++G +      +  +  NG      TYNI+V AL
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K GK+++A+ LL  M         P+++TYN +I    + GK+E+A  LL  ++  GL 
Sbjct: 558 LKAGKTQEALKLLSGM-----TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612

Query: 505 PNQTTYQ-----IVREEMMEKGF 522
           P+  TY+     I RE+  ++  
Sbjct: 613 PDTITYRSLAYGICREDGTDRAI 635



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+RAL   G+  D   V+ +M  R    ++ +++ +L+  CKA    +A  ++++M++
Sbjct: 166 NPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRA 225

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P +VTYN+LI+  C +G + +      +  D+  +G  P+ VT+  ++   C  E 
Sbjct: 226 KGCEPDIVTYNVLINAMCNEGDVDEALN---ILSDLPSHGCKPDAVTYTPVLKSLCGSER 282

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
                ++F EM S+  A   VT+N+++  LC  G +D A+ + D M   G  P++VT ++
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++G C    V+ A  L   +   G  P  I Y T++   C   + E A  +   M+   
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD  T+N +IA L ++G V+    ++ ++  NG    +VTYN ++  LC +     A+
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL     ++     P+IVT+N L+KG C   + EDA  L+  ++     P+ TT+  V 
Sbjct: 463 ELLS---NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519

Query: 515 EEMMEKGFI 523
             + +KG +
Sbjct: 520 TSLCQKGLL 528



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 47/422 (11%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V+ CN L++ L   G+  D E V+  +        + ++N ++NG C+AG++  A 
Sbjct: 94  LPLPVVPCNILIKRLCSGGRVADAERVFATLG---ASATVVTYNTMVNGYCRAGRIEDAR 150

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++  M      P   T+N LI   C +G   ++  A AVF DM+  G  P+ VT++ L+
Sbjct: 151 RLISGMP---FPPDTFTFNPLIRALCVRG---RVPDALAVFDDMLHRGCSPSVVTYSILL 204

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D  CK      AM + +EM + G    +VTYN LIN +C +G +DEA+ +  ++ + G K
Sbjct: 205 DATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCK 264

Query: 327 PNVVTS-----------------------------------NALINGFCKKKLVEKARVL 351
           P+ VT                                    N ++   C++ LV++A  +
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D +SE G  P ++TY++++D  C  GR++DA  + + +   G  PD   Y  ++ GL  
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
               E    +M E+V +      VT+N ++ +LC+ G   +A+ ++++   M +    P+
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ---MSENGCNPD 441

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           IVTYN +I G C +  ++DA  LL+ L   G  P+  T+  + + +       D E  M 
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV 501

Query: 532 NI 533
           N+
Sbjct: 502 NM 503



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 205/390 (52%), Gaps = 8/390 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++G    +++ + +L  L   G+ +D   +   +K    + +  ++  VL GLC   +  
Sbjct: 330 EHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWE 389

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++M +M      P  VT+N +I   C+KG + +  K   V + M ENG  P+ VT+N
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK---VVEQMSENGCNPDIVTYN 446

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           ++IDG C +  I  AM++   + S+G    +VT+N+L+ GLC   + ++A  L   MM S
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
              P+  T N +I   C+K L+ +A      ++E G  P+  TYN ++DA  K G+ ++A
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M +    PD+ TYN +I+ +++ G +E   +++  +V+NG+    +TY  L   
Sbjct: 567 LKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +C++  + +A+ +L    +++     P+   YN ++ GFCQ  + + A      ++  G 
Sbjct: 625 ICREDGTDRAIRML---CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGC 681

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +P+++TY I+ E +  +  + + +  + N+
Sbjct: 682 MPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 149/296 (50%), Gaps = 5/296 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  ++  + G    +++ N ++  L  E   +D   +   ++    + ++ +FN +L 
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC   +   A  +M +M      P   T+N +I   C+KG    + +A    K M ENG
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG---LLLQAIETLKIMAENG 542

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            +PN+ T+N ++D   K      A+K+   M ++G    ++TYN++I+ +   GK++EA+
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGM-TNG-TPDLITYNTVISNITKAGKMEEAL 600

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L   M+++GL P+ +T  +L  G C++   ++A  +   + + GLSP    YN ++  +
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           C+  R + A      M+  G +PD STY  L+  L+ E  ++  + ++  L + G+
Sbjct: 661 CQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 34/342 (9%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   R   YG K   ++   +L+ L    ++E  E +  EM       +  +FN V+ 
Sbjct: 356 AVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIA 415

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK--------------------- 233
            LC+ G +++A  ++E M   G +P +VTYN +IDG C                      
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 234 ---------KG--GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                    KG   + +   A+ +  +M+ +   P+  TFNT+I   C+   +  A++  
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           + M  +G      TYN +++ L   GK  EA+ L   M  +   P+++T N +I+   K 
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKA 593

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +E+A  L   +   GLSP  ITY +L    C+E   + A  M   + D G+ PD + Y
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           N ++ G  +    +   +    +V++G      TY IL+ AL
Sbjct: 654 NDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 5/262 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E       YG K  +++ N LL+ L    ++ED E +   M       +  +FN V+ 
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G L +A + ++ M   G  P   TYNI++D   K G   K  +A  +   M  NG
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG---KTQEALKLLSGMT-NG 576

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ +T+NT+I    K   +  A+ +   M S+G++   +TY SL  G+C +   D A+
Sbjct: 577 T-PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   +   GL P+    N ++ GFC+    + A   F  +   G  P   TY  L++A 
Sbjct: 636 RMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695

Query: 375 CKEGRMEDAFAMRNSMLDRGVL 396
             E  +++A  +  ++   GVL
Sbjct: 696 AYECLLDEAKQLLVNLCSLGVL 717


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 249/508 (49%), Gaps = 47/508 (9%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIF---HALSTCSDSLCRNSIIIDML 122
           L   +V  K  P   SF   L   V    ++SV +IF   H L    D+   ++++    
Sbjct: 59  LFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCC 118

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           ++      +  LGF         G+  + ++   L+R L  E K +D  +++K++ R  I
Sbjct: 119 LMH-----RTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 183 -ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG------ 235
            E +   +  V++GLCK G   KA D++  M+     P    YNI+ID +CK G      
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233

Query: 236 -----------------------GIGKMYKADAV---FKDMVENGILPNEVTFNTLIDGF 269
                                  G+GK+ + + V   F +M+   I P+  TFN++IDG 
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  +  A ++   M   G+    +TYN +++G C+ G++  A  + D M+  G++P++
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDI 353

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           ++  ALING+ +KK ++KA  LF +IS+ GL PS++T + L+    + GR E A    + 
Sbjct: 354 ISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDE 413

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G +P++ T+  L+ G  + G VE   +  ++L        +  Y  ++  LCK+GK
Sbjct: 414 MQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGK 473

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             KA +  +   K+      P+++TY  +I G+CQ+G L++A  +L ++ + G +P+  T
Sbjct: 474 LDKAHATFE---KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRT 530

Query: 510 YQIVREEMMEKGFIPDIEGHMYNISGTS 537
           Y ++         + +++  +  I+G S
Sbjct: 531 YNVIVRGFFRSSKVSEMKAFLKEIAGKS 558



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 168/336 (50%), Gaps = 38/336 (11%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   +++   L+  L K  ++E V  ++ EM    I  ++ +FN V++GLCK GK+  A 
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +IM  M   GV P  +TYN+++DGYC +G +G+   A  +F  M++ GI P+ +++  LI
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGR---ARRIFDSMIDKGIEPDIISYTALI 360

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+ + + +  AM++F E+  +G+   +VT + L+ GL   G+ + A    DEM A+G  
Sbjct: 361 NGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHI 420

Query: 327 PNVVTS-----------------------------------NALINGFCKKKLVEKARVL 351
           PN+ T                                     A+ING CK   ++KA   
Sbjct: 421 PNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHAT 480

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+ +   GL P VITY  +I  YC+EG +++A  M   M D G LPD  TYN ++ G  R
Sbjct: 481 FEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFR 540

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
              V  ++  + E+          T  +L+  + +D
Sbjct: 541 SSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAED 576



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 159/315 (50%), Gaps = 41/315 (13%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG---------------- 286
           A ++F+ MV    LP+ V+F+ L+      ++ S+ + +F E+                 
Sbjct: 56  AFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVN 115

Query: 287 -------------------SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL-K 326
                                GI    VT+ +LI GL  + K+ +AV L  +++   + +
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS-PSVITYNTLIDAYCKEGRMEDAFA 385
           P+ V    +++G CKK   +KA  L   + EQG++ P    YN +IDA+CK+G ++ A +
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLL-RLMEQGITKPDTCIYNIVIDAFCKDGMLDGATS 234

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M  + + PD+ TY  LI GL +    E VR +  E+++  +   + T+N ++  LC
Sbjct: 235 LLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLC 294

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK + A  ++  M +   E   PN +TYNV++ G+C +G++  A  + + +++KG+ P
Sbjct: 295 KEGKVEDAEEIMTYMIEKGVE---PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEP 351

Query: 506 NQTTYQIVREEMMEK 520
           +  +Y  +    +EK
Sbjct: 352 DIISYTALINGYVEK 366



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 38/224 (16%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK--- 178
           L+  YV+  K     + F+     GLK S+++C+ LLR L + G+ E  +  + EM+   
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418

Query: 179 --------------------------------RRRIELNLDSFNFVLNGLCKAGKLNKAS 206
                                           RRR + N+  +  V+NGLCK GKL+KA 
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              E +  +G+ P V+TY  +I GYC++G + +   A  + + M +NG LP+  T+N ++
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE---AKDMLRKMEDNGCLPDNRTYNVIV 535

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
            GF +   +S      +E+     +    T   L++ +  D  L
Sbjct: 536 RGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++DAF++   M+    LP   +++ L+  L    +   V +I  E+    +       + 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +V + C   ++    S+L   FK    K  P N VT+  LI+G   + K++DA  L  +L
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFK----KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 499 LEKGLI-PNQTTYQIVREEMMEKG 521
           + + +  P++  Y  V + + +KG
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKG 192


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 252/516 (48%), Gaps = 70/516 (13%)

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTC 108
           T  + A+H+L       H ++ +   P + SF H+     K    S +F       LS  
Sbjct: 45  TGNVTATHAL----HFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S   C  +I+++ L    V  ++   GF AF      G   ++++ N L++ L  E +  
Sbjct: 101 SSDRCTLNILLNCL--CNVNRLRE--GFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 169 DVEYVYKEMKR-------------------------------------RRIELNLD---- 187
           +   ++  M++                                      R E+N      
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLG----------VSPKVVTYNILIDGYCKKGGI 237
           ++N +++GLCK G+ ++A  + E+MK+ G          + P +VT+N+LID  CK+G  
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG-- 274

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            K+ +A  +   M+E+GI+P+ VT+N+LI+GFC   ++++A ++F  M S G    V++Y
Sbjct: 275 -KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 333

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N LING     K++EA+ L +EM+  G +PNV+T ++L+ G      V+ A+ LF  +  
Sbjct: 334 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 393

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G++ +  TY   +D  CK   + +A  +   +       ++   NCLI GL + G +E 
Sbjct: 394 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 453

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  +L N G    +VTY I++   C++G+  KA  L+    KME     P+I+TYN 
Sbjct: 454 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ---KMEANGCTPDIITYNT 510

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           L++GF +  KLE+   LL+ + +K + P+  T  IV
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 242/509 (47%), Gaps = 50/509 (9%)

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI--FHALSTCSDSLCRNSIIIDML 122
           L+    HS  +    P+I  FL    K G  T+   +  FH +   + +   +S    + 
Sbjct: 19  LSSLFTHSSAIPSPNPQIAFFLR-HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLS 77

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            LA +K+      F  + +    GL S   + N LL  L    +  +    +  + RR  
Sbjct: 78  GLAKIKHYSQ--VFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGY 135

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             N+ ++N ++ GLC   ++++A+ +   M+ LG +P VVTY  LI G C  G I    K
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195

Query: 243 -ADAVFKDM--VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS----------HG 289
               +  D+   E    PN +T+N ++DG CK      A ++FEEM +           G
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQG 255

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   +VT+N LI+ LC +GK+ EA  L   M+ SG+ P++VT N+LI GFC    +  AR
Sbjct: 256 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 315

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF  +  +G  P VI+YN LI+ Y K  ++E+A  + N ML  G  P+V TY+ L+ G+
Sbjct: 316 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----FKME- 464
              G V+  + + + +  +G+     TY I +  LCK+    +A+ L  E+    FK+E 
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 435

Query: 465 ---------------KEKKW------------PNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                           E  W            PN+VTY ++I GFC++G+++ AN L+ +
Sbjct: 436 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 495

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           +   G  P+  TY  +     E   + ++
Sbjct: 496 MEANGCTPDIITYNTLMRGFYESNKLEEV 524



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 190/365 (52%), Gaps = 12/365 (3%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG-------DYGLKSSVLSCNQLLRA 160
           C  ++   +II+D L     ++    L FE  K  G       D GL+  +++ N L+  
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQL-FEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L KEGK  + + +   M    I  +L ++N ++ G C  G LN A ++   M S G  P 
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 329

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V++YN+LI+GY K     K+ +A  ++ +M+  G  PN +T+++L+ G      +  A K
Sbjct: 330 VISYNVLINGYSKTL---KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 386

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F  M +HGIA    TY   ++GLC +  L EA+ L  E+ +S  K  +   N LI+G C
Sbjct: 387 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 446

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +E A  LF+ +S +G  P+V+TY  +I  +C+EG+++ A  +   M   G  PD+ 
Sbjct: 447 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 506

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN L+ G      +E V  +++ +    +    +T +I+V  L KD K ++ + LL   
Sbjct: 507 TYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR- 565

Query: 461 FKMEK 465
           F ++K
Sbjct: 566 FPIQK 570


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 229/423 (54%), Gaps = 10/423 (2%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKR---AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++D  + AYV   +PHL F+ F+             V + N L++ L  EGK ++   V 
Sbjct: 101 LLDTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAIRVR 160

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCK 233
            EM+  ++  ++ ++N +++G  K     +   ++E+MKS G V P  VT+NI++  + K
Sbjct: 161 DEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGK 220

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G I +   +DAV K MVE+G+ P+  T+NT+I+GFCK   +  A ++ +EM   G+   
Sbjct: 221 EGKINEA--SDAVVK-MVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPD 277

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           + T N++++ LC++ K +EA  L  +    G   + VT   LI G+ K K  +KA  L++
Sbjct: 278 ICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWE 337

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++ ++G+ PSV++YN LI   C  G+ + A    N +L++G++PD  + N +I G   EG
Sbjct: 338 EMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEG 397

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V+      N++V N  +  + T NIL+  LC+    +KA  L +     +      ++V
Sbjct: 398 MVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNS---VDVV 454

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           TYN +I   C++G+L++A  L+ ++  K   P+Q TY  +   +   G   + E  M  +
Sbjct: 455 TYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKL 514

Query: 534 SGT 536
           S T
Sbjct: 515 SET 517


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 238/461 (51%), Gaps = 12/461 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L   +V  K  P + SF   L   V    ++SV ++F  +      +  +  I+ +++ +
Sbjct: 59  LFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPV--HEFILSIVVNS 116

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-EL 184
                +  LGF         G+  + ++   L+R L  E K +D  +++K++ R  I E 
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEP 176

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   +  V+NGLCK G   KA D++  M+     P   TY I+ID +CK G +     A 
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD---GAT 233

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++  +M +  I P+  T++TLID  CK         +F EM    I   V T+NS+I+GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +GK+++A  +   M+  G+ P+V+T N +I+G+  +  V++AR +FD +  + + P +
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I+YN LI+ Y ++ ++++A  +   +  +G+ P + T N L+ GL   G  +  +N  +E
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +++ G    L T+  L+G   K+G  ++A+S      K+E+ ++  NI  Y  +I G C+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMS---HFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            GKL+ A+    +L   GL P+  TY  +     ++G + +
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 211/425 (49%), Gaps = 10/425 (2%)

Query: 110 DSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           +++C  N ++   +M    K       F+  +       K +  +   ++ A  K+G  +
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  EMK++ I  ++ +++ +++ LCK  +      +  +M  L + P V T+N +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DG CK+   GK+  A+ + + M+E G+ P+ +T+N +IDG+     +  A ++F+ M + 
Sbjct: 291 DGLCKE---GKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK 347

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
            I   +++YN LING     K+DEA+ +  E+   GLKP++VT N L++G  +    + A
Sbjct: 348 SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSA 407

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           +  FD++   G  P + T+ TL+  Y K G +E+A +  + +  R    ++  Y  +I G
Sbjct: 408 QNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDG 467

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + G ++       +L   G+   ++TY  ++   C++G   +A  +L    KME    
Sbjct: 468 LCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR---KMEDNGC 524

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             +  TYNV+++GF +  K+ +    L E+  K       T +++ + + E    P I  
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED---PSITR 581

Query: 529 HMYNI 533
            M+ I
Sbjct: 582 KMHWI 586



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 4/272 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++F+ MV    LP+  +F+ L+      ++ S+ + +F E+    I       + ++N
Sbjct: 56  AFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL-S 361
             C+  + D   ++       G+  N VT   LI G   +  V+ A  LF  +  + +  
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ + Y T+++  CK+G  + AF +   M      P+  TY  +I    ++G ++G  ++
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +NE+    +   + TY+ L+ ALCK  + +   +L  EM  +     +PN+ T+N +I G
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL---NIYPNVCTFNSVIDG 292

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            C++GK+EDA  ++  ++EKG+ P+  TY ++
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMI 324



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 4/202 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A +L  +M+ +   P+V + + L+      K       LF +I +  +       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN-N 428
           ++++ C   R +  F++      +G+  +  T+  LI GL  E  V+   ++  +LV  N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
                 V Y  ++  LCK G ++KA  LL     ME+    PN  TY ++I  FC+ G L
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLR---LMEQGSTKPNTRTYTIVIDAFCKDGML 229

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           + A  LLNE+ +K + P+  TY
Sbjct: 230 DGATSLLNEMKQKSIPPDIFTY 251


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 214/408 (52%), Gaps = 25/408 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F +    G +  V++   L+  L K G       +   M ++  + N+ ++N +++
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  ++ +A ++  +M + G+SP + TYN LI   C    + +      +  +MV++ 
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC---NLCEWKHVATLLNEMVDSK 266

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+P+ V+FNT++D  CK+  ++ A  V ++M   G+   VVTY +L++G C+  ++DEAV
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEK-------------------ARVLFDDI 355
            + D M+  G  PNV++ N LING+CK + ++K                   A  +FD +
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +G  P+VI+YNTLI+ YCK  R++ A  +   M  + ++PD  TY+ LI GL     +
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    + +E+V       LVTY IL+  LCK+    +A++LL     +E     P+I   
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK---AIEGSNLDPDIQVN 503

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           N+ I G C+ G+LE A  L + L  KGL P+  TY I+   +  +G +
Sbjct: 504 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 551



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 222/438 (50%), Gaps = 39/438 (8%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A +T  DSLC++  + +               F  F      G+   + + N L+ AL  
Sbjct: 203 AYNTIIDSLCKDRQVTE--------------AFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             +++ V  +  EM   +I  ++ SFN V++ LCK GK+ +A D+++ M   GV P VVT
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE---------- 273
           Y  L+DG+C    + +M +A  VF  MV  G +PN +++NTLI+G+CK +          
Sbjct: 309 YTALMDGHCL---LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTX 365

Query: 274 ---------NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
                    N+  A+KVF+ M   G    V++YN+LING C   ++D+A+ L  EM    
Sbjct: 366 LMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L P+ VT + LI+G C  + ++ A  LF ++      P+++TY  L+D  CK   + +A 
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 485

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           A+  ++    + PD+   N  I G+ R G +E  R++ + L + G++  + TY+I++  L
Sbjct: 486 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 545

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G   +A  L  EM   ++     N   YN + +GF +  +   A  LL E++ +G  
Sbjct: 546 CRRGLLDEASKLFREM---DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602

Query: 505 PNQTTYQIVREEMMEKGF 522
            + +T  +  + + + G 
Sbjct: 603 ADASTMTLFVKMLSDDGL 620



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 219/435 (50%), Gaps = 26/435 (5%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           +L  +  MK H    +     D +G+  ++ + + L+ +     +      V  ++ +  
Sbjct: 67  LLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLG 126

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            + +  +F  ++ G+C  GK+ +A  + + M   G  P VVTY  LI+G CK   +G   
Sbjct: 127 HQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK---VGNTS 183

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +   MV+    PN   +NT+ID  CKD  ++ A  +F EM + GI+  + TYNSLI
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + LC   +      L +EM+ S + P+VV+ N +++  CK+  V +A  + D + ++G+ 
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG-------- 413
           P+V+TY  L+D +C    M++A  + ++M+ +G +P+V +YN LI G  +          
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363

Query: 414 -----------NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
                      N++    + + +V  G    +++YN L+   CK  +  KA+ L  EM +
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            E     P+ VTY+ LI G C   +L+DA  L +E++    IPN  TY+I+ + + +  +
Sbjct: 424 QEL---IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 480

Query: 523 IPDIEGHMYNISGTS 537
           + +    +  I G++
Sbjct: 481 LAEAMALLKAIEGSN 495



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 195/392 (49%), Gaps = 19/392 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S +  N+LL ++ K      +  +  +M    I  N+ + + ++N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   ++  A  ++  +  LG  P   T+  LI G C +G IG+   A  +F  M+  G
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE---ALHLFDKMIGEG 161

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ VT+ TLI+G CK  N SAA+++   M        V  YN++I+ LC D ++ EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P++ T N+LI+  C     +    L +++ +  + P V+++NT++DA 
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TY  L+ G      ++    + + +V  G    +
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 435 VTYNILVGALCKDGKSKKAVSL------------LDEMFK----MEKEKKWPNIVTYNVL 478
           ++YN L+   CK  +  KA+              +DE  K    M  +   PN+++YN L
Sbjct: 342 ISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTL 401

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I G+C+  +++ A  L  E+  + LIP+  TY
Sbjct: 402 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 433



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 207/415 (49%), Gaps = 27/415 (6%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDM 121
           RLL S+V     P + ++   +    K+ + T    +F  + T     D    NS+I  +
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
             L   K++   L         D  +   V+S N ++ AL KEGK  +   V  +M +R 
Sbjct: 247 CNLCEWKHVATLLN-----EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-- 239
           +E N+ ++  +++G C   ++++A  + + M   G  P V++YN LI+GYCK   I K  
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361

Query: 240 --------------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
                         M +A  VF  MV  G +PN +++NTLI+G+CK + I  AM +F EM
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 421

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +    VTY++LI+GLC   +L +A+AL  EM+A    PN+VT   L++  CK + +
Sbjct: 422 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 481

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  L   I    L P +   N  ID  C+ G +E A  + +++  +G+ PDV TY+ +
Sbjct: 482 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 541

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I GL R G ++    +  E+  NG       YN +     ++ ++ +A+ LL EM
Sbjct: 542 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 13/275 (4%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  +  N      + FNT IDG         A+  F  M         V +N L+  +  
Sbjct: 24  FLSLSHNRFHSKSLHFNT-IDG---------AISSFNRMLRMQPPPSTVDFNKLLTSIAK 73

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
                  ++L  +M + G+ PN+ T + LIN FC    V  A  +   I + G  P   T
Sbjct: 74  MKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTAT 133

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI   C EG++ +A  + + M+  G  PDV TY  LI GL + GN      ++  +V
Sbjct: 134 FTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 193

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
               +  +  YN ++ +LCKD +  +A +L  EM     +   P+I TYN LI   C   
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV---TKGISPDIFTYNSLIHALCNLC 250

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + +    LLNE+++  ++P+  ++  V + + ++G
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 234/458 (51%), Gaps = 13/458 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS--LCRNSIIIDMLMLA 125
           RLLH        P I  F  +     K    ST+  +LST  DS  +  N   +++L+ +
Sbjct: 55  RLLH----MHPPPSIVDFAKLLTSIAKMKHYSTVL-SLSTQMDSFGVPPNVYTLNILINS 109

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           +    +    F    +    G +    +   L+R L  EGK  +  +++ +M     + N
Sbjct: 110 FCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPN 169

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + ++  ++NGLCK G  + A  ++  M+     P VV Y  +ID  CK   + + +    
Sbjct: 170 VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN--- 226

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F  MV  GI P+  T+ +L+   C          +  +M +  I   VV ++++++ LC
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +GK+ EA  + D M+  G++P+VVT   L++G C +  +++A  +FD +  +G +P VI
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +Y TLI+ YCK  +++ A  +   M  +  +PD  TYN L+ GL   G ++    + +E+
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G    LVTY+IL+ +LCK+   ++A++LL     +E     P+I  YN++I G C+ 
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLK---AIEASNLNPDIQVYNIIIDGMCRA 463

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G+LE A  L + L  KGL P+  TY I+   + ++G +
Sbjct: 464 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 501



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 194/369 (52%), Gaps = 4/369 (1%)

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLML-AYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           K  + S     L +     C+  ++I   ++ +  K+ +    F  F +    G+   + 
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +   L+ AL    +++ V  +  +M   +I  ++  F+ V++ LCK GK+ +A +I++ M
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
              GV P VVTY  L+DG+C +    +M +A  VF  MV  G  P+ +++ TLI+G+CK 
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQ---SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             I  AM +FEEM          TYN+L+ GLC  G+L +A+AL  EM+A G  P++VT 
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + L++  CK + +E+A  L   I    L+P +  YN +ID  C+ G +E A  + +++  
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G+ P V TYN +I GL + G +     +  E+  N       TYN +     ++ ++ +
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538

Query: 453 AVSLLDEMF 461
           A+ LL+EM 
Sbjct: 539 AIQLLEEML 547



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 148/295 (50%), Gaps = 19/295 (6%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V F  L+    K ++ S  + +  +M S G+   V T N LIN  C   ++  A ++
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G +P+  T   LI G C +  + +A  LFD + ++G  P+V+TY TLI+  CK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G    A  +  SM      PDV  Y  +I  L ++  V    N+ +++V  G+   + T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  LV ALC   + K   +LL++M      K  P++V ++ ++   C++GK+ +A+ +++
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMV---NSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            ++++G+ P+  TY                  V + M+ KGF PD+  +   I+G
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 354



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 33/336 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI------IIDML 122
           L+H+L    ++  + + L+  V N K      IF   ST  D+LC+         I+DM+
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMV-NSKILPDVVIF---STVVDALCKEGKVTEAHEIVDMM 301

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +                      G++  V++   L+     + + ++   V+  M R+  
Sbjct: 302 I--------------------QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             ++ S+  ++NG CK  K++KA  + E+M      P   TYN L+ G C    +G++  
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCH---VGRLQD 398

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+F +MV  G +P+ VT++ L+D  CK+ ++  AM + + + +  +   +  YN +I+
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G+C  G+L+ A  L   + + GL P+V T N +I+G CK+ L+ +A  LF ++     SP
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
              TYNT+   + +      A  +   ML RG   D
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A++  + ++     P++V    L+    K K       L   +   G+ P+V T N 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+++C   R+  AF++   +L  G  PD +T+  LI GL  EG +    ++ +++++ G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY  L+  LCK G +  A+ LL     ME+    P++V Y  +I   C+  ++ 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLR---SMEQGNCQPDVVIYTSIIDSLCKDRQVT 222

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L ++++ +G+ P+  TY
Sbjct: 223 EAFNLFSQMVGQGISPDIFTY 243


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 208/410 (50%), Gaps = 47/410 (11%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL----NLDSFNFV 192
            A  R     +  +  +CN +L  L +  +          + RR  +L    N+ +FN V
Sbjct: 155 RALARVRQLRVPPNTRTCNHILLRLARNRQ--------GGLVRRLFDLLPVPNVFTFNIV 206

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------- 237
           ++ LCK G+L +A  +   MK++G SP VVTYN LIDGY K G +               
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGC 266

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G+M KA + F +M   G++ N VTF+T +D FCK+  +  AMK
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMK 326

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F +M   G+     TY SL++G C  G+LD+A+ L DEM+  GL PNVVT   +++G C
Sbjct: 327 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 386

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  V +A  +   +   G+  + + Y TLI  +      E A  + N M ++G+  DVS
Sbjct: 387 KEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVS 446

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            Y  LI GL ++  V+  +++++++   G+R   V Y  ++ AL K GK  +AV+LL   
Sbjct: 447 LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL--- 503

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            K+      PN+VTY  LI G C+ G + +A    N++ E GL PN   Y
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 221/432 (51%), Gaps = 7/432 (1%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEA 138
           P + ++  +    GK   +  +   +S    S C   ++  + L+  + K  +    +  
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G+ ++V++ +  + A  KEG  ++   ++ +M+ R +  N  ++  +++G CK
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AG+L+ A  ++++M   G+ P VVTY +++DG CK+G   K+ +AD V   M   G+  N
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG---KVAEADNVLSLMERGGVKAN 409

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E+ + TLI G   + N   A+ +  +M + G+   V  Y +LI GLC D K+DEA +L  
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M   GL+PN V    +++   K     +A  L   I + G  P+V+TY  LID  CK G
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG 529

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            + +A +  N M + G+ P+V  Y  LI G  + G++    ++MNE+++ GM    V Y 
Sbjct: 530 SISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYT 589

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+    K    + A +L     KM +     ++  Y   I GFC    +++A G+L+E+
Sbjct: 590 SLIDGYMKQANLQDAFAL---KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646

Query: 499 LEKGLIPNQTTY 510
           +  G+ P++T Y
Sbjct: 647 IGTGITPDKTVY 658



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G    V++ N L+    K G  E+VE +  EM++     ++ ++N ++N   K
Sbjct: 223 FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSK 282

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ KA     +MK  GV   VVT++  +D +CK+G + +  K   +F  M   G++PN
Sbjct: 283 FGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMK---LFAQMRVRGMMPN 339

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T+ +L+DG CK   +  A+ + +EM   G+   VVTY  +++GLC +GK+ EA  +  
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M   G+K N +    LI+G       E+A  L + +  +G+   V  Y TLI   CK+ 
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++++A ++ + M   G+ P+   Y  ++  L + G       ++++++++G +  +VTY 
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC 519

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK G   +A+S  ++M ++  +   PN+  Y  LI GFC+ G L  A  L+NE+
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLD---PNVQAYTALIDGFCKIGSLNKAMHLMNEM 576

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++KG+  ++  Y  + +  M++  + D
Sbjct: 577 IDKGMSLDKVVYTSLIDGYMKQANLQD 603



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 26/398 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  + V++ N L+    K G+ E     + EMKR+ +  N+ +F+  ++  CK G + +A
Sbjct: 265 GCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEA 324

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M+  G+ P   TY  L+DG CK G   ++  A  +  +MV  G++PN VT+  +
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAG---RLDDAIVLLDEMVHQGLVPNVVTYTVM 381

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK+  ++ A  V   M   G+ A  + Y +LI+G  ++   + A+ L ++M   G+
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + +V     LI G CK + V++A+ L   ++  GL P+ + Y T++DA  K G+  +A A
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + +LD G  P+V TY  LI GL + G++    +  N++   G+   +  Y  L+   C
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561

Query: 446 KDGKSKKAVSLLDEMFK--MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           K G   KA+ L++EM    M  +K     V Y  LI G+ ++  L+DA  L  +++E GL
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDK-----VVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD 525
             +   Y                  V  EM+  G  PD
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 654



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 184/364 (50%), Gaps = 43/364 (11%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN--ILIDGYCKKGGIGKMYKADAVFKD 249
           +L+ L   G L+ A   +  ++ L V P   T N  +L     ++GG+          + 
Sbjct: 140 LLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL---------VRR 190

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           + +   +PN  TFN +ID  CK+  +  A  +F  M + G +  VVTYNSLI+G    G 
Sbjct: 191 LFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGD 250

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+E   L  EM  SG   +VVT NALIN F K   +EKA   F ++  QG+  +V+T++T
Sbjct: 251 LEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFST 310

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            +DA+CKEG +++A  +   M  RG++P+  TY  L+ G  + G ++    +++E+V+ G
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370

Query: 430 MRAGLVTYNILVGALCKDGKSKKA---VSL-----------------------------L 457
           +   +VTY ++V  LCK+GK  +A   +SL                             L
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           D + +M+ +    ++  Y  LI G C+  K+++A  LL+++   GL PN   Y  + + +
Sbjct: 431 DLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490

Query: 518 MEKG 521
            + G
Sbjct: 491 FKAG 494



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 168/315 (53%), Gaps = 3/315 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  +V++   ++  L KEGK  + + V   M+R  ++ N   +  +++G        +A
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERA 429

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  MK+ G+   V  Y  LI G CK     K+ +A ++   M   G+ PN V + T+
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQ---KVDEAKSLLHKMAGCGLRPNTVIYTTI 486

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D   K    S A+ +  ++   G    VVTY +LI+GLC  G + EA++  ++M   GL
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV    ALI+GFCK   + KA  L +++ ++G+S   + Y +LID Y K+  ++DAFA
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           ++  M++ G+  D+  Y C I+G      ++  R +++E++  G+      YN L+    
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQ 666

Query: 446 KDGKSKKAVSLLDEM 460
           K G  ++A SL +EM
Sbjct: 667 KLGNMEEASSLQNEM 681



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 3/201 (1%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PNV T N +I+  CK+  + +AR LF  +   G SP V+TYN+LID Y K G +E+   +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M   G   DV TYN LI   S+ G +E   +   E+   G+ A +VT++  V A CK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G  ++A+ L  +M         PN  TY  L+ G C+ G+L+DA  LL+E++ +GL+PN
Sbjct: 318 EGLVQEAMKLFAQM---RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
             TY ++ + + ++G + + +
Sbjct: 375 VVTYTVMVDGLCKEGKVAEAD 395



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+    +    L+   +K+   +D   +  +M    ++L+L  +   ++G C    + 
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           +A  ++ +M   G++P    YN LI  Y K   +G M +A ++  +M
Sbjct: 638 EARGVLSEMIGTGITPDKTVYNCLIRKYQK---LGNMEEASSLQNEM 681


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 219/416 (52%), Gaps = 27/416 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K     G      +  +++  L +  K E    +++EMKR  +  ++ ++  +++
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CKAG + +A    ++M+S+G SP VVTY  L+  Y K     ++ +A  +F  MV+  
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSK---QLIQAHDIFHRMVDAA 552

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHG---------------IAAGVVTYN 298
             PN VT++ LIDG CK   I  A +V+E++ G+ G               IA  VVTY 
Sbjct: 553 CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYG 612

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI+GLC   K+ +A  L D M+A+G +PN +  +ALI+GFCK   ++ A+ +F  +++ 
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC 672

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  PSV TY +LID   K+GR++ A  + + ML+    P+V TY  +I GLS+ G +E  
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKA 732

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N+++ +   G    +VTY  L+  L K GK+  ++ L  +   M  +   PN VTY VL
Sbjct: 733 LNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ---MNSKGCAPNYVTYRVL 789

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK-----GFIPDIEGH 529
           I   C  G L++A+ LL+E+       +   Y    +   +K     G + ++E H
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESH 845



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 196/423 (46%), Gaps = 43/423 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G   +V++   LL A +K  +      ++  M       N  +++ +++GLCK
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 199 AGKLNKASDIMEDM----------------KSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           AG++ KA ++ E +                 +  ++P VVTY  LIDG CK     K+  
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ---KVSD 626

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +   M+  G  PN++ ++ LIDGFCK   I  A +VF  M   G    V TY SLI+
Sbjct: 627 AHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLID 686

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            +  DG+LD A+ +  EM+     PNVVT  A+I+G  K   +EKA  L   + E+G SP
Sbjct: 687 RMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V+TY  LID   K G+ + +  +   M  +G  P+  TY  LI      G ++    ++
Sbjct: 747 NVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+ +      L  Y+  V      G SKK ++ L  + +ME  +  P    Y +LI  F
Sbjct: 807 DEMKHTHWPKHLQGYHCAV-----QGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSF 861

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI-------------------VREEMMEKGFI 523
            + G+LE A  L  EL+E     N T+  +                   +  EM  KG +
Sbjct: 862 SKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIV 921

Query: 524 PDI 526
           PD+
Sbjct: 922 PDL 924



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/592 (24%), Positives = 229/592 (38%), Gaps = 125/592 (21%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P L +R+F W+ +++  SH    TG    +L     +          ++         + 
Sbjct: 114 PELCVRFFLWAERQVGYSH----TGACYDALAEILGFEDPARTAERLLREIGEDDREVLR 169

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             L+      CR+ +  + L              E   R  D+G + S ++ N L++ L 
Sbjct: 170 RLLNVLVRRCCRHGLWDEAL--------------EELGRLKDFGYRPSAVTYNALVQVLA 215

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK--------------------- 201
             G+ E    V KEM      ++  +  +    LCK G+                     
Sbjct: 216 SAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCT 275

Query: 202 -----------LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
                       N+A   +  M+     P VVTY  L+ G+ KK   G   +   +   M
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKR---IINMM 332

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD--- 307
           +  G  PN   FN+L+ G+C   + + A K+F  M + G   G V YN  I  +C     
Sbjct: 333 MTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEEL 392

Query: 308 --------------------------------------GKLDEAVALRDEMMASGLKPNV 329
                                                 GK ++A  +  EMM  G  P+ 
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT 452

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   +I   C+ K VEK+ +LF ++   G++P V TY  LID++CK G +E A +  + 
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G  P+V TY  L+    +   +    +I + +V+       VTY+ L+  LCK G+
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572

Query: 450 SKKAVSLLDEM----------FKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLN 496
            +KA  + +++          F  E        PN+VTY  LI G C+  K+ DA+ LL+
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632

Query: 497 ELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYN 532
            +L  G  PNQ  Y                Q V   M + G++P +  H Y 
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSV--HTYT 682



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 180/391 (46%), Gaps = 22/391 (5%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   LL   +K+ +F   + +   M       N   FN +++G C AG    A  + 
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD---AVFKDMVENGILPNEVTFNTLI 266
             M + G  P  V YNI I   C +  +      D    V+++M+    + N+V      
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS 424

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
              C       A ++ +EM   G      TY  +I  LC   K++++  L  EM  +G+ 
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+V T   LI+ FCK  L+E+AR  FD++   G SP+V+TY  L+ AY K  ++  A  +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG----------------M 430
            + M+D    P+  TY+ LI GL + G ++    +  +L+                   +
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTY  L+  LCK  K   A  LLD M     E   PN + Y+ LI GFC+ GK+++
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE---PNQIVYDALIDGFCKIGKIDN 661

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           A  +   + + G +P+  TY  + + M + G
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 23/405 (5%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           K  L F+  KRAG   +   V +   L+ +  K G  E     + EM+      N+ ++ 
Sbjct: 470 KSFLLFQEMKRAG---VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM---------- 240
            +L+   K+ +L +A DI   M      P  VTY+ LIDG CK G I K           
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586

Query: 241 ---YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
               ++D  F+      I PN VT+  LIDG CK + +S A ++ + M + G     + Y
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           ++LI+G C  GK+D A  +   M   G  P+V T  +LI+   K   ++ A  +  ++  
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN 706

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
              +P+V+TY  +ID   K G +E A  + + M ++G  P+V TY  LI GL + G  + 
Sbjct: 707 DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA 766

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYN 476
              +  ++ + G     VTY +L+   C  G   +A  LLDEM    K   WP ++  Y+
Sbjct: 767 SLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM----KHTHWPKHLQGYH 822

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             ++GF +  K   + GLL E+     +P    Y ++ +   + G
Sbjct: 823 CAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAG 865



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 14/301 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+  + K  K     E F R    G   SV +   L+  + K+G+ +    V 
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM       N+ ++  +++GL K G++ KA +++  M+  G SP VVTY  LID     
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALID----- 756

Query: 235 GGIGKMYKADA---VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            G+GK  KADA   +FK M   G  PN VT+  LI+  C    +  A  + +EM      
Sbjct: 757 -GLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWP 815

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +  Y+  + G     K   ++ L +EM +    P       LI+ F K   +E A  L
Sbjct: 816 KHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALEL 873

Query: 352 FDDISEQGLSPSVIT---YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             ++ E   S ++ +   Y +LI A C   ++E+AF +   M  +G++PD+  +  L+ G
Sbjct: 874 HKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKG 933

Query: 409 L 409
           L
Sbjct: 934 L 934



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 12/212 (5%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS ++   + +ID L     K  K     + FK+    G   + ++   L+      G  
Sbjct: 744 CSPNVVTYTALIDGLG----KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLL 799

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ++   +  EMK      +L  ++  + G  K  K   +  ++E+M+S    P    Y +L
Sbjct: 800 DEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGML 857

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT---FNTLIDGFCKDENISAAMKVFEE 284
           ID + K G   ++  A  + K++VE     N  +   + +LI   C    +  A  ++ E
Sbjct: 858 IDSFSKAG---RLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTE 914

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           M   GI   ++ + SL+ GL    K DEA+ L
Sbjct: 915 MTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 231/457 (50%), Gaps = 60/457 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRR 180
           LM  +V+            R  + G  ++ ++ N L+    K G+ ED + Y+ +E+   
Sbjct: 130 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 189

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             E +  ++N  +NGLC+   +  A  +M+ M   G  P V TYNI+++  CK G   ++
Sbjct: 190 -FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG---QL 245

Query: 241 YKADAVFKDMVENGILPNEVTFNTLI---------------------------------- 266
            +A  +   MV+ G LP+  TFNTLI                                  
Sbjct: 246 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 305

Query: 267 -DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +  CK  +   A+++FEEM + G     VTYN+LI+ LC  GKL +A+ L  +M ++G 
Sbjct: 306 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 365

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + +T N +I+G CKK  +E+A  +FD +  QG+S + IT+NTLID  CK+ +++DAF 
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+  G+ P+  TYN ++    ++G+++   +I+  +  NG    +VTY  L+  LC
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+++ A+ +L  M +++  +  P    YN +++   ++  + DA  L  E+ E G  P
Sbjct: 486 KAGRTQVALKVLRGM-RIKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 542

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  TY+IV                   EM++KGFIP+
Sbjct: 543 DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 219/409 (53%), Gaps = 6/409 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++++ + L+   V+  K  L    +   G  G+K  V++ N L++AL +  +      + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R +  +  +F  ++ G  + G +  A  +   M  +G S   VT N+LI+GYCK 
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK- 171

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G++  A    +  + +G  P+++T+NT ++G C+++++  A+KV + M   G    V
Sbjct: 172 --LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN ++N LC +G+L+EA  + ++M+  G  P++ T N LI   C    +E+A  L   
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 289

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G+SP V T+N LI+A CK G    A  +   M + G  PD  TYN LI  L   G 
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    +++ ++ + G     +TYN ++  LCK  + ++A  + D+   M+ +    N +T
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ---MDLQGISRNAIT 406

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +N LI G C+  K++DA  L+N+++ +GL PN  TY  +     ++G I
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 455



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 215/387 (55%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V + N ++  L K G+ E+ + +  +M  R    ++ +FN ++  LC   +L +A
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   +   GVSP V T+NILI+  CK   +G  + A  +F++M  +G  P+EVT+NTL
Sbjct: 284 LDLARQVTVKGVSPDVYTFNILINALCK---VGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C    +  A+ + ++M S G     +TYN++I+GLC   +++EA  + D+M   G+
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +T N LI+G CK K ++ A  L + +  +GL P+ ITYN+++  YCK+G ++ A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G   DV TY  LI GL + G  +    ++  +   GMR     YN ++ +L 
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG-KLEDANGLLNELLEKGLI 504
           +    + A+SL  EM ++ +    P+ +TY ++ +G C+ G  +++A   + E+++KG I
Sbjct: 521 RRNNIRDALSLFREMAEVGEP---PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577

Query: 505 PNQTTYQIVREEMMEKG----FIPDIE 527
           P  ++++++ E ++  G    FI  IE
Sbjct: 578 PEFSSFRMLAEGLLNLGMDDYFIRAIE 604



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +LN L +  K+     +  +M + G+ P VVT+N L+   C+     ++  A  + +
Sbjct: 57  YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH---QVRTAVLMLE 113

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G+ P+E TF TL+ GF ++ +I AA++V   M   G +A  VT N LING C  G
Sbjct: 114 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++++A+    + +A G +P+ +T N  +NG C+   V  A  + D + ++G  P V TYN
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +++  CK G++E+A  + N M+DRG LPD++T+N LIA L     +E   ++  ++   
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + T+NIL+ ALCK G    A+ L +E   M+     P+ VTYN LI   C  GKL
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEE---MKNSGCTPDEVTYNTLIDNLCSLGKL 350

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             A  LL ++   G   +  TY  + + + +K  I + E
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 146/282 (51%), Gaps = 12/282 (4%)

Query: 241 YKADAVFKDMVE---------NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           Y+   +F D V+          GI  + V +N L++   +   +     V+ EMG+ GI 
Sbjct: 27  YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 86

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             VVT+N+L+  LC   ++  AV + +EM + G+ P+  T   L+ GF ++  +E A  +
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G S + +T N LI+ YCK GR+EDA       +  G  PD  TYN  + GL +
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
             +V     +M+ +V  G    + TYNI+V  LCK+G+ ++A  +L++M         P+
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV---DRGCLPD 263

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           I T+N LI   C   +LE+A  L  ++  KG+ P+  T+ I+
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 305



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 23/257 (8%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--GLKPNVVTSNALINGFCKKKLV 345
           H +  GVV  +S ++        D+AV L    +    G++ + V  N L+N   +   +
Sbjct: 13  HQVKLGVV--HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 70

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +    ++ ++  +G+ P V+T+NTL+ A C+  ++  A  M   M  RGV PD +T+  L
Sbjct: 71  KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 130

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G   EG++E    +   ++  G  A  VT N+L+   CK G+ + A+  + +      
Sbjct: 131 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 190

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------ 513
           E   P+ +TYN  + G CQ   +  A  +++ ++++G  P+  TY IV            
Sbjct: 191 E---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 247

Query: 514 ----REEMMEKGFIPDI 526
                 +M+++G +PDI
Sbjct: 248 AKGILNQMVDRGCLPDI 264



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 4/227 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R++I  + ++    K M+     E F +    G+  + ++ N L+  L K+ K +D   +
Sbjct: 367 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ N  ++N +L   CK G + KA+DI+E M + G    VVTY  LI+G CK
Sbjct: 427 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 486

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+   A  V + M   G+ P    +N ++    +  NI  A+ +F EM   G    
Sbjct: 487 A---GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 543

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +TY  +  GLC   G + EA     EM+  G  P   +   L  G 
Sbjct: 544 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           + RN+I  + L+    K+ K    FE   +    GL+ + ++ N +L    K+G  +   
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 459

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + + M     E+++ ++  ++NGLCKAG+   A  ++  M+  G+ P    YN ++   
Sbjct: 460 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-ISAAMKVFEEMGSHGI 290
            ++  I     A ++F++M E G  P+ +T+  +  G C+    I  A     EM   G 
Sbjct: 520 FRRNNI---RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 576

Query: 291 AAGVVTYNSLINGL 304
                ++  L  GL
Sbjct: 577 IPEFSSFRMLAEGL 590



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR--GVLPDVSTYNCLI 406
           +VL  ++  +G    +   ++ +D+Y  +   +DA  +  + L    G+  D   YN L+
Sbjct: 2   KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 61

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L     ++ + ++ +E+   G++  +VT+N L+ ALC+  + + AV +L+EM      
Sbjct: 62  NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM---SSR 118

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+  T+  L++GF ++G +E A  +   +LE G    + T  ++     + G + D 
Sbjct: 119 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 178

Query: 527 EGHM 530
            G++
Sbjct: 179 LGYI 182


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 209/391 (53%), Gaps = 22/391 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++  ++L  ++V+ G +E V Y+ KE++   IE ++ S + ++N  C   +++    ++ 
Sbjct: 62  IVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +  LG+ P +VT+  L++G C +   GKM +   ++ DM+  G+ PN  T+N +I+   
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCME---GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K    + A+   ++M   G    VV Y++LI+G C+ G++DEA ++ D M++ G  PNV 
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T  +L+NG+CK + +E+A  L D+   +GL P ++T+ T+I   C+ GR   A  +   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  P++ TY  L+ GL + GN+E    +  E+  + ++  LV Y IL+ +LCK GK 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           K    L   +     E   PN+ TY  L+   C++G + +A+ L  ++ E G  P++  Y
Sbjct: 359 KDGKELFSRLI---DEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAY 415

Query: 511 QIV----------------REEMMEKGFIPD 525
            ++                 EEM+ +GF  D
Sbjct: 416 NVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 181/327 (55%), Gaps = 3/327 (0%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
            G     +    GL+ S+++   LL  L  EGK + V  +Y +M  R ++ N+ ++N ++
Sbjct: 115 FGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVII 174

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N L K+GK N+A   ++ M+ +G  P VV Y+ LIDGYC +   G+M +A +VF  MV  
Sbjct: 175 NSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLR---GQMDEARSVFDLMVSK 231

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN  T+ +L++G+CK E I  A+++ +E    G+   +VT+ ++I+GLC  G+   A
Sbjct: 232 GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAA 291

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L   + A G  PN++T   L++G CK   +E+A  LF ++    + P+++ Y  LID+
Sbjct: 292 QQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDS 351

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G+++D   + + ++D G+ P+V TY  L+  L +EG +     +  ++  +G    
Sbjct: 352 LCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEM 460
              YN+++    +      A  L++EM
Sbjct: 412 KCAYNVIIQGFLQHKDPSMARQLVEEM 438



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 5/268 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           LGF   K+    G   +V++ + L+      G+ ++   V+  M  +    N+ ++  ++
Sbjct: 187 LGF--LKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NG CK  ++ +A  ++++    G+ P +VT+  +I G C+    G+   A  +F+ +  +
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRA---GRPLAAQQLFRYICAH 301

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN +T+  L+DG CK  N+  A  +F+EM    +   +V Y  LI+ LC  GK+ + 
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L   ++  GLKPNV T  AL+   CK+ L+ +A  LF  + E G +P    YN +I  
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQG 421

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           + +      A  +   M++RG   D +T
Sbjct: 422 FLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 145/279 (51%), Gaps = 3/279 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A F+ M+    LP  V F+ L     +  +    + + +E+   GI   + + + LIN
Sbjct: 46  ALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILIN 105

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C   ++D  +++  +++  GL+P++VT   L+NG C +  +++  +L+DD+  +GL P
Sbjct: 106 CFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP 165

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V TYN +I++  K G+  +A      M   G +P+V  Y+ LI G    G ++  R++ 
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +V+ G    + TY  L+   CK  + ++AV LLDE     ++   P+IVT+  +I G 
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL---RKGLVPDIVTFTTIISGL 282

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           C+ G+   A  L   +   G  PN  TY ++ + + + G
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHG 321



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 19/241 (7%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D+A+A    M+     P +V  + L +   +    E    L  +I   G+   + + + L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ +C   R++   ++ + +L  G+ P + T+  L+ GL  EG ++ V  + ++++  G+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +  + TYN+++ +L K GK+ +A+  L +   MEK    PN+V Y+ LI G+C +G++++
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQ---MEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 491 ANGLLNELLEKGLIPNQTTY--------QIVR--------EEMMEKGFIPDIEGHMYNIS 534
           A  + + ++ KG  PN  TY        +I R        +E + KG +PDI      IS
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 535 G 535
           G
Sbjct: 281 G 281



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 4/172 (2%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           +P    + F+    +G   ++++   LL  L K G  E+   +++EM+R  ++ NL  + 
Sbjct: 287 RPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYT 346

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++ LCK GK+    ++   +   G+ P V TY  L+   CK+G I + +K   +F+ M
Sbjct: 347 ILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK---LFRKM 403

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
            E+G  P++  +N +I GF + ++ S A ++ EEM + G +A   T  +L+N
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLN 454



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%)

Query: 64  LLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSII 118
           L   +L   +      P I ++   L    K+G       +F  +  ST   +L   +I+
Sbjct: 289 LAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTIL 348

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ID L     K  K   G E F R  D GLK +V +   L+ AL KEG   +   ++++M+
Sbjct: 349 IDSL----CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                 +  ++N ++ G  +    + A  ++E+M + G S    T  +L D
Sbjct: 405 EDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 205/378 (54%), Gaps = 6/378 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+      D GL  +V+    L+    K G  E     + +M    +  N  +F  ++NG
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K G      D+ E MK  G+ P + TYN L++ YC   G GK+ +A  +F +M E G+
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYC---GEGKICRAFDLFDEMRERGV 298

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N VT+NTLI G C++E +  A K+ ++M    ++  ++TYN+LI G C  G LD+A +
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L D++ ++GL P++VT N LI G+ K    +    L  ++  +G+SPS +T   LIDAY 
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV 418

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           +   ME AF + +SM   G++PDV  Y  LI GL  +GN++    +   +    +    V
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN ++   CK+  S +A+ LL E   ME +   PN+ +Y+ +I   C+ GK E+A  LL
Sbjct: 479 IYNTMIHGYCKEDNSYRALRLLRE---MEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLL 535

Query: 496 NELLEKGLIPNQTTYQIV 513
           ++++E  L P+ +   ++
Sbjct: 536 DKMIELQLKPSASILNMI 553



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 218/456 (47%), Gaps = 45/456 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKN---GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           LL  L+   K P  +S +   + N     F +V ++ H L+   +     +++ + ++ A
Sbjct: 43  LLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINA 102

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           ++K+         F    D GL       N LL +LV+   FE     + E+K R     
Sbjct: 103 HLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER----- 157

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
                                          V   V ++ I+I G C+ G + K ++   
Sbjct: 158 -------------------------------VKFDVYSFGIMIKGCCENGNLDKSFQLLG 186

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + +DM   G+ PN V + TLIDG CK+ +I  A   F++MG  G+ A   T+  LINGL 
Sbjct: 187 LLQDM---GLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF 243

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G   +   L ++M  +GL PN+ T N L+N +C +  + +A  LFD++ E+G+  +V+
Sbjct: 244 KKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYNTLI   C+E R+ +A  + + M    V P++ TYN LI G    GN++   +++++L
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            +NG+   LVTYNIL+    K G  K    L  E   ME     P+ VT  VLI  + + 
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE---MEGRGISPSKVTCTVLIDAYVRL 420

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ++E A  + + + + GL+P+   Y ++   +  KG
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKG 456



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 164/295 (55%), Gaps = 5/295 (1%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           + L  N    + LM  Y    K    F+ F    + G++++V++ N L+  + +E +  +
Sbjct: 261 NGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWE 320

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +  +MK+  +  NL ++N ++ G C  G L+KAS +++ +KS G+SP +VTYNILI+
Sbjct: 321 AEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIE 380

Query: 230 GYCKKGGIGKMYKADA-VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           GY K G     +K  A + ++M   GI P++VT   LID + + + +  A +++  M   
Sbjct: 381 GYSKAGN----WKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKF 436

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V  Y  LI+GLC+ G + E+  L   M    ++P+ V  N +I+G+CK+    +A
Sbjct: 437 GLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRA 496

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             L  ++  +GL P+V +Y+++I   CK+G+ E+A  + + M++  + P  S  N
Sbjct: 497 LRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 165/309 (53%), Gaps = 3/309 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           GF+ F++    GL  ++ + N L+     EGK      ++ EM+ R +E N+ ++N ++ 
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G+C+  ++ +A  +++ MK   VSP ++TYN LI G+C    +G + KA ++   +  NG
Sbjct: 311 GMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCD---VGNLDKASSLLDQLKSNG 367

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+N LI+G+ K  N      +  EM   GI+   VT   LI+      ++++A 
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M   GL P+V     LI+G C K  ++++  LF  + E  + PS + YNT+I  Y
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKE     A  +   M  +G++P+V++Y+ +I  L ++G  E    ++++++   ++   
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSA 547

Query: 435 VTYNILVGA 443
              N++  A
Sbjct: 548 SILNMISKA 556



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 18/282 (6%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A ++F   ++ G      + + L+        +  A  +  ++ S+ I++   T  SL+
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + L  +       AL  E              ++IN   K +L++KA + F+++ ++GL 
Sbjct: 80  HHLTQNQNPSMTTALLYE--------------SIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
                +N+L+ +  +    E A+   N + +R V  DV ++  +I G    GN++    +
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQL 184

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  L + G+   +V Y  L+   CK+G  ++A    D+M +M       N  T+ VLI G
Sbjct: 185 LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEM---GLVANQYTFTVLING 241

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             +KG  +D   L  ++   GL PN  TY  +  E   +G I
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI 283



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)

Query: 358 QGLSPSVIT---YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           Q  +PS+ T   Y ++I+A+ K   ++ A    N M+D+G++   + +N L+  L R   
Sbjct: 84  QNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNC 143

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            E      NEL    ++  + ++ I++   C++G   K+  LL  +  M      PN+V 
Sbjct: 144 FEKAWLFFNEL-KERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLS---PNVVI 199

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           Y  LI G C+ G +E A    +++ E GL+ NQ T+ ++   + +KG   D
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 12/459 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L   +V  K  P + SF   L   V    ++SV ++F  +      +  +  I+ +++ +
Sbjct: 59  LFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPV--HEFILSIVVNS 116

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-EL 184
                +  LGF         G+  + +  N LLR L  E K +D  +++K++ R  I E 
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEP 176

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   +  V+NGLCK G   KA D++  M+     P    Y+I+ID +CK G +     A 
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD---GAT 233

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++  +M +  I P+  T++TLID  CK         +F EM    I   V T+NS+I+GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +GK+++A  +   M+  G+ P+V+T N +I+G+  +  V++AR +FD +  + + P++
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I+YN LI+ Y ++ ++++A  +   +  +G+ P + T N L+ GL   G  +  +N  +E
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +++ G    L T+  L+G   K+G  ++A+S      K+E+ ++  NI  Y  +I G C+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMS---HFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            GKL+ A+    +L   GL P+  TY  +     ++G +
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 202/400 (50%), Gaps = 7/400 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F++        SV+S ++LL+ALV    +  V  +++E+ + RI ++    + V+N
Sbjct: 56  AFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-EN 253
             C   + +    ++      G+    V +N L+ G   +    K+  A  +FK +V EN
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAEN---KVKDAVHLFKKLVREN 172

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
              PNEV + T+++G CK  +   A  +   M           Y+ +I+  C DG LD A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +L +EM    + P++ T + LI+  CK    E  R LF ++    + P+V T+N++ID 
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CKEG++EDA  +   M+++GV PDV TYN +I G    G V+  R I + ++N  +   
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +++YNIL+    +  K  +A+ +  E   + ++   P+IVT NVL+ G  + G+ + A  
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCRE---ISQKGLKPSIVTCNVLLHGLFELGRTKSAQN 409

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
             +E+L  G IP+  T+  +     + G + +   H + +
Sbjct: 410 FFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ A  K+G  +    +  EMK++ I  ++ +++ +++ LCK  +      +  +M  L 
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P V T+N +IDG CK+   GK+  A+ + + M+E G+ P+ +T+N +IDG+     + 
Sbjct: 279 IYPNVCTFNSVIDGLCKE---GKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVD 335

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++F+ M +  I   +++YN LING     K+DEA+ +  E+   GLKP++VT N L+
Sbjct: 336 RAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G  +    + A+  FD++   G  P + T+ TL+  Y K G +E+A +  + +  R   
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++  Y  +I GL + G ++       +L   G+   ++TY  ++   C++G   +A  +
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L    KME      +  TYNV+++GF +  K+ +    L E+  K       T +++ + 
Sbjct: 516 LR---KMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572

Query: 517 MME 519
           + E
Sbjct: 573 IAE 575



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 177/370 (47%), Gaps = 42/370 (11%)

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           C  SI+ID    A+ K+                 +   + + + L+ AL K  ++E+V  
Sbjct: 214 CIYSIVID----AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           ++ EM    I  N+ +FN V++GLCK GK+  A +IM  M   GV P V+TYN++IDGY 
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY- 328

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
             G  G++ +A  +F  M+   I PN +++N LI+G+ + + I  AM+V  E+   G+  
Sbjct: 329 --GLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS-------------------- 332
            +VT N L++GL   G+   A    DEM+++G  P++ T                     
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446

Query: 333 ---------------NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
                           A+I+G CK   ++KA   F+ +   GL P VITY  +I  YC+E
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +++A  M   M D G L D  TYN ++ G  R   V  ++  + E+          T 
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATV 566

Query: 438 NILVGALCKD 447
            +L+  + +D
Sbjct: 567 ELLMDIIAED 576



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 38/240 (15%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S  + S+  N I  ++L+  Y +  K     +  +     GLK S+++CN LL  L + G
Sbjct: 343 SMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELG 402

Query: 166 KFEDVEYVYKEM-----------------------------------KRRRIELNLDSFN 190
           + +  +  + EM                                   +RRR + N+  + 
Sbjct: 403 RTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            V++GLCK GKL+KA    E +  +G+ P V+TY  +I GYC++G +    +A  + + M
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD---EAKDMLRKM 519

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
            +NG L +  T+N ++ GF +   +S      EE+     +    T   L++ +  D  L
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A +L  +M+ +   P+VV+ + L+      K       LF +I +  +       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN-N 428
           ++++ C   R +  F++      +G+  +   +N L+ GL  E  V+   ++  +LV  N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
                 V Y  ++  LCK G ++KA  LL     ME+    PN   Y+++I  FC+ G L
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLR---LMEQGSTKPNTCIYSIVIDAFCKDGML 229

Query: 489 EDANGLLNELLEKGLIPNQTTY 510
           + A  LLNE+ +K + P+  TY
Sbjct: 230 DGATSLLNEMKQKSIPPDIFTY 251


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 209/403 (51%), Gaps = 35/403 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ + ++    KEG       ++KEM +R I  +  +++ V++ LCKA  ++KA   + 
Sbjct: 219 VVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLR 278

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + GV P   TYN LI GY      G+  +A  VFK+M  + ILP+ VT + L+   C
Sbjct: 279 QMVNKGVLPNNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 335

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A  VF+ M   G    V +Y  ++NG    G L +   L D M+  G+ P++ 
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D+GV PD   Y+CLI G    G++   + +++E++NNGM   +V ++ ++  LCK G+ 
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 451 KKAVSLLDEMF----------------------KMEKEKKW----------PNIVTYNVL 478
             A ++ D                         KMEK  +           PN V Y  L
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + G+C+ G++++   L  E+L+KG+ P+   Y I+ + + E G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 234/476 (49%), Gaps = 23/476 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNG----KFTSVSTIFHALSTCS--------DSLCRNS 116
           ++H+L  A+   K  +FL   V  G     +T  + I+   ST            + R+S
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 117 IIID-----MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           I+ D     MLM +  K  K     + F      G   +V S   +L     +G   D+ 
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT 379

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++  M    I  ++ +FN ++      G L+KA  I  +M+  GV P VVTY  +I   
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   IGKM  A   F  M++ G+ P++  ++ LI GFC   ++  A ++  E+ ++G+ 
Sbjct: 440 CR---IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +V ++S+IN LC  G++ +A  + D  +  GL P  V  + L++G+C    +EKA  +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD +   G+ P+ + Y TL++ YCK GR+++  ++   ML +G+ P    YN +I GL  
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G     +   +E+  +G+     TYNI++  L K+    +A+ L  E+  M  +    N
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI---N 673

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I+T N +I G  Q  ++E+A  L   +   GL+P   TY I+   ++++G + + E
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 205/388 (52%), Gaps = 14/388 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +N+
Sbjct: 87  PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 146

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 203

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  P+ V ++T+IDGF K+ +++ A  +F+EM   GI    VTY+S+++ 
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +D+A A   +M+  G+ PN  T N LI G+      ++A  +F ++    + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+T + L+ + CK G++++A  + ++M  +G  P+V +Y  ++ G + +G +  + ++ +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+   + T+N+L+ A    G   KA+ + +E   M      P++VTY  +I   C
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE---MRDHGVKPDVVTYRTVIAALC 440

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + GK++DA    N+++++G+ P++  Y 
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYH 468



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D+G+K  V++   ++ AL + GK +D    + +M  + +  +  +++ ++ G C 
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L KA +++ ++ + G+   +V ++ +I+  CK   +G++  A  +F   V  G+ P 
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPT 533

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V ++ L+DG+C    +  A++VF+ M S GI    V Y +L+NG C  G++DE ++L  
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+KP+ +  N +I+G  +      A+V F +++E G++ +  TYN ++    K  
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNR 653

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             ++A  +   +    V  ++ T N +IAG+ +   VE  +++   +  +G+   +VTY+
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713

Query: 439 ILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           I++  L K+G  ++A    ++MF  M+     P+    N +++   +K ++  A   L++
Sbjct: 714 IMITNLIKEGLVEEA----EDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           + E+       T  ++ +    KG
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 38/367 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F +  D G+     + + L++     G     + +  E+    + L++  F+ ++N
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK G++  A +I +   ++G+ P  V Y++L+DGYC    +GKM KA  VF  MV  G
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL---VGKMEKALRVFDAMVSAG 564

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK----- 309
           I PN+V + TL++G+CK   I   + +F EM   GI    + YN +I+GL   G+     
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 310 ------------------------------LDEAVALRDEMMASGLKPNVVTSNALINGF 339
                                          DEA+ L  E+ A  +K N++T N +I G 
Sbjct: 625 VKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            + + VE+A+ LF  IS  GL P V+TY+ +I    KEG +E+A  M +SM + G  PD 
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
              N ++  L ++  +      ++++         +T  +LV      G  ++ +  L  
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804

Query: 460 MFKMEKE 466
            +    E
Sbjct: 805 KYHFLAE 811



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 8/158 (5%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGV 418
           LSP+  TY  L+D   +  R E A A    +L  G+  ++   N L+ G        E +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTY 475
             +++     G    + +Y+IL+ +LC  GKS +A    D++ +M  E      P++V Y
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA----DDLLRMMAEGGAVCSPDVVAY 222

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + +I GF ++G +  A  L  E++++G+ P+  TY  V
Sbjct: 223 STVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 231/457 (50%), Gaps = 60/457 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRR 180
           LM  +V+            R  + G  ++ ++ N L+    K G+ ED + Y+ +E+   
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             E +  ++N  +NGLC+   +  A  +M+ M   G  P V TYNI+++  CK G   ++
Sbjct: 282 -FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG---QL 337

Query: 241 YKADAVFKDMVENGILPNEVTFNTLI---------------------------------- 266
            +A  +   MV+ G LP+  TFNTLI                                  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 267 -DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +  CK  +   A+++FEEM + G     VTYN+LI+ LC  GKL +A+ L  +M ++G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + +T N +I+G CKK  +E+A  +FD +  QG+S + IT+NTLID  CK+ +++DAF 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+  G+ P+  TYN ++    ++G+++   +I+  +  NG    +VTY  L+  LC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+++ A+ +L  M +++  +  P    YN +++   ++  + DA  L  E+ E G  P
Sbjct: 578 KAGRTQVALKVLRGM-RIKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  TY+IV                   EM++KGFIP+
Sbjct: 635 DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 219/409 (53%), Gaps = 6/409 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++++ + L+   V+  K  L    +   G  G+K  V++ N L++AL +  +      + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R +  +  +F  ++ G  + G +  A  +   M  +G S   VT N+LI+GYCK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK- 263

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G++  A    +  + +G  P+++T+NT ++G C+++++  A+KV + M   G    V
Sbjct: 264 --LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN ++N LC +G+L+EA  + ++M+  G  P++ T N LI   C    +E+A  L   
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G+SP V T+N LI+A CK G    A  +   M + G  PD  TYN LI  L   G 
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    +++ ++ + G     +TYN ++  LCK  + ++A  + D+   M+ +    N +T
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ---MDLQGISRNAIT 498

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +N LI G C+  K++DA  L+N+++ +GL PN  TY  +     ++G I
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 215/387 (55%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V + N ++  L K G+ E+ + +  +M  R    ++ +FN ++  LC   +L +A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   +   GVSP V T+NILI+  CK   +G  + A  +F++M  +G  P+EVT+NTL
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCK---VGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C    +  A+ + ++M S G     +TYN++I+GLC   +++EA  + D+M   G+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +T N LI+G CK K ++ A  L + +  +GL P+ ITYN+++  YCK+G ++ A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G   DV TY  LI GL + G  +    ++  +   GMR     YN ++ +L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG-KLEDANGLLNELLEKGLI 504
           +    + A+SL  EM ++ +    P+ +TY ++ +G C+ G  +++A   + E+++KG I
Sbjct: 613 RRNNIRDALSLFREMAEVGEP---PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 505 PNQTTYQIVREEMMEKG----FIPDIE 527
           P  ++++++ E ++  G    FI  IE
Sbjct: 670 PEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +LN L +  K+     +  +M + G+ P VVT+N L+   C+     ++  A  + +
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH---QVRTAVLMLE 205

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G+ P+E TF TL+ GF ++ +I AA++V   M   G +A  VT N LING C  G
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++++A+    + +A G +P+ +T N  +NG C+   V  A  + D + ++G  P V TYN
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +++  CK G++E+A  + N M+DRG LPD++T+N LIA L     +E   ++  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + T+NIL+ ALCK G    A+ L +E   M+     P+ VTYN LI   C  GKL
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEE---MKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             A  LL ++   G   +  TY  + + + +K  I + E
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 31/364 (8%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           ++L A +    F     VY+E+ R+               L   G L+    ++ +M+  
Sbjct: 59  RMLNAALARDDFAPGPEVYEEIIRK---------------LGAVGALDLMKVLVAEMRRE 103

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN------GILPNEVTFNTLIDGF 269
           G   K+   +  +D Y      G+    DAV  D++ N      GI  + V +N L++  
Sbjct: 104 GHQVKLGVVHSFLDSY-----EGQQLFDDAV--DLILNQLQPLFGIQADTVVYNHLLNVL 156

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +   +     V+ EMG+ GI   VVT+N+L+  LC   ++  AV + +EM + G+ P+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   L+ GF ++  +E A  +   + E G S + +T N LI+ YCK GR+EDA      
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
            +  G  PD  TYN  + GL +  +V     +M+ +V  G    + TYNI+V  LCK+G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A  +L++M         P+I T+N LI   C   +LE+A  L  ++  KG+ P+  T
Sbjct: 337 LEEAKGILNQMV---DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 510 YQIV 513
           + I+
Sbjct: 394 FNIL 397



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 23/257 (8%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--GLKPNVVTSNALINGFCKKKLV 345
           H +  GVV  +S ++        D+AV L    +    G++ + V  N L+N   +   +
Sbjct: 105 HQVKLGVV--HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +    ++ ++  +G+ P V+T+NTL+ A C+  ++  A  M   M  RGV PD +T+  L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G   EG++E    +   ++  G  A  VT N+L+   CK G+ + A+  + +      
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------ 513
           E   P+ +TYN  + G CQ   +  A  +++ ++++G  P+  TY IV            
Sbjct: 283 E---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 514 ----REEMMEKGFIPDI 526
                 +M+++G +PDI
Sbjct: 340 AKGILNQMVDRGCLPDI 356



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 4/227 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R++I  + ++    K M+     E F +    G+  + ++ N L+  L K+ K +D   +
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ N  ++N +L   CK G + KA+DI+E M + G    VVTY  LI+G CK
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+   A  V + M   G+ P    +N ++    +  NI  A+ +F EM   G    
Sbjct: 579 A---GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +TY  +  GLC   G + EA     EM+  G  P   +   L  G 
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           + RN+I  + L+    K+ K    FE   +    GL+ + ++ N +L    K+G  +   
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + + M     E+++ ++  ++NGLCKAG+   A  ++  M+  G+ P    YN ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-ISAAMKVFEEMGSHGI 290
            ++  I     A ++F++M E G  P+ +T+  +  G C+    I  A     EM   G 
Sbjct: 612 FRRNNI---RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668

Query: 291 AAGVVTYNSLINGL 304
                ++  L  GL
Sbjct: 669 IPEFSSFRMLAEGL 682



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR--GVLPDVSTYNCLI 406
           +VL  ++  +G    +   ++ +D+Y  +   +DA  +  + L    G+  D   YN L+
Sbjct: 94  KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 153

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L     ++ + ++ +E+   G++  +VT+N L+ ALC+  + + AV +L+EM      
Sbjct: 154 NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM---SSR 210

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+  T+  L++GF ++G +E A  +   +LE G    + T  ++     + G + D 
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 527 EGHM 530
            G++
Sbjct: 271 LGYI 274


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 209/389 (53%), Gaps = 24/389 (6%)

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           CN   R L   GKFE    V +EM  +    +  +++ V+  LC A K+ KA  + ++MK
Sbjct: 91  CN-FTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMK 149

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G++P V TY  L+D +CK   +G + +A   F +M ++G  PN VT+  LI  + K  
Sbjct: 150 RNGITPDVYTYTTLLDRFCK---VGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM------------- 320
            +S A ++FE M S+G    +VTY +LI+G C  G+ ++A  +   M             
Sbjct: 207 KLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIY 266

Query: 321 ---MASGLK-PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              + S LK PNVVT  AL++G CK   V++AR L + +S +G  P+ I Y+ LID +CK
Sbjct: 267 FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCK 326

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G++++A  +   ML  G  P+V TY+ LI  L ++  ++    ++ +++ N     +V 
Sbjct: 327 VGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVI 386

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  +V  LCK GK+ +A  L   M  ME++  +PN+VTY  +I GF + G+++    LL 
Sbjct: 387 YTEMVDGLCKVGKTDEAYRL---MLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +  KG  PN  TY+++       G + D
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDD 472



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 197/402 (49%), Gaps = 21/402 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ F+     G+   V +   LL    K G  E     + EM++     N+ ++  +++
Sbjct: 141 AFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIH 200

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK----DM 250
              K  KL++A++I E M S G  P +VTY  LIDG+CK G   K  +  A  K    D+
Sbjct: 201 AYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDI 260

Query: 251 VENGIL----------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +  I           PN VT+  L+DG CK   +  A  + E M   G     + Y++L
Sbjct: 261 PDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDAL 320

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C  GKLDEA  +  +M+  G  PNV T ++LI+   K K ++ A  +   + E   
Sbjct: 321 IDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSC 380

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P+V+ Y  ++D  CK G+ ++A+ +   M ++G  P+V TY  +I G  + G V+    
Sbjct: 381 APNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE 440

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLI 479
           ++  + + G     +TY +L+   C  G    A  LL+EM    K+  WP +I  Y  +I
Sbjct: 441 LLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM----KQTYWPKHIGMYRKVI 496

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +GF    +   + GLL EL E G +P    Y+++ +  ++ G
Sbjct: 497 EGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG 536



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 166/342 (48%), Gaps = 23/342 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---ADA 245
           FN +++  C++G    A  +++ M   G  P  V YNILI G C    +  M     A+ 
Sbjct: 14  FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAER 73

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
            + +M+E G++ N+V         C       A  V  EM S G      TY+ +I  LC
Sbjct: 74  AYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLC 133

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              K+++A  L  EM  +G+ P+V T   L++ FCK  L+E+AR  FD++ + G +P+V+
Sbjct: 134 NASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVV 193

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY  LI AY K  ++  A  +   ML  G +P++ TY  LI G  + G  E    I   +
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 426 VNNGM-----------------RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            N+ +                    +VTY  LV  LCK  K K+A  LL+    M  E  
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE---TMSLEGC 310

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN + Y+ LI GFC+ GKL++A  +  ++L  G  PN  TY
Sbjct: 311 EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 152/319 (47%), Gaps = 23/319 (7%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M + G  P  + +N L+  YC+ G     YK   + K MV  G  P  V +N LI G C 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYK---LLKKMVICGYQPGYVVYNILIGGICS 58

Query: 272 DENISA------AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            E++ +      A + + EM   G+    V   +    LC  GK ++A  +  EMM+ G 
Sbjct: 59  TEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGF 118

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T + +I   C    VEKA  LF ++   G++P V TY TL+D +CK G +E A  
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARN 178

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M   G  P+V TY  LI    +   +     I   +++NG    +VTY  L+   C
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 446 KDGKSKKAVSLLDEM-------------FKM-EKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           K G+++KA  +   M             F++ + E K PN+VTY  L+ G C+  K+++A
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 492 NGLLNELLEKGLIPNQTTY 510
             LL  +  +G  PNQ  Y
Sbjct: 299 RDLLETMSLEGCEPNQIIY 317



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 6/302 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N II D L+  + K  K     E F +   +G   +V + + L+  L K+ + +    V 
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M  M+  G  P VVTY  +IDG+   
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF--- 429

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  G++ +   + + M   G  PN +T+  LI+  C    +  A K+ EEM        +
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHI 489

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y  +I G     +   ++ L  E+   G  P +     LI+ F K   +E A  L ++
Sbjct: 490 GMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEE 547

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S    +    TY +LI++     +++ AF + + M  RG +P++S   CLI GL R G 
Sbjct: 548 LSSFSAAYQN-TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGK 606

Query: 415 VE 416
            E
Sbjct: 607 WE 608



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 37/301 (12%)

Query: 89  FVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           F K GK      +F  +    CS ++   S +ID L     K+ +  L  +   +  +  
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF----KDKRLDLALKVLTKMLENS 379

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
              +V+   +++  L K GK ++   +   M+ +    N+ ++  +++G  KAG++++  
Sbjct: 380 CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCL 439

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------------------------ 242
           ++++ M S G +P  +TY +LI+  C  G +   +K                        
Sbjct: 440 ELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF 499

Query: 243 ------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                 +  +  ++ E+G +P    +  LID F K   +  A+++ EE+ S   AA   T
Sbjct: 500 SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNT 558

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y SLI  L +  K+D+A  L  +M   G  P +     LI G  +    E+A  L D I 
Sbjct: 559 YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSIC 618

Query: 357 E 357
           +
Sbjct: 619 Q 619


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 220/413 (53%), Gaps = 45/413 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N L+  L  EG+  +   +  +M  + + +++ ++  ++NG+CK G    A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--VFKDMVENGILPNEVTFN 263
            +++  M+   + P VV Y+ +ID  CK G     + +DA  +F +M+E GI PN  T+N
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDG-----HHSDAQYLFSEMLEKGIAPNVFTYN 119

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +IDGFC     S A ++  +M    I   V+T+N+LI+    +GKL EA  L DEM+  
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + P+ VT N++I GFCK    + A+ +FD ++    SP V+T+NT+ID YC+  R+++ 
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 235

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +  RG++ + +TYN LI G     N+   +++  E++++G+    +T NIL+  
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 444 LCKDGKSKKAVSLLDEMFKMEK---------------------EKKW------------P 470
            C++ K ++A+ L  E+ +M K                     ++ W            P
Sbjct: 296 FCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 354

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++ TYNV+I GFC K  + DAN L +++ + G  P+ +TY  +    ++ G I
Sbjct: 355 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 407



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V+  + ++  L K+G   D +Y++ EM  + I  N+ ++N +++G C  G+ + A 
Sbjct: 76  IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 135

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM    ++P V+T+N LI    K+G   K+++A+ +  +M+   I P+ VT+N++I
Sbjct: 136 RLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMI 192

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFCK      A  +F+ M S      VVT+N++I+  C   ++DE + L  E+   GL 
Sbjct: 193 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 248

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N  T N LI+GFC+   +  A+ LF ++   G+ P  IT N L+  +C+  ++E+A  +
Sbjct: 249 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 308

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +    +  D   YN +I G+ +   V+   ++   L  +G+   + TYN+++   C 
Sbjct: 309 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC- 367

Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               K A+S  + +F KM+     P+  TYN LI+G  + G+++ +  L++E+   G   
Sbjct: 368 ---GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 424

Query: 506 NQTTYQIVRE 515
           +  T ++V +
Sbjct: 425 DAFTIKMVAD 434



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 176/331 (53%), Gaps = 18/331 (5%)

Query: 135 GFEAFKRAGDYG----------LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           GF +F R  D            +   VL+ N L+ A VKEGK  + E +  EM  R I  
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N ++ G CK  + + A    + M  L  SP VVT+N +ID YC+   + +  +  
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ-- 237

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + +++   G++ N  T+NTLI GFC+ +N++AA  +F+EM SHG+    +T N L+ G 
Sbjct: 238 -LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + KL+EA+ L + +  S +  + V  N +I+G CK   V++A  LF  +   G+ P V
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TYN +I  +C +  + DA  + + M D G  PD STYN LI G  + G ++    +++E
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           + +NG      T   +V  L  DG+  K+ S
Sbjct: 417 MRSNGFSGDAFTIK-MVADLITDGRLDKSFS 446



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 165/302 (54%), Gaps = 10/302 (3%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M  +G++P V+T+N LI+G C +   G++ +A A+   MV  G+  + VT+ T+++G CK
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLE---GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             +  +A+ +  +M    I   VV Y+++I+ LC DG   +A  L  EM+  G+ PNV T
Sbjct: 58  MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+GFC       A+ L  D+ E+ ++P V+T+N LI A  KEG++ +A  + + ML
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            R + PD  TYN +I G  +    +  +++ + + +      +VT+N ++   C+  +  
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 233

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + + LL E   + +     N  TYN LI GFC+   L  A  L  E++  G+ P+  T  
Sbjct: 234 EGMQLLRE---ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 290

Query: 512 IV 513
           I+
Sbjct: 291 IL 292



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 157/292 (53%), Gaps = 23/292 (7%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MVE G+ P  +TFNTLI+G C +  +  A  +  +M   G+   VVTY +++NG+C  G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
              A+ L  +M  + +KP+VV  +A+I+  CK      A+ LF ++ E+G++P+V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID +C  GR  DA  +   M++R + PDV T+N LI+   +EG +     + +E+++  
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    VTYN ++   CK  +   A  + D M         P++VT+N +I  +C+  +++
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKRVD 233

Query: 490 DANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
           +   LL E+  +GL+ N TTY                Q + +EM+  G  PD
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 285



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 22/137 (16%)

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++ G+ P V T+N LI GL  EG V     ++N++V  G+   +VTY  +V  +CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +K A++LL    KME+    P++V Y+ +I   C+ G   DA                  
Sbjct: 61  TKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDA------------------ 99

Query: 510 YQIVREEMMEKGFIPDI 526
            Q +  EM+EKG  P++
Sbjct: 100 -QYLFSEMLEKGIAPNV 115



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+ F +N K      +F  +      L  +++  ++++    K  K    ++ F     
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 349

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G++  V + N ++     +    D   ++ +MK    E +  ++N ++ G  KAG+++K
Sbjct: 350 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 409

Query: 205 ASDIMEDMKSLGVSPKVVTYNILID 229
           + +++ +M+S G S    T  ++ D
Sbjct: 410 SIELISEMRSNGFSGDAFTIKMVAD 434


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 231/457 (50%), Gaps = 60/457 (13%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRR 180
           LM  +V+            R  + G  ++ ++ N L+    K G+ ED + Y+ +E+   
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             E +  ++N  +NGLC+   +  A  +M+ M   G  P V TYNI+++  CK G   ++
Sbjct: 282 -FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG---QL 337

Query: 241 YKADAVFKDMVENGILPNEVTFNTLI---------------------------------- 266
            +A  +   MV+ G LP+  TFNTLI                                  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 267 -DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            +  CK  +   A+++FEEM + G     VTYN+LI+ LC  GKL +A+ L  +M ++G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             + +T N +I+G CKK  +E+A  +FD +  QG+S + IT+NTLID  CK+ +++DAF 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M+  G+ P+  TYN ++    ++G+++   +I+  +  NG    +VTY  L+  LC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+++ A+ +L  M +++  +  P    YN +++   ++  + DA  L  E+ E G  P
Sbjct: 578 KAGRTQVALKVLRGM-RIKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634

Query: 506 NQTTYQIVRE-----------------EMMEKGFIPD 525
           +  TY+IV                   EM++KGFIP+
Sbjct: 635 DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 219/409 (53%), Gaps = 6/409 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++++ + L+   V+  K  L    +   G  G+K  V++ N L++AL +  +      + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM  R +  +  +F  ++ G  + G +  A  +   M  +G S   VT N+LI+GYCK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK- 263

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G++  A    +  + +G  P+++T+NT ++G C+++++  A+KV + M   G    V
Sbjct: 264 --LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN ++N LC +G+L+EA  + ++M+  G  P++ T N LI   C    +E+A  L   
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G+SP V T+N LI+A CK G    A  +   M + G  PD  TYN LI  L   G 
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +    +++ ++ + G     +TYN ++  LCK  + ++A  + D+   M+ +    N +T
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ---MDLQGISRNAIT 498

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +N LI G C+  K++DA  L+N+++ +GL PN  TY  +     ++G I
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 215/387 (55%), Gaps = 11/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V + N ++  L K G+ E+ + +  +M  R    ++ +FN ++  LC   +L +A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   +   GVSP V T+NILI+  CK   +G  + A  +F++M  +G  P+EVT+NTL
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCK---VGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  C    +  A+ + ++M S G     +TYN++I+GLC   +++EA  + D+M   G+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +T N LI+G CK K ++ A  L + +  +GL P+ ITYN+++  YCK+G ++ A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G   DV TY  LI GL + G  +    ++  +   GMR     YN ++ +L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG-KLEDANGLLNELLEKGLI 504
           +    + A+SL  EM ++ +    P+ +TY ++ +G C+ G  +++A   + E+++KG I
Sbjct: 613 RRNNIRDALSLFREMAEVGEP---PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 505 PNQTTYQIVREEMMEKG----FIPDIE 527
           P  ++++++ E ++  G    FI  IE
Sbjct: 670 PEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 6/339 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N +LN L +  K+     +  +M + G+ P VVT+N L+   C+     ++  A  + +
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH---QVRTAVIMLE 205

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G+ P+E TF TL+ GF ++ +I AA++V   M   G +A  VT N LING C  G
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++++A+    + +A G +P+ +T N  +NG C+   V  A  + D + ++G  P V TYN
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +++  CK G++E+A  + N M+DRG LPD++T+N LIA L     +E   ++  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + T+NIL+ ALCK G    A+ L +E   M+     P+ VTYN LI   C  GKL
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEE---MKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             A  LL ++   G   +  TY  + + + +K  I + E
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 31/364 (8%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           ++L A +    F     VY+E+ R+               L   G L+    ++ +M+  
Sbjct: 59  RMLNAALARDDFAPGPEVYEEIIRK---------------LGAVGALDLMKVLVAEMRRE 103

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN------GILPNEVTFNTLIDGF 269
           G   K+   +  +D Y      G+    DAV  D++ N      GI  + V +N L++  
Sbjct: 104 GHQVKLGVVHSFLDSY-----EGQQLFDDAV--DLILNQLQPLFGIQADTVVYNHLLNVL 156

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +   +     V+ EMG+ GI   VVT+N+L+  LC   ++  AV + +EM + G+ P+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDE 216

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T   L+ GF ++  +E A  +   + E G S + +T N LI+ YCK GR+EDA      
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
            +  G  PD  TYN  + GL +  +V     +M+ +V  G    + TYNI+V  LCK+G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A  +L++M         P+I T+N LI   C   +LE+A  L  ++  KG+ P+  T
Sbjct: 337 LEEAKGILNQMV---DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 510 YQIV 513
           + I+
Sbjct: 394 FNIL 397



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 23/257 (8%)

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--GLKPNVVTSNALINGFCKKKLV 345
           H +  GVV  +S ++        D+AV L    +    G++ + V  N L+N   +   +
Sbjct: 105 HQVKLGVV--HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +    ++ ++  +G+ P V+T+NTL+ A C+  ++  A  M   M  RGV PD +T+  L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G   EG++E    +   ++  G  A  VT N+L+   CK G+ + A+  + +      
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------ 513
           E   P+ +TYN  + G CQ   +  A  +++ ++++G  P+  TY IV            
Sbjct: 283 E---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 514 ----REEMMEKGFIPDI 526
                 +M+++G +PDI
Sbjct: 340 AKGILNQMVDRGCLPDI 356



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 4/227 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R++I  + ++    K M+     E F +    G+  + ++ N L+  L K+ K +D   +
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             +M    ++ N  ++N +L   CK G + KA+DI+E M + G    VVTY  LI+G CK
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               G+   A  V + M   G+ P    +N ++    +  NI  A+ +F EM   G    
Sbjct: 579 A---GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635

Query: 294 VVTYNSLINGLCV-DGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +TY  +  GLC   G + EA     EM+  G  P   +   L  G 
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           + RN+I  + L+    K+ K    FE   +    GL+ + ++ N +L    K+G  +   
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            + + M     E+++ ++  ++NGLCKAG+   A  ++  M+  G+ P    YN ++   
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-ISAAMKVFEEMGSHGI 290
            ++  I     A ++F++M E G  P+ +T+  +  G C+    I  A     EM   G 
Sbjct: 612 FRRNNI---RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668

Query: 291 AAGVVTYNSLINGL 304
                ++  L  GL
Sbjct: 669 IPEFSSFRMLAEGL 682



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR--GVLPDVSTYNCLI 406
           +VL  ++  +G    +   ++ +D+Y  +   +DA  +  + L    G+  D   YN L+
Sbjct: 94  KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 153

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L     ++ + ++ +E+   G++  +VT+N L+ ALC+  + + AV +L+EM      
Sbjct: 154 NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM---SSR 210

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+  T+  L++GF ++G +E A  +   +LE G    + T  ++     + G + D 
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 527 EGHM 530
            G++
Sbjct: 271 LGYI 274


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 228/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+  Y+++       E ++   +  L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A K+F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  + L P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLQPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+   ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+   L P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 21  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 61

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI  Y + G + DA        +  +     T   ++  L +  
Sbjct: 62  LETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLK 121

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 175

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLF 235

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ K  +P+       I+GH  N
Sbjct: 236 DEMLVKALVPNGVTFTTLIDGHCKN 260


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 203/382 (53%), Gaps = 6/382 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ + L+  L + G FE V  V+ +M       ++  +  +++G+CK  +L  A
Sbjct: 247 GCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVA 306

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I+  M S G+SP VV YN L+ G C      +  +A+ +  +M +     ++VTFN L
Sbjct: 307 RGILNRMPSYGLSPNVVCYNTLLKGLCSAD---RWEEAEGLLAEMFDKDCPLDDVTFNIL 363

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  C++  +   ++V E+M  HG    V+TY ++ING C +G +DEAV L   M A G 
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN V+   ++ G C  +    A  L   + +QG  P+ +T+NTLI+  CK+G +E A  
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML  G  PD+ +Y+ +I GL + GN +    ++N +V  GM    + Y+ +  AL 
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            +G+  K + + +    ++      + V YN +I   C++G+ + A   L  ++  G +P
Sbjct: 544 GEGRINKVIQMFE---NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600

Query: 506 NQTTYQIVREEMMEKGFIPDIE 527
           N++TY I+   +  +GF+ + +
Sbjct: 601 NESTYTILIRGLASEGFVKEAQ 622



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 214/419 (51%), Gaps = 20/419 (4%)

Query: 133 HLGFEAFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-K 178
           H+  EA  RA  +             G    V +CN +L+A+  +G  ++   + +++  
Sbjct: 150 HVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLP 209

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
               E ++ S+N VL GLC A +     D+ME+M + G  P +VT++ LI   C+ G   
Sbjct: 210 SFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFE 269

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++++   V   M E+G  P+   + T+IDG CK+E +  A  +   M S+G++  VV YN
Sbjct: 270 RVHE---VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYN 326

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L+ GLC   + +EA  L  EM       + VT N L++  C+  LV++   + + + E 
Sbjct: 327 TLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEH 386

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL         
Sbjct: 387 GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDA 446

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +M++++  G     VT+N L+  LCK G  ++A+ LL +M         P++++Y+ +
Sbjct: 447 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV---NGCSPDLISYSTV 503

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           I G  + G  ++A  LLN +++KG+ PN   Y  +   +  +G I  +     NI  T+
Sbjct: 504 IDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTT 562



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 184/368 (50%), Gaps = 7/368 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+RAL   G+  D   V  +M RR        ++  L   C+A     A  ++ D+   G
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENI 275
            +  V   N+++   C +G + +  +   + +D++ + G  P+ V++N ++ G C     
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVR---LLRDLLPSFGCEPDVVSYNAVLRGLCMARRW 233

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
                + EEM + G    +VT+++LI  LC +G  +    +  +M   G  P+V     +
Sbjct: 234 GHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G CK++ +E AR + + +   GLSP+V+ YNTL+   C   R E+A  +   M D+  
Sbjct: 294 IDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDC 353

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
             D  T+N L+  L + G V+ V  ++ +++ +G    ++TY  ++   CK+G   +AV 
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 413

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           LL  M         PN V+Y +++KG C   +  DA  L+++++++G  PN  T+  +  
Sbjct: 414 LLRSMAACGCR---PNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLIN 470

Query: 516 EMMEKGFI 523
            + +KG +
Sbjct: 471 FLCKKGLV 478



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 199/397 (50%), Gaps = 12/397 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L+  +V A   P I +F   +    +NG F  V  +   ++   C+  +   + IID   
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID--- 295

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K  +  +      R   YGL  +V+  N LL+ L    ++E+ E +  EM  +   
Sbjct: 296 -GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP 354

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++ LC+ G +++  +++E M   G  P V+TY  +I+G+CK+G I +   A
Sbjct: 355 LDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDE---A 411

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + + M   G  PN V++  ++ G C  E    A ++  +M   G     VT+N+LIN 
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINF 471

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G +++A+ L  +M+ +G  P++++ + +I+G  K    ++A  L + + ++G+SP+
Sbjct: 472 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y+++  A   EGR+     M  ++ D  V  D   YN +I+ L + G  +     + 
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +V++G      TY IL+  L  +G  K+A  +L E+
Sbjct: 592 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 157/331 (47%), Gaps = 35/331 (10%)

Query: 224 YNILIDGYCKKG-----------------------------GIGKMYKADAVFKDMVENG 254
           YN ++ GYC+ G                               G++  A AV  DM   G
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P    ++  ++  C+      A+ V  ++   G A  V   N ++  +C  G +DEAV
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 315 A-LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             LRD + + G +P+VV+ NA++ G C  +     + L +++   G  P+++T++TLI  
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ G  E    +   M + G  PDV  Y  +I G+ +E  +E  R I+N + + G+   
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDAN 492
           +V YN L+  LC   + ++A  LL EMF    +K  P + VT+N+L+   CQ G ++   
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMF----DKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            +L ++LE G +P+  TY  V     ++G I
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 52/323 (16%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N ++ G+C+   ++AA ++     S  +A    TY  L+  LC  G++ +A+A+ D+M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAA---SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  P     +  +   C+      A  +  D+  +G +  V   N ++ A C +G ++
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 382 DAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +A  +   +L   G  PDV +YN ++ GL        V+++M E+V  G    +VT++ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 441 VGALCKDGKSKKA-------------------VSLLDEMFKMEKEKKW------------ 469
           +G LC++G  ++                     +++D + K E+ +              
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 470 -PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---------------- 512
            PN+V YN L+KG C   + E+A GLL E+ +K    +  T+ I                
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 513 VREEMMEKGFIPDIEGHMYNISG 535
           V E+M+E G +PD+  +   I+G
Sbjct: 379 VLEQMLEHGCMPDVITYTTVING 401


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 205/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G  +    +  +M++ ++E  +  +  +++GLCK   ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++M++ G+ P VVTY+ LI   C     G+   A  +  DM+E  I P+  TF+ L
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCN---YGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   +VTY+SLING C+  +LDEA  + + M++   
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VV+ + LI GFCK K V++   LF ++S++GL  + +TY TLI    + G  + A  
Sbjct: 393 FPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE 452

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV P++ TYN L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +      D    +  +   P++V YN +I GFC+KG  E+A+ L  E+ E G +P
Sbjct: 513 KAGKVEDG---WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 506 NQTTYQIVREEMMEKG 521
           N   Y  +    +  G
Sbjct: 570 NSGCYNTLIRARLRDG 585



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 206/376 (54%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + + ++ N L+  L    K  +   +   M  +  + +L ++  V+NGLCK G  + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M+   + P V+ Y  +IDG CK      M  A  +FK+M   GI PN VT+++L
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNK---HMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   V T+++LI+    +GKL EA  L DEM+   +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++VT ++LINGFC    +++A+ +F+ +  +   P V++Y+TLI  +CK  R+++   
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ +  TY  LI GL + G+ +  + I  E+V++G+   ++TYN L+  LC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK +KA+ + +    +++ K  P I TYN++I+G C+ GK+ED   L   L  KG+ P
Sbjct: 478 KNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534

Query: 506 NQTTYQIVREEMMEKG 521
           +   Y  +      KG
Sbjct: 535 DVVAYNTMISGFCRKG 550



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 204/373 (54%), Gaps = 8/373 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  KF+ V  + ++M+   +  N  +++ ++N  C+  +L  A  ++
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I    +A A+   M   G  PN VTFNTLI G 
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRIS---EAVALVDQMFVTGYQPNTVTFNTLIHGL 196

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + + M + G    +VTY  ++NGLC  G  D A  L ++M    L+P V
Sbjct: 197 FLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGV 256

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +    +I+G CK K ++ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + 
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++R + PDV T++ LI    +EG +     + +E+V   +   +VTY+ L+   C   +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +A     +MF+ M  +  +P++V+Y+ LIKGFC+  ++++   L  E+ ++GL+ N  
Sbjct: 377 LDEA----KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 509 TYQIVREEMMEKG 521
           TY  + + + + G
Sbjct: 433 TYTTLIQGLFQAG 445



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 193/355 (54%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D LC+N  + D L L              FK     G++ +V++ + L+  L   G
Sbjct: 260 TTIIDGLCKNKHMDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++ D   +  +M  R+I  ++ +F+ +++   K GKL +A  + ++M    + P +VTY+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI+G+C      ++ +A  +F+ MV     P+ V+++TLI GFCK + +   M++F EM
Sbjct: 366 SLINGFCMHD---RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    VTY +LI GL   G  D A  +  EM++ G+ PN++T N L++G CK   +
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA V+F+ +    + P++ TYN +I+  CK G++ED + +  ++  +GV PDV  YN +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I+G  R+G+ E    +  E+  +G       YN L+ A  +DG  + +  L+ EM
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 212/387 (54%), Gaps = 9/387 (2%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           V  + P   F  ++RA  +  K+S     +L R  + E K +D   ++ EM + R   ++
Sbjct: 25  VATVSPSFSF-FWRRA--FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSI 81

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
             F+ +L+ + K  K +    + E M++LG+     TY+ILI+ +C++    ++  A AV
Sbjct: 82  IEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRS---QLPLALAV 138

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
              M++ G  PN VT ++L++G+C  + IS A+ + ++M   G     VT+N+LI+GL +
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             K  EAVAL D M+A G +P++VT   ++NG CK+   + A +L + + +  L P V+ 
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y T+ID  CK   M+DA  +   M  +G+ P+V TY+ LI+ L   G       ++++++
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
              +   + T++ L+ A  K+GK  +A  L DEM K   +   P+IVTY+ LI GFC   
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHD 375

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L++A  +   ++ K   P+  +Y  +
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTL 402



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 238/474 (50%), Gaps = 17/474 (3%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSL 112
           EL+   ++ L G ++ S    + +P I  F   L    K  KF  V ++   +      +
Sbjct: 59  ELKLDDAVALFGEMVKS----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--M 112

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
             N     +L+  + +  +  L      +    G + ++++ + LL       +  +   
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           +  +M     + N  +FN +++GL    K ++A  +++ M + G  P +VTY ++++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 233 KKGGIGKMYKADAVFKDMVENGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           K+G     +    +  + +E G L P  + + T+IDG CK++++  A+ +F+EM + GI 
Sbjct: 233 KRGDTDLAF----ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             VVTY+SLI+ LC  G+  +A  L  +M+   + P+V T +ALI+ F K+  + +A  L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +D++ ++ + PS++TY++LI+ +C   R+++A  M   M+ +   PDV +Y+ LI G  +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
              V+    +  E+   G+    VTY  L+  L + G    A  +  EM     +   PN
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS---DGVPPN 465

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           I+TYN L+ G C+ GKLE A  +   L    + P   TY I+ E M + G + D
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 231/450 (51%), Gaps = 15/450 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LH-MFVKNGKFTSVSTIFHALST-CSDSLCRNSIIIDMLM 123
           L+  + V    P   +F   +H +F+ N    +V+ I   ++  C   L    ++++ L 
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL- 231

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     L F    +     L+  VL    ++  L K    +D   ++KEM+ + I 
Sbjct: 232 ---CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+ +++ +++ LC  G+ + AS ++ DM    ++P V T++ LID + K+G   K+ +A
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEA 345

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + ++ +MV+  I P+ VT+++LI+GFC  + +  A ++FE M S      VV+Y++LI G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            C   ++DE + L  EM   GL  N VT   LI G  +    + A+ +F ++   G+ P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           ++TYNTL+D  CK G++E A  +   +    + P + TYN +I G+ + G VE   ++  
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            L   G++  +V YN ++   C+ G  ++A +L  EM   +++   PN   YN LI+   
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM---KEDGTLPNSGCYNTLIRARL 582

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + G  E +  L+ E+   G   + +T  +V
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLV 612



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 181/308 (58%), Gaps = 6/308 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V + + L+ A VKEGK  + E +Y EM +R I+ ++ +++ ++NG C   +L++A  + E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M S    P VV+Y+ LI G+CK   + +  +   +F++M + G++ N VT+ TLI G  
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME---LFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +  +   A ++F+EM S G+   ++TYN+L++GLC +GKL++A+ + + +  S ++P + 
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N +I G CK   VE    LF ++S +G+ P V+ YNT+I  +C++G  E+A A+   M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            + G LP+   YN LI    R+G+ E    ++ E+ + G  AG  +   LV  +  DG+ 
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLHDGRL 621

Query: 451 KKAVSLLD 458
            K  S LD
Sbjct: 622 DK--SFLD 627



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 159/289 (55%), Gaps = 3/289 (1%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A A+F +MV++   P+ + F+ L+    K       + + E+M + G+     TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            LIN  C   +L  A+A+  +MM  G +PN+VT ++L+NG+C  K + +A  L D +   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+ +T+NTLI       +  +A A+ + M+ +G  PD+ TY  ++ GL + G+ +  
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++N++    +  G++ Y  ++  LCK+     A++L  EM   E +   PN+VTY+ L
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM---ETKGIRPNVVTYSSL 297

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           I   C  G+  DA+ LL++++E+ + P+  T+  + +  +++G + + E
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + L    KNGK      +F  L  S    ++   +I+I+       K  K   G++ F  
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE----GMCKAGKVEDGWDLFCN 526

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G+K  V++ N ++    ++G  E+ + ++KEMK      N   +N ++    + G 
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586

Query: 202 LNKASDIMEDMKSLGVSPKVVTY----NILIDGYCKK 234
              +++++++M+S G +    T     N+L DG   K
Sbjct: 587 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 198/362 (54%), Gaps = 8/362 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++S N ++  L KE + E    +  EM+    E N  ++  +++GLCK G++ +A  ++ 
Sbjct: 10  IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +MK  G+   VV Y+ LI G+C KG +    +  A+F +M+E GI PN V ++ LI+GFC
Sbjct: 70  EMKRKGLEVDVVVYSTLISGFCSKGCLD---RGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K      A  V   M   GI   V TY  +I GLC DG+  +A+ L D M   G +P+ V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LING CK+  +  A  +F+ + E+G    V++YNTLI   C  G++++A  + +S+
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 391 LDRG--VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           L+ G  V PDV T+N +I GL +EG ++    I + ++  G    L T +IL+G   K G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
              KA+ L   + K+      P+  TY+V+I GFC+   L  A GL + +   GL P   
Sbjct: 307 IIDKAMELWKRVHKL---GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363

Query: 509 TY 510
            Y
Sbjct: 364 DY 365



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 193/339 (56%), Gaps = 8/339 (2%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           MKR  I  ++ S+N ++NGLCK  +L KA D++ +M+     P   TY IL+DG CK+  
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKE-- 58

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            G++ +A  +  +M   G+  + V ++TLI GFC    +     +F+EM   GI+  VV 
Sbjct: 59  -GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y+ LING C  G   EA A+   M   G++P+V T   +I G CK     KA  LFD ++
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G  PS +TYN LI+  CKEG + DAF +  +ML++G   +V +YN LI GL   G ++
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237

Query: 417 GVRNIMNELVNNG--MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
               + + L+ +G  +   ++T+N ++  LCK+G+  KAV + D M    +   + N+ T
Sbjct: 238 EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI---ERGSFGNLFT 294

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ++LI  + + G ++ A  L   + + GL+P+ TTY ++
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVM 333



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 178/312 (57%), Gaps = 4/312 (1%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK + + P +V+YN +I+G CK+    ++ KA  +  +M  +   PN  T+  L+DG CK
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEK---RLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +  AM++  EM   G+   VV Y++LI+G C  G LD   AL DEM+  G+ PNVV 
Sbjct: 58  EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LINGFCKK L  +A  +   ++E+G+ P V TY  +I   CK+GR   A  + + M 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++G  P   TYN LI GL +EG +     I   ++  G R  +V+YN L+  LC +GK  
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ L   + + +     P+++T+N +I+G C++G+L+ A  + + ++E+G   N  T  
Sbjct: 238 EAMKLFSSLLE-DGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296

Query: 512 IVREEMMEKGFI 523
           I+  E ++ G I
Sbjct: 297 ILIGEYIKSGII 308



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 204/392 (52%), Gaps = 43/392 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L KEG+ E+   +  EMKR+ +E+++  ++ +++G C  G L++   + ++M   G
Sbjct: 51  LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP VV Y+ LI+G+CKK   G   +A AV   M E GI P+  T+  +I G CKD    
Sbjct: 111 ISPNVVVYSCLINGFCKK---GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRAR 167

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+ +F+ M   G     VTYN LINGLC +G + +A  + + M+  G +  VV+ N LI
Sbjct: 168 KALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227

Query: 337 NGFCKKKLVEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR- 393
            G C    +++A  LF  + E G  + P VIT+NT+I   CKEGR++ A  + ++M++R 
Sbjct: 228 MGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287

Query: 394 ----------------------------------GVLPDVSTYNCLIAGLSREGNVEGVR 419
                                             G++P  +TY+ +I G  +   +   +
Sbjct: 288 SFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAK 347

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + + +  +G+   L  YN L+ +LCK+   ++A  L  EM +   E   P+ +++N++I
Sbjct: 348 GLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCE---PDTISFNIMI 404

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            G  + G +  A  LLN++ + GL P+  TY 
Sbjct: 405 DGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 202/378 (53%), Gaps = 8/378 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G   F    + G+  +V+  + L+    K+G + +   V   M  R I+ ++ ++  ++ 
Sbjct: 99  GKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIG 158

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLCK G+  KA D+ + M   G  P  VTYN+LI+G CK+G IG  +K   +F+ M+E G
Sbjct: 159 GLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFK---IFETMLEKG 215

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG--IAAGVVTYNSLINGLCVDGKLDE 312
                V++NTLI G C +  +  AMK+F  +   G  +   V+T+N++I GLC +G+LD+
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           AV + D M+  G   N+ T + LI  + K  +++KA  L+  + + GL PS  TY+ +ID
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +CK   +  A  + + M   G+ P +  YN L+A L +E ++E  R +  E+  +    
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             +++NI++    K G    A  LL++M +M      P+  TY+  I    + G++E+A 
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQM---GLTPDAYTYSSFINRLSKLGQMEEAK 452

Query: 493 GLLNELLEKGLIPNQTTY 510
           G  + ++  G+ P+   Y
Sbjct: 453 GAFDSMIASGITPDNHVY 470



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 5/325 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR--RRIELNLDSFNFV 192
            F+ F+   + G +  V+S N L+  L   GK ++   ++  +      +E ++ +FN V
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           + GLCK G+L+KA +I + M   G    + T +ILI  Y K G I K   A  ++K + +
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK---AMELWKRVHK 320

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G++P+  T++ +IDGFCK   ++ A  +F  M   G++  +  YN+L+  LC +  L++
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQ 380

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  EM  S  +P+ ++ N +I+G  K   +  A+ L +D+ + GL+P   TY++ I+
Sbjct: 381 ARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFIN 440

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              K G+ME+A    +SM+  G+ PD   Y+ LI G      +E V N++ ++ + G+  
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVIL 500

Query: 433 GLVTYNILVGALCKDGKSKKAVSLL 457
            L   N ++  LC   +    + LL
Sbjct: 501 DLEITNSILTFLCNSAEHLHVMELL 525



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 139/284 (48%), Gaps = 3/284 (1%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           NGK      +F +L    + +  + I  + ++    K  +     E +    + G   ++
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            +C+ L+   +K G  +    ++K + +  +  +  +++ +++G CK   LN A  +   
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  G+SP +  YN L+   CK+     + +A  +F++M E+   P+ ++FN +IDG  K
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKE---SSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             +I +A ++  +M   G+     TY+S IN L   G+++EA    D M+ASG+ P+   
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
            ++LI GF     +E+   L   +++ G+   +   N+++   C
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 22/132 (16%)

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +LPD+ +YN +I GL +E  +E   +++ E+  +       TY IL+  LCK+G+ ++A+
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL EM   +++    ++V Y+ LI GFC KG L+    L +E                 
Sbjct: 66  RLLGEM---KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDE----------------- 105

Query: 515 EEMMEKGFIPDI 526
             M+EKG  P++
Sbjct: 106 --MLEKGISPNV 115


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 244/456 (53%), Gaps = 11/456 (2%)

Query: 73  LVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           ++  +  P I  F   L  F K   +++  ++ H L      +  + I +++L+  +   
Sbjct: 50  MLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL--KGIQPDLITLNILINCFCHM 107

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            +   GF    +    G     ++ N L++ L  +G+ +   + + ++  +  +LN  S+
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++NG+CK G    A  +++ +      P VV Y+ +ID  CK   + + Y    +F +
Sbjct: 168 GTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY---GLFSE 224

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI  + VT++TLI GFC +  +  A+ +  EM    I   V TYN L++ LC +GK
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA ++   M+ + +KP+V+T + L++G+     V+KA+ +F+ +S  G++P V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +CK   +++A  +   M  + ++P + TY+ LI GL + G +  V ++++E+ + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
             A ++TY+ L+  LCK+G   +A++L +   KM+ +   PN  T+ +L+ G C+ G+L+
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFN---KMKDQGIRPNTFTFTILLDGLCKGGRLK 461

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           DA  +  +LL KG   N  TY ++ +   ++G + +
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEE 497



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 208/383 (54%), Gaps = 8/383 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  +++ N L+      G+      V  ++ +R    +  + N ++ GLC  G++ KA
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + + G     V+Y  LI+G CK   IG    A  + + +      PN V ++T+
Sbjct: 149 LHFHDKLLAQGFQLNQVSYGTLINGVCK---IGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK + +S A  +F EM   GI+A VVTY++LI G C++GKL EA+ L +EM+   +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV T N L++  CK+  V++A+ +   + +  + P VITY+TL+D Y     ++ A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N+M   GV PDV TY  LI G  +   V+   N+  E+    M  G+VTY+ L+  LC
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G+      L+DEM     ++  P N++TY+ LI G C+ G L+ A  L N++ ++G+ 
Sbjct: 386 KSGRIPYVWDLIDEM----HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
           PN  T+ I+ + + + G + D +
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQ 464



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 207/377 (54%), Gaps = 19/377 (5%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           +G+ T  + + +  ST  D+LC+  ++ +               +  F      G+ + V
Sbjct: 191 DGRLTKPNVVMY--STIIDALCKYQLVSE--------------AYGLFSEMTVKGISADV 234

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ + L+     EGK ++   +  EM  + I  N+ ++N +++ LCK GK+ +A  ++  
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M    V P V+TY+ L+DGY     + ++ KA  VF  M   G+ P+  T+  LI+GFCK
Sbjct: 295 MLKACVKPDVITYSTLMDGYFL---VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           ++ +  A+ +F+EM    +  G+VTY+SLI+GLC  G++     L DEM   G   NV+T
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVIT 411

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            ++LI+G CK   +++A  LF+ + +QG+ P+  T+  L+D  CK GR++DA  +   +L
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 471

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G   +V TYN +I G  ++G +E    +++++ +NG     VT+ I++ AL K  ++ 
Sbjct: 472 TKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENG 531

Query: 452 KAVSLLDEMFKMEKEKK 468
             V    +++++ + KK
Sbjct: 532 GNVGFDKKVWEIVEHKK 548



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 192/346 (55%), Gaps = 10/346 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V+  + ++ AL K     +   ++ EM  + I  ++ +++ ++ G C  GKL +A  
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    ++P V TYNIL+D  CK+G   K+ +A +V   M++  + P+ +T++TL+D
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEG---KVKEAKSVLAVMLKACVKPDVITYSTLMD 312

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V TY  LING C +  +DEA+ L  EM    + P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            +VT ++LI+G CK   +     L D++ ++G   +VITY++LID  CK G ++ A A+ 
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALF 432

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M D+G+ P+  T+  L+ GL + G ++  + +  +L+  G    + TYN+++   CK 
Sbjct: 433 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQ 492

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           G  ++A+++L    KME     P+ VT+ ++I    +K    D NG
Sbjct: 493 GLLEEALTMLS---KMEDNGCIPDAVTFEIIIIALFKK----DENG 531



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 145/247 (58%), Gaps = 5/247 (2%)

Query: 216  GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
            G+ P + T NILI+ +C  G I   +   ++   +++ G  P+ +TF TLI+G C    +
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNF---SILAKILKRGYHPDTITFTTLINGLCLKGQV 1012

Query: 276  SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            + A+   +++ + G     V+Y +LING+C  G    A+ L  ++     KP+VV  N +
Sbjct: 1013 NKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072

Query: 336  INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
            I+  CK +LV KA  LF +++ +G+S  V+TYNTLI  +C  G++++A  + N M+ + +
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132

Query: 396  LPDVSTYNCLIAGLSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
             P+V TYN L+  L +EG   ++   ++++++ +NG +A  VT+ I++ AL +  ++ K 
Sbjct: 1133 NPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKV 1192

Query: 454  VSLLDEM 460
              LL EM
Sbjct: 1193 EKLLHEM 1199



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 136/255 (53%), Gaps = 9/255 (3%)

Query: 254  GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            GI P+  T N LI+ FC    I+    +  ++   G     +T+ +LINGLC+ G++++A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 314  VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            +   D+++A G + N V+   LING CK      A  L   I  +   P V+ YNT+IDA
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 374  YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             CK   +  A+ +   M  +G+  DV TYN LI G    G ++    ++N++V   +   
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 434  LVTYNILVGALCKDGKSKKAVSLLDE----MFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            + TYNILV ALCK+GK      LLDE    + KME      N VT+ ++I    +K + +
Sbjct: 1136 VRTYNILVDALCKEGK-----DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEND 1190

Query: 490  DANGLLNELLEKGLI 504
                LL+E++ +GL+
Sbjct: 1191 KVEKLLHEMIARGLL 1205



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 9/303 (2%)

Query: 133  HLGFE-AFKRAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFN 190
            H+GFE    R G    +  V S    +R      K +     +   ++ + I+ +L + N
Sbjct: 906  HVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLN 965

Query: 191  FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD- 249
             ++N  C  G++     I+  +   G  P  +T+  LI+G C KG + K       F D 
Sbjct: 966  ILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH----FHDK 1021

Query: 250  MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
            ++  G   N+V++ TLI+G CK  +  AA+K+  ++        VV YN++I+ LC    
Sbjct: 1022 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQL 1081

Query: 310  LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            + +A  L  EM   G+  +VVT N LI GFC    +++A  L + +  + ++P+V TYN 
Sbjct: 1082 VSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNI 1141

Query: 370  LIDAYCKEGR--MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            L+DA CKEG+  ++++ +M + M D G   +  T+  +I+ L  +   + V  +++E++ 
Sbjct: 1142 LVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201

Query: 428  NGM 430
             G+
Sbjct: 1202 RGL 1204



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 5/253 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            G++  + + N L+      G+      +  ++ +R    +  +F  ++NGLC  G++NKA
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
                + + + G     V+Y  LI+G CK   IG    A  + + +      P+ V +NT+
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCK---IGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            ID  CK + +S A  +F EM   GI+A VVTYN+LI G C+ GKL EA+ L ++M+   +
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132

Query: 326  KPNVVTSNALINGFCK--KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             PNV T N L++  CK  K L++++  +   + + G   + +T+  +I A  ++   +  
Sbjct: 1133 NPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKV 1192

Query: 384  FAMRNSMLDRGVL 396
              + + M+ RG+L
Sbjct: 1193 EKLLHEMIARGLL 1205



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 127/250 (50%), Gaps = 5/250 (2%)

Query: 273  ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            ++ S A+ +   +   GI   + T N LIN  C  G++    ++  +++  G  P+ +T 
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 333  NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
              LING C K  V KA    D +  QG   + ++Y TLI+  CK G    A  +   +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 393  RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            R   PDV  YN +I  L +   V     +  E+   G+ A +VTYN L+   C  GK K+
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 453  AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK--LEDANGLLNELLEKGLIPNQTTY 510
            A+ LL+   KM  +   PN+ TYN+L+   C++GK  L+++  +L+++ + G   N  T+
Sbjct: 1120 AIGLLN---KMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 511  QIVREEMMEK 520
            +I+   + EK
Sbjct: 1177 EIIISALFEK 1186



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +N+  A+  F  M        ++ +N +++          AV+L   +   G++P+++T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LIN FC    +     +   I ++G  P  +T NTLI   C +G+++ A    + +L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G   +  +Y  LI G+ + G+      ++ ++     +  +V Y+ ++ ALCK     +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L  E   M  +    ++VTY+ LI GFC +GKL++A GLLNE++ K + PN  TY I
Sbjct: 218 AYGLFSE---MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 513 VREEMMEKG 521
           + + + ++G
Sbjct: 275 LVDALCKEG 283



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 313  AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            AV+L   +   G++P++ T N LIN FC    +     +   I ++G  P  IT+ TLI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 373  AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              C +G++  A    + +L +G   +  +Y  LI G+ + G+      ++ ++     + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 433  GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             +V YN ++ ALCK     KA  L    F+M  +    ++VTYN LI GFC  GKL++A 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLF---FEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 493  GLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            GLLN+++ K + PN  TY I+ + + ++G
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEG 1150



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 10/248 (4%)

Query: 120  DMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            D+  L  + N   H+G     F    +    G     ++   L+  L  +G+     + +
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             ++  +  +LN  S+  ++NG+CK G    A  ++  +      P VV YN +ID  CK 
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              + K Y    +F +M   GI  + VT+NTLI GFC    +  A+ +  +M    I   V
Sbjct: 1080 QLVSKAY---GLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 295  VTYNSLINGLCVDGK--LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             TYN L++ LC +GK  LDE++++  +M  +G K N VT   +I+   +K   +K   L 
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 353  DDISEQGL 360
             ++  +GL
Sbjct: 1197 HEMIARGL 1204



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 38/219 (17%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D+AV+  + M+     P ++  N +++ F K K    A  L   +  +G+ P +IT N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +C  G++   F++   +L RG  PD                               
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDT------------------------------ 129

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                VT N L+  LC  G+ KKA+   D++     +    N V+Y  LI G C+ G   
Sbjct: 130 -----VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL---NQVSYGTLINGVCKIGDTR 181

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            A  LL ++  +   PN   Y  + + + +   + +  G
Sbjct: 182 AAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 5/157 (3%)

Query: 383  AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
            A ++ + +  +G+ PD+ T N LI      G +    +I+ +++  G     +T+  L+ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 443  ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             LC  G+  KA+   D++     +    N V+Y  LI G C+ G    A  LL ++  + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQL---NQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 503  LIPNQTTYQIVREEMMEKGFIPDIEGHMY--NISGTS 537
              P+   Y  + + + +   +    G  +  N+ G S
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGIS 1098


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 206/367 (56%), Gaps = 9/367 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K +V     L++A V+E ++E    + K M    +  +L  +N ++ GLC+A K+ +A
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ DM   G+ P   TY   I+ Y K G I     A+  FKDM+ +GI+PN V +  L
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV---AERYFKDMLSSGIVPNNVIYTIL 597

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C   N   A+  F+ M   G+   +  Y+++I+ L  +GK  EA+ +  + + +G+
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID--AYCKEGRMEDA 383
            P+V   N+LI+GFCK+  +EKA  L+D++   G++P+++ YNTLI+   YCK G + +A
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + + M+ +G+ PD   Y  LI G  +EGN+E   ++ +E     +   L  +N L+ +
Sbjct: 718 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDS 776

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK GK  +A  L D+M     +K  PNIVTY +LI  + +   +E+A  L  ++  + +
Sbjct: 777 FCKHGKVIEARELFDDMVD---KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833

Query: 504 IPNQTTY 510
           IPN  TY
Sbjct: 834 IPNTLTY 840



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 253/533 (47%), Gaps = 46/533 (8%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNT---------VILQLFNSDADPVLILRYFC 51
           PF   + T+ + + +++   W  L N + N           +LQ    D D V +  +F 
Sbjct: 50  PFDHYDDTVREFSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEID-DSVRLQNFFH 108

Query: 52  WSTKELRASHSL----LLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST 107
           WS+ ++     L    +L  RL +S ++ +      + L   ++  K      I  +L  
Sbjct: 109 WSSSKMSTPQYLHSYSILAIRLCNSGLIHQA----DNMLEKLLQTRK--PPLEILDSLVR 162

Query: 108 C-----SDSLCRNSIIIDMLMLAYVKNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQL 157
           C       +L    I ID   +         LGF       F  +   G   +++ CN L
Sbjct: 163 CYREFGGSNLTVFDIFIDKFRV---------LGFLNEASSVFIASISEGFFPTLICCNNL 213

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +R L+K         VY  M   +I  ++ ++  V+   CK G + K   ++ +M+    
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-EC 272

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P + TYN  I G C+ G + +   A  V K M+E G+ P+  T+  L+DGFCK +    
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDE---ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  +FE M S G+     TY +LI+G   +G ++EA+ ++DEM+  GLK NVVT NA+I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  K   + KA  LF+++   G+ P   TYN LID Y K   M  A  +   M  R + P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
              TY+ LI+GL    +++    ++++++ NG++  +  Y  L+ A  ++ + + A+ LL
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             M         P++  YN LI G C+  K+E+A  LL ++ EKG+ PN  TY
Sbjct: 510 KIMI---ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 210/413 (50%), Gaps = 26/413 (6%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+     GL  +  +   L+   +KEG  E+   +  EM  R ++LN+ ++N ++ G+ K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AG++ KA  +  +M   G+ P   TYN+LIDGY K      M KA  +  +M    + P+
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS---HDMAKACELLAEMKARKLTPS 450

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T++ LI G C   ++  A +V ++M  +G+   V  Y +LI     + + + A+ L  
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+A+G+ P++   N LI G C+ K VE+A++L  D+ E+G+ P+  TY   I+ Y K G
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ++ A      ML  G++P+   Y  LI G    GN     +    ++  G+   +  Y+
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++ +L K+GK+K+A+ +     K  K    P++  YN LI GFC++G +E A+ L +E+
Sbjct: 631 AIIHSLSKNGKTKEAMGVF---LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 499 LEKGLIPNQTTYQI------------------VREEMMEKGFIPDIEGHMYNI 533
           L  G+ PN   Y                    + +EM+ KG  PD  G++Y I
Sbjct: 688 LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD--GYIYCI 738



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 226/505 (44%), Gaps = 105/505 (20%)

Query: 110 DSLCRNSIIIDMLML-----AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D + RN +  ++ M      AYV+  +  +  E  K     G+   +   N L+  L + 
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            K E+ + +  +M  + I+ N  ++   +N   K+G++  A    +DM S G+ P  V Y
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 225 NILIDGYCKKGGI--------------------------------GKMYKADAVFKDMVE 252
            ILI G+C  G                                  GK  +A  VF   ++
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN--GLCVDGKL 310
            G++P+   +N+LI GFCK+ +I  A ++++EM  +GI   +V YN+LIN  G C  G L
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714

Query: 311 DEAVALRDEMMASGLKPN----------------------------------VVTSNALI 336
            EA  L DEM++ G+ P+                                  +   N+LI
Sbjct: 715 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 774

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + FCK   V +AR LFDD+ ++ L+P+++TY  LIDAY K   ME+A  +   M  R ++
Sbjct: 775 DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 834

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TY  L+   ++ GN   + ++  ++   G+    + Y ++  A CK+GKS +A+ L
Sbjct: 835 PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 894

Query: 457 LDE----------------MFKMEKEKKWPNIV----------------TYNVLIKGFCQ 484
           L++                +F + KEK+   ++                T N L+ GF +
Sbjct: 895 LNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYK 954

Query: 485 KGKLEDANGLLNELLEKGLIPNQTT 509
            G  ++A+ +L  +   G +P   +
Sbjct: 955 SGNEDEASKVLGVMQRLGWVPTSLS 979



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           L E + V    ISE G  P++I  N L+    K   M   + +  SM++  ++PDV TY 
Sbjct: 188 LNEASSVFIASISE-GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYT 246

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I    + G+V   + +++E+     +  L TYN  +G LC+ G   +A+    E+ K+
Sbjct: 247 NVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEAL----EVKKL 301

Query: 464 EKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             EK   P+  TY +L+ GFC++ + ++A  +   +   GL PN+ TY  + +  +++G 
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 523 IPD 525
           I +
Sbjct: 362 IEE 364


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 221/421 (52%), Gaps = 6/421 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +  + + V      S S +F A+     +   +  +  
Sbjct: 13  HTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIFVFS 72

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++       +C ++L  L+K   F+ V   YK +   
Sbjct: 73  GLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXILEC 132

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 193 FRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 249

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +   M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 250 IDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGL 309

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 310 KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEK 369

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+++ G++    TY +++   CK G   K   LL E   M+++   P++VTYNVL+ 
Sbjct: 370 MLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVTYNVLMN 426

Query: 481 G 481
           G
Sbjct: 427 G 427



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K ++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 126 YKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 185

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 186 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 245

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 246 FTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 305

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 306 MKGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIXLDDVAYTALISGL 358

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL PN  TY ++  E  +KG
Sbjct: 359 CQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKG 397



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++     D    Y+  +  +  +  D+   VL  L K         
Sbjct: 65  RSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             + +   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 181

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 182 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 241

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 242 NGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLI 301

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +    V Y  L+  LC++
Sbjct: 302 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQE 361

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   PN  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 362 GRSVDAEKMLREMLSVGLK---PNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 418

Query: 508 TTYQIV 513
            TY ++
Sbjct: 419 VTYNVL 424



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 17  SYCTMIHFLCTHQMLSEA-------------------KXLIQVVVSRKGKGSASAVFAAI 57

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY +   + DA        +        T   ++  L +  
Sbjct: 58  LETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 117

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V      ++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 118 YFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 171

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 172 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 231

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG +P+       I+GH  N
Sbjct: 232 DEMLVKGLVPNGVTFTTLIDGHCKN 256


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++   L+  L    K  +   +   M +R  + NL ++  V+NGLCK G ++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  M++  +   VV +N +ID  CK   +     A  +FK+M   GI PN VT+++L
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 226

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   +VT+N+LI+    +GK  EA  L D+M+   +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T N+LINGFC    ++KA+ +F+ +  +   P + TYNTLI  +CK  R+ED   
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ D  TY  LI GL  +G+ +  + +  ++V++G+   ++TY+IL+  LC
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
            +GK +KA+ + D M K E                     +  W            PN+V
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TYN +I G C K  L++A  LL ++ E G +P+  TY  +    +  G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 209/394 (53%), Gaps = 24/394 (6%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+   N+LL A+ K  KF+ V  + ++M+R  I  NL ++N ++N  C+  +++ A  ++
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+ +TF TLI G 
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + + M   G    +VTY  ++NGLC  G +D A  L ++M A+ ++ +V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+  CK + V+ A  LF ++  +G+ P+V+TY++LI   C  GR  DA  + + 
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++ + P++ T+N LI    +EG       + ++++   +   + TYN L+   C   +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305

Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             KA     +MF+ M  +  +P++ TYN LIKGFC+  ++ED   L  E+  +GL+ +  
Sbjct: 306 LDKA----KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 509 TY----------------QIVREEMMEKGFIPDI 526
           TY                Q V ++M+  G  PDI
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 187/356 (52%), Gaps = 17/356 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            +T  DSLC+   + D L L              FK     G++ +V++ + L+  L   
Sbjct: 188 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 233

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G++ D   +  +M  ++I  NL +FN +++   K GK  +A  + +DM    + P + TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LI+G+C      ++ KA  +F+ MV     P+  T+NTLI GFCK + +    ++F E
Sbjct: 294 NSLINGFCMHD---RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    VTY +LI GL  DG  D A  +  +M++ G+ P+++T + L++G C    
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +EKA  +FD + +  +   +  Y T+I+  CK G+++D + +  S+  +GV P+V TYN 
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +I+GL  +  ++    ++ ++  +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F    +     +++ V+  N ++ +L K    +D   ++KEM+ + I  N+ +++ ++
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           + LC  G+ + AS ++ DM    ++P +VT+N LID + K+G   K  +A+ +  DM++ 
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLHDDMIKR 284

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+  T+N+LI+GFC  + +  A ++FE M S      + TYN+LI G C   ++++ 
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  EM   GL  + VT   LI G       + A+ +F  +   G+ P ++TY+ L+D 
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G++E A  + + M    +  D+  Y  +I G+ + G V+   ++   L   G++  
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTYN ++  LC     ++A +LL    KM+++   P+  TYN LI+   + G    +  
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLK---KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L+ E+     + + +T  +V
Sbjct: 522 LIREMRSCRFVGDASTIGLV 541



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 152/272 (55%), Gaps = 3/272 (1%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV++  LP+   FN L+    K +     + + E+M   GI+  + TYN LIN  C   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +  A+AL  +MM  G +P++VT ++L+NG+C  K +  A  L D + E G  P  IT+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI       +  +A A+ + M+ RG  P++ TY  ++ GL + G+++   N++N++    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           + A +V +N ++ +LCK      A++L  E   ME +   PN+VTY+ LI   C  G+  
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKE---METKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           DA+ LL++++EK + PN  T+  + +  +++G
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 39/305 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++++ N L+ A VKEGKF + E ++ +M +R I+ ++ ++N ++NG C   +L+KA 
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P + TYN LI G+CK     ++     +F++M   G++ + VT+ TLI
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            G   D +   A KVF++M S G+   ++TY+ L++GLC +GKL++A+ + D M  S   
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
                                           G+KPNVVT N +I+G C K+L+++A  L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G  P   TYNTLI A+ ++G    +  +   M     + D ST   L+A +  
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 546

Query: 412 EGNVE 416
           +G ++
Sbjct: 547 DGRLD 551


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 218/412 (52%), Gaps = 42/412 (10%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL--NLDSFNFVLNGLCKAGKLN 203
            G++ S+++ N LL + +KEG+ + V  + KEM+ R      N  ++N V+ GL + G L 
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173

Query: 204  KASDIME----------------------------------DMKSLGVSPKVVTYNILID 229
            +A++++E                                  +M++ G+ P VVTYN +I 
Sbjct: 1174 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 1233

Query: 230  GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            G  + G +     A   F +M   G+LP+ +T+N+L++G+CK  N+  A+ +F ++   G
Sbjct: 1234 GLLQSGLVEA---AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 290  IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            +A  V+TYN LI+G C  G L+EA  L++EM   G  PNV T   L+ G    + +  AR
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAR 1350

Query: 350  VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
              FD++  +GL P    YNT I A    G +  AF +R  ++  G+  D  TYN LI GL
Sbjct: 1351 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGL 1410

Query: 410  SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
             + GN++  + +  ++V+NG++   +TY  L+ A C+ G  ++A  + + M     +   
Sbjct: 1411 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI---SDGLL 1467

Query: 470  PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P+ VT+ V+I  +C++G L  A G   ++LE+G+ PN+ TY ++   +   G
Sbjct: 1468 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 224/428 (52%), Gaps = 20/428 (4%)

Query: 105  LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            LS  + S   N +I  +L    VK +     ++      + G+  +V++ N ++  L++ 
Sbjct: 1184 LSKKASSFTYNPLITGLLARGCVKKV-----YDLQLEMENEGIMPTVVTYNAMIHGLLQS 1238

Query: 165  GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            G  E  +  + EM+   +  ++ ++N +LNG CKAG L +A  +  D++  G++P V+TY
Sbjct: 1239 GLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTY 1298

Query: 225  NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            NILIDGYC+   +G + +A  + ++M E G LPN  T+  L+ G     +++ A + F+E
Sbjct: 1299 NILIDGYCR---LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDE 1355

Query: 285  MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
            M S G+      YN+ I    + G +  A  LR+ +M  G+  + VT N LI+G CK   
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415

Query: 345  VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            ++ A+ L   +   GL P  ITY  LI A+C+ G + +A  + N+M+  G+LP   T+  
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475

Query: 405  LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            +I    R GN+        +++  G+    +TYN+L+ ALC+ G+++ A     EM    
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML--- 1532

Query: 465  KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
            +     N  TY +LI G C+ G  EDA     E+ + G+ P+  T++      + KGF  
Sbjct: 1533 ERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK-----ALLKGF-- 1585

Query: 525  DIEGHMYN 532
              +GH+++
Sbjct: 1586 --DGHVHH 1591



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 55/299 (18%)

Query: 279  MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
            +  F EM SHG+A  V   N ++  L    + D+  A+ +EM+  G++P++VT N L++ 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 339  FCKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYCKEGRMEDA------------- 383
            F K+   +K  +L  ++  +G    P+ +TYN +I    ++G +E+A             
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 384  ---------------------FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
                                 + ++  M + G++P V TYN +I GL + G VE  +   
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 423  NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             E+   G+   ++TYN L+   CK G  K+A+ L  +   + +    P ++TYN+LI G+
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD---LRRAGLAPTVLTYNILIDGY 1305

Query: 483  CQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------RE---EMMEKGFIPD 525
            C+ G LE+A  L  E+ E+G +PN  TY I+             RE   EM+ KG  PD
Sbjct: 1306 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPD 1364


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 229/458 (50%), Gaps = 13/458 (2%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDS--LCRNSIIIDMLMLA 125
           R+LH        P I  F  +     K    ST+  +LS   DS  +  N   +++L+ +
Sbjct: 64  RMLH----MHPPPSIVDFAKILTSITKVKRYSTVL-SLSRKMDSFGIPHNVYTLNVLINS 118

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           +    + +  F    +    G +    S   L++ L  EG+  +  +++ +M     + +
Sbjct: 119 FCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPD 178

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           +  +  ++NGLCK G  + A  ++  M+     P VV Y  LI   CK     +  +A  
Sbjct: 179 VVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR---QQTQAFN 235

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F +M+  GI PN VT N+L+   C          +  EM    I    ++  ++++ LC
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +G + +A  + D M  SG++P+VVT  ALI+G C +  +++A  +FD +  +G +P+V 
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           +YNTLI+ YCK  RM+ A  +   M  + ++P+  TYN LI GL   G ++    +  E+
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G    LVTY IL+  LCK+    KA++LL     +E     P+I  Y ++I G C+ 
Sbjct: 416 VACGQIPDLVTYRILLDYLCKNCHLDKAMALLK---AIEGSNLDPDIQIYTIVIDGMCRA 472

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G+LEDA  L + L  KGL PN  TY I+   + ++G +
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLL 510



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 193/350 (55%), Gaps = 4/350 (1%)

Query: 113 CRNSIII-DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           C+  +++   L+ +  K+ +    F  F      G+  ++++CN L+ AL   G+++ V 
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EM   +I  N  S   V++ LCK G + +A D+++ M   GV P VVTY  LIDG+
Sbjct: 270 TLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C +    +M +A  VF  MV  G  PN  ++NTLI+G+CK E +  AM +FEEM    + 
Sbjct: 330 CLRS---EMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTYN+LI+GLC  G+L +A+AL  EM+A G  P++VT   L++  CK   ++KA  L
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL 446

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              I    L P +  Y  +ID  C+ G +EDA  + +++  +G+ P+V TYN +  GL +
Sbjct: 447 LKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCK 506

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
            G ++    +  E+  N   A   TYN +     ++ ++ +A+ LL+EM 
Sbjct: 507 RGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 9/289 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  M+     P+ V F  ++    K +  S  + +  +M S GI   V T N LIN  C 
Sbjct: 62  FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCH 121

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +++ A ++  +++  G +P+  +   LI G C +  + +A  LFD +  +G  P V+ 
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVI 181

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y TLI+  CK G    A  +  SM      PDV  Y  LI  L ++       N+ +E++
Sbjct: 182 YATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI 241

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   +VT N LV ALC  G+ K   +LL+EM      K  PN ++   ++   C++G
Sbjct: 242 TKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV---DSKIMPNAISLTTVVDALCKEG 298

Query: 487 KLEDANGLLNELLEKGLIPNQTTY------QIVREEMMEKGFIPDIEGH 529
            +  A+ +++ + + G+ P+  TY        +R EM E   + D+  H
Sbjct: 299 MVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 13/284 (4%)

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           M    + F  ++ N      + FNTL D          A+  F  M        +V +  
Sbjct: 30  MLSIPSPFLSLLHNRFRSKYLHFNTLDD----------ALSSFNRMLHMHPPPSIVDFAK 79

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++  +    +    ++L  +M + G+  NV T N LIN FC    V  A  +   I + G
Sbjct: 80  ILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLG 139

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P   ++ TLI   C EG++ +A  + + M+  G  PDV  Y  LI GL + G+     
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            ++  +     +  +V Y  L+ +LCKD +  +A +L  EM     +   PNIVT N L+
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI---TKGISPNIVTCNSLV 256

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
              C  G+ +  N LLNE+++  ++PN  +   V + + ++G +
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 201/380 (52%), Gaps = 22/380 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K     G      + ++++  L    K E    +++EMK   +  ++ ++  +++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CKAG + +A  + E+M+S+G SP VVTY  LI  Y K   +    +A+ +F  MV+ G
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP---QANDIFHRMVDAG 388

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM----------------GSHGIAAGVVTYN 298
             PN+VT+  L+DG CK  NIS A +V+ ++                  H +A  VVTY 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++GLC   K+D A  L D M++SG +PN +  +ALI+GFCK   ++ A+ +F  +++ 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  PSV TY +LID   K+GR++ A  + + ML     P+V TY  +I GL R G  E  
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++ +   G    +VTY  L+  L K GK   +   LD   +M ++   PN VTY VL
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS---LDLFTQMSRKGCSPNYVTYRVL 625

Query: 479 IKGFCQKGKLEDANGLLNEL 498
           I   C  G L+ A  LL E+
Sbjct: 626 INHLCAAGLLDKARLLLGEM 645



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 200/381 (52%), Gaps = 22/381 (5%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GKF+    + KEM R+    +  +++ V+  LC A K+ KA  + ++MK +GV+
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY ILID +CK G I +   A  +F++M   G  P  VT+  LI  + K + +  A
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQ---AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 377

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-------------- 324
             +F  M   G     VTY +L++GLC  G + +A  +  +++ +               
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437

Query: 325 --LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             L PNVVT  AL++G CK   V+ A  L D +   G  P+ I Y+ LID +CK G+++ 
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G LP V TY  LI  + ++G ++    ++++++ +     +VTY  ++ 
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G+S+KA+ LL     ME++   PN+VTY  LI G  + GK++ +  L  ++  KG
Sbjct: 558 GLCRIGESEKALKLLS---LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN  TY+++   +   G +
Sbjct: 615 CSPNYVTYRVLINHLCAAGLL 635



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 20/390 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G+   V +   L+ +  K G  E  +++++EM+       + ++  +++
Sbjct: 307 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-----------A 243
              KA ++ +A+DI   M   G  P  VTY  L+DG CK G I K ++           A
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426

Query: 244 DAVFKDMVEN--GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           D+ F    E+   + PN VT+  L+DG CK   +  A ++ + M S G     + Y++LI
Sbjct: 427 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GK+D A  +  +M   G  P+V T  +LI+   K   ++ A  +   + +   +
Sbjct: 487 DGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 546

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY  +ID  C+ G  E A  + + M ++G  P+V TY  LI GL + G ++   ++
Sbjct: 547 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 606

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT-YNVLIK 480
             ++   G     VTY +L+  LC  G   KA  LL EM    K+  WP  +  Y   I+
Sbjct: 607 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYLQGYRCAIQ 662

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           GF +      + G+L E+   G +P    Y
Sbjct: 663 GFSK--SFIASLGILEEMESYGTVPIAPVY 690



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 194/469 (41%), Gaps = 78/469 (16%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           LGF   K   + G      +      AL KEG++ D       ++R   +L+      ++
Sbjct: 58  LGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMI 114

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GL +A   ++A   +  M+     P VVTY  L+ G+ KK  +G   +   +   M+  
Sbjct: 115 SGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR---IINMMMTE 171

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD------ 307
           G  PN   FN+L+  +C +++ + A K+   M + G   G V YN  I  +C        
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231

Query: 308 -----------------------------------GKLDEAVALRDEMMASGLKPNVVTS 332
                                              GK D+A  L  EMM  G  P+  T 
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + +I   C    VEKA +LF ++   G++P V TY  LID++CK G +E A  +   M  
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P V TY  LI    +   V    +I + +V+ G R   VTY  LV  LCK G   K
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411

Query: 453 AVSLL------------DEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           A  +             D  F  E +    PN+VTY  L+ G C+  K++ A+ LL+ +L
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471

Query: 500 EKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYN 532
             G  PN   Y                Q V  +M + G++P +  H Y 
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV--HTYT 518



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 186/370 (50%), Gaps = 24/370 (6%)

Query: 171 EYVYKEMKRRRIELN-LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           E +Y EM      LN ++  NF    LC  GK +KA  ++++M   G  P   TY+ +I 
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFA-RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C      K+ KA  +F++M   G+ P+  T+  LID FCK   I  A  +FEEM S G
Sbjct: 297 FLCHAT---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            +  VVTY +LI+      ++ +A  +   M+ +G +PN VT  AL++G CK   + KA 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 350 VLFDDI----------------SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            ++  +                    L+P+V+TY  L+D  CK  +++ A  + ++ML  
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+   Y+ LI G  + G ++  + +  ++   G    + TY  L+  + KDG+   A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + +L +M K   +   PN+VTY  +I G C+ G+ E A  LL+ + EKG  PN  TY  +
Sbjct: 534 MKVLSQMLK---DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590

Query: 514 REEMMEKGFI 523
            + + + G I
Sbjct: 591 IDGLGKAGKI 600



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 19/388 (4%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D+G + S ++ N L++ L   G+ +    V KEM      ++  +     + LCK G+  
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY--KADAVFKDMVENGILPNEVT 261
            A D++E  +   +   + T+ I        G +   Y  +A +    M  N  +PN VT
Sbjct: 93  DALDMIER-EDFKLDTVLCTHMI-------SGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + TL+ GF K + +    ++   M + G       +NSL++  C +     A  L + M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 322 ASGLKPNVVTSNALINGFCKKK------LVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             G  P  V  N  I   C ++      L++ A  ++ ++       + +         C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G+ + AF +   M+ +G +PD STY+ +I  L     VE    +  E+   G+   + 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY IL+ + CK G  ++A  L +EM  +      P +VTY  LI  + +  ++  AN + 
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCS---PTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
           + +++ G  PN  TY  + + + + G I
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNI 409



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 147/364 (40%), Gaps = 50/364 (13%)

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A D  + +K  G  P  VTYN L+      G +   ++   V K+M E+G   +  T 
Sbjct: 22  HAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFR---VQKEMSESGFCMDRFTV 78

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
                  CK+   + A+ + E           V    +I+GL      DEA++    M  
Sbjct: 79  GCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 135

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +   PNVVT   L++GF KKK +   + + + +  +G +P+   +N+L+ +YC E     
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSRE----------------GNVEGVRNIMN--- 423
           A+ + N M   G  P    YN  I  +  +                G +     ++N   
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 424 ------------------ELVNNGMRAGLV----TYNILVGALCKDGKSKKAVSLLDEMF 461
                             +L+   MR G V    TY+ ++  LC   K +KA  L  EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM- 314

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           KM      P++ TY +LI  FC+ G +E A  L  E+   G  P   TY  +    ++  
Sbjct: 315 KMVGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372

Query: 522 FIPD 525
            +P 
Sbjct: 373 QVPQ 376



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 11/299 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+  + K  K     E F +    G   SV +   L+  + K+G+ +    V 
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M +     N+ ++  +++GLC+ G+  KA  ++  M+  G SP VVTY  LIDG    
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL--- 594

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+  +  +F  M   G  PN VT+  LI+  C    +  A  +  EM        +
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y   I G         ++ + +EM + G  P       LI+ F K   +E A  L  +
Sbjct: 655 QGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 355 ISEQGLSPSVIT----YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + E  +  SV T    Y +LI A C   ++E+AF + + M  RG +P++S + CLI GL
Sbjct: 713 MME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 108/294 (36%), Gaps = 63/294 (21%)

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           AA V T  + +   C     D    L+D     G +P+ VT NAL+        V+    
Sbjct: 6   AAAVATLRASLRRTCSHAAGDSEDPLKD----FGYRPSKVTYNALVQVLSSAGQVDLGFR 61

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF---------------------AMRNS 389
           +  ++SE G      T      A CKEGR  DA                       M  S
Sbjct: 62  VQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEAS 121

Query: 390 MLDRGV-----------LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             D  +           +P+V TY  L++G  ++  +   + I+N ++  G       +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED------AN 492
            LV + C +     A  LL+   +M      P  V YN+ I   C + KL        A 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLN---RMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 493 GLLNELLEKGLIPNQT-----------------TYQIVREEMMEKGFIPDIEGH 529
            +  E+L    + N+                   +Q+++ EMM KGF+PD   +
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK-EMMRKGFVPDTSTY 291


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 229/472 (48%), Gaps = 63/472 (13%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D +    ++ D+++ + + N    +G     +E + R    G++ +V   N LL    ++
Sbjct: 349 DEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQ 408

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
              E    ++ E     I  N+ ++N +L  L + GK+N+A ++ E M S G++P +V+Y
Sbjct: 409 NLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSY 467

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LI G+CKKG + K Y   ++ K ++E G+ PN VT+  LIDGF K  +   A  VFE+
Sbjct: 468 NNLILGHCKKGCMDKAY---SMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524

Query: 285 MGS-----------------------------------HGIAAGVVTYNSLINGLCVDGK 309
           M +                                    G  +  +TYNS+I+G   +G 
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D A+    EM  SG+ P+V+T  +LI+G CK   +  A  +  D+  +G+   V+ Y+ 
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LID +CK   ME A      +LD G+ P+   YN +I+G     N+E   N+  E++ N 
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   L  Y  ++G L K+GK   A+ L  EM     +   P+IV Y VLI G    G+LE
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEML---SKDIVPDIVMYTVLINGLSNNGQLE 761

Query: 490 DANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           +A+ +L E+    + P+   Y I                + +EM++KG +PD
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPD 813



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 234/432 (54%), Gaps = 38/432 (8%)

Query: 115 NSIIIDMLMLAY-VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           N  I++ L+  +  +N+  H  +  F  A ++G+ ++V++ N LL+ L + GK  +   +
Sbjct: 394 NVFIVNSLLEGFHEQNLLEH-AYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNL 451

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           +++M  + I  +L S+N ++ G CK G ++KA  +++ +   G+ P  VTY +LIDG+ K
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFK 511

Query: 234 KG-----------------------------GIGKMYKADAV---FKDMVENGILPNEVT 261
           KG                             G+GK  +         + ++ G +   +T
Sbjct: 512 KGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSIT 571

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N++IDGF K+  + +A+  + EM   GI+  V+TY SLI+GLC   K+  A+ +  +M 
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+K +VV  +ALI+GFCK   +E A   F ++ + GL+P+ + YN++I  +     ME
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  +   M+   V  D+  Y  +I GL +EG +    ++ +E+++  +   +V Y +L+
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             L  +G+ + A  +L EM   +     P+++ YN+LI G  ++G L++A  L +E+L+K
Sbjct: 752 NGLSNNGQLENASKILKEM---DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDK 808

Query: 502 GLIPNQTTYQIV 513
           GL+P+ TTY I+
Sbjct: 809 GLVPDDTTYDIL 820



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 244/506 (48%), Gaps = 10/506 (1%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVV-AKKYPKIRSFLHM 88
           N  ++ L +  ++P   L++F    ++     ++     L+H L   +K    ++  L+ 
Sbjct: 61  NRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNN 120

Query: 89  FVKNGKFTSVSTIFHALSTCSD--SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           +V      S       L  CS       +S + + L+ ++V+  K     E F+   ++ 
Sbjct: 121 YVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHD 180

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V   N LL A+V+     D   +Y EM  R I  +  + + V+    K GK  +  
Sbjct: 181 LVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVE 240

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              ++ K  G+      Y+IL+   C++  +     A  + K+M E G +P++ T+  +I
Sbjct: 241 KFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNL---ACELLKEMREFGWVPSKGTYTAVI 297

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
               K  N   A+++ +EM S G+   V+   SL+ G CV G ++ A+ L DE++  G+ 
Sbjct: 298 VACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVV 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+VV  + LING  K   +EKA  L+  +   G+ P+V   N+L++ + ++  +E A+ +
Sbjct: 358 PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGL 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            +  ++ G+  +V TYN L+  L   G V    N+  ++V+ G+   LV+YN L+   CK
Sbjct: 418 FDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCK 476

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G   KA S+L  +  +E+  K PN VTY +LI GF +KG  E A  +  +++   + P 
Sbjct: 477 KGCMDKAYSMLKSI--LERGLK-PNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPT 533

Query: 507 QTTYQIVREEMMEKGFIPDIEGHMYN 532
             T+  V   + + G + + +  + N
Sbjct: 534 DHTFNTVINGLGKTGRVSETQDKLNN 559



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 150/263 (57%), Gaps = 3/263 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  S+ ++ N ++    KEG  +     Y+EM    I  ++ ++  +++GLCK+ K+  A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  DMK  G+   VV Y+ LIDG+CK   +  M  A   F ++++ G+ PN V +N++
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCK---MHDMESASKFFTELLDIGLTPNTVVYNSM 680

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GF    N+ AA+ + +EM  + +   +  Y S+I GL  +GKL  A+ L  EM++  +
Sbjct: 681 ISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI 740

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++V    LING      +E A  +  ++    ++PSV+ YN LI    +EG +++AF 
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800

Query: 386 MRNSMLDRGVLPDVSTYNCLIAG 408
           + + MLD+G++PD +TY+ L+ G
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNG 823



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 38/355 (10%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + K       +   K   + GLK + ++   L+    K+G  E    V+++M    
Sbjct: 470 LILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN 529

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +FN V+NGL K G++++  D + +    G     +TYN +IDG+ K+G +    
Sbjct: 530 IAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSAL 589

Query: 242 KADAVFKDMVENGILPNEVTFNTLI----------------------------------- 266
            A   +++M E+GI P+ +T+ +LI                                   
Sbjct: 590 LA---YREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALI 646

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK  ++ +A K F E+   G+    V YNS+I+G      ++ A+ L  EM+ + + 
Sbjct: 647 DGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVP 706

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++    ++I G  K+  +  A  L+ ++  + + P ++ Y  LI+     G++E+A  +
Sbjct: 707 CDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKI 766

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
              M    + P V  YN LIAG  REGN++    + +E+++ G+     TY+ILV
Sbjct: 767 LKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 208/403 (51%), Gaps = 35/403 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++   ++    KEG       ++KEM +R I  +L +++ V++ LCKA  + KA   + 
Sbjct: 223 VVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLR 282

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + GV P   TYN LI GY      G+  +A  VFK+M  + ILP+ VT N L+   C
Sbjct: 283 QMVNKGVLPDNWTYNNLIYGY---SSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A  VF+ M   G    V +Y  ++NG    G L +   L D M+  G+ P++ 
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T + LI  +    +++KA ++F+++ + G+ P V+TY T+I A C+ G+M+DA    N M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D+GV PD   Y+CLI G    G++   + ++ E++NNGMR  +V ++ ++  LCK G+ 
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 451 KKAVSLLDEMF----------------------KMEKEKKW----------PNIVTYNVL 478
             A ++ D                         KMEK  +           PN+V Y  L
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + G+C+ G++++   L  E+L+KG+ P+   Y I+ + +   G
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 194/359 (54%), Gaps = 6/359 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+      G++++   V+KEM+R  I  ++ + N ++  LCK GK+ +A D+ + M  
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM 356

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P V +Y I+++GY  KG +  M     +F  M+ +GI P+  TF+ LI  +     
Sbjct: 357 KGQNPDVFSYKIMLNGYATKGCLVDMTD---LFDLMLGDGIAPDIYTFSVLIKAYANCGM 413

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  AM +F EM  HG+   VVTY ++I  LC  GK+D+A+   ++M+  G+ P+    + 
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI GFC    + KA+ L  +I   G+   ++ ++++I+  CK GR+ DA  + +  ++ G
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD   Y+ L+ G    G +E    + + +V+ G+   +V Y  LV   CK G+  + +
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           SL  EM  ++K  K P+ + YN++I G    G+   A    +E+ E G+  N+ TY IV
Sbjct: 594 SLFREM--LQKGIK-PSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIV 649



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 203/389 (52%), Gaps = 15/389 (3%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +LM    +  +P L    F +    GL+  ++  N LL+   +  + ++   +   +  R
Sbjct: 120 ILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI---LLHR 176

Query: 181 RIEL----NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV--SPKVVTYNILIDGYCKK 234
             EL    ++ S++ +L  LC  GK  +A D++  M   G   SP VV Y  +ID + K+
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G + K   A  +FK+MV+ GI P+ VT+++++   CK   +  A     +M + G+    
Sbjct: 237 GDVNK---ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDN 293

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN+LI G    G+  EAV +  EM    + P+VVT N L+   CK   +++AR +FD 
Sbjct: 294 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDT 353

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++ +G +P V +Y  +++ Y  +G + D   + + ML  G+ PD+ T++ LI   +  G 
Sbjct: 354 MAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM 413

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    I NE+ ++G++  +VTY  ++ ALC+ GK   A+   ++M     +   P+   
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID---QGVAPDKYA 470

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           Y+ LI+GFC  G L  A  L+ E++  G+
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGM 499



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 224/464 (48%), Gaps = 23/464 (4%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG----KFTSVSTIFHALSTCS--------D 110
           L+    ++H+L  A+   K  +FL   V  G     +T  + I+   ST           
Sbjct: 258 LVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317

Query: 111 SLCRNSIIID-----MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
            + R+SI+ D     MLM +  K  K     + F      G    V S   +L     +G
Sbjct: 318 EMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKG 377

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
              D+  ++  M    I  ++ +F+ ++      G L+KA  I  +M+  GV P VVTY 
Sbjct: 378 CLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +I   C+   IGKM  A   F  M++ G+ P++  ++ LI GFC   ++  A ++  E+
Sbjct: 438 TVIAALCR---IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEI 494

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            ++G+   +V ++S+IN LC  G++ +A  + D  +  G  P+ V  + L++G+C    +
Sbjct: 495 MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKM 554

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  +FD +   G+ P+V+ Y TL++ YCK GR+++  ++   ML +G+ P    YN +
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL   G     +   +E+  +G+     TYNI++    K+    +A+ L  E+  M  
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNV 674

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +    +I+T N +I G  Q  ++E+A  L   +   GL+P   T
Sbjct: 675 KI---DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 206/398 (51%), Gaps = 14/398 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQ-----LLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           P L    F RA        VLS        L+    +  + E     + ++ R  + +++
Sbjct: 91  PALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDI 150

Query: 187 DSFNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
              N +L G C+A + ++A DI+      LG  P V +Y+IL+   C +G  G+   AD 
Sbjct: 151 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ---ADD 207

Query: 246 VFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + + M E G +  P+ V + T+ID F K+ +++ A  +F+EM   GI   +VTY+S+++ 
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    + +A A   +M+  G+ P+  T N LI G+      ++A  +F ++    + P 
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+T N L+ + CK G++++A  + ++M  +G  PDV +Y  ++ G + +G +  + ++ +
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+   + T+++L+ A    G   KA+ + +E   M      P++VTY  +I   C
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNE---MRDHGVKPDVVTYTTVIAALC 444

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + GK++DA    N+++++G+ P++  Y  + +     G
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 482



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 185/408 (45%), Gaps = 56/408 (13%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK--------------LNKASDIMEDMK 213
           ED   +  E++RR   +     N  L  L +A                 N+A+   +  +
Sbjct: 50  EDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPR 109

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
            L  SP   TY IL+D  C +    ++  A A F  ++  G+  + +  N L+ GFC+ +
Sbjct: 110 VL--SPTSHTYAILMD-CCTRAHRPEL--ALAFFGQLLRTGLRVDIIIANHLLKGFCEAK 164

Query: 274 NISAAMKVF-EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG---LKPNV 329
               A+ +        G    V +Y+ L+  LC  GK  +A  L   MMA G     P+V
Sbjct: 165 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPDV 223

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V    +I+ F K+  V KA  LF ++ ++G+ P ++TY++++ A CK   M  A A    
Sbjct: 224 VAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQ 283

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++GVLPD  TYN LI G S  G  +    +  E+  + +   +VT N+L+G+LCK GK
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343

Query: 450 SKKAVSLLDEM-----------FK---------------------MEKEKKWPNIVTYNV 477
            K+A  + D M           +K                     M  +   P+I T++V
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           LIK +   G L+ A  + NE+ + G+ P+  TY  V   +   G + D
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDD 451



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 6/273 (2%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-A 315
           P   T+  L+D   +      A+  F ++   G+   ++  N L+ G C   + DEA+  
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG--LSPSVITYNTLIDA 373
           L       G  P+V + + L+   C +    +A  L   ++E G   SP V+ Y T+ID 
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           + KEG +  A  +   M+ RG+ PD+ TY+ ++  L +   +      + ++VN G+   
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TYN L+      G+ K+AV +  EM    +    P++VT N+L+   C+ GK+++A  
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           + + +  KG  P+  +Y+I+      KG + D+
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDM 382


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            LM AY+++   H   + F+    +       +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN V++  CK G++ +A  + + +   G+ P VV++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F EM   G+    VT+ +L
Sbjct: 191 FRLKSA---MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+  C +G +D A+ +  +M++ G  P+++T N LI G CKK  +++ R L D++S  GL
Sbjct: 248 IDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  L++GL +EG  +    
Sbjct: 308 KPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +  E+++ G++    TY +++   CK G  + A  LL E   M+++   P +VT
Sbjct: 368 MFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKE---MQRDGHVPCVVT 418



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    ++  K+ +  +  D+   VL  L K        D
Sbjct: 63  RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NI++  +CK+G   +M +A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEG---EMRRAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+DEA  L +EM+  GL P
Sbjct: 180 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+  CK  +V+ A  ++  +  QG SP +ITYNTLI   CK+G ++   A+ 
Sbjct: 240 NGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M   G+ PD  TY  LI G  +EG++E        ++   +R   V Y  LV  LC++
Sbjct: 300 DEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G++  A  +  EM  +  +   P+  TY ++I  FC+KG +  A+ LL E+   G +P  
Sbjct: 360 GRADDAEKMFREMLSVGLK---PDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN ++  FCK+  +  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  V++A  LF+++ ++GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G ++ A  +   ML +G  PD+ TYN LI GL ++G+++ VR +++E+ 
Sbjct: 244 FTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG++   +TY  L+   CK+G  + A      M    KE    + V Y  L+ G CQ+G
Sbjct: 304 MNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMI---KESIRLDNVAYTALVSGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + +DA  +  E+L  GL P+  TY ++  E  +KG
Sbjct: 361 RADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKG 395



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            + +I E G   S+  +N ++  +CKEG M  A ++ +++   G+ P V ++N L+ G  
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R G+++    + + +  +G++  + TY++L+  LCK+ K  +A  L +EM         P
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLD---RGLVP 239

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           N VT+  LI   C+ G ++ A  +  ++L +G  P+  TY  +   + +KG +  +  
Sbjct: 240 NGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRA 297


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 211/380 (55%), Gaps = 6/380 (1%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I+D+L+  Y K          F +     L   V +CN++LR L  +        VY+ M
Sbjct: 472 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 531

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               I+  + ++N +L+  CK GK+ +  D++ +M+  G +P  VTYN+LI+G  KK   
Sbjct: 532 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK--- 588

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G+  +A  +  +M++ G+  +  T+N LI G+     ++ A+ + EEM   G +  V TY
Sbjct: 589 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATY 648

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           NS I GLC  G++ +A+    +M+A+ L P+VV+ N LI G+C+   + KA +LFD++  
Sbjct: 649 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 708

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
             L P+++TYNTL+D  C++G +E A  ++  M++ G+ PD+ TY  L+ G  + G++  
Sbjct: 709 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 768

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
            +   +E+++ G+      Y   +    K G + +A SL +EM     +   P+++ YNV
Sbjct: 769 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML---AKGFPPDLIIYNV 825

Query: 478 LIKGFCQKGKLEDANGLLNE 497
           ++ G C+ G LE+A+ LL +
Sbjct: 826 VVDGLCKLGNLEEASELLQK 845



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 167/310 (53%), Gaps = 21/310 (6%)

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           M KA  V++ M E GI P  VT+NTL+D +CK   +   + +  EM   G A   VTYN 
Sbjct: 521 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 580

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LINGL   G+ ++A  L  EM+ +GLK +  T N LI G+  K L+ +A  L +++  +G
Sbjct: 581 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKG 640

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            SP+V TYN+ I   CK GRM DA    + ML   +LPDV +YN LI G  R GN+    
Sbjct: 641 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 700

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + +EL +  +   +VTYN L+  LC+ G+ + A  L  EM     E   P+IVTY +L+
Sbjct: 701 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI---NEGIAPDIVTYTILV 757

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFI 523
            G C+ G L  A    +E+L +GL  +   Y                  ++EEM+ KGF 
Sbjct: 758 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 817

Query: 524 PDIEGHMYNI 533
           PD+   +YN+
Sbjct: 818 PDL--IIYNV 825



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 168/308 (54%), Gaps = 3/308 (0%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+ +Y K  K   G +        G   + ++ N L+  L K+G+FE  + +  E
Sbjct: 541 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 600

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M +  ++++  ++N ++ G    G L +A  + E+M   G SP V TYN  I G CK   
Sbjct: 601 MLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCK--- 657

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G+M  A     DM+ N +LP+ V++NTLI G+C+  N+  A  +F+E+ S  +   +VT
Sbjct: 658 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 717

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+L++GLC  G+L+ A  L+ EM+  G+ P++VT   L+NG CK   +  A+  FD++ 
Sbjct: 718 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 777

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +GL      Y T I    K G    AF+++  ML +G  PD+  YN ++ GL + GN+E
Sbjct: 778 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 837

Query: 417 GVRNIMNE 424
               ++ +
Sbjct: 838 EASELLQK 845



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 168/320 (52%), Gaps = 27/320 (8%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           VS K++  ++LI  Y KK  + +     +VF  M+++ + P+    N ++      + +S
Sbjct: 468 VSVKIL--DLLIWVYSKKSMVEQCL---SVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 522

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V+  MG  GI   +VTYN+L++  C  GK+ + + L  EM   G  PN VT N LI
Sbjct: 523 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 582

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG  KK   E+A+ L  ++ + GL  S  TYN LI  Y  +G + +A +++  M+ +G  
Sbjct: 583 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGAS 642

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V+TYN  I GL + G +      +++++ N +   +V+YN L+   C+ G   KA  L
Sbjct: 643 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 702

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            DE+  +     +P IVTYN L+ G C++G+LE A                   Q ++ E
Sbjct: 703 FDELRSI---YLFPTIVTYNTLLDGLCRQGELEVA-------------------QQLKVE 740

Query: 517 MMEKGFIPDIEGHMYNISGT 536
           M+ +G  PDI  +   ++G+
Sbjct: 741 MINEGIAPDIVTYTILVNGS 760



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN----SIIIDMLMLAYVKNMKPHLGFEAF 139
           SF++   K G+ +       A+   SD L  N     +  + L+  Y +       F  F
Sbjct: 650 SFIYGLCKLGRMSD------AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 703

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
                  L  ++++ N LL  L ++G+ E  + +  EM    I  ++ ++  ++NG CK 
Sbjct: 704 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 763

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G L+ A +  ++M   G+      Y   I G  K   +G   +A ++ ++M+  G  P+ 
Sbjct: 764 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK---LGDTSRAFSLQEEMLAKGFPPDL 820

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMG 286
           + +N ++DG CK  N+  A ++ ++ G
Sbjct: 821 IIYNVVVDGLCKLGNLEEASELLQKDG 847


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +   ++   L+  L    K  +   +   M +R  + NL ++  V+NGLCK G ++ A
Sbjct: 109 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 168

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  M++  +   VV +N +ID  CK   +     A  +FK+M   GI PN VT+++L
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 225

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C     S A ++  +M    I   +VT+N+LI+    +GK  EA  L D+M+   +
Sbjct: 226 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 285

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T N+LINGFC    ++KA+ +F+ +  +   P + TYNTLI  +CK  R+ED   
Sbjct: 286 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 345

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ D  TY  LI GL  +G+ +  + +  ++V++G+   ++TY+IL+  LC
Sbjct: 346 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 405

Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
            +GK +KA+ + D M K E                     +  W            PN+V
Sbjct: 406 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 465

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           TYN +I G C K  L++A  LL ++ E G +P+  TY  +    +  G
Sbjct: 466 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 187/356 (52%), Gaps = 17/356 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
            +T  DSLC+   + D L L              FK     G++ +V++ + L+  L   
Sbjct: 187 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 232

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G++ D   +  +M  ++I  NL +FN +++   K GK  +A  + +DM    + P + TY
Sbjct: 233 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 292

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LI+G+C      ++ KA  +F+ MV     P+  T+NTLI GFCK + +    ++F E
Sbjct: 293 NSLINGFCMHD---RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 349

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    VTY +LI GL  DG  D A  +  +M++ G+ P+++T + L++G C    
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +EKA  +FD + +  +   +  Y T+I+  CK G+++D + +  S+  +GV P+V TYN 
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +I+GL  +  ++    ++ ++  +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L F    +     +++ V+  N ++ +L K    +D   ++KEM+ + I  N+ +++ ++
Sbjct: 167 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 226

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           + LC  G+ + AS ++ DM    ++P +VT+N LID + K+G   K  +A+ +  DM++ 
Sbjct: 227 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLHDDMIKR 283

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+  T+N+LI+GFC  + +  A ++FE M S      + TYN+LI G C   ++++ 
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  EM   GL  + VT   LI G       + A+ +F  +   G+ P ++TY+ L+D 
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C  G++E A  + + M    +  D+  Y  +I G+ + G V+   ++   L   G++  
Sbjct: 404 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 463

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTYN ++  LC     ++A +LL    KM+++   P+  TYN LI+   + G    +  
Sbjct: 464 VVTYNTMISGLCSKRLLQEAYALLK---KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 520

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L+ E+     + + +T  +V
Sbjct: 521 LIREMRSCRFVGDASTIGLV 540



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 39/305 (12%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++++ N L+ A VKEGKF + E ++ +M +R I+ ++ ++N ++NG C   +L+KA 
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E M S    P + TYN LI G+CK     ++     +F++M   G++ + VT+ TLI
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 366

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
            G   D +   A KVF++M S G+   ++TY+ L++GLC +GKL++A+ + D M  S   
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426

Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
                                           G+KPNVVT N +I+G C K+L+++A  L
Sbjct: 427 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 486

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E G  P   TYNTLI A+ ++G    +  +   M     + D ST   L+A +  
Sbjct: 487 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 545

Query: 412 EGNVE 416
           +G ++
Sbjct: 546 DGRLD 550



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 171/373 (45%), Gaps = 85/373 (22%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFN----------------------------------- 263
           K+  A  +F  MV++  LP+   FN                                   
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 264 --TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
             +L++G+C  + IS A+ + ++M   G     +T+ +LI+GL +  K  EAVAL D M+
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G +PN+VT   ++NG CK+  ++ A  L + +    +   V+ +NT+ID+ CK   ++
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M  +G+ P+V TY+ LI+ L   G       ++++++   +   LVT+N L+
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 442 GALCKDGKSKKAVSLLDEMFK----------------------MEKEKK----------W 469
            A  K+GK  +A  L D+M K                      ++K K+          +
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIV 513
           P++ TYN LIKGFC+  ++ED   L  E+  +GL+ +  TY                Q V
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 514 REEMMEKGFIPDI 526
            ++M+  G  PDI
Sbjct: 382 FKQMVSDGVPPDI 394



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 137/253 (54%), Gaps = 5/253 (1%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV--ALRDEMMASGLKPN 328
           KD  +  A+ +F  M        +  +N L++ +    K D  +  AL  +MM  G +P+
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +VT ++L+NG+C  K +  A  L D + E G  P  IT+ TLI       +  +A A+ +
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+ RG  P++ TY  ++ GL + G+++   N++N++    + A +V +N ++ +LCK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
               A++L  EM   E +   PN+VTY+ LI   C  G+  DA+ LL++++EK + PN  
Sbjct: 199 HVDDALNLFKEM---ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 509 TYQIVREEMMEKG 521
           T+  + +  +++G
Sbjct: 256 TFNALIDAFVKEG 268


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 226/431 (52%), Gaps = 50/431 (11%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G + ++ + N +L  L K G+F++V  V++ M    ++ ++ ++  +++GLC++G ++
Sbjct: 257 DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVD 316

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------ADAVFK 248
            A+ +  ++   G+      YN L+ G+C+ G + + +K                + + K
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376

Query: 249 DMVENGI-----------------LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            + ++G+                 +P+ VTF TLI G C++   + A  +FEE    G  
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V +Y+S+INGLC  G+L +AV + ++M   G KPN    NALI+GFC+      A  +
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +  +++ G SP+VITYNTLID  CK  + ++A ++   M++ G  PD++TY  LI GL  
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           +  ++   +I  +++  G++  ++ +NIL+  LC  GK  +A+ +  +M   EK+   PN
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM--KEKKNCPPN 614

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
           +VTYN L+ G  + G ++ A  L   + E GL P+  +Y                  + +
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 516 EMMEKGFIPDI 526
           E++ +G IP +
Sbjct: 675 EVLSRGIIPTV 685



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 221/477 (46%), Gaps = 61/477 (12%)

Query: 80  PKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P IRS    L  FV+  +F+     F +LS                  A+ + + P+L  
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHG----------------AFGRRIAPNLQ- 159

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                           + N +LR+L   G  +    ++  ++RR++  +  +++ ++ GL
Sbjct: 160 ----------------TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGL 203

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA-DAVFKDMVENGI 255
            K  +L+ A D++++M   GV P VV YN L+ G  K G   K+ +  D + KD    G 
Sbjct: 204 AKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD---PGA 260

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN  T+N ++DG CK        +V+E M ++ +   V+TY  LI+GLC  G +D A  
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  E++ +GL  +    N+L+ GFC+   V++A   +D     GL  ++ TYN +I    
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLF 379

Query: 376 KEGRMEDAFAMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             G +++A  + + +  D   +PD  T+  LI GL + G       I  E   +G +  +
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            +Y+ ++  LC  G+   AV + +   KM+K+   PN   YN LI GFCQ  +  DA  +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYE---KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            +++ + G  P   TY                  V  EM+E GF PDI  +   I G
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 4/293 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L + G       +++E +    +L++ S++ ++NGLC  G+L  A  + E M   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P    YN LI G+C+   + +   A  ++  M +NG  P  +T+NTLIDG CK E   
Sbjct: 470 CKPNSHIYNALISGFCQ---VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQ 526

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  V  EM  +G    + TY SLI GL  D K+D+A+++  +++  GLK +V+  N LI
Sbjct: 527 EASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586

Query: 337 NGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +G C    V++A  +F D+ E+    P+++TYNTL+D   + G ++ A  +  S+ + G+
Sbjct: 587 HGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGL 646

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            PD+ +YN  I GL     +     +++E+++ G+   ++T+NILV A+ K G
Sbjct: 647 EPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 164/303 (54%), Gaps = 4/303 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++    L+    +N   +  F  F+ A   G +  V S + ++  L   G+  D   VY
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M +   + N   +N +++G C+  + + A  I   M   G SP V+TYN LIDG CK 
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               K  +A +V ++MVENG  P+  T+ +LI G   D+ I  A+ +++++   G+   V
Sbjct: 523 E---KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDV 579

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           + +N LI+GLC  GK+DEA+ +  +M       PN+VT N L++G  +   ++KA  L+ 
Sbjct: 580 MMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT 639

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            I+E GL P +I+YNT I   C   R+ +   + + +L RG++P V T+N L+  + + G
Sbjct: 640 SITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699

Query: 414 NVE 416
            ++
Sbjct: 700 PIQ 702



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 219/430 (50%), Gaps = 16/430 (3%)

Query: 66  TGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
            G +   +V     P + ++   +H   ++G     + ++  +      L  ++ + + L
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI--IKTGLVIDAAMYNSL 340

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  + +  +    ++ +  AG  GL++ + + N +++ L   G  ++   ++ ++  + +
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIELW-DLLEKDV 398

Query: 183 ELNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               D+  F  +++GLC+ G  NKA  I E+ +  G    V +Y+ +I+G C    +G++
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN---VGRL 455

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A  V++ M ++G  PN   +N LI GFC+    S A++++ +M  +G +  V+TYN+L
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+GLC   K  EA ++  EM+ +G  P++ T  +LI G    K ++ A  ++  I  +GL
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVR 419
              V+ +N LI   C  G++++A  + + M ++    P++ TYN L+ GL   G ++   
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +   +  +G+   +++YN  +  LC   +  + + LLDE+         P ++T+N+L+
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS---RGIIPTVITWNILV 692

Query: 480 KGFCQKGKLE 489
           +   + G ++
Sbjct: 693 RAVIKYGPIQ 702



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 18/353 (5%)

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGI 237
           R R   +  +   VL+   +A   + A D    + S LG +P + ++N L+D + +    
Sbjct: 76  RHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRAR-- 133

Query: 238 GKMYKADAVFKDMVENG----ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            +   ADA F  +        I PN  T+N ++   C   ++  A+ +F+ +    +A  
Sbjct: 134 -RFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD 192

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            +TY++L+ GL    +LD A+ L DEM  SG++P+VV  NAL+ G  K    EK   ++D
Sbjct: 193 CITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWD 252

Query: 354 D-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + + G  P++ TYN ++D  CK GR ++   +   M+   + PDV TY  LI GL R 
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-FKMEKEKKWPN 471
           G+V+G   + +E++  G+      YN LV   C+ G+ ++A    D   F   +     N
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-----N 367

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGL--IPNQTTYQIVREEMMEKGF 522
           + TYN++IKG    G +++A  L  +LLEK +  IP+  T+  +   + + GF
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGF 419



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 135/266 (50%), Gaps = 9/266 (3%)

Query: 264 TLIDGFCKDENISAAMKVFEEMGS-HGIAAGVVTYNSLINGLCVDGKLDEA----VALRD 318
            ++  F +     AA+  F  + S  G   G+ ++N+L++      +  +A     +L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
                 + PN+ T N ++   C +  +++A  LFD +  + ++P  ITY+TL+    K+ 
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTY 437
           R++ A  + + M   GV PDV  YN L+ G  + G  E V  + ++LV + G R  L TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N+++  LCK G+ K+   + + M     +   P+++TY +LI G C+ G ++ A  + +E
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQ---PDVITYGILIHGLCRSGDVDGAARVYSE 324

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFI 523
           +++ GL+ +   Y  + +   + G +
Sbjct: 325 IIKTGLVIDAAMYNSLVKGFCQAGRV 350



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 57/246 (23%)

Query: 60  SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII 119
           S +++    L+  L  A+KY +  S     V+NG    ++T                   
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT------------------- 546

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                                    YG          L+R L  + K +D   ++K++  
Sbjct: 547 -------------------------YG---------SLIRGLFSDKKIDDALSIWKQILY 572

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGIG 238
           + +++++   N +++GLC AGK+++A  +  DMK      P +VTYN L+DG  + G I 
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              KA  ++  + E+G+ P+ +++NT I G C  + I   +++ +E+ S GI   V+T+N
Sbjct: 633 ---KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 299 SLINGL 304
            L+  +
Sbjct: 690 ILVRAV 695


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 249/505 (49%), Gaps = 63/505 (12%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSV--STIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +H LV A+   +  S L      G   S   S++   +S C  +   N   +D+L+ AYV
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPT---NLFSVDLLVNAYV 171

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  K      A     + G K+S+ SCN +L ALV   K E V    KE   R+  L++ 
Sbjct: 172 KEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVT 231

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           + N VLN LC  GKL+KA  +++ MK+  + P  VTYN +++ Y KK   G+   A  + 
Sbjct: 232 TCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK---GRCKSALRIL 287

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            DM +NGI  +  T+N +ID  CK +  + A  + + M    +     +YN+LI+G   +
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFD---------DISE 357
           GK++ A+ + ++M+   LKP+V T  ALI+G+C+    ++A RVL++         ++S+
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 358 ----------QGLSPSVITY-------------------------------NTLIDAYCK 376
                      G+ P VITY                               N +ID+YC+
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 467

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G + +AF++ ++M+  G  PD+ TY  L+ GL + G++   +  M  L+         T
Sbjct: 468 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 527

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
            N L+  +CK G   +A+ L +   KM      P+  TY +L+ GFC++GK+  A  LL 
Sbjct: 528 LNTLLVGICKHGTLDEALDLCE---KMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 584

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
            +LEKGL+P+   Y  +   ++ +G
Sbjct: 585 MMLEKGLVPDTIAYTCLLNGLVNEG 609



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 215/439 (48%), Gaps = 11/439 (2%)

Query: 100 TIFHALSTCSDSLCRN----SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
           T+  AL  C   + RN    +    +L+  + K  K        +   + GL    ++  
Sbjct: 540 TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYT 599

Query: 156 QLLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            LL  LV EG+ +   Y+++E+  +  +  +  ++N ++NG  K G++N+   +M +M  
Sbjct: 600 CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 659

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V P   +YNIL+ GY KKG + +      +++DMV+ GI P+ VT+  LI G C+   
Sbjct: 660 NEVYPSSASYNILMHGYIKKGQLSRTL---YLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 716

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A+K  E+M   G+    + ++ LI       K+  A+ L   M    + P+  T  A
Sbjct: 717 IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVA 776

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           ++NG  +K  ++++  +  D+ E GL P    Y  LI+A C+ G ++ AF ++  M   G
Sbjct: 777 MVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 836

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V+P     + ++ GL + G VE    + + ++  GM   + T+  L+  LCK+ K   A 
Sbjct: 837 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 896

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L      ME      ++VTYNVLI G C K  + DA  L  E+  KGL+PN TTY  + 
Sbjct: 897 HLKQ---LMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 953

Query: 515 EEMMEKGFIPDIEGHMYNI 533
             M   G + D E  + +I
Sbjct: 954 GAMYATGTMQDGEKLLKDI 972



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 221/463 (47%), Gaps = 37/463 (7%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + L+ +VK G+  S   I   +        L   +I+ID L     K  +    +   KR
Sbjct: 269 TILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL----CKLKRSARAYLLLKR 324

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             +  L     S N L+     EGK     Y++ +M R+ ++ ++ ++  +++G C+ G+
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384

Query: 202 LNKASDIMEDMKSLGVSPK--------------------VVTYNILIDGYCKKGGIGKMY 241
            ++A  ++ +M+  GV P+                    V+TY+ LI+        G + 
Sbjct: 385 TDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINE-------GMIA 437

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A+   + M    I  +  +FN +ID +C+  N+  A  V++ M  HG    + TY SL+
Sbjct: 438 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 497

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            GLC  G L +A      ++      +  T N L+ G CK   +++A  L + +  + + 
Sbjct: 498 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 557

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P   TY  L+D +CK G++  A  +   ML++G++PD   Y CL+ GL  EG V+    +
Sbjct: 558 PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 617

Query: 422 MNELV-NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
             E++   G+ A  + YN ++    K G+  +   L   M  M + + +P+  +YN+L+ 
Sbjct: 618 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERL---MRNMHENEVYPSSASYNILMH 674

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G+ +KG+L     L  +++++G+ P+  TY+++   + E G I
Sbjct: 675 GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 717



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 192/361 (53%), Gaps = 6/361 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL +  ++ N ++   +K G+  ++E + + M    +  +  S+N +++G  K G+L++ 
Sbjct: 626 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 685

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  DM   G+ P  VTY +LI G C+ G I    K     + MV  G+ P+ + F+ L
Sbjct: 686 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK---FLEKMVLEGVFPDNLAFDIL 742

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F +   +S A+++F  M    ++    TY +++NGL     L ++  +  +M+ SGL
Sbjct: 743 IKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGL 802

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P      ALIN  C+   ++ A  L +D+   G+ PS +  ++++   CK G++E+A  
Sbjct: 803 QPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 862

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + +S++  G++P ++T+  L+ GL +E  ++   ++   + + G++  +VTYN+L+  LC
Sbjct: 863 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 922

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                  A+ L +EM   + +   PNI TY  L       G ++D   LL ++ ++G++P
Sbjct: 923 NKKCICDALDLYEEM---KSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979

Query: 506 N 506
           +
Sbjct: 980 S 980



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 187/376 (49%), Gaps = 4/376 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+  V  G+  + S +F  +  C + L  + I  + +M  Y+K  + +      +   +
Sbjct: 601 LLNGLVNEGQVKAASYMFQEI-ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 659

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
             +  S  S N L+   +K+G+     Y+Y++M +  I+ +  ++  ++ GLC+ G +  
Sbjct: 660 NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEI 719

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A   +E M   GV P  + ++ILI  + +K    KM  A  +F  M    + P+  T+  
Sbjct: 720 AVKFLEKMVLEGVFPDNLAFDILIKAFSEKS---KMSNALQLFSYMKWLHMSPSSKTYVA 776

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +++G  +   +  + ++  +M   G+      Y +LIN  C  G +D A  L+++M A G
Sbjct: 777 MVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 836

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+ V  ++++ G CK   VE+A ++F  I   G+ P++ T+ TL+   CKE +++DAF
Sbjct: 837 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 896

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            ++  M   G+  DV TYN LI GL  +  +    ++  E+ + G+   + TY  L GA+
Sbjct: 897 HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 956

Query: 445 CKDGKSKKAVSLLDEM 460
              G  +    LL ++
Sbjct: 957 YATGTMQDGEKLLKDI 972



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 172/333 (51%), Gaps = 8/333 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL+ ++   + YP   S+   +H ++K G+ +   T++       + +  +++   +L+ 
Sbjct: 652 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSR--TLYLYRDMVKEGIKPDNVTYRLLIF 709

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
              +     +  +  ++    G+    L+ + L++A  ++ K  +   ++  MK   +  
Sbjct: 710 GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSP 769

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++  ++NGL +   L ++ +I+ DM   G+ PK   Y  LI+  C+ G I   ++  
Sbjct: 770 SSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELK 829

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              +DM   G++P+EV  ++++ G CK   +  A+ VF  +   G+   + T+ +L++GL
Sbjct: 830 ---EDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGL 886

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + K+D+A  L+  M + GLK +VVT N LI G C KK +  A  L++++  +GL P++
Sbjct: 887 CKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNI 946

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            TY TL  A    G M+D   +   + DRG++P
Sbjct: 947 TTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 9/276 (3%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            +++  D+L+ A+ +  K     + F       +  S  +   ++  L+++   +    + 
Sbjct: 735  DNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEIL 794

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             +M    ++     +  ++N  C+ G ++ A ++ EDMK+LGV P  V  + ++ G CK 
Sbjct: 795  HDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK- 853

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               GK+ +A  VF  ++  G++P   TF TL+ G CK+  I  A  + + M S G+   V
Sbjct: 854  --CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 911

Query: 295  VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            VTYN LI GLC    + +A+ L +EM + GL PN+ T   L         ++    L  D
Sbjct: 912  VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKD 971

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            I ++G+ PS     +L      E RME+A    N++
Sbjct: 972  IEDRGIVPSYKHPESL------EWRMENAIKRLNTI 1001


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 222/427 (51%), Gaps = 36/427 (8%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ ++  Y+K       F  F  A + GL ++V + N LL  L KEGK  +   ++ E+ 
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
            + I  N+ S+N ++ G C+   +N A  + ++M   G +P  VT+ IL+DGY KKG I 
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+ ++   +F   V  G +P  + +NT+I
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGF K+ NI+ A  V+ EM   GI    VTY SLI+G C    +D A+ L ++M   GLK
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++     LI+GFCK++ ++ A  L +++   GLSP+   YN++I  +     +E+A  +
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M++ G+  D+ TY  LI GL + G +    +I  E+++ G+      + +L+  LC 
Sbjct: 635 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 694

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+ + A  +L++M     +   P+++ YN LI G  ++G L++A  L +E+L++GL+P+
Sbjct: 695 KGQFENARKILEDM---NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751

Query: 507 QTTYQIV 513
             TY I+
Sbjct: 752 NITYDIL 758



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 232/493 (47%), Gaps = 60/493 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  +   G   S   + + +S     L  N +   +L+    KN      FE +    
Sbjct: 268 SLMKGYCMQGNLRSALVLVNEIS--ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 325

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++SSV S N +L   +K   +++   ++ +     +  N+ +FN +L+ LCK GK+N
Sbjct: 326 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMN 384

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A ++ +++ + G+SP VV+YN +I G+C+K  I    K   V+K+M++NG  PN VTF 
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK---VYKEMLDNGFTPNAVTFT 441

Query: 264 TLIDGFCKDENISAAMKVFEEMG-----------------------------------SH 288
            L+DG+ K  +I  A  +F  M                                    S 
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 501

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G     + YN++I+G   +G ++ A  +  EM   G+ P+ VT  +LI+GFCK   ++ A
Sbjct: 502 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 561

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L +D+  +GL   +  Y TLID +CK   M+ A  + N +   G+ P+   YN +I G
Sbjct: 562 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 621

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
                NVE   ++  ++VN G+   L TY  L+  L K G+   A  +  EM     +  
Sbjct: 622 FKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS---KGI 678

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------------- 513
            P+   + VLI G C KG+ E+A  +L ++  K +IP+   Y  +               
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 514 -REEMMEKGFIPD 525
             +EM+++G +PD
Sbjct: 739 LHDEMLDRGLVPD 751



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 195/398 (48%), Gaps = 8/398 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    K GK      ++  +   +  +  N +  + ++L + +    +   + +K   
Sbjct: 372 TLLSWLCKEGKMNEACNLWDEV--IAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   + ++   L+    K+G  E+   ++  MK   I     +   ++ GLCKAG+  
Sbjct: 430 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 489

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +  D+     S G  P  + YN +IDG+ K+G I     A  V+++M E GI P+ VT+ 
Sbjct: 490 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINL---ASNVYREMCEVGITPSTVTYT 546

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LIDGFCK  NI  A+K+  +M   G+   +  Y +LI+G C    +  A  L +E+  +
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL PN    N++I GF     VE+A  L+  +  +G+   + TY +LID   K GR+  A
Sbjct: 607 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 666

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   ML +G+LPD   +  LI GL  +G  E  R I+ ++    M   ++ YN L+  
Sbjct: 667 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             K+G  ++A  L DEM         P+ +TY++L+ G
Sbjct: 727 HFKEGNLQEAFRLHDEML---DRGLVPDNITYDILVNG 761



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 199/390 (51%), Gaps = 42/390 (10%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
            ++ A VKEG   +   +  +M      +NL     ++ G C  G L  A  ++ ++   
Sbjct: 233 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 292

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P  VTY++LIDG CK G I K ++    + +M   GI  +  + N++++G+ K ++ 
Sbjct: 293 GLVPNKVTYSVLIDGCCKNGNIEKAFE---FYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  +F +    G+ A V T+N+L++ LC +GK++EA  L DE++A G+ PNVV+ N +
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G C+K  +  A  ++ ++ + G +P+ +T+  L+D Y K+G +E+AF++ + M D  +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 396 LPDVST-----------------------------------YNCLIAGLSREGNVEGVRN 420
           LP  +T                                   YN +I G  +EGN+    N
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +  E+   G+    VTY  L+   CK      A+ LL++   M+++    +I  Y  LI 
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND---MKRKGLKMDIKAYGTLID 585

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           GFC++  ++ A+ LLNEL   GL PN+  Y
Sbjct: 586 GFCKRRDMKSAHELLNELRGAGLSPNRFIY 615



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 176/333 (52%), Gaps = 9/333 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +NF L+   + G + +A       K+ GV      Y+I +   C K   G    A ++ +
Sbjct: 163 YNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGY---ALSLLR 217

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G +P E TF ++I    K+ N++ A+++ ++M + G +  +    SL+ G C+ G
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            L  A+ L +E+  SGL PN VT + LI+G CK   +EKA   + ++  +G+  SV + N
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           ++++ Y K    ++AF M N  L+ G L +V T+N L++ L +EG +    N+ +E++  
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 396

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   +V+YN ++   C+      A  +  EM         PN VT+ +L+ G+ +KG +
Sbjct: 397 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLD---NGFTPNAVTFTILMDGYFKKGDI 453

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           E+A  + + + +  ++P  TT  I+ + + + G
Sbjct: 454 ENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 153/290 (52%), Gaps = 7/290 (2%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G + +A+  F      G+  ++  ++  +   C   N   A+ +  EM + G      T+
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            S+I     +G + EA+ L+D+M+  G   N+  + +L+ G+C +  +  A VL ++ISE
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            GL P+ +TY+ LID  CK G +E AF   + M  +G+   V + N ++ G  +  + + 
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              + N+ + +G+ A + T+N L+  LCK+GK  +A +L DE+     +   PN+V+YN 
Sbjct: 352 AFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGISPNVVSYNN 407

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +I G C+K  +  A  +  E+L+ G  PN  T+ I+ +   +KG   DIE
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG---DIE 454



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 45/80 (56%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L  +G+FE+   + ++M  + +  ++  +N ++ G  K G L +A  + ++M   G
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747

Query: 217 VSPKVVTYNILIDGYCKKGG 236
           + P  +TY+IL++G  K  G
Sbjct: 748 LVPDNITYDILVNGKFKGDG 767


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 234/467 (50%), Gaps = 24/467 (5%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
            L    S++   +LL S++  K YP + S        G             T   SL   
Sbjct: 48  HLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKG-------------TPKPSLVTL 94

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI I+ L   ++  M   L F    +    G      +   L++ L  +G+  +   +Y 
Sbjct: 95  SIFINSL--THLGQMG--LAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYD 150

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
               +    +   +  ++NGLCK GK   A +++  M+  GV P ++ YN+++DG CK+G
Sbjct: 151 HAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEG 210

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGV 294
            +    +A  +  +MV  GI  +  T+N+LI GFC       A+++  EM     +   V
Sbjct: 211 LV---TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            T+N L++ LC  G + EA  +   M+  GL+P+VV+ NAL+NG+C +  + +A+ +FD 
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+G  P+VI+Y+TLI+ YCK   +++A  +   M  R ++PD  TYNCL+ GLS+ G 
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V    +++  +  +G    L+TYN+L+    K     KA++L   +         PNI T
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGIS---PNIRT 444

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           YN+LI G C+ G+++ A  +   L  KG  PN  TY I+   +  +G
Sbjct: 445 YNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 175/300 (58%), Gaps = 4/300 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G+   V + N L+      G+F+    +  EM  +  +  ++ +FN +++ LCK G + +
Sbjct: 226 GICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAE 285

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++   M   G+ P VV+ N L++G+C +G    M +A  VF  MVE G LPN ++++T
Sbjct: 286 ARNVFGLMIKRGLEPDVVSCNALMNGWCLRGC---MSEAKEVFDRMVERGKLPNVISYST 342

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+G+CK + +  A+++  EM    +    VTYN L++GL   G++     L + M ASG
Sbjct: 343 LINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASG 402

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+++T N L++ + K++ ++KA  LF  I + G+SP++ TYN LID  CK GRM+ A 
Sbjct: 403 QAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAK 462

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   +  +G  P++ TYN +I GL REG ++    ++ E+V++G     VT++ LV AL
Sbjct: 463 EIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 209/403 (51%), Gaps = 22/403 (5%)

Query: 90  VKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           +K   F +++   HA+S     D +C  ++I  +  +   ++       E  ++    G+
Sbjct: 138 LKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRD-----AIELLRKMEKGGV 192

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +++  N ++  L KEG   +   +  EM  + I +++ ++N +++G C AG+   A  
Sbjct: 193 RPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVR 252

Query: 208 IMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++ +M     V P V T+NIL+D  CK   +G + +A  VF  M++ G+ P+ V+ N L+
Sbjct: 253 LLNEMVMKEDVRPDVYTFNILVDALCK---LGMVAEARNVFGLMIKRGLEPDVVSCNALM 309

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+C    +S A +VF+ M   G    V++Y++LING C    +DEA+ L  EM    L 
Sbjct: 310 NGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT N L++G  K   V     L + +   G +P +ITYN L+D Y K   ++ A A+
Sbjct: 370 PDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALAL 429

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              ++D G+ P++ TYN LI GL + G ++  + I   L   G R  + TYNI++  L +
Sbjct: 430 FQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489

Query: 447 DG----KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           +G         + ++D+ F        PN VT++ L++   +K
Sbjct: 490 EGLLDEAEALLLEMVDDGFP-------PNAVTFDPLVRALLEK 525



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 8/365 (2%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           + L K   F+D    +  M       ++ S N +L+ + K         +   + S G  
Sbjct: 28  KTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP 87

Query: 219 -PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P +VT +I I+       +G+M  A +V   +V+ G   +  T  TL+ G C       
Sbjct: 88  KPSLVTLSIFINSLTH---LGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFE 144

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ +++   S G +   V Y +LINGLC  GK  +A+ L  +M   G++PN++  N +++
Sbjct: 145 ALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVD 204

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM-LDRGVL 396
           G CK+ LV +A  L  ++  +G+   V TYN+LI  +C  G+ + A  + N M +   V 
Sbjct: 205 GLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR 264

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV T+N L+  L + G V   RN+   ++  G+   +V+ N L+   C  G   +A  +
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV 324

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            D   +M +  K PN+++Y+ LI G+C+   +++A  LL E+ ++ L+P+  TY  + + 
Sbjct: 325 FD---RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDG 381

Query: 517 MMEKG 521
           + + G
Sbjct: 382 LSKSG 386



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 39/220 (17%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS-PSVITYN 368
            D+AV+    M+     P++V+ N L++   K K       L   +  +G   PS++T +
Sbjct: 36  FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLS 95

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
             I++    G+M  AF++   ++ RG   D  T   L+ GL  +G      N+ +  V+ 
Sbjct: 96  IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G                            DE             V Y  LI G C+ GK 
Sbjct: 156 GFS-------------------------FDE-------------VCYGTLINGLCKMGKT 177

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            DA  LL ++ + G+ PN   Y +V + + ++G + +  G
Sbjct: 178 RDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACG 217


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G +   ++   L+  L    K  +   +   M +R  + NL ++  V+NGLCK G ++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVT 261
            A +++  M++  +   VV Y+ +ID  CK       ++ DA+  F +M   G+ PN +T
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKY-----RHEDDALNLFTEMENKGVRPNVIT 297

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +++LI   C  E  S A ++  +M    I   VVT+N+LI+    +GKL EA  L DEM+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + P++ T ++LINGFC    +++A+ +F+ +  +   P+V+TYNTLI+ +CK  R++
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +   +   M  RG++ +  TY  LI G  +  + +  + +  ++V++G+   ++TYN L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK+GK +KA+ + +    +++ K  P I TYN++I+G C+ GK+ED   L   L  K
Sbjct: 478 DGLCKNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534

Query: 502 GLIPNQTTYQIVREEMMEKGF 522
           G+ P+   Y  +      KG 
Sbjct: 535 GVKPDVIIYNTMISGFCRKGL 555



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 202/364 (55%), Gaps = 6/364 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + ++++   ++  L K G  +    +  +M+  +IE N+  ++ V++ LCK    + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M++ GV P V+TY+ LI   C      +   A  +  DM+E  I PN VTFN L
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCN---YERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID F K+  +  A K+++EM    I   + TY+SLING C+  +LDEA  + + M++   
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT N LINGFCK K +++   LF ++S++GL  + +TY TLI  + +    ++A  
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  GV P++ TYN L+ GL + G +E    +   L  + M   + TYNI++  +C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK +    L      +  +   P+++ YN +I GFC+KG  E+A+ L  ++ E G +P
Sbjct: 517 KAGKVEDGWDLF---CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573

Query: 506 NQTT 509
           +  T
Sbjct: 574 DSGT 577



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 208/393 (52%), Gaps = 22/393 (5%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+   N+LL A+ K  KF+ V  + ++M+R  I  NL ++N ++N  C+  +++ A  ++
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT + L++GYC    I     A A+   MVE G  P+ +TF TLI G 
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 200

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                 S A+ + + M   G    +VTY  ++NGLC  G +D A  L ++M A+ ++ NV
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  + +I+  CK +  + A  LF ++  +G+ P+VITY++LI   C   R  DA  + + 
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++R + P+V T+N LI    +EG +     + +E++   +   + TY+ L+   C   +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  + + M     +  +PN+VTYN LI GFC+  ++++   L  E+ ++GL+ N  T
Sbjct: 381 LDEAKHMFELMI---SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437

Query: 510 Y----------------QIVREEMMEKGFIPDI 526
           Y                Q+V ++M+  G  P+I
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 200/369 (54%), Gaps = 15/369 (4%)

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           +GDY          ++LR  +   K +D   ++  M + R   ++  FN +L+ + K  K
Sbjct: 50  SGDY---------REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK 100

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
            +    + E M+ LG+S  + TYNILI+ +C++  I     A A+   M++ G  P+ VT
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS---LALALLGKMMKLGYEPSIVT 157

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
            ++L++G+C  + IS A+ + ++M   G     +T+ +LI+GL +  K  EAVAL D M+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G +PN+VT   ++NG CK+  ++ A  L + +    +  +V+ Y+T+ID+ CK    +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M ++GV P+V TY+ LI+ L           ++++++   +   +VT+N L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            A  K+GK  +A  L DEM K   +   P+I TY+ LI GFC   +L++A  +   ++ K
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394

Query: 502 GLIPNQTTY 510
              PN  TY
Sbjct: 395 DCFPNVVTY 403



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 162/296 (54%), Gaps = 5/296 (1%)

Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           + G+  M   DA+  F  MV++  LP+   FN L+    K +     + + E+M   GI+
Sbjct: 58  RNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + TYN LIN  C   ++  A+AL  +MM  G +P++VT ++L+NG+C  K +  A  L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D + E G  P  IT+ TLI       +  +A A+ + M+ RG  P++ TY  ++ GL +
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G+++   N++N++    + A +V Y+ ++ +LCK      A++L  E   ME +   PN
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE---MENKGVRPN 294

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++TY+ LI   C   +  DA+ LL++++E+ + PN  T+  + +  +++G + + E
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 9/205 (4%)

Query: 61  HSLLLTGRLLHSLVVAKK-YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           H  L   + +  L+++K  +P + ++   ++ F K  +      +F  +S     L  N+
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNT 435

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +    L+  + +          FK+    G+  ++++ N LL  L K GK E    V++ 
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           ++R ++E  + ++N ++ G+CKAGK+    D+   +   GV P V+ YN +I G+C+K  
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK-- 553

Query: 237 IGKMYKADAVFKDMVENGILPNEVT 261
            G   +ADA+F+ M E+G LP+  T
Sbjct: 554 -GLKEEADALFRKMREDGPLPDSGT 577


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/316 (37%), Positives = 184/316 (58%), Gaps = 3/316 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   + + N L+ AL    +++ V  +  EM + +I  N+ S N V++ LCK GK+ +A
Sbjct: 191 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+++ M   GV P VVTY  L+DG+C +    +M +A  VF  MV NG + N V++NTL
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRS---EMDEAVKVFDMMVRNGCVCNVVSYNTL 307

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+CK + I  AM +FEEM    +    +TY++LI+GLC  G+L +A+AL +EM+A G 
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+VT + L++  CK   + +A  L   I    L P V  YN  ID  C+ G +E A  
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + +++  RG+ PDV T+N +I GL + G ++    +  E+  NG      TYN +   L 
Sbjct: 428 LFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487

Query: 446 KDGKSKKAVSLLDEMF 461
           ++ K+ +A+ LL+EM 
Sbjct: 488 QNNKTSRAIQLLEEML 503



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 212/424 (50%), Gaps = 41/424 (9%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R         +    +LL ++ K   +  V  + K+M    I  ++ +   V+N
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   +++ A  ++  +  LG  P   T+  L+ G C  G IG+   A  VF  MV  G
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE---ALDVFDKMVGEG 156

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC--------- 305
             PN VT+ TL++G CKD  ++ A+ +F EM + GI+  + TYNSLI+ LC         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 306 ---------------------VD-----GKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
                                VD     GK+ EA  + D M+  G++P+VVT  AL++G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C +  +++A  +FD +   G   +V++YNTLI+ YCK  R++ A  +   M  + ++P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TY+ LI GL   G ++    + NE+V  G    LVTY+IL+  LCK+ +  +A++LL  
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLK- 395

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
              +E     P++  YN+ I G C+ G LE A  L + L  +GL P+  T+ I+   + +
Sbjct: 396 --AIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453

Query: 520 KGFI 523
           +G +
Sbjct: 454 RGLL 457



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 209/388 (53%), Gaps = 6/388 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F +    G + +V++   L+  L K+ +  +   ++ EM  + I  ++ ++N +++
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC   +    + ++ +M    + P VV+ NI++D  CK+   GK+ +A  V   M++ G
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE---GKVTEAHDVVDMMIQGG 261

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+  L+DG C    +  A+KVF+ M  +G    VV+YN+LING C   ++D+A+
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM    L PN +T + LI+G C    ++ A  LF+++   G  P+++TY+ L+D  
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  R+ +A A+  ++    + PDV  YN  I G+ R G++E  R++ + L   G++  +
Sbjct: 382 CKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDV 441

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            T+NI++  LCK G   +A  L  E   M++     N  TYN + +G  Q  K   A  L
Sbjct: 442 WTHNIMIRGLCKRGLLDEASKLFRE---MDENGCLRNGCTYNTITQGLLQNNKTSRAIQL 498

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGF 522
           L E+L +G   + +T  ++ + + + G 
Sbjct: 499 LEEMLARGFSADVSTTALLVKMLSDDGL 526



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 3/212 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD+A++    M+     P +     L+    K K       L   +   G+ P V T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +I+++C   R++ A ++   +L  G  PD +T+  L+ GL   G +    ++ +++V  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY  L+  LCKD +  +A++L  EM     +   P+I TYN LI   C   + +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI---AKGISPDIFTYNSLIHALCNLCEWK 213

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               LLNE+++  ++PN  +  IV + + ++G
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEG 245


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 226/431 (52%), Gaps = 50/431 (11%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G + ++ + N +L  L K G+F++V  V++ M    ++ ++ ++  +++GLC++G ++
Sbjct: 257 DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVD 316

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------ADAVFK 248
            A+ +  ++   G+      YN L+ G+C+ G + + +K                + + K
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376

Query: 249 DMVENGI-----------------LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            + ++G+                 +P+ VTF TLI G C++   + A  +FEE    G  
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V +Y+S+INGLC  G+L +AV + ++M   G KPN    NALI+GFC+      A  +
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +  +++ G SP+VITYNTLID  CK  + ++A ++   M++ G  PD++TY  LI GL  
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           +  ++   +I  +++  G++  ++ +NIL+  LC  GK  +A+ +  +M   EK+   PN
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM--KEKKNCPPN 614

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
           +VTYN L+ G  + G ++ A  L   + E GL P+  +Y                  + +
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 516 EMMEKGFIPDI 526
           E++ +G IP +
Sbjct: 675 EVLSRGIIPTV 685



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 220/477 (46%), Gaps = 61/477 (12%)

Query: 80  PKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P IRS    L  FV+  +F+     F +LS                  A+ + + P+L  
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHG----------------AFGRRIAPNLQ- 159

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                           + N +LR+L   G  +    ++  ++RR++  +  +++ ++ GL
Sbjct: 160 ----------------TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGL 203

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA-DAVFKDMVENGI 255
            K  +L+ A D++++M    V P VV YN L+ G  K G   K+ +  D + KD    G 
Sbjct: 204 AKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD---PGA 260

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN  T+N ++DG CK        +V+E M ++ +   V+TY  LI+GLC  G +D A  
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  E++ +GL  +    N+L+ GFC+   V++A   +D     GL  ++ TYN +I    
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLF 379

Query: 376 KEGRMEDAFAMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             G +++A  + + +  D   +PD  T+  LI GL + G       I  E   +G +  +
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            +Y+ ++  LC  G+   AV + +   KM+K+   PN   YN LI GFCQ  +  DA  +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYE---KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            +++ + G  P   TY                  V  EM+E GF PDI  +   I G
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 4/293 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L + G       +++E +    +L++ S++ ++NGLC  G+L  A  + E M   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P    YN LI G+C+   + +   A  ++  M +NG  P  +T+NTLIDG CK E   
Sbjct: 470 CKPNSHIYNALISGFCQ---VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQ 526

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  V  EM  +G    + TY SLI GL  D K+D+A+++  +++  GLK +V+  N LI
Sbjct: 527 EASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586

Query: 337 NGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +G C    V++A  +F D+ E+    P+++TYNTL+D   + G ++ A  +  S+ + G+
Sbjct: 587 HGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGL 646

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            PD+ +YN  I GL     +     +++E+++ G+   ++T+NILV A+ K G
Sbjct: 647 EPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 164/303 (54%), Gaps = 4/303 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++    L+    +N   +  F  F+ A   G +  V S + ++  L   G+  D   VY
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M +   + N   +N +++G C+  + + A  I   M   G SP V+TYN LIDG CK 
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               K  +A +V ++MVENG  P+  T+ +LI G   D+ I  A+ +++++   G+   V
Sbjct: 523 E---KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDV 579

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           + +N LI+GLC  GK+DEA+ +  +M       PN+VT N L++G  +   ++KA  L+ 
Sbjct: 580 MMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT 639

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            I+E GL P +I+YNT I   C   R+ +   + + +L RG++P V T+N L+  + + G
Sbjct: 640 SITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699

Query: 414 NVE 416
            ++
Sbjct: 700 PIQ 702



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 219/429 (51%), Gaps = 16/429 (3%)

Query: 67  GRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
           G +   +V     P + ++   +H   ++G     + ++  +      L  ++ + + L+
Sbjct: 284 GEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI--IKTGLVIDAAMYNSLV 341

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +    ++ +  AG  GL++ + + N +++ L   G  ++   ++ ++  + + 
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVA 399

Query: 184 LNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              D+  F  +++GLC+ G  NKA  I E+ +  G    V +Y+ +I+G C    +G++ 
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN---VGRLV 456

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  V++ M ++G  PN   +N LI GFC+    S A++++ +M  +G +  V+TYN+LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC   K  EA ++  EM+ +G  P++ T  +LI G    K ++ A  ++  I  +GL 
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRN 420
             V+ +N LI   C  G++++A  + + M ++    P++ TYN L+ GL   G ++    
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +   +  +G+   +++YN  +  LC   +  + + LLDE+         P ++T+N+L++
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS---RGIIPTVITWNILVR 693

Query: 481 GFCQKGKLE 489
              + G ++
Sbjct: 694 AVIKYGPIQ 702



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 18/340 (5%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           VL+   +A   + A D    + S LG +P + ++N L+D + +     +   ADA F  +
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRAR---RFSDADAFFASL 145

Query: 251 VENG----ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                   I PN  T+N ++   C   ++  A+ +F+ +    +A   +TY++L+ GL  
Sbjct: 146 SHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAK 205

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVI 365
             +LD A+ L DEM  S ++P+VV  NAL+ G  K    EK   ++D  + + G  P++ 
Sbjct: 206 QDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLA 265

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TYN ++D  CK GR ++   +   M+   + PDV TY  LI GL R G+V+G   + +E+
Sbjct: 266 TYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI 325

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-FKMEKEKKWPNIVTYNVLIKGFCQ 484
           +  G+      YN LV   C+ G+ ++A    D   F   +     N+ TYN++IKG   
Sbjct: 326 IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-----NLRTYNIMIKGLFD 380

Query: 485 KGKLEDANGLLNELLEKGL--IPNQTTYQIVREEMMEKGF 522
            G +++A  L  +LLEK +  IP+  T+  +   + + GF
Sbjct: 381 SGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGF 419



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 134/265 (50%), Gaps = 9/265 (3%)

Query: 265 LIDGFCKDENISAAMKVFEEMGS-HGIAAGVVTYNSLINGLCVDGKLDEA----VALRDE 319
           ++  F +     AA+  F  + S  G   G+ ++N+L++      +  +A     +L   
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG 148

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                + PN+ T N ++   C +  +++A  LFD +  + ++P  ITY+TL+    K+ R
Sbjct: 149 AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDR 208

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYN 438
           ++ A  + + M    V PDV  YN L+ G  + G  E V  + ++LV + G R  L TYN
Sbjct: 209 LDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++  LCK G+ K+   + + M     +   P+++TY +LI G C+ G ++ A  + +E+
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQ---PDVITYGILIHGLCRSGDVDGAARVYSEI 325

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFI 523
           ++ GL+ +   Y  + +   + G +
Sbjct: 326 IKTGLVIDAAMYNSLVKGFCQAGRV 350



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 57/246 (23%)

Query: 60  SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII 119
           S +++    L+  L  A+KY +  S     V+NG    ++T                   
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT------------------- 546

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                                    YG          L+R L  + K +D   ++K++  
Sbjct: 547 -------------------------YG---------SLIRGLFSDKKIDDALSIWKQILY 572

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGIG 238
           + +++++   N +++GLC AGK+++A  +  DMK      P +VTYN L+DG  + G I 
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              KA  ++  + E+G+ P+ +++NT I G C  + I   +++ +E+ S GI   V+T+N
Sbjct: 633 ---KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 299 SLINGL 304
            L+  +
Sbjct: 690 ILVRAV 695


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 211/398 (53%), Gaps = 35/398 (8%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N++L +LVK   +  V  + ++M+   I  N  +FN ++N  C+ G +  A  ++  +  
Sbjct: 72  NKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILK 131

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKM-----------YKADAVFKDMVENGILP------ 257
           +G  P ++T N  I G+C KG I +            +  D V    + NG+        
Sbjct: 132 MGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRA 191

Query: 258 ---------------NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
                          N V +NT+IDG  KD++++ A  ++ EM +  I+  VVTY++LI 
Sbjct: 192 ALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIR 251

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G  + GKL +A+ L ++M+   +KP+V T N L++GFCK+  ++KA+ + D +  Q + P
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V T+NTL+D +CK+ +M++   +   M+ +G+ P+V TY  L+ G      V   + I 
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           N +   G+ A + +YNI++   CK  K  KA+ L  EM     +   P++VTYN LI G 
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM---HHKHIIPDVVTYNSLIDGL 428

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           C+ GK+  A  L+NE+ ++G  PN  TY  +   ++ K
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK 466



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 196/356 (55%), Gaps = 18/356 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     +S   L+  L K G+      + + +  + ++LN   +N V++G+ K   +N A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M +  +SP VVTY+ LI G+     +GK+  A  +F  M+   I P+  TFN L
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFI---VGKLKDAIDLFNKMILENIKPDVYTFNIL 284

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DGFCK+  +  A  V + M    I   V T+N+L++G C D K+ E   +   MM  G+
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNVVT  +L++G+C  K V KA+ +F+ +S++G++ +V +YN +I+ +CK  +++ A  
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  + ++PDV TYN LI GL + G +     ++NE+ + G    ++TYN ++ AL 
Sbjct: 405 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL- 463

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
                         + K++ +   PN+ T  +LIKG CQ GKLE A  +  +LL K
Sbjct: 464 --------------LTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 164/292 (56%), Gaps = 15/292 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ +       +   V++ + L+R     GK +D   ++ +M    I+ ++ +FN +++
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK G+L KA ++++ M    + P V T+N L+DG+CK     KM +   VF  M++ G
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD---RKMKEGKTVFAMMMKQG 343

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I PN VT+ +L+DG+C  + ++ A K+F  M   G+ A V +YN +ING C   K+D+A+
Sbjct: 344 IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAM 403

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + P+VVT N+LI+G CK   +  A  L +++ ++G  P++ITYN++++  
Sbjct: 404 KLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN-- 461

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
                     A+   + D+G+ P++ T   LI GL + G +E  R +  +L+
Sbjct: 462 ----------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 38/303 (12%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++F  ++          FN ++    K ++    + + ++M   GI    VT+N LIN
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C  G +  A ++  +++  G +P+++T N  I GFC K  + +A    D +   G   
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 363 SVITYNTLIDAYCKEG-----------------------------------RMEDAFAMR 387
             ++Y TLI+  CK G                                    + DAF + 
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ + + PDV TY+ LI G    G ++   ++ N+++   ++  + T+NILV   CK+
Sbjct: 232 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+ KKA ++LD M  M ++ K PN+ T+N L+ GFC+  K+++   +   ++++G+ PN 
Sbjct: 292 GRLKKAKNVLDMM--MIQDIK-PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 508 TTY 510
            TY
Sbjct: 349 VTY 351



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 3/248 (1%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           ++  A+ +F  +           +N ++  L         ++L  +M   G+ PN VT N
Sbjct: 48  DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LIN FC+  L+  A  +   I + G  P +IT NT I  +C +G++  A    + ++  
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G   D  +Y  LI GL + G       ++  +    ++   V YN ++  + KD     A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L  EM     ++  P++VTY+ LI+GF   GKL+DA  L N+++ + + P+  T+ I+
Sbjct: 228 FDLYSEMV---AKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284

Query: 514 REEMMEKG 521
            +   ++G
Sbjct: 285 VDGFCKEG 292



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 15/198 (7%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + K+ K   G   F      G+K +V++   L+       +    + ++  M +R +  
Sbjct: 322 GFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTA 381

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ S+N ++NG CK  K++KA  +  +M    + P VVTYN LIDG CK G I   ++  
Sbjct: 382 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQ-- 439

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +  +M + G  PN +T+N++++             +  ++   GI   + T   LI GL
Sbjct: 440 -LVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGL 486

Query: 305 CVDGKLDEAVALRDEMMA 322
           C  GKL+ A  + ++++ 
Sbjct: 487 CQSGKLEAARKVFEDLLV 504


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 254/531 (47%), Gaps = 36/531 (6%)

Query: 8   TIEDITELIRNHHWSKLKNT---------DPNTVILQLFNSDADPVLILRYFCWSTKELR 58
           T+  I + I    W  L++          +P+ V+ ++ N   D    LR+F W+ K+  
Sbjct: 153 TVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVV-KVLNLQTDAQNALRFFQWADKQEG 211

Query: 59  ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII 118
             H+      ++  L  AK + +++S L      G+  + S                  +
Sbjct: 212 YDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRS------------------M 253

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL--SCNQLLRALVKEGKFEDVEYVYKE 176
           +   +++Y ++ +     EAF    + G +  ++  + N +L +LVK  K +  E ++ +
Sbjct: 254 LHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQ 313

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    +  N  ++  ++       K+  A  +++DM     +P VVTY I+I   CK+  
Sbjct: 314 MINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKM 373

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           I + Y    V + M ENG  PN  T+N LI G C       A+++   M   G+   + T
Sbjct: 374 IEQAY---GVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYT 430

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  L +GLC   +LD A  + +E +A GLKPN VT N L+NG+C+   + +A  +  ++ 
Sbjct: 431 YTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMH 490

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           +   +P  +TY TLI    +  ++ DA  M + M ++G   +  T N L  GL+R GN +
Sbjct: 491 QNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHK 550

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                   + + G       Y + +  L   G+ ++A +LL EM     +   PN+ TYN
Sbjct: 551 DASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMIN---KGYSPNLTTYN 607

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            +IKGFC++G+L+DA+ +LN ++E G+ P+  +Y I+ +E   +G   D +
Sbjct: 608 TMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDAD 658



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 24/387 (6%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV--TY 224
           F +++ + ++M+ +  E+     +  +    ++G+  ++ +    MK +G  P ++   Y
Sbjct: 232 FTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAY 291

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N ++    K     K+  A+ +F  M+ NG+  N +T+ ++I  F   E +  AMK+ ++
Sbjct: 292 NSVLVSLVKNK---KLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD 348

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  +  A  VVTY  +I+ LC    +++A  +  +M  +G +PN+ T NALI G C  + 
Sbjct: 349 MIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRR 408

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            E+A  L   + + G+ P++ TY  L    CK  R++ A  M N  L RG+ P+  TYN 
Sbjct: 409 PEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNT 468

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G  R   +    +I+ E+  N      VTY  L+  L +  +   A+ + DEM   E
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM---E 525

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------------- 510
            +    N  T N+L +G  + G  +DA+     + ++G   + + Y              
Sbjct: 526 NKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEME 585

Query: 511 --QIVREEMMEKGFIPDIEGHMYNISG 535
             Q +  EM+ KG+ P++  +   I G
Sbjct: 586 EAQALLYEMINKGYSPNLTTYNTMIKG 612



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 17/241 (7%)

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEM---MASGLKPNVVTSNALINGFCKKKLVEKA 348
           A VV     +N +C   + D+   L+D     MA  L P+ V     +    +  L    
Sbjct: 145 ALVVQQEDTVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNAL---- 200

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R       ++G   +   Y T+ID   +     +  ++   M  +G     S  +  +  
Sbjct: 201 RFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMS 260

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLV--TYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             R G  +      N +   G   GL+   YN ++ +L K+ K   A +L  +M      
Sbjct: 261 YGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMIN---N 317

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKG 521
               N +TY  +I+ F  K K+EDA  LL+++++    P+  TY IV     + +M+E+ 
Sbjct: 318 GVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQA 377

Query: 522 F 522
           +
Sbjct: 378 Y 378


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 206/372 (55%), Gaps = 10/372 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKR--RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           L+  L K  K ++ +   + M R       +  S+N +LN LCKA K+++A  I   M S
Sbjct: 90  LINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 149

Query: 215 -LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
              V P VV+Y+ILIDG+CK   I ++ +A+ ++K M++   +PN  T+N  ++G  +  
Sbjct: 150 ERSVVPDVVSYSILIDGFCK---IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 206

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            I+ A  V+EEM S G +  V+TY++LI+G  +  K D+A  L + M++ G +PN VT N
Sbjct: 207 RIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYN 266

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L++G CK+   ++A  LF  + E+G  P  +TY TL+  +C  G++E A  + + M+ +
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  PDV  YNCL+ G  R G     R +   +V+   +   V++NI++  L K  +   A
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA 386

Query: 454 VSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           V + +   +ME++    P++VTYN LI G C + +L +A  +  E+    L P+   + +
Sbjct: 387 VEVFE---RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV 443

Query: 513 VREEMMEKGFIP 524
           + E M   G  P
Sbjct: 444 LLEAMYAAGHKP 455



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 5/329 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+ +  K  K H  F  F     +  +   V+S + L+    K  +    E +YK+M   
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               N+ ++N  LNGL + G++  A  + E+M S G SP V+TY+ LI G+       K 
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF---SLARKH 243

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            +A  +F+ M+  G  PN VT+N L+ G CK+     A ++F +M   G     VTY +L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           + G C  GK+++AV + DEM++ G  P+VV  N L+ GF +     +AR LF  +  +  
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            P  +++N +ID   K  R++DA  +   M  D G  PD+ TYN LI GL  E  +    
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDG 448
            +  E+    +      +N+L+ A+   G
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 150/277 (54%), Gaps = 4/277 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           +K+  D     +V + N  L  L+++G+  D + VY+EM       ++ +++ +++G   
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A K ++A ++ E M S G  P  VTYN L+ G CK+    K  +A  +F+ MVE G  P+
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE---SKPDEAHELFRKMVERGCDPD 296

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           +VT+ TL+ GFC    I  A++VF+EM S G    VV YN L+ G    GK  EA  L  
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPSVITYNTLIDAYCKE 377
            M++   KP+ V+ N +I+G  K K ++ A  +F+ + +  G SP ++TYN+LI   C E
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            R+ +A  +   +    + PD   +N L+  +   G+
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 22/324 (6%)

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           V +   + G CK G I + ++A    ++ + +   P+  T +++I   CK   + +A+ +
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM--MASGLKPNVVTSNALINGF 339
            E M   G    + T++ LIN LC   K+ EA      M    S    +  + N+L+N  
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131

Query: 340 CKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           CK K V +A  +F   +SE+ + P V++Y+ LID +CK   +  A  +   M+D   +P+
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V+TYN  + GL R+G +   + +  E+++ G    ++TY+ L+       K  +A  L +
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFE 251

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI------ 512
            M         PN VTYN L+ G C++ K ++A+ L  +++E+G  P++ TY        
Sbjct: 252 AMI---SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 513 ----------VREEMMEKGFIPDI 526
                     V +EM+ KG  PD+
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDV 332



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 134/258 (51%), Gaps = 10/258 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +FL+  ++ G+      ++  +  + CS  +   S +I    LA  K+ + H  FEA   
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR-KHDQAHELFEAMI- 254

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G + + ++ N LL  L KE K ++   ++++M  R  + +  ++  +L G C  GK
Sbjct: 255 --SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           + +A ++ ++M S G  P VV YN L+ G+ + G  G   +A  +F+ MV     P+ V+
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG---EARQLFQVMVSRECKPDTVS 369

Query: 262 FNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            N +IDG  K + +  A++VFE M   HG +  +VTYNSLI GLC + +L EA+ +  E+
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 321 MASGLKPNVVTSNALING 338
               L P+    N L+  
Sbjct: 430 DRLKLSPDPHAFNVLLEA 447



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 52/102 (50%)

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V +   +G LCK GK ++A      M +     + P+  T + +I+  C+ G+++ A  L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           L  ++++G  P+  T+ ++  E+ +   I + +  +  ++ T
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 201/380 (52%), Gaps = 22/380 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K     G      + ++++  L    K E    +++EMK   +  ++ ++  +++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CKAG + +A  + E+M+S+G SP VVTY  LI  Y K   +    +A+ +F  MV+ G
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP---QANDIFHRMVDAG 388

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM----------------GSHGIAAGVVTYN 298
             PN+VT+  L+DG CK  NIS A +V+ ++                  H +A  VVTY 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++GLC   K+D A  L D M++SG +PN +  +ALI+GFCK   ++ A+ +F  +++ 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  PSV TY +LID   K+GR++ A  + + ML     P+V TY  +I GL R G  E  
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++ +   G    +VTY  L+  L K GK   +   LD   +M ++   PN VTY VL
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS---LDLFTQMSRKGCSPNYVTYRVL 625

Query: 479 IKGFCQKGKLEDANGLLNEL 498
           I   C  G L+ A  LL E+
Sbjct: 626 INHLCAAGLLDKARLLLGEM 645



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 200/381 (52%), Gaps = 22/381 (5%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GKF+    + KEM R+    +  +++ V+  LC A K+ KA  + ++MK +GV+
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY ILID +CK G I +   A  +F++M   G  P  VT+  LI  + K + +  A
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQ---AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 377

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-------------- 324
             +F  M   G     VTY +L++GLC  G + +A  +  +++ +               
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437

Query: 325 --LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             L PNVVT  AL++G CK   V+ A  L D +   G  P+ I Y+ LID +CK G+++ 
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G LP V TY  LI  + ++G ++    ++++++ +     +VTY  ++ 
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G+S+KA+ LL     ME++   PN+VTY  LI G  + GK++ +  L  ++  KG
Sbjct: 558 GLCRIGESEKALKLLS---LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN  TY+++   +   G +
Sbjct: 615 CSPNYVTYRVLINHLCAAGLL 635



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 189/393 (48%), Gaps = 20/393 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G+   V +   L+ +  K G  E  +++++EM+       + ++  +++
Sbjct: 307 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-----------A 243
              KA ++ +A+DI   M   G  P  VTY  L+DG CK G I K ++           A
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426

Query: 244 DAVFKDMVEN--GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           D+ F    E+   + PN VT+  L+DG CK   +  A ++ + M S G     + Y++LI
Sbjct: 427 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GK+D A  +  +M   G  P+V T  +LI+   K   ++ A  +   + +   +
Sbjct: 487 DGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 546

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY  +ID  C+ G  E A  + + M ++G  P+V TY  LI GL + G ++   ++
Sbjct: 547 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 606

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT-YNVLIK 480
             ++   G     VTY +L+  LC  G   KA  LL EM    K+  WP  +  Y   I+
Sbjct: 607 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYLQGYRCAIQ 662

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           GF +      + G+L E+   G +P    Y ++
Sbjct: 663 GFSK--SFIASLGILEEMESYGTVPIAPVYGML 693



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 194/469 (41%), Gaps = 78/469 (16%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           LGF   K   + G      +      AL KEG++ D       ++R   +L+      ++
Sbjct: 58  LGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMI 114

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GL +A   ++A   +  M+     P VVTY  L+ G+ KK  +G   +   +   M+  
Sbjct: 115 SGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR---IINMMMTE 171

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD------ 307
           G  PN   FN+L+  +C +++ + A K+   M + G   G V YN  I  +C        
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231

Query: 308 -----------------------------------GKLDEAVALRDEMMASGLKPNVVTS 332
                                              GK D+A  L  EMM  G  P+  T 
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + +I   C    VEKA +LF ++   G++P V TY  LID++CK G +E A  +   M  
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P V TY  LI    +   V    +I + +V+ G R   VTY  LV  LCK G   K
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411

Query: 453 AVSLL------------DEMFKME-KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           A  +             D  F  E +    PN+VTY  L+ G C+  K++ A+ LL+ +L
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471

Query: 500 EKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYN 532
             G  PN   Y                Q V  +M + G++P +  H Y 
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV--HTYT 518



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 186/371 (50%), Gaps = 24/371 (6%)

Query: 170 VEYVYKEMKRRRIELN-LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
            E +Y EM      LN ++  NF    LC  GK +KA  ++++M   G  P   TY+ +I
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFA-RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
              C      K+ KA  +F++M   G+ P+  T+  LID FCK   I  A  +FEEM S 
Sbjct: 296 TFLCHAT---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G +  VVTY +LI+      ++ +A  +   M+ +G +PN VT  AL++G CK   + KA
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 349 RVLFDDI----------------SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             ++  +                    L+P+V+TY  L+D  CK  +++ A  + ++ML 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P+   Y+ LI G  + G ++  + +  ++   G    + TY  L+  + KDG+   
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A+ +L +M K   +   PN+VTY  +I G C+ G+ E A  LL+ + EKG  PN  TY  
Sbjct: 533 AMKVLSQMLK---DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 513 VREEMMEKGFI 523
           + + + + G I
Sbjct: 590 LIDGLGKAGKI 600



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 19/388 (4%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D+G + S ++ N L++ L   G+ +    V KEM      ++  +     + LCK G+  
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY--KADAVFKDMVENGILPNEVT 261
            A D++E  +   +   + T+ I        G +   Y  +A +    M  N  +PN VT
Sbjct: 93  DALDMIER-EDFKLDTVLCTHMI-------SGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + TL+ GF K + +    ++   M + G       +NSL++  C +     A  L + M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 322 ASGLKPNVVTSNALINGFCKKK------LVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             G  P  V  N  I   C ++      L++ A  ++ ++       + +         C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G+ + AF +   M+ +G +PD STY+ +I  L     VE    +  E+   G+   + 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY IL+ + CK G  ++A  L +EM  +      P +VTY  LI  + +  ++  AN + 
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCS---PTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
           + +++ G  PN  TY  + + + + G I
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNI 409



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 147/364 (40%), Gaps = 50/364 (13%)

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A D  + +K  G  P  VTYN L+      G +   ++   V K+M E+G   +  T 
Sbjct: 22  HAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFR---VQKEMSESGFCMDRFTV 78

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
                  CK+   + A+ + E           V    +I+GL      DEA++    M  
Sbjct: 79  GCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 135

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +   PNVVT   L++GF KKK +   + + + +  +G +P+   +N+L+ +YC E     
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSRE----------------GNVEGVRNIMN--- 423
           A+ + N M   G  P    YN  I  +  +                G +     ++N   
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 424 ------------------ELVNNGMRAGLV----TYNILVGALCKDGKSKKAVSLLDEMF 461
                             +L+   MR G V    TY+ ++  LC   K +KA  L  EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM- 314

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           KM      P++ TY +LI  FC+ G +E A  L  E+   G  P   TY  +    ++  
Sbjct: 315 KMVGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372

Query: 522 FIPD 525
            +P 
Sbjct: 373 QVPQ 376



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 11/299 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+  + K  K     E F +    G   SV +   L+  + K+G+ +    V 
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M +     N+ ++  +++GLC+ G+  KA  ++  M+  G SP VVTY  LIDG    
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL--- 594

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+  +  +F  M   G  PN VT+  LI+  C    +  A  +  EM        +
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y   I G         ++ + +EM + G  P       LI+ F K   +E A  L  +
Sbjct: 655 QGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 355 ISEQGLSPSVIT----YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + E  +  SV T    Y +LI A C   ++E+AF + + M  RG +P++S + CLI GL
Sbjct: 713 MME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 106/290 (36%), Gaps = 63/290 (21%)

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           AA V T  + +   C     D    L+D     G +P+ VT NAL+        V+    
Sbjct: 6   AAAVATLRASLRRTCSHAAGDSEDPLKD----FGYRPSKVTYNALVQVLSSAGQVDLGFR 61

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF---------------------AMRNS 389
           +  ++SE G      T      A CKEGR  DA                       M  S
Sbjct: 62  VQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEAS 121

Query: 390 MLDRGV-----------LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             D  +           +P+V TY  L++G  ++  +   + I+N ++  G       +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED------AN 492
            LV + C +     A  LL+ M         P  V YN+ I   C + KL        A 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGCP---PGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 493 GLLNELLEKGLIPNQT-----------------TYQIVREEMMEKGFIPD 525
            +  E+L    + N+                   +Q+++ EMM KGF+PD
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK-EMMRKGFVPD 287


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 212/385 (55%), Gaps = 12/385 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  V +   L+    KEGK  +   + + M +R   L++ +++ ++ GLC   ++++A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG-KMYKADAVFKDMVENGIL--PNEVTF 262
           + +   MK LG  P  + Y  L+ G C+ G I   ++    +  D  + GI   P  V++
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           + +IDG CKD     A ++F+EM + G+   V++Y SLI+G C  GK ++A  L +EM+ 
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G++ +V TS+ LI+  CK+  V +A  L + + ++G    ++TY+TLI   C + R+ +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG------LVT 436
           A  +  SM   G  PD   Y  L+ GL + GN+     +  E++N+  R G      L++
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y+I++  LCKD +  +A  L  E   M+ +   P++++Y  LI GFC  GK E A  L N
Sbjct: 305 YSIIIDGLCKDRREDEARELFKE---MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
           E+L+ G+ P+ TT  ++ + + +KG
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKG 386



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 228/434 (52%), Gaps = 17/434 (3%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  +L   SIIID L     K+ +     E FK     G+   V+S   L+      GK+
Sbjct: 298 CKPTLISYSIIIDGL----CKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E  + ++ EM    I+ ++ + + +++ LCK GK+ +A+ ++E +   G  P VVT   L
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           + G C K    ++ KA  +F  M + G +PN VT  TL+ G C+  NI  A+++ + M S
Sbjct: 414 VKGLCMKH---RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470

Query: 288 HGIAAGV------VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
                G+      ++Y+ +I+GLC  G+ DEA  L  EM A G+ P+V++  +LI+GFC+
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
               + A+ LF+++ + G+ P V T++ LID  CKEG++ +A  +   M+ RG +P+  T
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  L+ GL     +     +  ++   G    +VTY  L+  LC+ G  K A+ L  +M 
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650

Query: 462 KMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
               +      P++++Y+++I G C+ G+ ++A  L  E+   G+IPN  +Y  +     
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710

Query: 519 EKGFIPDIEGHMYN 532
             G + D + H++N
Sbjct: 711 RSGKLEDAK-HLFN 723



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 219/392 (55%), Gaps = 12/392 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D G++S V + + L+  L KEGK  +   + + M +R   L++ +++ ++ GLC 
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGIL- 256
             ++++A+ +   M+ LG  P  + Y  L+ G C+ G I    +    +  D    GI  
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 257 -PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P  ++++ +IDG CKD     A ++F+EM + GI   V++Y +LI+G C+ GK ++A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM+  G++P+V TS+ LI+  CKK  V +A  L + + ++G  P V+T  TL+   C
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV----EGVRNIMNELVNNGM- 430
            + R+  A  +   M   G +P+V T   L+ GL + GN+    E  +N++++    G+ 
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 431 -RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +   ++Y+I++  LCK G+  +A  L  EM  +      P++++Y  LI GFC+ GK +
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKAL---GVIPDVISYTSLIHGFCRSGKWK 535

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           DA  L NE+++ G+ P+ TT+ ++ + + ++G
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 183/330 (55%), Gaps = 15/330 (4%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR------RIELNLDSFN 190
           + F +    G   +V++C  L++ L + G  +    ++K M           + N  S++
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 487

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++GLCK G+ ++A ++ ++MK+LGV P V++Y  LI G+C+ G   K   A  +F +M
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG---KWKDAKYLFNEM 544

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           V+ G+ P+  TF+ LID  CK+  +  A ++ E M   G     VTY +L+ GLC++ ++
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCK----KKLVEKARVLFDDISEQG--LSPSV 364
            EA  L  +M   G  P+VVT   L+ G C+    K  +E  + +  D  + G    P V
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I+Y+ +ID  CK GR ++A  +   M   GV+P+V +Y  LI G  R G +E  +++ NE
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +V+ G++   VTY++++   CK+G+  KA+
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 24/422 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +H F  +GK+     +F+ +        +  +S++IDML     K  K     +  + 
Sbjct: 342 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML----CKKGKVIEANKLLEV 397

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G    V++C  L++ L  + +      ++ +M++     N+ +   ++ GLC++G 
Sbjct: 398 VIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 457

Query: 202 LNKASDIMEDMKS------LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           +  A ++ ++M S      +   P  ++Y+I+IDG CK    G+  +A  +FK+M   G+
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK---CGREDEARELFKEMKALGV 514

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+ +++ +LI GFC+      A  +F EM   G+   V T++ LI+ LC +GK+ EA  
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + M+  G  PN VT   L+ G C    + +A  LF  + + G  P V+TY TL+   C
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 376 KEGRMEDAFAMRNSML-DRGVL-----PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           + G ++ A  +   ML D G       PDV +Y+ +I GL + G  +  R +  E+   G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   +++Y  L+   C+ GK + A  L +EM     +    N VTY+V+I GFC++G+++
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD---QGVQLNAVTYSVMIHGFCKEGQID 751

Query: 490 DA 491
            A
Sbjct: 752 KA 753



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 178/352 (50%), Gaps = 34/352 (9%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M  +G+ P V T  +LID +CK+   GK+ +A+ + + MV+ G + + VT++TLI G C 
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKE---GKVIEANELLEVMVQRGCILDIVTYSTLIKGLCM 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM------ASGL 325
              IS A ++F  M   G     + Y +L+ GLC  GK++ A+ L  EM+          
Sbjct: 58  KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 117

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP +V+ + +I+G CK +  ++AR LF ++  QG+ P VI+Y +LI  +C+ G+ E A  
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N MLD G+  DV+T + LI  L +EG V     ++  ++  G    +VTY+ L+  LC
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG--- 502
              +  +A  L      M+K    P+ + Y  L+KG CQ G +  A  L  E+L      
Sbjct: 238 MKHRISEATRLF---MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRY 294

Query: 503 ---LIPNQTTYQIV--------RE--------EMMEKGFIPDIEGHMYNISG 535
                P   +Y I+        RE        EM  +G +PD+  +   I G
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 225/435 (51%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++       +C ++L  L+K   
Sbjct: 63  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+     A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    V + +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P  ITY TLID  CKEG ++ AF     M+      D   Y  LI
Sbjct: 300 QAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL  EG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+     +  +  D+   VL  L K         
Sbjct: 69  RSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJ---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LING C + K D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V    LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++    R   V Y  L+  LC +
Sbjct: 306 DEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+   + A  LFD++  +GL P+ + 
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G    A    +   +M +E    + V Y  LI G C +G
Sbjct: 310 XKGLKPDKITYTTLIDGCCKEGDLDXA---FEHXKRMIQENXRLDXVXYTALISGLCXEG 366

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 367 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 220/413 (53%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 6   MIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLITAYLE 65

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 66  SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 183

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +LI+G C +G
Sbjct: 184 -MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNG 242

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL P   TY 
Sbjct: 243 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 302

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       ++ E+++ 
Sbjct: 303 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 362

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY ++V   CK G   K   LL E   M+++   P++VTYNVL+ G
Sbjct: 363 GLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE---MQRDGHAPSVVTYNVLMNG 412



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 171 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVT 230

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 290

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 291 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 343

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 382



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 50  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 166

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D A  L DEM+  GL P
Sbjct: 167 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVP 226

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 286

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 287 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 346

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY +++  FC+KG +   + LL E+   G  P+ 
Sbjct: 347 GRSVDAEKMLREMLSVGLK---PDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSV 403

Query: 508 TTYQIV 513
            TY ++
Sbjct: 404 VTYNVL 409


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 230/466 (49%), Gaps = 27/466 (5%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
           ++  +  +L    +L SLV    YP   S       NG   S+ T+              
Sbjct: 3   QISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTL-------------- 48

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
                +LM  Y         F    +    G + + ++   L++ +   G+  +    + 
Sbjct: 49  ----TILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHD 104

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            +     +L+  S+  ++NGLCK G+   A   M+ ++   V+  VV Y+ +ID  CK  
Sbjct: 105 HVVAHGFKLDQVSYAILMNGLCKMGETRAA---MQMLRKTWVNADVVMYSTIIDSLCKGK 161

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +   Y+   ++ +M+  GI PN  TF+ L+D  CKD     AM +   M   G+   VV
Sbjct: 162 FVTDAYR---LYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY ++++G C+  ++++A+ + + M+  G++PNV   N +ING CKKK V++A  LF ++
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             + ++P V+TYN LID  CK G++  +  + + M   G   D+ TYN L+  L +  ++
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    ++ E+ + G++  + TY  L+  LCKDG+ + A  +  E+     E     + TY
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILT---EGYHITVWTY 395

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           NV+I G C+KG  ++A  LL+ + +   IP+  +Y+ +   + EKG
Sbjct: 396 NVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 186/332 (56%), Gaps = 7/332 (2%)

Query: 164 EGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           +GKF  D   +Y EM  + I  N+ +F+ +++ LCK  K  +A +++  M   GV P VV
Sbjct: 159 KGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  ++DGYC    + ++ KA  +F  MV+ G+ PN   +N +I+G CK + +  AM +F
Sbjct: 219 TYGAIMDGYCL---VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLF 275

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM    I   VVTYN LI+GLC  GK+  ++ L DEM + G   +++T N+L++  CK 
Sbjct: 276 KEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKN 335

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +++A  L  +I +QG+ P+V TY TLID  CK+GR+EDA+ +   +L  G    V TY
Sbjct: 336 HHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTY 395

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I GL ++G  +    +++ + +N      V+Y  ++ AL + G++ K   LL  M  
Sbjct: 396 NVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIV 455

Query: 463 M---EKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
               ++ KK  N+ T   L   +     LED 
Sbjct: 456 RGLSKRLKKKVNMTTIADLNDKWAAYASLEDG 487



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 208/401 (51%), Gaps = 32/401 (7%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +L  N +L +LVK   +     ++++++   I+ ++ +   ++N  C  G +     I+ 
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKG-----------------------------GIGKMY 241
            +  +G  P  +T+  LI G C  G                             G+ KM 
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +  A  + + +  +  + V ++T+ID  CK + ++ A +++ EM + GI   V T++ L+
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + LC D K  +A+ L   MM  G+KPNVVT  A+++G+C    V KA  +F+ + ++G+ 
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V  YN +I+  CK+ R+++A  +   M  + + PDV TYN LI GL + G +     +
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++E+ + G    ++TYN L+ ALCK+    +A++L+ E   ++ +   PN+ TY  LI G
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKE---IKDQGIQPNVCTYTTLIDG 366

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            C+ G+LEDA  +  E+L +G      TY ++   + +KG 
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 24/311 (7%)

Query: 106 STCSDSLCRNSIIID---------------------MLMLAYVKNMKPHLGFEAFKRAGD 144
           ST  DSLC+   + D                     +L+ A  K+ K             
Sbjct: 151 STIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMK 210

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K +V++   ++       +      ++  M +  +E N+  +N ++NGLCK  ++++
Sbjct: 211 KGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++ ++M    ++P VVTYNILIDG CK   +GK+  +  +  +M   G   + +T+N+
Sbjct: 271 AMNLFKEMHWKKINPDVVTYNILIDGLCK---LGKISTSLELVDEMRSIGKTVDIITYNS 327

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+   CK+ ++  A+ + +E+   GI   V TY +LI+GLC DG+L++A  +  E++  G
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
               V T N +ING CKK L ++A  L   + +    P  ++Y T+I A  ++G      
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTN 447

Query: 385 AMRNSMLDRGV 395
            +  +M+ RG+
Sbjct: 448 KLLCAMIVRGL 458



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 166/312 (53%), Gaps = 9/312 (2%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M  +  +P ++ +N ++    K   I     A ++F+ +  NGI P+ VT   L++ +C 
Sbjct: 1   MLQISPTPPILQFNHILASLVK---INHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCH 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              I+    +  ++   G     +T+ +LI G+C++G+  EA+   D ++A G K + V+
Sbjct: 58  TGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVS 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              L+NG CK   + + R     + +  ++  V+ Y+T+ID+ CK   + DA+ + + M+
Sbjct: 118 YAILMNGLCK---MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+ P+V T++ L+  L ++   +   N++  ++  G++  +VTY  ++   C   +  
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           KA+++ + M +   E   PN+  YN++I G C+K ++++A  L  E+  K + P+  TY 
Sbjct: 235 KALNIFNVMVQEGVE---PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYN 291

Query: 512 IVREEMMEKGFI 523
           I+ + + + G I
Sbjct: 292 ILIDGLCKLGKI 303


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 193/368 (52%), Gaps = 16/368 (4%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  L  LV+ G+      +++E    R   N  ++  +++GLCKAGKL++A +++++M+ 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P V  +N +I G CK G  G    A   FK +      P+ +TFN L+D   K   
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFG---DALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 275 ISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +  A ++FE M  S      VVTY ++INGLC DGKLD A+ L D M  +G  PNV+T +
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L+ G CK    +K   L  +++ +G  P VI YNTL++  CK  R+++A  +   M+  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P V TYN L+    R   V+    ++  +   G    ++ YN ++  LC+D +   A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ------KGKLEDANGLLNELLEKGLIPNQ 507
            +LL +M      +  P+++TY+ +I G C+        KLE A  +L  + + G  PN 
Sbjct: 296 QALLKQMV---AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 508 TTYQIVRE 515
            TY +V E
Sbjct: 353 GTYAVVIE 360



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 201/361 (55%), Gaps = 7/361 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K GK +    +  EM+ R I   +   N V+ GLCKAG+   A    + +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNTLIDGFCKDENI 275
            +P ++T+NIL+D   K G + + ++   +F+ M   +  LPN VT+ T+I+G CKD  +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQ---IFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+++ + M   G    V+TY+ L+ GLC  G+ D+   L  EM   G +P+V+  N L
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +NG CK + +++A  L   +   G  P+V+TYN+L++ +C+  +++ AF +   M +RG 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK--SKKA 453
            PDV  YN +IAGL R+  ++  + ++ ++V       ++TY+ ++  LCKD +  +   
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 454 VSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           +    E+ +M K+    PN  TY V+I+G C+  K + A  LL  +++  ++P+ +++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 513 V 513
           V
Sbjct: 393 V 393



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 215/432 (49%), Gaps = 18/432 (4%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           L++ V+ G+      +F       +    N      L+    K  K    +E      D 
Sbjct: 5   LNLLVRAGQHGQAVQLFR-----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V   N +++ L K G+F D    +K +   +   ++ +FN +++ L K+G++ +A
Sbjct: 60  GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 206 SDIMEDMK-SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             I E M  S    P VVTY  +I+G CK    GK+ +A  +   M E G  PN +T++ 
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKD---GKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L++G CK         + +EM   G    V+ YN+L+NGLC   +LDEA+ L   M+ SG
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P VVT N+L+  FC+ K V++A  L   +SE+G  P VI YNT+I   C++ R++DA 
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNV------EGVRNIMNELVNNGMRAGLVTYN 438
           A+   M+    +PDV TY+ +I GL ++  V      E    I+  +   G      TY 
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++  LC+  KS++A++LL  M   E     P++ +++++I   C+   L+ A  +   +
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSE---VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413

Query: 499 LEKGLIPNQTTY 510
            E+   PN   Y
Sbjct: 414 SERECKPNPVAY 425



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 232/461 (50%), Gaps = 17/461 (3%)

Query: 77  KKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           K  P I +F   +   VK+G+      IF ++ T S  L  N +    ++    K+ K  
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLD 153

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              E      + G   +V++ + L+  L K G+ +    + +EM RR  + ++  +N +L
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLCK+ +L++A ++++ M   G  P VVTYN L++ +C+   + + ++   + + M E 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR---LIQVMSER 270

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------VD 307
           G  P+ + +NT+I G C+D  +  A  + ++M +      V+TY+++I+GLC       D
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            KL+ A  + + M  +G  PN  T   +I G C+ +  ++A  L   + +  + P + ++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +I + CK   ++ A+ +   M +R   P+   Y  LI GLS+ G V+    +  EL+ 
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMV 449

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
              R G+ TYN ++  LC  G+ ++AV +++ M   E    +P+  +Y  LI+G C+   
Sbjct: 450 ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE---CFPDGASYGALIRGLCRVSC 506

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           +E+A  L   +  KG       Y ++  E+ +K  + D  G
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 145/288 (50%), Gaps = 30/288 (10%)

Query: 275 ISAAMKVFEEMGSHGIAAGVV----------TYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++ A+ +    G HG A  +           TY SLI+GLC  GKLD+A  L DEM   G
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG 60

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P V   N +I G CK      A   F  ++    +P +IT+N L+DA  K GR+E+AF
Sbjct: 61  IPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAF 120

Query: 385 AMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            +  SM      LP+V TY  +I GL ++G ++    +++ +   G    ++TY++LV  
Sbjct: 121 QIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G++ K  +LL E   M +    P+++ YN L+ G C+  +L++A  L+  ++  G 
Sbjct: 181 LCKAGRTDKGFTLLQE---MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 504 IPNQTTY-----------QIVR-----EEMMEKGFIPDIEGHMYNISG 535
            P   TY           Q+ R     + M E+G  PD+  +   I+G
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 183/375 (48%), Gaps = 28/375 (7%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           +++   LL+ L  +++  +    + + +++G + +V T                   + L
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY------------------NSL 247

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M  + ++ +    F   +   + G    V++ N ++  L ++ + +D + + K+M   R 
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 183 ELNLDSFNFVLNGLCKAG------KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
             ++ +++ +++GLCK        KL  A +I+E MK  G  P   TY ++I+G C+   
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR- 366

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             K  +A A+ + M+++ ++P+  +F+ +I   CK  ++ AA K+F  M         V 
Sbjct: 367 --KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA 424

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y +LI+GL   G++D+AV +  E+M    +P V T N++++G C    +E+A  + + + 
Sbjct: 425 YAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMI 483

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +   P   +Y  LI   C+   +E+A+ +  ++  +G   +V  YN L+  L ++  + 
Sbjct: 484 HKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLS 543

Query: 417 GVRNIMNELVNNGMR 431
               + N+L+  G +
Sbjct: 544 DAHGVANKLIEAGYK 558



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N  +  L + G+  +AV L  E      E+  PN  TY  LI G C+ GKL+ A  LL+E
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE------ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           + ++G+ P    +  V + + + G   D  G+   ++GT
Sbjct: 56  MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT 94


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 209/401 (52%), Gaps = 22/401 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V + + L+    K+G  E   Y+ +EMK   +E +L S++ + +GLCK    + +
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            DI  D+ + G       Y+ILI G+C +G +   +K   + ++MV N + P+   F +L
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK---LMEEMVRNNLAPDPSNFESL 471

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + GFCK      A++ F  M   GI   + T N +I+  C +G+++EA+ L +EM   G+
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+ T NA+IN  CK++  E+A  LF  + ++ + PSV+ Y+TLID + K+   + A  
Sbjct: 532 FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALM 591

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML  GV PD+  Y  LI  L     +    N+  ++  NGM    ++Y  ++   C
Sbjct: 592 LYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFC 651

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G  +KA +L +EM    +    P +VTY  L+ G+C+  +++ A+ L++E+  KG+ P
Sbjct: 652 RIGDMRKAWALFNEML---QRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITP 708

Query: 506 NQTTYQIV----------------REEMMEKGFIPDIEGHM 530
           +  TY ++                  EM E G +PD   +M
Sbjct: 709 DVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYM 749



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 232/489 (47%), Gaps = 57/489 (11%)

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +F  L        R+ I+ D+L+  +  N       + F +A   GL+ S  SCN LL+ 
Sbjct: 164 LFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKC 223

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG------KLNKASDIMEDMKS 214
           L +  + E +  +++EMK      N+ ++  ++N  CK           +A++I+E+M+ 
Sbjct: 224 LAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER 283

Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
            G SP VVTY+  I G C+ G +                                G++ +
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  V ++M   GI P+  T++ LI GFCK  ++   + + EEM    +   +V+Y+SL +
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFH 403

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC     D ++ +  ++ A+G K +    + LI GFC +  ++ A  L +++    L+P
Sbjct: 404 GLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAP 463

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
               + +L+  +CK G   +A    N ML+ G+LP ++T N +I    REG VE   N+M
Sbjct: 464 DPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLM 523

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           NE+   G+   L TYN ++  LCK+ KS++A+ L   M    K    P++V Y+ LI GF
Sbjct: 524 NEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLML---KRNVLPSVVVYSTLIDGF 580

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
            ++   + A  L   +L+ G+ P+   Y I                + ++M E G  PD 
Sbjct: 581 AKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDK 640

Query: 527 EGHMYNISG 535
             +   I+G
Sbjct: 641 ISYTSVIAG 649



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 151/251 (60%), Gaps = 3/251 (1%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N +++  C+ G++ +A ++M +M++ G+ P + TYN +I+  CK+    K  +A  +F  
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER---KSERALELFPL 560

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M++  +LP+ V ++TLIDGF K  N   A+ ++  M   G+   +V Y  LIN LC   +
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA  L  +M  +G+ P+ ++  ++I GFC+   + KA  LF+++ ++G  P+V+TY +
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+D YCK  R++ A  + + M  +G+ PDV TYN LIA   R GN++    ++NE+  NG
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740

Query: 430 MRAGLVTYNIL 440
           +    +TY +L
Sbjct: 741 VLPDHMTYMML 751



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 190/431 (44%), Gaps = 98/431 (22%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGK--------------LNKAS-DIMEDMKSLGVSPK- 220
           MK+     ++D+F  V+N L  AG                NK + D  E    L  SPK 
Sbjct: 115 MKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKD 174

Query: 221 ----VVTYNILIDGY---------------CKKGGIGKMYKA-----------------D 244
               V+ +++LI  +                KK G+    ++                  
Sbjct: 175 AARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLR 234

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCK------DENISAAMKVFEEMGSHGIAAGVVT-- 296
           ++F++M   G  PN  T+  +++ +CK      D +   A ++ EEM  +G +  VVT  
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 297 ---------------------------------YNSLINGLCVDGKLDEAVALRDEMMAS 323
                                            YN++I+GLC  G+LDEA+ + +EM + 
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+V T + LI+GFCK+  VEK   L +++    + PS+++Y++L    CK+   + +
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +   G   D + Y+ LI G   +G+++    +M E+V N +      +  LV  
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            CK G    A+    E F M  E    P+I T NV+I   C++G++E+A  L+NE+  +G
Sbjct: 475 FCKMGLWVNAL----EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 503 LIPNQTTYQIV 513
           + PN  TY  V
Sbjct: 531 IFPNLFTYNAV 541



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           ++   L+  + K          + R    G+   +++   L+  L    +  +   ++K+
Sbjct: 571 VVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKK 630

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    +  +  S+  V+ G C+ G + KA  +  +M   G  P VVTY  L+DGYCK   
Sbjct: 631 MTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK--- 687

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + ++  AD +  +M   GI P+ VT+N LI    +  N+  A+++  EM  +G+    +T
Sbjct: 688 MNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMT 747

Query: 297 Y 297
           Y
Sbjct: 748 Y 748



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  FK+  + G+    +S   ++    + G       ++ EM +R     + ++  +++
Sbjct: 624 AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK  +++ A  ++++MK  G++P VVTYN+LI  + ++G +    KA  +  +M ENG
Sbjct: 684 GYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLD---KALEMLNEMKENG 740

Query: 255 ILPNEVTFNTL 265
           +LP+ +T+  L
Sbjct: 741 VLPDHMTYMML 751


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 227/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F  + 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLDEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI G C +G++D A+ +   M++  L P+++T N LI G CKK  ++
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++  + TY +++   CK G   K   LL E   M++ 
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE---MQRN 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 246 NGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 161/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI  +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++    +++E+ 
Sbjct: 250 FTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  FK  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFKHRKRMIQGNIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 401



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 21  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFATI 61

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +  +     T   ++  L +  
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLR 121

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 175

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG IP+       I GH  N
Sbjct: 236 DEMLVKGLIPNGVTFTTLIXGHCKN 260


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 201/380 (52%), Gaps = 22/380 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K     G      + ++++  L    K E    +++EMK   +  ++ ++  +++
Sbjct: 207 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 266

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CKAG + +A  + E+M+S+G SP VVTY  LI  Y K   +    +A+ +F  MV+ G
Sbjct: 267 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP---QANDIFHRMVDAG 323

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM----------------GSHGIAAGVVTYN 298
             PN+VT+  L+DG CK  NIS A +V+ ++                  H +A  VVTY 
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++GLC   K+D A  L D M++SG +PN +  +ALI+GFCK   ++ A+ +F  +++ 
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 443

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  PSV TY +LID   K+GR++ A  + + ML     P+V TY  +I GL R G  E  
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++ +   G    +VTY  L+  L K GK   +   LD   +M ++   PN VTY VL
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS---LDLFTQMSRKGCSPNYVTYRVL 560

Query: 479 IKGFCQKGKLEDANGLLNEL 498
           I   C  G L+ A  LL E+
Sbjct: 561 INHLCAAGLLDKARLLLGEM 580



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 200/381 (52%), Gaps = 22/381 (5%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GKF+    + KEM R+    +  +++ V+  LC A K+ KA  + ++MK +GV+
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY ILID +CK G I +   A  +F++M   G  P  VT+  LI  + K + +  A
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQ---AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 312

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-------------- 324
             +F  M   G     VTY +L++GLC  G + +A  +  +++ +               
Sbjct: 313 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 372

Query: 325 --LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             L PNVVT  AL++G CK   V+ A  L D +   G  P+ I Y+ LID +CK G+++ 
Sbjct: 373 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 432

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G LP V TY  LI  + ++G ++    ++++++ +     +VTY  ++ 
Sbjct: 433 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 492

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G+S+KA+ LL     ME++   PN+VTY  LI G  + GK++ +  L  ++  KG
Sbjct: 493 GLCRIGESEKALKLLS---LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN  TY+++   +   G +
Sbjct: 550 CSPNYVTYRVLINHLCAAGLL 570



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 189/393 (48%), Gaps = 20/393 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G+   V +   L+ +  K G  E  +++++EM+       + ++  +++
Sbjct: 242 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-----------A 243
              KA ++ +A+DI   M   G  P  VTY  L+DG CK G I K ++           A
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361

Query: 244 DAVFKDMVEN--GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           D+ F    E+   + PN VT+  L+DG CK   +  A ++ + M S G     + Y++LI
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 421

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GK+D A  +  +M   G  P+V T  +LI+   K   ++ A  +   + +   +
Sbjct: 422 DGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 481

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY  +ID  C+ G  E A  + + M ++G  P+V TY  LI GL + G ++   ++
Sbjct: 482 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 541

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT-YNVLIK 480
             ++   G     VTY +L+  LC  G   KA  LL EM    K+  WP  +  Y   I+
Sbjct: 542 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYLQGYRCAIQ 597

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           GF +      + G+L E+   G +P    Y ++
Sbjct: 598 GFSK--SFIASLGILEEMESYGTVPIAPVYGML 628



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 221/481 (45%), Gaps = 35/481 (7%)

Query: 69  LLHSLVVAKKYPKI---RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
            LH +      P +   R+ L  F+K  +      I + + T  +    N  + + L+ +
Sbjct: 64  FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT--EGCNPNPSLFNSLVHS 121

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED------VEYVYKEMKR 179
           Y         ++   R    G     +  N  + ++  + K          E +Y EM  
Sbjct: 122 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 181

Query: 180 RRIELN-LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
               LN ++  NF    LC  GK +KA  ++++M   G  P   TY+ +I   C      
Sbjct: 182 ANCVLNKVNVANFA-RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT--- 237

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ KA  +F++M   G+ P+  T+  LID FCK   I  A  +FEEM S G +  VVTY 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI--- 355
           +LI+      ++ +A  +   M+ +G +PN VT  AL++G CK   + KA  ++  +   
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 356 -------------SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                            L+P+V+TY  L+D  CK  +++ A  + ++ML  G  P+   Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + LI G  + G ++  + +  ++   G    + TY  L+  + KDG+   A+ +L +M K
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
              +   PN+VTY  +I G C+ G+ E A  LL+ + EKG  PN  TY  + + + + G 
Sbjct: 478 ---DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534

Query: 523 I 523
           I
Sbjct: 535 I 535



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 187/444 (42%), Gaps = 78/444 (17%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
            AL KEG++ D       ++R   +L+      +++GL +A   ++A   +  M+     
Sbjct: 18  HALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 74

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P VVTY  L+ G+ KK  +G   +   +   M+  G  PN   FN+L+  +C +++ + A
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKR---IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 131

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVD------------------------------- 307
            K+   M + G   G V YN  I  +C                                 
Sbjct: 132 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 191

Query: 308 ----------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
                     GK D+A  L  EMM  G  P+  T + +I   C    VEKA +LF ++  
Sbjct: 192 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G++P V TY  LID++CK G +E A  +   M   G  P V TY  LI    +   V  
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL------------DEMFKME- 464
             +I + +V+ G R   VTY  LV  LCK G   KA  +             D  F  E 
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------------- 510
           +    PN+VTY  L+ G C+  K++ A+ LL+ +L  G  PN   Y              
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 511 --QIVREEMMEKGFIPDIEGHMYN 532
             Q V  +M + G++P +  H Y 
Sbjct: 432 SAQEVFLQMTKCGYLPSV--HTYT 453



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 11/299 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+  + K  K     E F +    G   SV +   L+  + K+G+ +    V 
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 472

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M +     N+ ++  +++GLC+ G+  KA  ++  M+  G SP VVTY  LIDG    
Sbjct: 473 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL--- 529

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+  +  +F  M   G  PN VT+  LI+  C    +  A  +  EM        +
Sbjct: 530 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 589

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y   I G         ++ + +EM + G  P       LI+ F K   +E A  L  +
Sbjct: 590 QGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 647

Query: 355 ISEQGLSPSVIT----YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + E  +  SV T    Y +LI A C   ++E+AF + + M  RG +P++S + CLI GL
Sbjct: 648 MME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 15/260 (5%)

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G      T     + LC +G+  +A+   D +     K + V    +I+G  +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADAL---DMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            ++A      +      P+V+TY TL+  + K+ ++     + N M+  G  P+ S +N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK-KAVSLLDEMFKM 463
           L+     E +      ++N +   G   G V YNI +G++C  G+ K  +  LLD   K+
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEKI 175

Query: 464 EKEKKWPNIVTYNVLIKGF----CQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVR 514
             E    N V   V +  F    C  GK + A  L+ E++ KG +P+ +TY      +  
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235

Query: 515 EEMMEKGFIPDIEGHMYNIS 534
              +EK F+   E  M  ++
Sbjct: 236 ATKVEKAFLLFQEMKMVGVT 255


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 243/456 (53%), Gaps = 11/456 (2%)

Query: 73  LVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           ++  +  P I  F   L  F K   +++  ++ H L      +  + I +++L+  +   
Sbjct: 50  MLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL--KGIQPDLITLNILINCFCHM 107

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
            +   GF    +    G     ++ N L++ L  +G+ +   + + ++  +  +LN  S+
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             ++NG+CK G    A  ++  +      P V  Y+ +ID  CK   + + Y    +F +
Sbjct: 168 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY---GLFSE 224

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI  + VT++TLI GFC +  +  A+ +  EM    I   V TYN L++ LC +GK
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA ++   M+ + +KP+V+T + L++G+     V+KA+ +F+ +S  G++P V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +CK   +++A  +   M  + ++P + TY+ LI GL + G +  V ++++E+ + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
             A ++TY+ L+  LCK+G   +A++L +   KM+ ++  PNI T+ +L+ G C+ G+L+
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFN---KMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           DA  +  +LL KG   N  TY ++     ++G + +
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 207/387 (53%), Gaps = 16/387 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  +++ N L+      G+      V  ++ +R    +  + N ++ GLC  G++ KA
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKADAVFKDMVENGILPNEVT 261
               + + + G     V+Y  LI+G CK    +G I  + K D            PN   
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK-------PNVEM 201

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           ++T+ID  CK + +S A  +F EM   GI+A VVTY++LI G C++GKL EA+ L +EM+
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + PNV T N L++  CK+  V++A+ +   + +  + P VITY+TL+D Y     ++
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + N+M   GV PDV TY  LI G  +   V+   N+  E+    M  G+VTY+ L+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK G+      L+DEM    +++  P +++TY+ LI G C+ G L+ A  L N++ +
Sbjct: 382 DGLCKSGRIPYVWDLIDEM----RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIE 527
           + + PN  T+ I+ + + + G + D +
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQ 464



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 197/357 (55%), Gaps = 6/357 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V   + ++ AL K     +   ++ EM  + I  ++ +++ ++ G C  GKL +A  
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    ++P V TYNIL+D  CK+G   K+ +A +V   M++  + P+ +T++TL+D
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEG---KVKEAKSVLAVMLKACVKPDVITYSTLMD 312

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V TY  LING C +  +DEA+ L  EM    + P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            +VT ++LI+G CK   +     L D++ ++G    VITY++LID  CK G ++ A A+ 
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M D+ + P++ T+  L+ GL + G ++  + +  +L+  G    + TYN+++   CK 
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           G  ++A+++L    KME     PN  T+  +I    +K + + A  LL +++ +GL+
Sbjct: 493 GLLEEALTMLS---KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +N+  A+  F  M        ++ +N +++          AV+L   +   G++P+++T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LIN FC    +     +   I ++G  P  +T NTLI   C +G+++ A    + +L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G   +  +Y  LI G+ + G+  G   ++ ++     +  +  Y+ ++ ALCK     +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L  E   M  +    ++VTY+ LI GFC +GKL++A GLLNE++ K + PN  TY I
Sbjct: 218 AYGLFSE---MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 513 VREEMMEKG 521
           + + + ++G
Sbjct: 275 LVDALCKEG 283



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G  + V++ + L+  L K G  +    ++ +MK + I  N+ +F  +L+GLCK G+L 
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++ +D+ + G    V TYN++I+G+CK+   G + +A  +   M +NG +PN  TF 
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ---GLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 264 TLIDG-FCKDENISAAMKVFEEMGSHGI 290
           T+I   F KDEN   A K+  +M + G+
Sbjct: 519 TIIIALFKKDEN-DKAEKLLRQMIARGL 545



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 38/219 (17%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D+AV+  + M+     P ++  N +++ F K K    A  L   +  +G+ P +IT N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +C  G++   F++   +L RG  PD                               
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDT------------------------------ 129

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                VT N L+  LC  G+ KKA+   D   K+  +    N V+Y  LI G C+ G   
Sbjct: 130 -----VTLNTLIKGLCLKGQVKKALHFHD---KLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            A  LL ++  +   PN   Y  + + + +   + +  G
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 222/427 (51%), Gaps = 36/427 (8%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ ++  Y+K       F  F  A + GL ++V + N LL  L KEGK  +   ++ E+ 
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
            + I  N+ S+N ++ G C+   +N A  + ++M   G +P  VT+ IL+DGY KKG I 
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 336

Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
                                          G+ ++   +F   V  G +P  + +NT+I
Sbjct: 337 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGF K+ NI+ A  V+ EM   GI    VTY SLI+G C    +D A+ L ++M   GLK
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++     LI+GFCK++ ++ A  L +++   GLSP+   YN++I  +     +E+A  +
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M++ G+  D+ TY  LI GL + G +    +I  E+++ G+      + +L+  LC 
Sbjct: 517 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 576

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+ + A  +L++M     +   P+++ YN LI G  ++G L++A  L +E+L++GL+P+
Sbjct: 577 KGQFENARKILEDM---NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633

Query: 507 QTTYQIV 513
             TY I+
Sbjct: 634 NITYDIL 640



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 232/493 (47%), Gaps = 60/493 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  +   G   S   + + +S     L  N +   +L+    KN      FE +    
Sbjct: 150 SLMKGYCMQGNLRSALVLVNEIS--ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 207

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G++SSV S N +L   +K   +++   ++ +     +  N+ +FN +L+ LCK GK+N
Sbjct: 208 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMN 266

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A ++ +++ + G+SP VV+YN +I G+C+K  I    K   V+K+M++NG  PN VTF 
Sbjct: 267 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK---VYKEMLDNGFTPNAVTFT 323

Query: 264 TLIDGFCKDENISAAMKVFEEMG-----------------------------------SH 288
            L+DG+ K  +I  A  +F  M                                    S 
Sbjct: 324 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 383

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G     + YN++I+G   +G ++ A  +  EM   G+ P+ VT  +LI+GFCK   ++ A
Sbjct: 384 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 443

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L +D+  +GL   +  Y TLID +CK   M+ A  + N +   G+ P+   YN +I G
Sbjct: 444 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 503

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
                NVE   ++  ++VN G+   L TY  L+  L K G+   A  +  EM     +  
Sbjct: 504 FKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS---KGI 560

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------------- 513
            P+   + VLI G C KG+ E+A  +L ++  K +IP+   Y  +               
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 514 -REEMMEKGFIPD 525
             +EM+++G +PD
Sbjct: 621 LHDEMLDRGLVPD 633



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 195/398 (48%), Gaps = 8/398 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    K GK      ++  +   +  +  N +  + ++L + +    +   + +K   
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEV--IAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 311

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   + ++   L+    K+G  E+   ++  MK   I     +   ++ GLCKAG+  
Sbjct: 312 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 371

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +  D+     S G  P  + YN +IDG+ K+G I     A  V+++M E GI P+ VT+ 
Sbjct: 372 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINL---ASNVYREMCEVGITPSTVTYT 428

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LIDGFCK  NI  A+K+  +M   G+   +  Y +LI+G C    +  A  L +E+  +
Sbjct: 429 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 488

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL PN    N++I GF     VE+A  L+  +  +G+   + TY +LID   K GR+  A
Sbjct: 489 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 548

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   ML +G+LPD   +  LI GL  +G  E  R I+ ++    M   ++ YN L+  
Sbjct: 549 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             K+G  ++A  L DEM         P+ +TY++L+ G
Sbjct: 609 HFKEGNLQEAFRLHDEML---DRGLVPDNITYDILVNG 643



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 199/391 (50%), Gaps = 42/391 (10%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
            ++ A VKEG   +   +  +M      +NL     ++ G C  G L  A  ++ ++   
Sbjct: 115 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 174

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P  VTY++LIDG CK G I K ++    + +M   GI  +  + N++++G+ K ++ 
Sbjct: 175 GLVPNKVTYSVLIDGCCKNGNIEKAFE---FYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  +F +    G+ A V T+N+L++ LC +GK++EA  L DE++A G+ PNVV+ N +
Sbjct: 232 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G C+K  +  A  ++ ++ + G +P+ +T+  L+D Y K+G +E+AF++ + M D  +
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 396 LPDVST-----------------------------------YNCLIAGLSREGNVEGVRN 420
           LP  +T                                   YN +I G  +EGN+    N
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +  E+   G+    VTY  L+   CK      A+ LL++   M+++    +I  Y  LI 
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND---MKRKGLKMDIKAYGTLID 467

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           GFC++  ++ A+ LLNEL   GL PN+  Y 
Sbjct: 468 GFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 176/343 (51%), Gaps = 10/343 (2%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++   N +L  + +     +A ++   M  +GV+    T ++++    K+G I    +A+
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNI---LEAE 60

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             F      G+  ++  ++  +   C   N   A+ +  EM + G      T+ S+I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             +G + EA+ L+D+M+  G   N+  + +L+ G+C +  +  A VL ++ISE GL P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY+ LID  CK G +E AF   + M  +G+   V + N ++ G  +  + +    + N+
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            + +G+ A + T+N L+  LCK+GK  +A +L DE+     +   PN+V+YN +I G C+
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGISPNVVSYNNIILGHCR 296

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           K  +  A  +  E+L+ G  PN  T+ I+ +   +KG   DIE
Sbjct: 297 KDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG---DIE 336



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 131/316 (41%), Gaps = 47/316 (14%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+    N L+    +      A ++  +M   G+     T + ++     +G + EA   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +  A G++ +    +  ++  C K     A  L  ++   G  P   T+ ++I A  K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG + +A  +++ M++ G   +++    L+ G   +GN+     ++NE+  +G+    VT
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 437 YNILVGALCKDGKSKKAVSLLDE-------------------------------MFKMEK 465
           Y++L+   CK+G  +KA     E                               MF    
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------------- 511
           E    N+ T+N L+   C++GK+ +A  L +E++ KG+ PN  +Y               
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 512 --IVREEMMEKGFIPD 525
              V +EM++ GF P+
Sbjct: 303 ACKVYKEMLDNGFTPN 318



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 32/196 (16%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           ++PS+   N L+ A  ++    +A  + N ML  GV  D  T + ++    +EGN+    
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---MEKEKKWPNIVTYN 476
               +    G+      Y+I V  LC    S  A+SLL EM     +  E  + +++T  
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 477 V-----------------------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           V                             L+KG+C +G L  A  L+NE+ E GL+PN+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 508 TTYQIVREEMMEKGFI 523
            TY ++ +   + G I
Sbjct: 181 VTYSVLIDGCCKNGNI 196



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 45/80 (56%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L  +G+FE+   + ++M  + +  ++  +N ++ G  K G L +A  + ++M   G
Sbjct: 570 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 629

Query: 217 VSPKVVTYNILIDGYCKKGG 236
           + P  +TY+IL++G  K  G
Sbjct: 630 LVPDNITYDILVNGKFKGDG 649


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 249/526 (47%), Gaps = 80/526 (15%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           + L     LL TG+ + S+V+A       + +H +    +      IF    T  D L  
Sbjct: 265 EALHIKDELLATGKKM-SVVLAT------TLMHGYCLQREVRKALDIFE--ETLRDGLVP 315

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
             +   +L+    +   P   +E  ++  D+GL  S    N +++ L+ +  ++D   ++
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLF 375

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM    I  +  ++N +++ LC+  K+ +A ++ E M   GV P +VTY+ L+  YC  
Sbjct: 376 KEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVN 434

Query: 235 GGIG---KMY-----------------------------KADAVFKDMVENGILPNEVTF 262
           G +    K+Y                             KA A+  +M +NG+  N+ T+
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G C    +    ++ +   + G     +TYNS+ING    G +  A A+  +M A
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ PN+VT  + I+G+CK    + A  + +D+  +GL P +  YN+LI  +C+EG M  
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSH 614

Query: 383 AFAMRNSMLDRGVLPDVSTYN-----------------------------------CLIA 407
           A  +   ML  G+LP++S YN                                    LI 
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLID 674

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G S++GNV     + +E+V  G     +T+  L   LC++G    A  LLDEM +++   
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR- 733

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             PN++ YN+LI G+ + GKL++A  L +E+LE+ ++P+ TTY I+
Sbjct: 734 --PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 194/358 (54%), Gaps = 6/358 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L Y  N       + +      G   +V++   L++  + +  F+    +  EMK+  
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  N  ++N ++NGLC  G++ +  ++++  ++ G  P  +TYN +I+G+ K G +G  +
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
              AV++ M   GI PN VT+ + IDG+CK      A+K+  ++   G+   +  YNSLI
Sbjct: 547 ---AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C +G +  A+ +   M+  GL PN+   N+ I G+   K++E+A   ++ + ++G+ 
Sbjct: 604 YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGID 663

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
               TY TLID + K+G +  A  + + M+ +G +PD  T+  L  GL R G+++  R +
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++E+    +R  ++ YN+L+    ++GK ++A  L DEM    + K  P+  TY++L+
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML---ERKIMPDDTTYDILV 778



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 195/404 (48%), Gaps = 36/404 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            ++  D G      + N ++  LVK G+ E+  ++  E+     ++++     +++G C 
Sbjct: 235 LRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCL 294

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------- 242
             ++ KA DI E+    G+ P  VTY +LI G  ++G   K Y+                
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354

Query: 243 ----------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                           A ++FK+M ++GI P+  T+N LI   C+   I  A+ ++E+M 
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMN 413

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   +VTY+SL+   CV+G +DEAV L  EM   G  PNVVT   L+ G   K   +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           KA  L  ++ + G+S +  TYNTLI+  C  GR+ +   M       G +P   TYN +I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  + G +     +  ++   G+   +VTY   +   CK      A+ +L++   +  +
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND---VRCK 590

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              P+I  YN LI GFCQ+G +  A  +L  +L+ GL+PN + Y
Sbjct: 591 GLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 43/326 (13%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGL----KSSVLSCNQ-----LLRALVKEGKFEDVEYV 173
           ++ Y   MK H+   AF +A  Y L    K + +SCN      L+  L   G+  +V  +
Sbjct: 456 VVTYTTLMKGHINKAAFDKA--YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            K  +         ++N ++NG  KAG +  A  + + M + G+ P +VTY   IDGYCK
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573

Query: 234 KG---------------GI-----------------GKMYKADAVFKDMVENGILPNEVT 261
                            G+                 G M  A  V   M+++G+LPN   
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N+ I G+   + +  A++ +E+M   GI     TY +LI+G   DG +  A+ L  EM+
Sbjct: 634 YNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A G  P+ +T  AL +G C+   ++ AR L D+++   + P+V+ YN LI+ Y + G+++
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIA 407
           +AF + + ML+R ++PD +TY+ L+ 
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYDILVG 779



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 168/313 (53%), Gaps = 11/313 (3%)

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDG 268
           +M+  G       +++++    K+G    MY  DAV  F +M  + I P++   +  I  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEG----MYD-DAVRLFDEMPASEIEPDQRVCSVAIAS 221

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK  + + A+ V  +M   G      T+NS+++ L   G+++EA+ ++DE++A+G K +
Sbjct: 222 LCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMS 281

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV +  L++G+C ++ V KA  +F++    GL P+ +TY  LI    +EG  E A+ +  
Sbjct: 282 VVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M D G+LP  + +N +I GL  +   +   ++  E+ ++G+     TYNIL+  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRR 400

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K ++A++L +   KM +    P IVTY+ L+  +C  G +++A  L  E+  KG  PN  
Sbjct: 401 KIREALNLWE---KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 509 TYQIVREEMMEKG 521
           TY  + +  + K 
Sbjct: 458 TYTTLMKGHINKA 470



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 5/253 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++ F+K G   S   ++  +  C+  +  N +     +  Y K     L  +      
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQM--CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL+  + + N L+    +EG       V   M +  +  N+  +N  + G      + 
Sbjct: 589 CKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A    E M   G+     TY  LIDG+ K G +    K   ++ +MV  G +P+ +TF 
Sbjct: 649 EALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALK---LYSEMVAKGNIPDHITFT 705

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L  G C++ +I  A K+ +EM    I   V+ YN LING   +GKL EA  L DEM+  
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 324 GLKPNVVTSNALI 336
            + P+  T + L+
Sbjct: 766 KIMPDDTTYDILV 778



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 90/295 (30%)

Query: 0   -----------------------------------                         
                                                                       
Sbjct: 166 AEMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLF                          200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 318 DEMMASGL                                                     325
           DEM AS +                                                    
Sbjct: 201 DEMPASEI                                                     208

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+    +  I   CK +   +A ++   + + G  P   T+N+++D   K GRME+A  
Sbjct: 209 EPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALH 268

Query: 386 MRNSMLDR-----------------------------------GVLPDVSTYNCLIAGLS 410
           +++ +L                                     G++P   TY  LI G +
Sbjct: 269 IKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCT 328

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
            EG  E    +  ++ ++G+      +N+++  L  D   K AVSL  EM     +   P
Sbjct: 329 EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM----ADSGIP 384

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           +  TYN+LI   CQ+ K+ +A  L  ++ E G+ P   TY                  + 
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444

Query: 515 EEMMEKGFIPDI 526
            EM  KGF P++
Sbjct: 445 TEMPGKGFTPNV 456



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 3/203 (1%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M A G+ P+  +   L+    +      A  L  ++  +G       ++ ++ A  KEG 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            +DA  + + M    + PD    +  IA L +  +      ++ ++ + G      T+N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +V  L K G+ ++A+ + DE+    K+    ++V    L+ G+C + ++  A  +  E L
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKM---SVVLATTLMHGYCLQREVRKALDIFEETL 309

Query: 500 EKGLIPNQTTYQIVREEMMEKGF 522
             GL+P   TY ++     E+G 
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGM 332


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 206/379 (54%), Gaps = 6/379 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G   FK+  +     +V +   ++ AL    +  +   ++ EM+ R  E N+ ++  +++
Sbjct: 303 GISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVD 362

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK  KL+++  I+ +M   G+ P VVTYN LI GYC++G I     A  +   M  N 
Sbjct: 363 AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA---ALEILGLMESNN 419

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PNE T+N LI GF K +++  AM +  +M    +   +VTYNSLI+  C  G  D A 
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L D +  +GL P+  T +  I+  CK K +E+A  LF+ + E+G+  + + Y  LID +
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G++++A ++   M     LP+ STYN LI G+ +EG V+   +++  +   G++  +
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY IL+  + ++G    A  + ++M     +   P++ TY   I  +C  G +++A G+
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHK---PDVYTYTAFIHTYCTSGNVKEAEGM 656

Query: 495 LNELLEKGLIPNQTTYQIV 513
           +  ++E G++P+  TY ++
Sbjct: 657 MARMIEAGVMPDSLTYTLL 675



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 6/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL     +   L+    +         V+  M  +    N  S+  +++GLC+AG++++ 
Sbjct: 244 GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEG 303

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M+     P V TY ++I       G  +  +   +F +M E    PN  T+  +
Sbjct: 304 ISLFKKMREDDCYPTVRTYTVIIHALF---GNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK+  +  + ++  EM   G+   VVTYN+LI G C +G+++ A+ +   M ++  
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN  T N LI GF K+K V KA  L   + E  L+PS++TYN+LI   CK G  + A+ 
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + + + G++PD  TY+  I  L +   +E   ++ N L   G++A  V Y  L+   C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K GK  +A+SLL+   +M  E   PN  TYN LI G C++GK+++   ++  + + G+ P
Sbjct: 541 KAGKIDEAISLLE---RMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597

Query: 506 NQTTYQIVREEMMEKG 521
              TY I+ EEM+ +G
Sbjct: 598 TVATYTILIEEMLREG 613



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 196/399 (49%), Gaps = 35/399 (8%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   K SV S N+LL  L +    ++++ VY EM    I  N+ + N ++N   K G + 
Sbjct: 172 DIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIV 231

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A+  +  +   G+SP   TY  LI GYC+   +   YK   VF  M   G   NEV++ 
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYK---VFNMMPNKGCRRNEVSYT 288

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+I G C+   I   + +F++M        V TY  +I+ L  + +  E + L +EM   
Sbjct: 289 TIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRER 348

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             +PNV T   +++  CK++ ++++R + +++ E+GL PSV+TYN LI  YC+EGR+E A
Sbjct: 349 SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAA 408

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M      P+  TYN LI G S+  +V     ++++++ + +   LVTYN L+  
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468

Query: 444 LCKDGKSKKAVSLLD-------------------------------EMFKMEKEKKW-PN 471
            CK G    A  LLD                               ++F   KEK    N
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            V Y  LI G C+ GK+++A  LL  +  +  +PN +TY
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTY 567



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 206/429 (48%), Gaps = 21/429 (4%)

Query: 61  HSLLLTGRLLHSLVVAKK------YPKIRSF---LHMFVKNGKFTSVSTIFHALS--TCS 109
           H L   GR+   + + KK      YP +R++   +H    N +      +F+ +   +C 
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
            ++   ++++D    A  K  K            + GL  SV++ N L+R   +EG+ E 
Sbjct: 352 PNVHTYTVMVD----AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +   M+      N  ++N ++ G  K   ++KA  ++  M    ++P +VTYN LI 
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIH 467

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK G     YK   + K   ENG++P++ T++  ID  CK + +  A  +F  +   G
Sbjct: 468 VQCKAGHFDSAYKLLDLLK---ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG 524

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I A  V Y +LI+G C  GK+DEA++L + M +    PN  T N+LI G CK+  V++  
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            + +++S+ G+ P+V TY  LI+   +EG  + A  + N M+  G  PDV TY   I   
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM---EKE 466
              GNV+    +M  ++  G+    +TY +L+ A  + G +  A ++L  M         
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704

Query: 467 KKWPNIVTY 475
             W N++ Y
Sbjct: 705 PIWNNLIWY 713



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 190/402 (47%), Gaps = 52/402 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V S + LL+ L+    F   E +   M +  +  ++D   F+L+ L +  +    
Sbjct: 115 GFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACV--SVDDIRFLLDFLRQMNR---- 168

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
                D   +     V +YN L+    +   I +M +   V+ +M+ + I+PN  T NT+
Sbjct: 169 -----DDNDIKFKLSVRSYNELLMMLARFLMIDEMKR---VYTEMLNDMIVPNIYTLNTM 220

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++ + K  NI  A     ++   G++    TY SLI G C +  ++ A  + + M   G 
Sbjct: 221 VNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGC 280

Query: 326 KPNVVTSNALINGFCKK-------KLVEKARV---------------------------- 350
           + N V+   +I+G C+         L +K R                             
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD 340

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF+++ E+   P+V TY  ++DA CKE +++++  + N M+++G++P V TYN LI G  
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
            EG +E    I+  + +N  R    TYN L+    K     KA++LL    KM + K  P
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLS---KMLESKLTP 457

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           ++VTYN LI   C+ G  + A  LL+ L E GL+P+Q TY +
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 200/378 (52%), Gaps = 6/378 (1%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           +F R  D   +  ++  N+LL ++V+  K+E V  ++KEM+ R I+ N+ + + ++N  C
Sbjct: 27  SFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFC 86

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
               ++    +       G  P VV +  LIDG C+   IGK   A  + K+M   G +P
Sbjct: 87  FLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCR---IGKTELAAGLLKEMGLVGCVP 143

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + VT N+L+ G+C    I    K+F  M S G+   V +Y+  ING C   K+DEA+ L 
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELF 203

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           DEM   G+ PN VT N LI   C+      A+VLF  +   GLSP ++ Y+TL+D +CK+
Sbjct: 204 DEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQ 263

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +++   +   M  R V PD+  Y  +I G+ R   V+  + +++ L+  G++  + TY
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             LV  LC++G   +A+ L     KME++   P   +YNVL++G  Q         L++E
Sbjct: 324 TALVDGLCREGSIIEALRLFR---KMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHE 380

Query: 498 LLEKGLIPNQTTYQIVRE 515
           + ++G   +  T   +++
Sbjct: 381 MADRGFYADAVTRTFLKD 398



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 193/377 (51%), Gaps = 22/377 (5%)

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G  +D    +  M  R  +  +  FN +L+ + +  K      + ++M+  G+   V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           +ILI+ +C    +   +   +VF   ++ G  P+ V F TLIDG C+      A  + +E
Sbjct: 79  SILINCFCFLHHVDYGF---SVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           MG  G    VVT NSL+ G C  GK+D+   +   M++ GLKP+V + +  ING+CK + 
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A  LFD++S +G+ P+ +TYNTLI A C+  R  DA  +   M   G+ PD+  Y+ 
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G  ++GN++ +  +  E+    ++  LV Y I++  +C+  K K A  +L  +    
Sbjct: 256 LLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV-- 313

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------- 515
            E   P++ TY  L+ G C++G + +A  L  ++ E G +P   +Y ++ +         
Sbjct: 314 -EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372

Query: 516 -------EMMEKGFIPD 525
                  EM ++GF  D
Sbjct: 373 TVVQLIHEMADRGFYAD 389



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 20/351 (5%)

Query: 68  RLLHSLVVAKKYPKIRS-FLHMFVKNGK------------FTSVSTIFHALSTCSDSLCR 114
           RLL S+V  KKY  + S F  M  +  K            F  +  + +  S    +L R
Sbjct: 45  RLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKR 104

Query: 115 ----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
               + +I   L+    +  K  L     K  G  G    V++CN L+R    +GK + V
Sbjct: 105 GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKV 164

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             ++  M  + ++ ++ S++  +NG CK  K+++A ++ ++M   GV P  VTYN LI  
Sbjct: 165 RKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKA 224

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            C+     +   A  +F+ M   G+ P+ + ++TL+DGFCK  N+   + +F+EM    +
Sbjct: 225 LCQA---LRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +V Y  +ING+C   K+ +A  +   ++  GLKP+V T  AL++G C++  + +A  
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           LF  + E G  P   +YN L+    +         + + M DRG   D  T
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 154/323 (47%), Gaps = 32/323 (9%)

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +KG  G +  A A F  M++    P  + FN L+    + +     + +F+EM   GI  
Sbjct: 14  RKGYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKY 73

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            V T + LIN  C    +D   ++  + +  G KP+VV    LI+G C+    E A  L 
Sbjct: 74  NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++   G  P V+T N+L+  YC +G+++    + + M+ +G+ PDV +Y+  I G  + 
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL---------------- 456
             ++    + +E+ + G+    VTYN L+ ALC+  + + A  L                
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253

Query: 457 ------------LDEMF----KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
                       LDEM     +M++    P++V Y ++I G C+  K++DA  +L+ L+ 
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313

Query: 501 KGLIPNQTTYQIVREEMMEKGFI 523
           +GL P+  TY  + + +  +G I
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSI 336


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 221/435 (50%), Gaps = 23/435 (5%)

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           +C++ L  N ++   L+  +++       F+  K     G++ + ++ + L+R L K G+
Sbjct: 214 SCAE-LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            +    + K+M R     +  ++N ++ G  +      A  ++ +M++ G+SP V TY+I
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +I G C+ G   +  KA  + ++M   G+ PN   +  LI G+C++ N+S A ++F++M 
Sbjct: 333 MIHGLCQSG---EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   +  YNSLI GL   G+++E+     +M   GL PN  T + LI+G+ K   +E
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  L   + + GL P+ + Y  L+++Y K   +E   +   SMLD+GV+ D   Y  LI
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             LS  GN+E    +++E+  NG    +  Y+ L+  LCK    +KA  +LDEM K   +
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ--------------- 511
              PNIV YN LI G C+ G +  A  + N +L KGL+PN  TY                
Sbjct: 570 ---PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626

Query: 512 -IVREEMMEKGFIPD 525
             +  EM+  G  PD
Sbjct: 627 FYLYNEMLATGITPD 641



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 219/414 (52%), Gaps = 11/414 (2%)

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           +++I  ALS   DS  R+  ++D+L+  Y K+ +     E      D GL  S+  CN L
Sbjct: 32  LASIHRALS---DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNAL 88

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           L+ L++      +  V + M    I  ++ +++ ++   CK  + + A  ++ +M+  G 
Sbjct: 89  LKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGC 148

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
               VTYN+LI G C+ G + + +      KDM + G++P+  T+  LI+G CK    + 
Sbjct: 149 GLNTVTYNVLIAGLCRSGAVEEAF---GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  + +EM    +   VV Y +LI+G   +G  DEA  +  EM+A+G++PN +T + L+ 
Sbjct: 206 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK   +++A +L   +      P  ITYN +I+ + +    +DAF + + M + G+ P
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V TY+ +I GL + G  E   +++ E+   G++     Y  L+   C++G     VSL 
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN----VSLA 381

Query: 458 DEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            E+F KM K    P++  YN LI G  + G++E++     ++ E+GL+PN+ TY
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 435



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 224/460 (48%), Gaps = 12/460 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RLL  +  A   P + ++   +H   ++G+    S +   ++T    L  N+ +   L+ 
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT--KGLKPNAFVYAPLIS 370

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +     L  E F +     +   +   N L+  L K G+ E+    + +M+ R +  
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +++ +++G  K G L  A  +++ M   G+ P  V Y  L++ Y K   I K+    
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV---S 487

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           + FK M++ G++ +   +  LI       N+ AA +V  E+  +G    V  Y+SLI+GL
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C     ++A  + DEM   G+ PN+V  NALI+G CK   +  AR +F+ I  +GL P+ 
Sbjct: 548 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY +LID  CK G + +AF + N ML  G+ PD   Y+ L  G S  G++E    ++ E
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 667

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G  A + ++N LV   CK GK ++ + LL  +         PN +T   +I G  +
Sbjct: 668 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSE 723

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
            GKL + + +  EL +K        +  +  +M+ +G IP
Sbjct: 724 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 763



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 215/439 (48%), Gaps = 76/439 (17%)

Query: 161 LVKEGKF-----EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+ EG F     +D   +  EM+   I  N+ +++ +++GLC++G+  KASD++E+M + 
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356

Query: 216 GVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKA 243
           G+ P    Y  LI GYC++G +                                G++ ++
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV---------------------- 281
              F  M E G+LPNE T++ LI G+ K+ ++ +A ++                      
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476

Query: 282 -------------FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
                        F+ M   G+      Y  LI+ L   G ++ A  +  E+  +G  P+
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPD 536

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V   ++LI+G CK    EKA  + D++S++G+ P+++ YN LID  CK G +  A  + N
Sbjct: 537 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 596

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           S+L +G++P+  TY  LI G  + G++     + NE++  G+      Y++L       G
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 656

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             ++A+ L++EMF     +   +I ++N L+ GFC++GK+++   LL+ ++ +GL+PN  
Sbjct: 657 DLEQAMFLIEEMFL----RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712

Query: 509 TYQIVREEMMEKGFIPDIE 527
           T + +   + E G + ++ 
Sbjct: 713 TIENIISGLSEAGKLSEVH 731



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 197/411 (47%), Gaps = 29/411 (7%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N      L+  Y+KN       +  +R  D GLK + +    LL +  K    E V 
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
             +K M  + + L+   +  +++ L  +G +  A  ++ +++  G  P V  Y+ LI G 
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK        KA  +  +M + G+ PN V +N LIDG CK  +IS A  VF  + + G+ 
Sbjct: 548 CKTA---DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 604

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY SLI+G C  G +  A  L +EM+A+G+ P+    + L  G      +E+A  L
Sbjct: 605 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 664

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++  +G   S+ ++N L+D +CK G+M++   + + ++ RG++P+  T   +I+GLS 
Sbjct: 665 IEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 723

Query: 412 EGNVEGVRNIMNEL-------------------VNNGMRAGLVTYNILVGALCKDGKSKK 452
            G +  V  I  EL                   +N G +  L   + ++   CK+G   K
Sbjct: 724 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDK 782

Query: 453 AVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           A+ L D +      K  P    +Y  ++   C+KGKL +A  LL E+ ++G
Sbjct: 783 ALMLRDVIVA----KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 158/399 (39%), Gaps = 92/399 (23%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++KNG   S   +   +      L  N +I   L+ +Y K+         FK   D
Sbjct: 438 LIHGYLKNGDLESAEQLVQRM--LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 495

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+         L+  L   G  E    V  E+++     ++  ++ +++GLCK     K
Sbjct: 496 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREK 555

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I+++M   GV P +V YN LIDG CK G I     A  VF  ++  G++PN VT+ +
Sbjct: 556 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY---ARNVFNSILAKGLVPNCVTYTS 612

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIA--------------------------------- 291
           LIDG CK  +IS A  ++ EM + GI                                  
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672

Query: 292 -AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF----------- 339
            A + ++N+L++G C  GK+ E + L   +M  GL PN +T   +I+G            
Sbjct: 673 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 732

Query: 340 ------------------------------------------CKKKLVEKARVLFDDISE 357
                                                     CK+  ++KA +L D I  
Sbjct: 733 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVA 792

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +       +Y  ++D  C++G++ +A  +   M  RG L
Sbjct: 793 KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 831



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 19/184 (10%)

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G  E   ++ +EM  R    ++ SFN +++G CK GK+ +   ++  +   G+ P  +T 
Sbjct: 656 GDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 714

Query: 225 NILIDGYCKKGGIGKMYKA----------------DAVFKDMVENGILPNEVTFNTLIDG 268
             +I G  + G + +++                   ++F DM+  G +P +V  + +I  
Sbjct: 715 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV-DDMIRD 773

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKP 327
            CK+ N+  A+ + + + +     G  +Y ++++ LC  GKL EA+ L  EM   G L+P
Sbjct: 774 HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833

Query: 328 NVVT 331
            +V 
Sbjct: 834 TLVA 837



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 56/181 (30%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           SP+V+  + L+D Y K GR++DA  +   M DRG+ P +   N L+  L R   +  +  
Sbjct: 46  SPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWK 103

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +   +V  G+                                       P++ TY+ LI+
Sbjct: 104 VREFMVGAGIS--------------------------------------PDVYTYSTLIE 125

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIP 524
            +C+  + + A  +L E+ E+G   N  TY ++                +++M + G +P
Sbjct: 126 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 185

Query: 525 D 525
           D
Sbjct: 186 D 186


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 236/445 (53%), Gaps = 9/445 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H +  +G +   + +F  ++  S  L  +++     M +  K+ +     E F+   
Sbjct: 307 AIIHGYSCSGHWKESAKMFRKMT--SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G    ++S + LL     EG+F D+  ++  M  + I  N    N +++   K G ++
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +  +M+  GV P VVTY+ LI  +C+   +G++  A   F  M+  GI PN   ++
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCR---MGRLADAMEKFSQMISIGIEPNTAVYH 481

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGI-AAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           +LI GFC   ++  A +   EM S G+    +V ++S+I+ LC++G++ +A  + + ++ 
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIH 541

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G +P +VT N+LI+G+C    +EKA  + D +   G+ P V+T NTL+  YCK G+++D
Sbjct: 542 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDD 601

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              +   ML + V P   TYN ++ GL R G     + + +E++++G    + TY IL+ 
Sbjct: 602 GLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 661

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC++  + +A++L  ++  M+ +    +I   N +I    +  + E+AN L   +   G
Sbjct: 662 GLCRNDLTDEAITLFHKLGAMDCKF---DITILNTMINALYKVRRREEANDLFAAISTSG 718

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIE 527
           L+PN +TY ++   ++++G + + +
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEAD 743



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 206/411 (50%), Gaps = 10/411 (2%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKR 179
           +LM    +  +P LG     R    GLK+  +     L+ L    +  E V+ +   M  
Sbjct: 129 ILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSE 188

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGI 237
                +  S+N V+  LC   +  +A D+++ M   G   SP VV++N +I G+ K+G +
Sbjct: 189 LSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEV 248

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            K   A  +F +MV+ G++P+  T+N+++D  CK   +  A  V  +M   G+    VTY
Sbjct: 249 SK---ACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N++I+G    G   E+  +  +M + GL P+ VT ++ ++  CK    + A  +F  ++ 
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G  P +++Y+ L+  Y  EGR  D   + +SM D+G++ +    N LI+  ++ G ++ 
Sbjct: 366 KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDE 425

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E+   G+R  +VTY+ L+ A C+ G+   A+    +M  +  E   PN   Y+ 
Sbjct: 426 AMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE---PNTAVYHS 482

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGL-IPNQTTYQIVREEMMEKGFIPDIE 527
           LI GFC  G L  A   ++E++ KGL  PN   +  +   +  +G + D +
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 158/308 (51%), Gaps = 3/308 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L  EG+  D + V+  +        + +FN +++G C  GK+ KA  +++ M S
Sbjct: 517 SSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 576

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P VVT N L+ GYCK G   K+     +F++M+   + P  VT+N ++DG  +   
Sbjct: 577 VGIEPDVVTNNTLVSGYCKSG---KIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            SAA K+F EM   G A  + TY  L+ GLC +   DEA+ L  ++ A   K ++   N 
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +IN   K +  E+A  LF  IS  GL P+V TY  +I    KEG +E+A  M +SM   G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P     N +I  L ++G++      M+++    +     T ++L+      GK ++ +
Sbjct: 754 CAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQI 813

Query: 455 SLLDEMFK 462
             L   ++
Sbjct: 814 KFLPAKYQ 821



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 15/263 (5%)

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           EE G       V TY  L++  C   + D   A    ++ +GLK   + +   +   C  
Sbjct: 113 EEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHA 172

Query: 343 KLVEKA-RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG--VLPDV 399
           K  ++A  VL   +SE    P  I+YNT+I + C + R ++A  M   M   G    PDV
Sbjct: 173 KRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 232

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            ++N +I G  ++G V    N+ NE+V  G+   + TYN +V ALCK     KA  +L +
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M     E   P+ VTYN +I G+   G  +++  +  ++  KGLIP+  T+      + +
Sbjct: 293 MVDKGVE---PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCK 349

Query: 520 KGFIPDIE---------GHMYNI 533
            G   D E         GHM +I
Sbjct: 350 HGRSKDAEEIFQYMTTKGHMPDI 372



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 168/383 (43%), Gaps = 40/383 (10%)

Query: 160 ALVKEGKF--EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           A V+ G F  +D  +++ E+ R+   ++  S N  L  L +A           D  S   
Sbjct: 49  ARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARA----------PDSVSCSN 98

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEV-TFNTLIDGFCKDEN 274
            P +V    L +  C++                 E G  + P  V T+  L+D  C+   
Sbjct: 99  GPALVL--ALFNRICRE-----------------EAGPRVAPLTVRTYGILMDCCCRARR 139

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-ALRDEMMASGLKPNVVTSN 333
                     +   G+  G +   + +  LC   + DEAV  L   M      P+ ++ N
Sbjct: 140 PDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYN 199

Query: 334 ALINGFCKKKLVEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            +I   C     ++A  +   ++++G   SP V+++NT+I  + K+G +  A  + N M+
Sbjct: 200 TVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV 259

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +GV+PDV TYN ++  L +   ++    ++ ++V+ G+    VTYN ++      G  K
Sbjct: 260 QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWK 319

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           ++  +     KM  +   P+ VT++  +   C+ G+ +DA  +   +  KG +P+  +Y 
Sbjct: 320 ESAKMFR---KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376

Query: 512 IVREEMMEKGFIPDIEGHMYNIS 534
           I+      +G   D+    ++++
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMA 399


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 193/368 (52%), Gaps = 16/368 (4%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  L  LV+ G+      +++E    R   N  ++  +++GLCKAGKL++A +++++M+ 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P V  +N +I G CK G  G    A   FK +      P+ +TFN L+D   K   
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFG---DALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 275 ISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +  A ++FE M  S      VVTY ++INGLC DGKLD A+ L D M  +G  PNV+T +
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L+ G CK    +K   L  +++ +G  P VI YNTL++  CK  R+++A  +   M+  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P V TYN L+    R   V+    ++  +   G    ++ YN ++  LC+D +   A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ------KGKLEDANGLLNELLEKGLIPNQ 507
            +LL +M      +  P+++TY+ +I G C+        KLE A  +L  + + G  PN 
Sbjct: 296 QALLKQMV---AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 508 TTYQIVRE 515
            TY +V E
Sbjct: 353 GTYAVVIE 360



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 201/361 (55%), Gaps = 7/361 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K GK +    +  EM+ R I   +   N V+ GLCKAG+   A    + +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNTLIDGFCKDENI 275
            +P ++T+NIL+D   K G + + ++   +F+ M   +  LPN VT+ T+I+G CKD  +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQ---IFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+++ + M   G    V+TY+ L+ GLC  G+ D+   L  EM   G +P+V+  N L
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +NG CK + +++A  L   +   G  P+V+TYN+L++ +C+  +++ AF +   M +RG 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK--SKKA 453
            PDV  YN +IAGL R+  ++  + ++ ++V       ++TY+ ++  LCKD +  +   
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 454 VSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           +    E+ +M K+    PN  TY V+I+G C+  K + A  LL  +++  ++P+ +++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 513 V 513
           V
Sbjct: 393 V 393



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 215/432 (49%), Gaps = 18/432 (4%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           L++ V+ G+      +F       +    N      L+    K  K    +E      D 
Sbjct: 5   LNLLVRAGQHGQAVQLFR-----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V   N ++R L K G+F D    +K +   +   ++ +FN +++ L K+G++ +A
Sbjct: 60  GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 206 SDIMEDMK-SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             I E M  S    P VVTY  +I+G CK    GK+ +A  +   M E G  PN +T++ 
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKD---GKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L++G CK         + +EM   G    V+ YN+L+NGLC   +LDEA+ L   M+ SG
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P VVT N+L+  FC+ K V++A  L   +SE+G  P VI YNT+I   C++ R++DA 
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNV------EGVRNIMNELVNNGMRAGLVTYN 438
           A+   M+    +PDV TY+ +I GL ++  V      E    I+  +   G      TY 
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++  LC+  KS++A++LL  M   E     P++ +++++I   C+   L+ A  +   +
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSE---VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413

Query: 499 LEKGLIPNQTTY 510
            E+   PN   Y
Sbjct: 414 SERECKPNPVAY 425



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 232/461 (50%), Gaps = 17/461 (3%)

Query: 77  KKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           K  P I +F   +   VK+G+      IF ++ T S  L  N +    ++    K+ K  
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLD 153

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              E      + G   +V++ + L+  L K G+ +    + +EM RR  + ++  +N +L
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLCK+ +L++A ++++ M   G  P VVTYN L++ +C+   + + ++   + + M E 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR---LIQVMSER 270

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------VD 307
           G  P+ + +NT+I G C+D  +  A  + ++M +      V+TY+++I+GLC       D
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            KL+ A  + + M  +G  PN  T   +I G C+ +  ++A  L   + +  + P + ++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +I + CK   ++ A+ +   M +R   P+   Y  LI GLS+ G V+    +  EL+ 
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMV 449

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
              R G+ TYN ++  LC  G+ ++AV +++ M   E    +P+  +Y  LI+G C+   
Sbjct: 450 ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE---CFPDGASYGALIRGLCRVSC 506

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           +E+A  L   +  KG       Y ++  E+ +K  + D  G
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 145/288 (50%), Gaps = 30/288 (10%)

Query: 275 ISAAMKVFEEMGSHGIAAGVV----------TYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++ A+ +    G HG A  +           TY SLI+GLC  GKLD+A  L DEM   G
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG 60

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P V   N +I G CK      A   F  ++    +P +IT+N L+DA  K GR+E+AF
Sbjct: 61  IPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAF 120

Query: 385 AMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            +  SM      LP+V TY  +I GL ++G ++    +++ +   G    ++TY++LV  
Sbjct: 121 QIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK G++ K  +LL E   M +    P+++ YN L+ G C+  +L++A  L+  ++  G 
Sbjct: 181 LCKAGRTDKGFTLLQE---MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 504 IPNQTTY-----------QIVR-----EEMMEKGFIPDIEGHMYNISG 535
            P   TY           Q+ R     + M E+G  PD+  +   I+G
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 183/375 (48%), Gaps = 28/375 (7%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           +++   LL+ L  +++  +    + + +++G + +V T                   + L
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY------------------NSL 247

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M  + ++ +    F   +   + G    V++ N ++  L ++ + +D + + K+M   R 
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 183 ELNLDSFNFVLNGLCKAG------KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
             ++ +++ +++GLCK        KL  A +I+E MK  G  P   TY ++I+G C+   
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR- 366

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             K  +A A+ + M+++ ++P+  +F+ +I   CK  ++ AA K+F  M         V 
Sbjct: 367 --KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA 424

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y +LI+GL   G++D+AV +  E+M    +P V T N++++G C    +E+A  + + + 
Sbjct: 425 YAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMI 483

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +   P   +Y  LI   C+   +E+A+ +  ++  +G   +V  YN L+  L ++  + 
Sbjct: 484 HKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLS 543

Query: 417 GVRNIMNELVNNGMR 431
               + N+L+  G +
Sbjct: 544 DAHGVANKLIEAGYK 558



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N  +  L + G+  +AV L  E      E+  PN  TY  LI G C+ GKL+ A  LL+E
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE------ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           + ++G+ P    +  V   + + G   D  G+   ++GT
Sbjct: 56  MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGT 94


>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 267/572 (46%), Gaps = 51/572 (8%)

Query: 2   FCSANSTIEDITELIRNHHWSKLKNTDPNTVILQ------------------LFNSDADP 43
           F   N    +I EL+ +H    LK  +P   +LQ                  L    ++ 
Sbjct: 61  FLPQNQNPFNIVELVSSH----LKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNF 116

Query: 44  VLILRYFCWSTKELR---ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST 100
           V  L +F W   +L    +SH+  L   ++H L  ++++P    FL   ++  K  S S 
Sbjct: 117 VSALAFFNWVKYDLDIRLSSHNYCL---IIHILAWSRQFPLAMKFLSELIELSKDVSSSE 173

Query: 101 -IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
            +F  L  C++    N +I +ML+ AYVK    H  + +FK+    G   +V++CN +L 
Sbjct: 174 DVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILN 233

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K         +Y+EM R  +  N  +FN +   LC+ G +NK +  +E M+  G  P
Sbjct: 234 GLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDP 293

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            VVTYN LID Y ++   G++  A  ++K M   G++P+ V++ +L+ G C+   +  A 
Sbjct: 294 DVVTYNTLIDSYVRR---GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAH 350

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           ++F  M   G+   VV YN+LI   C DG L EA +L  EM+  G+ P+  T   L+ G+
Sbjct: 351 QLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGY 410

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            ++  +  A  L  +I + G++ +   Y  LI + C+E R   A ++   +L+    PD 
Sbjct: 411 GREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDS 470

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             YN LI    R  NV     +  E++N   +    TY  L+  +C+  +S     L+ E
Sbjct: 471 DIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 530

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL---------------NELLEKGL- 503
           M + E     P+      L+ G+C++G  + A  LL               N L++    
Sbjct: 531 MVESE---VIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRD 587

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           + N+T    +++ M++ GF+P+     Y I G
Sbjct: 588 VGNETKLMELQDRMLKAGFLPNSLTCRYIIHG 619



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 38/342 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+ + V+ G+ ED  Y+YK M RR +  +L S+  ++ GLC+ G++ +A
Sbjct: 290 GFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREA 349

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VV YN LI  YCK G    + +A ++  +M+  GI P+  T   L
Sbjct: 350 HQLFHRMIDRGMDPDVVLYNTLIGAYCKDG---MLQEARSLLHEMIGIGIHPDSFTCRIL 406

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G+ ++  + +A+ +  E+   G+      Y  LI  LC + +   A +L + ++    
Sbjct: 407 VEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSF 466

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI-------------- 371
           +P+    N LI  FC+   V +A +L  ++  +   P+  TY +LI              
Sbjct: 467 QPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEG 526

Query: 372 ---------------------DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                + YCKEG  + A ++  S        D  ++N L+    
Sbjct: 527 LMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYR 586

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             GN   +  + + ++  G     +T   ++  + K  +  K
Sbjct: 587 DVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 628



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/336 (19%), Positives = 125/336 (37%), Gaps = 102/336 (30%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+ +YV+  +    F  +K     G+   ++S   L+R L + G+  +   ++  
Sbjct: 296 VTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHR 355

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R ++ ++  +N ++   CK G L +A  ++ +M  +G+ P   T  IL++GY ++G 
Sbjct: 356 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGR 415

Query: 237 I--------------------------------GKMYKADAVFKDMVENGILPNEVTFNT 264
           +                                 + + A ++ + ++E+   P+   +N 
Sbjct: 416 LISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNK 475

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI----------------------- 301
           LI+ FC+  N+S A+ +  EM +        TY SLI                       
Sbjct: 476 LIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESE 535

Query: 302 ------------NGLCVDGKLDEA-----------------------------------V 314
                       NG C +G  D+A                                   +
Sbjct: 536 VIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLM 595

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
            L+D M+ +G  PN +T   +I+G  K   + K RV
Sbjct: 596 ELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRV 631


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 213/401 (53%), Gaps = 11/401 (2%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F    RA    ++  + + + L     + G+ E     +  + +    +N    N +LNG
Sbjct: 75  FNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNG 134

Query: 196 LCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LC A ++++A DI+   M   G  P VV+ N L+ G C +    ++ +A  +   M E+G
Sbjct: 135 LCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEK---RVEEALELLHTMAEDG 191

Query: 255 ---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
                PN VT+NT+IDG CK + +  A  V + M   G+   VVTY+++I+GLC    +D
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD 251

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A  +   M+  G+KP+VVT N +I+G CK + V++A  +   + ++G+ P V+TYNT+I
Sbjct: 252 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 311

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D  CK   ++ A  +   M+D+ V PD+ TYNCLI G    G  + V   + E+   G+ 
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLD 371

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTY++L+  LCK+GK  +A  +    + M ++   PN+  Y +L+ G+  +G + D 
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIF---YCMIRKGIKPNVTIYGILLHGYAARGAIADL 428

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
             LL+ ++  G+ PN   + IV     +K  I D   H+++
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMI-DEAMHIFS 468



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 207/375 (55%), Gaps = 9/375 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR---RIELNLDSFNFVLNG 195
            +R  ++G   +V+SCN LL+ L  E + E+   +   M          N+ ++N +++G
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCKA  +++A  +++ M   GV   VVTY+ +IDG CK   +    +A+ V + M++ G+
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD---RAEGVLQHMIDKGV 265

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VT+NT+IDG CK + +  A  V + M   G+   VVTYN++I+GLC    +D A  
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   M+   +KP++ T N LI+G+      ++     +++  +GL P V+TY+ L+D  C
Sbjct: 326 VLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLC 385

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G+  +A  +   M+ +G+ P+V+ Y  L+ G +  G +  + ++++ +V NG+     
Sbjct: 386 KNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            +NI++ A  K     +A+ +     +M +    P++VTY +LI   C+ G+++DA    
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFS---RMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502

Query: 496 NELLEKGLIPNQTTY 510
           N+++  G+ PN   +
Sbjct: 503 NQMINDGVTPNSVVF 517



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 217/432 (50%), Gaps = 57/432 (13%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+K  V++ + ++  L K    +  E V + M  + ++ ++ ++N +++GLCKA  ++
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +++ M   GV P VVTYN +IDG CK   +    +AD V + M++  + P+  T+N
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD---RADGVLQHMIDKDVKPDIQTYN 343

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G+         ++  EEM + G+   VVTY+ L++ LC +GK  EA  +   M+  
Sbjct: 344 CLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRK 403

Query: 324 GLKPNVVTSNALING-----------------------------------FCKKKLVEKA 348
           G+KPNV     L++G                                   + KK ++++A
Sbjct: 404 GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEA 463

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +F  +S+ GLSP V+TY  LIDA CK GR++DA    N M++ GV P+   +N L+ G
Sbjct: 464 MHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYG 523

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L      E    +  E+ + G+R  +V +N ++  LC +G+   A  L+D    ME+   
Sbjct: 524 LCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS---MERVGV 580

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
            PN+++YN LI G C  G+ ++A  LL+ ++  GL P+  +Y  +               
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640

Query: 515 --EEMMEKGFIP 524
              EM+ KG  P
Sbjct: 641 LFREMLRKGVTP 652



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 227/455 (49%), Gaps = 19/455 (4%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P I+++   +H ++  G++  V      +   +  L  + +   +L+    KN K     
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMY--ARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F      G+K +V     LL      G   D+  +   M    I  N   FN VL   
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            K   +++A  I   M   G+SP VVTY ILID  CK   +G++  A   F  M+ +G+ 
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK---LGRVDDAVLKFNQMINDGVT 511

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN V FN+L+ G C  +    A ++F EM   G+   VV +N+++  LC +G++  A  L
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL 571

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D M   G++PNV++ N LI G C     ++A  L D +   GL P +I+Y+TL+  YCK
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GR+++A+ +   ML +GV P   TY+ ++ GL         + +   ++ +G +  + T
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEK----EKKWPNIVTYNVLIKGFCQKGKLEDAN 492
           YNI++  LCK        + +DE FK+ +    +   PNI+T+ ++I    + G+ +DA 
Sbjct: 692 YNIILNGLCK-------TNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            L   +   GL+PN  TY I+ + ++++G + + +
Sbjct: 745 DLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 201/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ N ++  L K    +  E V + M  + ++L++ +++ +++GLCKA  +++A  ++
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           + M   GV P VVTYN +IDG CK   + +   A+ V + M++ G+ P+ VT+NT+IDG 
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDR---AEGVLQHMIDKGVKPDVVTYNTIIDGL 314

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK + +  A  V + M    +   + TYN LI+G    G+  E V   +EM A GL P+V
Sbjct: 315 CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDV 374

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT + L++  CK     +AR +F  +  +G+ P+V  Y  L+  Y   G + D   + + 
Sbjct: 375 VTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDL 434

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+  G+ P+   +N ++   +++  ++   +I + +  +G+   +VTY IL+ ALCK G+
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              AV   ++M     +   PN V +N L+ G C   + E A  L  E+ ++G+ PN   
Sbjct: 495 VDDAVLKFNQMI---NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551

Query: 510 YQIVREEMMEKG 521
           +  +   +  +G
Sbjct: 552 FNTIMCNLCNEG 563



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 207/410 (50%), Gaps = 35/410 (8%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  +K  + + N L+   +  G++++V    +EM  R ++ ++ +++ +L+ LCK GK  
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  I   M   G+ P V  Y IL+ GY  +G I  +     +   MV NGI PN   FN
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD---LLDLMVANGISPNNYIFN 448

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++  + K   I  AM +F  M  HG++  VVTY  LI+ LC  G++D+AV   ++M+  
Sbjct: 449 IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND 508

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ PN V  N+L+ G C     EKA  LF ++ +QG+ P+V+ +NT++   C EG++  A
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + +SM   GV P+V +YN LI G    G  +    +++ +V+ G++  L++Y+ L+  
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628

Query: 444 LCKDGKSKKAVSLLDEMFK--------------------------------MEKEKKWPN 471
            CK G+   A  L  EM +                                M K  +  +
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I TYN+++ G C+   +++A  +   L  K L PN  T+ I+ + + + G
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 199/387 (51%), Gaps = 14/387 (3%)

Query: 149 SSVLSCNQLLRALVK---EGKFEDVEYVYKEMKR---RRIELNLDSFNFVLNGLCKAGKL 202
           +SV + N LL  + +       E    ++  M R    ++  +L +++ +    C+ G++
Sbjct: 47  ASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRI 106

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
                    +   G     V  N L++G C    + +    D + + M E G +PN V+ 
Sbjct: 107 EHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE--AMDILLRRMPEFGCMPNVVSC 164

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHG---IAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           NTL+ G C ++ +  A+++   M   G       VVTYN++I+GLC    +D A  +   
Sbjct: 165 NTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQH 224

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G+K +VVT + +I+G CK + V++A  +   + ++G+ P V+TYNT+ID  CK   
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ A  +   M+D+GV PDV TYN +I GL +   V+    ++  +++  ++  + TYN 
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+      G+ K+ V  L+EM+    +   P++VTY++L+   C+ GK  +A  +   ++
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLD---PDVVTYSLLLDYLCKNGKCTEARKIFYCMI 401

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDI 526
            KG+ PN T Y I+      +G I D+
Sbjct: 402 RKGIKPNVTIYGILLHGYAARGAIADL 428



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 227/493 (46%), Gaps = 63/493 (12%)

Query: 14  ELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
           E++R       +  DP+ V   L         +L Y C + K   A        ++ + +
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSL---------LLDYLCKNGKCTEAR-------KIFYCM 400

Query: 74  VVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           +     P +  +   LH +   G    ++ +   +   ++ +  N+ I ++++ AY K  
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV--ANGISPNNYIFNIVLCAYAKKA 458

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV-------------------- 170
                   F R   +GL   V++   L+ AL K G+ +D                     
Sbjct: 459 MIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518

Query: 171 ---------------EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
                          E ++ EM  + +  N+  FN ++  LC  G++  A  +++ M+ +
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           GV P V++YN LI G+C  G   +  +A  +   MV  G+ P+ ++++TL+ G+CK   I
Sbjct: 579 GVRPNVISYNTLIGGHCLAG---RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  +F EM   G+  G VTY++++ GL    +  EA  L   M+ SG + ++ T N +
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           +NG CK   V++A  +F  +  + L P++IT+  +ID   K GR +DA  +  S+   G+
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA-- 453
           +P+V TY  ++  + +EG ++   N+   +  +G     V  N ++ +L   G+  +A  
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815

Query: 454 -VSLLDEM-FKME 464
            +S +DEM F +E
Sbjct: 816 YLSKIDEMNFSLE 828



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 145/281 (51%), Gaps = 26/281 (9%)

Query: 278 AMKVFEEMG---SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           A+ +F  M    S+ +   + TY+ L    C  G+++   A    ++ +G + N V  N 
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 335 LINGFCKKKLVEKAR-VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           L+NG C  K V++A  +L   + E G  P+V++ NTL+   C E R+E+A  + ++M + 
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 394 G---VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           G     P+V TYN +I GL +   V+    ++  +++ G++  +VTY+ ++  LCK    
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  +L  M  ++K  K P++VTYN +I G C+   ++ A G+L  +++KG+ P+  TY
Sbjct: 251 DRAEGVLQHM--IDKGVK-PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 307

Query: 511 QI----------------VREEMMEKGFIPDIEGHMYNISG 535
                             V + M++K   PDI+ +   I G
Sbjct: 308 NTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV---EKARVLFDDISE---QGLSPS 363
           +D+A+ L DE++      +V   N L+N   + +     E A  LF+ ++      + P 
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM- 422
           + TY+ L   +C+ GR+E  FA    +L  G   +    N L+ GL     V+   +I+ 
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +   G    +V+ N L+  LC + + ++A+ LL  M +       PN+VTYN +I G 
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           C+   ++ A G+L  +++KG+  +  TY                  V + M++KG  PD+
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 527 EGHMYNISG 535
             +   I G
Sbjct: 270 VTYNTIIDG 278


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 217/425 (51%), Gaps = 46/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC- 197
           F++  D G+K +  + N L+   +  GK+++V  + ++M  R ++ +  ++  +LN LC 
Sbjct: 230 FQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCA 289

Query: 198 -------------------------------KAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                                          K G ++KA DI   M+  G+SP VV Y  
Sbjct: 290 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LID  CK   +G++  A+  F  M+  G+ PN V FN+L+ G C  +    A ++  EM 
Sbjct: 350 LIDALCK---LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 406

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             GI    V +N+LI  LC  G++ E   L D M   G++P+  +   LI+G+C     +
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  +FD +   GLSP+ +TYNTL+  YC   R++DA+ +   ML +GV P V TYN ++
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK- 465
            GL +       + +   ++N+G +  + TYNI++  LCK        + +DE FKM + 
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS-------NCVDEAFKMFQS 579

Query: 466 ---EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
              +    NI+T+ ++I    + G+ EDA  L   +   GL+PN  TY++V E ++E+G 
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639

Query: 523 IPDIE 527
           + + +
Sbjct: 640 LEEFD 644



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 189/375 (50%), Gaps = 13/375 (3%)

Query: 142 AGDYG--LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           A D+G     +V++   ++  L K   F+  E V+++M    ++ N D++N +++G    
Sbjct: 196 ANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSI 255

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPN 258
           GK  +   ++E M + G+ P   TY  L++  C    + +M+     F D MVENG+ P+
Sbjct: 256 GKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHS----FLDLMVENGLSPD 308

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              FN     + K   I  AM +F +M  HG++  VV Y +LI+ LC  G++D+A    +
Sbjct: 309 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 368

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M+  G+ PN+V  N+L+ G C     E+A  L  ++ +QG+ P+ + +NTLI   C  G
Sbjct: 369 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R+ +   + + M   GV PD  +Y  LI+G    G  +    + + +V+ G+    VTYN
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   C   +   A  L  EM    ++   P +VTYN ++ G  Q  +  +A  L   +
Sbjct: 489 TLLHGYCSASRIDDAYCLFREML---RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 499 LEKGLIPNQTTYQIV 513
           +  G   +  TY I+
Sbjct: 546 INSGTKCDIYTYNII 560



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 209/433 (48%), Gaps = 24/433 (5%)

Query: 81  KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           ++ SFL + V+NG                  L  +  I ++   AY K        + F 
Sbjct: 292 EMHSFLDLMVENG------------------LSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +   +GL  +V++   L+ AL K G+ +D E  + +M    +  N+  FN ++ GLC   
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           K  +A +++ +M   G+ P  V +N LI   C    +G++ +   +   M   G+ P+  
Sbjct: 394 KWERAEELVYEMLDQGICPNAVFFNTLICNLCN---VGRVMEGRRLIDLMEHVGVRPDAF 450

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++  LI G+C       A KVF+ M S G++   VTYN+L++G C   ++D+A  L  EM
Sbjct: 451 SYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 510

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G+ P VVT N +++G  + K   +A+ L+ ++   G    + TYN +++  CK   +
Sbjct: 511 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 570

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           ++AF M  S+  +G+  ++ T+  +I  L + G  E   ++   +  NG+   +VTY ++
Sbjct: 571 DEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 630

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
              L ++G  ++  SL      MEK    PN    N L++    +G +  A   L++L E
Sbjct: 631 AENLIEEGSLEEFDSLFS---AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 687

Query: 501 KGLIPNQTTYQIV 513
           +      +T  ++
Sbjct: 688 RNFSVEASTTSLL 700



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 11/333 (3%)

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           ++  N  +++ ++  LC+ G+L  +      +   G     +  N L+ G C    +G+ 
Sbjct: 93  KVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGE- 151

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS-HG--IAAGVVTY 297
              D + + M E G  P+ V+++ L+ GFC +     A+++   M + HG      VVTY
Sbjct: 152 -AMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            ++I+GLC     D A  +  +M+ +G+KPN  T N LI+G+      ++   + + +S 
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +GL P   TY +L++  C    M     +   M++ G+ PD   +N   +  ++ G ++ 
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             +I N++  +G+   +V Y  L+ ALCK G+   A    ++M     E   PNIV +N 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI---NEGVTPNIVVFNS 384

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L+ G C   K E A  L+ E+L++G+ PN   +
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 417



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 12/278 (4%)

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN  T++ LI   C+   +  +   F  +   G     +  N L+ GLC   ++ EA+
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 315 -ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA----RVLFDDISEQGLSPSVITYNT 369
             L   M   G  P+ V+ + L+ GFC +   E+A    R++ +D   +   P+V+TY T
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND-HGRSCPPNVVTYTT 212

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID  CK    + A  +   M+D GV P+  TYNCLI G    G  + V  ++ ++   G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++    TY  L+  LC   +     S LD M +       P+   +N+    + + G ++
Sbjct: 273 LKPDCYTYGSLLNYLCALSEMH---SFLDLMVE---NGLSPDHHIFNIFFSAYAKCGMID 326

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            A  + N++ + GL PN   Y  + + + + G + D E
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 59/299 (19%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLING---------------------------------- 303
           A+K+F+E+  H   A VV +N ++N                                   
Sbjct: 33  ALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRECSI 92

Query: 304 ---------------LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV-EK 347
                          LC  G+L  + A    ++ +G + N +  N L+ G C  K V E 
Sbjct: 93  KVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEA 152

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD---RGVLPDVSTYNC 404
             VL   + E G +P  ++Y+ L+  +C E R E+A  +   M +   R   P+V TY  
Sbjct: 153 MDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTT 212

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I GL +    +    +  ++++NG++    TYN L+      GK K+ V +L+   KM 
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE---KMS 269

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                P+  TY  L+   C    L + +  L+ ++E GL P+   + I      + G I
Sbjct: 270 ARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 325


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 216/431 (50%), Gaps = 42/431 (9%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           + D L+ A V+          F +    G+  S+ +   L+     +        +   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
            +   + N+ +FN ++NG C  G ++KA     D+ + G      +Y  LI+G CK G  
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNG-- 174

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            +   A  + + M E+ + PN +T++T+IDG CKD  I+ A+++F  + S GI   VV Y
Sbjct: 175 -QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAY 233

Query: 298 NSLING-----------------------------------LCVDGKLDEAVALRDEMMA 322
           NSLI+G                                   LC +G++ EA  +   MM 
Sbjct: 234 NSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMK 293

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G KP++VT NAL+ GFC    V +AR LF+ + ++GL P V+ YN LI+ YCK   +++
Sbjct: 294 RGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDE 353

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   +  + ++P+++TYN LI GL + G +  V+ +++E+ + G    +VTYNI + 
Sbjct: 354 AMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLD 413

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           A CK    +KA+SL    F+   +  WP+   Y+V+++ FC+  KL+ A   L  LL  G
Sbjct: 414 AFCKSKPYEKAISL----FRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469

Query: 503 LIPNQTTYQIV 513
             PN  TY I+
Sbjct: 470 CCPNVRTYTIM 480



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 196/390 (50%), Gaps = 23/390 (5%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S   L+  L K G+  D   + ++M+   +  NL +++ V++GLCK   +  A  +   
Sbjct: 161 FSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSL 220

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           + S G+   VV YN LI G C    +G+  +A  +   MV   I P++ TFN L+D  CK
Sbjct: 221 VTSRGILVDVVAYNSLIHGCC---SVGQWREATRLLTMMVRGNINPDDYTFNILVDALCK 277

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  I  A  VF  M   G    +VTYN+L+ G C+   + EA  L + M+  GL+P+V+ 
Sbjct: 278 EGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN 337

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LING+CK  +V++A VLF +I  + L P++ TYN+LID  CK GRM     + + M 
Sbjct: 338 YNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC 397

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           DRG  PD+ TYN  +    +    E   ++  ++V  G+      Y+++V   CK  K K
Sbjct: 398 DRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLK 456

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A   L  +         PN+ TY ++I   C+    ++A  LL+++ +    P+  T++
Sbjct: 457 IAEEALQHLLI---HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFE 513

Query: 512 IV----------------REEMMEKGFIPD 525
            +                R EM+E+G + D
Sbjct: 514 TIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 213/389 (54%), Gaps = 9/389 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           KN +     +  ++  +  ++ ++++ + ++  L K+    D   ++  +  R I +++ 
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +++G C  G+  +A+ ++  M    ++P   T+NIL+D  CK+G   ++ +A  VF
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEG---RIVEAQGVF 288

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M++ G  P+ VT+N L++GFC   N+S A ++F  M   G+   V+ YN LING C  
Sbjct: 289 AVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKI 348

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
             +DEA+ L  E+    L PN+ T N+LI+G CK   +   + L D++ ++G SP ++TY
Sbjct: 349 DMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTY 408

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N  +DA+CK    E A ++   ++ +G+ PD   Y+ ++    +   ++     +  L+ 
Sbjct: 409 NIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLI 467

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G    + TY I++ ALCKD    +A++LL    KM+     P+ VT+  +I    ++ +
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLS---KMDDNDCPPDAVTFETIIGALQERNE 524

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREE 516
            + A  L  E++E+GL+ ++   ++V E+
Sbjct: 525 TDKAEKLRLEMIERGLVNDEA--RLVHEQ 551



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 194/382 (50%), Gaps = 24/382 (6%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D    +  M R+     +  F+ +L  + + G    A  +   + S G++P + T  IL
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+ YC +  +   +   ++   +++ G  PN VTFNTLI+GFC +  +S AM    ++ +
Sbjct: 97  INCYCHQAHLSFAF---SLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA 153

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G      +Y SLINGLC +G+  +A+ L  +M    ++PN++T + +I+G CK +L+  
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIAD 213

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF  ++ +G+   V+ YN+LI   C  G+  +A  +   M+   + PD  T+N L+ 
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            L +EG +   + +   ++  G +  +VTYN L+   C      +A  L + M K   E 
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE- 332

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------Q 511
             P+++ YNVLI G+C+   +++A  L  E+  K L+PN  TY                Q
Sbjct: 333 --PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQ 390

Query: 512 IVREEMMEKGFIPDIEGHMYNI 533
            + +EM ++G  PDI    YNI
Sbjct: 391 ELVDEMCDRGQSPDIV--TYNI 410



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 183/357 (51%), Gaps = 18/357 (5%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  D LC++ +I D L L              F      G+   V++ N L+      G
Sbjct: 199 STVIDGLCKDRLIADALRL--------------FSLVTSRGILVDVVAYNSLIHGCCSVG 244

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++ +   +   M R  I  +  +FN +++ LCK G++ +A  +   M   G  P +VTYN
Sbjct: 245 QWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYN 304

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L++G+C    + +   A  +F  MV+ G+ P+ + +N LI+G+CK + +  AM +F+E+
Sbjct: 305 ALMEGFCLSNNVSE---ARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +   + TYNSLI+GLC  G++     L DEM   G  P++VT N  ++ FCK K  
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPY 421

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           EKA  LF  I  QG+ P    Y+ +++ +CK  +++ A      +L  G  P+V TY  +
Sbjct: 422 EKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIM 480

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           I  L ++ + +    +++++ +N      VT+  ++GAL +  ++ KA  L  EM +
Sbjct: 481 INALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIE 537



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 3/201 (1%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D+ +   + M+     P +   + L+    +      A  LF  +  +G++PS+ T   
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ YC +  +  AF++  ++L  G  P++ T+N LI G    G V        +L+  G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                 +Y  L+  LCK+G+++ A+ LL    KME++   PN++TY+ +I G C+   + 
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQ---KMEEDLVRPNLITYSTVIDGLCKDRLIA 212

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           DA  L + +  +G++ +   Y
Sbjct: 213 DALRLFSLVTSRGILVDVVAY 233


>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 267/572 (46%), Gaps = 51/572 (8%)

Query: 2   FCSANSTIEDITELIRNHHWSKLKNTDPNTVILQ------------------LFNSDADP 43
           F   N    +I EL+ +H    LK  +P   +LQ                  L    ++ 
Sbjct: 57  FLPQNQNPFNIVELVSSH----LKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNF 112

Query: 44  VLILRYFCWSTKELR---ASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST 100
           V  L +F W   +L    +SH+  L   ++H L  ++++P    FL   ++  K  S S 
Sbjct: 113 VSALAFFNWVKYDLDIRLSSHNYCL---IIHILAWSRQFPLAMKFLSELIELSKDVSSSE 169

Query: 101 -IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
            +F  L  C++    N +I +ML+ AYVK    H  + +FK+    G   +V++CN +L 
Sbjct: 170 DVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILN 229

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K         +Y+EM R  +  N  +FN +   LC+ G +NK +  +E M+  G  P
Sbjct: 230 GLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDP 289

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            VVTYN LID Y ++   G++  A  ++K M   G++P+ V++ +L+ G C+   +  A 
Sbjct: 290 DVVTYNTLIDSYVRR---GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAH 346

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           ++F  M   G+   VV YN+LI   C DG L EA +L  EM+  G+ P+  T   L+ G+
Sbjct: 347 QLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGY 406

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
            ++  +  A  L  +I + G++ +   Y  LI + C+E R   A ++   +L+    PD 
Sbjct: 407 GREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDS 466

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             YN LI    R  NV     +  E++N   +    TY  L+  +C+  +S     L+ E
Sbjct: 467 DIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 526

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL---------------NELLEKGL- 503
           M + E     P+      L+ G+C++G  + A  LL               N L++    
Sbjct: 527 MVESE---VIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRD 583

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           + N+T    +++ M++ GF+P+     Y I G
Sbjct: 584 VGNETKLMELQDRMLKAGFLPNSLTCRYIIHG 615



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 38/342 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N L+ + V+ G+ ED  Y+YK M RR +  +L S+  ++ GLC+ G++ +A
Sbjct: 286 GFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREA 345

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VV YN LI  YCK G    + +A ++  +M+  GI P+  T   L
Sbjct: 346 HQLFHRMIDRGMDPDVVLYNTLIGAYCKDG---MLQEARSLLHEMIGIGIHPDSFTCRIL 402

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G+ ++  + +A+ +  E+   G+      Y  LI  LC + +   A +L + ++    
Sbjct: 403 VEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSF 462

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI-------------- 371
           +P+    N LI  FC+   V +A +L  ++  +   P+  TY +LI              
Sbjct: 463 QPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEG 522

Query: 372 ---------------------DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                + YCKEG  + A ++  S        D  ++N L+    
Sbjct: 523 LMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYR 582

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             GN   +  + + ++  G     +T   ++  + K  +  K
Sbjct: 583 DVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 624



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/336 (19%), Positives = 125/336 (37%), Gaps = 102/336 (30%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+ +YV+  +    F  +K     G+   ++S   L+R L + G+  +   ++  
Sbjct: 292 VTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHR 351

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R ++ ++  +N ++   CK G L +A  ++ +M  +G+ P   T  IL++GY ++G 
Sbjct: 352 MIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGR 411

Query: 237 I--------------------------------GKMYKADAVFKDMVENGILPNEVTFNT 264
           +                                 + + A ++ + ++E+   P+   +N 
Sbjct: 412 LISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNK 471

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI----------------------- 301
           LI+ FC+  N+S A+ +  EM +        TY SLI                       
Sbjct: 472 LIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESE 531

Query: 302 ------------NGLCVDGKLDEA-----------------------------------V 314
                       NG C +G  D+A                                   +
Sbjct: 532 VIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLM 591

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
            L+D M+ +G  PN +T   +I+G  K   + K RV
Sbjct: 592 ELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRV 627


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 237/445 (53%), Gaps = 9/445 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H +  +G +   + +F  ++  S  L    +  +  M +  K+ +     E F+   
Sbjct: 339 AIIHGYSCSGHWKESAKMFRKMT--SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G    ++S + LL     EG+F D+  ++  M  + I  N   FN +++   K G ++
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +  +M+  GV P VVTY+ LI  +C+   +G++  A   F  M+  G+ PN V ++
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCR---MGRLADAMEKFSQMISIGLEPNTVVYH 513

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           +LI GFC   ++  A ++  EM S GI    +V ++S+I+ LC +G++ +A  + + ++ 
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G +P +VT N+LI+G+C    +EKA  + D +   G+ P V+TYNTL+  YCK G+++D
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDD 633

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              +   ML + V P   TY+ ++ GL   G     + + +E++++G    + TY IL+ 
Sbjct: 634 GLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 693

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC++  + +A++L  ++  M+ +    +I   N +I    +  + E+AN L   +   G
Sbjct: 694 GLCRNDLTDEAITLFHKLGAMDCKF---DITILNTVINALYKVRRREEANDLFAAISTSG 750

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIE 527
           L+PN +TY ++   ++++G + + +
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEAD 775



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 208/409 (50%), Gaps = 10/409 (2%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKR 179
           +LM    +  +P LG   F R    GL++  +  N  L+ L    +  E V+ +   M  
Sbjct: 161 ILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSD 220

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGI 237
                N  S+N V+  LC   +  +A D+++ M   G   SP VV++N +I G+ K+G +
Sbjct: 221 LGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEV 280

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            K   A  +  +MV+ G+ P+ VT+N+++D  CK   +  A  V  +M   G+    +TY
Sbjct: 281 SK---ACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            ++I+G    G   E+  +  +M + GL P +VT N+ ++  CK    + A  +F  ++ 
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTT 397

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G  P +++Y+ L+  Y  EGR  D   + +SM D+G++ +   +N LI+  ++ G ++ 
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDE 457

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E+   G+R  +VTY+ L+ A C+ G+   A+    +M  +  E   PN V Y+ 
Sbjct: 458 AMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE---PNTVVYHS 514

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKGFIPD 525
           LI GFC  G L  A  L++E++ KG+  PN   +  +   +  +G + D
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 161/315 (51%), Gaps = 3/315 (0%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +++  + ++ +L  EG+  D   V+  +        + +FN +++G C  GK+ KA  
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ M S+G+ P VVTYN L+ GYCK G   K+     +F++M+   + P  VT++ ++D
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSG---KIDDGLILFREMLHKKVKPTTVTYSIVLD 658

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G       SAA K+F EM   G A  + TY  L+ GLC +   DEA+ L  ++ A   K 
Sbjct: 659 GLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKF 718

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++   N +IN   K +  E+A  LF  IS  GL P+V TY  +I    KEG +E+A  M 
Sbjct: 719 DITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMF 778

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           +SM   G  P     N +I  L ++G++      M+++    +     T ++L+      
Sbjct: 779 SSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSK 838

Query: 448 GKSKKAVSLLDEMFK 462
           GK ++ +  L   ++
Sbjct: 839 GKHREQIKFLPAKYQ 853



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 15/263 (5%)

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           EE G       V TY  L++  C   + D   A    ++ +GL+   + +N  +   C  
Sbjct: 145 EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHA 204

Query: 343 KLVEKA-RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG--VLPDV 399
           K  ++A  VL   +S+ G  P+ I+YNT+I + C + R ++A  M   M   G    PDV
Sbjct: 205 KRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 264

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            ++N +I G  ++G V    N++NE+V  G+   +VTYN +V ALCK     KA  +L +
Sbjct: 265 VSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M     E   P+ +TY  +I G+   G  +++  +  ++  KGLIP   T+      + +
Sbjct: 325 MVDKGVE---PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCK 381

Query: 520 KGFIPDIE---------GHMYNI 533
            G   D E         GHM ++
Sbjct: 382 HGRSKDAEEIFQYMTTKGHMPDL 404


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 199/388 (51%), Gaps = 12/388 (3%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L FE   R G      SV +CN +LR L         + VY+ M    I   + +FN +L
Sbjct: 225 LSFEKMIRKG---FLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTML 281

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +   KAG L +   I  +MK   +    VTYNILI+G+ K G   KM +A     DM  +
Sbjct: 282 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSG---KMEEARRFHGDMQRS 338

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G      +FN LI+G+CK      A  V +EM + GI     TYN  I  LC  G++D+A
Sbjct: 339 GFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA 398

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                E+++S   P+VV+ N L++G+ K +   +A +LFDD+    ++PS++TYNTLID 
Sbjct: 399 ----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDG 454

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ G +E A  ++  M  + + PDV TY  L+ G  + GN+     I +E++  G++  
Sbjct: 455 LCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPD 514

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
              Y        + G S+KA  L +EM  + ++   P++  YNV I G C+ G LE A  
Sbjct: 515 GYAYTTRTVGELRLGDSEKAFRLHEEM--VAEDHHAPDLTIYNVRIDGLCKVGNLEKAIE 572

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
              ++   GL+P+  TY  V    +EKG
Sbjct: 573 FQRKIFRVGLVPDHVTYTTVIRGYLEKG 600



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 199/381 (52%), Gaps = 14/381 (3%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA +  GD    G   +  S N L+    K+G F++   V  EM    I     ++N  +
Sbjct: 327 EARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYI 386

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
             LC+ G+++ A +++  M     +P VV+YN L+ GY K   + K  +A  +F D+   
Sbjct: 387 RALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIK---MRKFVEASLLFDDLKAG 439

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+ VT+NTLIDG C+  N+  A ++ EEM S  I   V+TY +L+ G   +G L  A
Sbjct: 440 NINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMA 499

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLID 372
             + DEM+  G+KP+         G  +    EKA  L ++ ++E   +P +  YN  ID
Sbjct: 500 TEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRID 559

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK G +E A   +  +   G++PD  TY  +I G   +G  +  R++ +E+++  +  
Sbjct: 560 GLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP 619

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TY +L+    K G+ ++A     EM   +K    PN++T+N L+ G C+ G +++A 
Sbjct: 620 SVITYFVLIHGHAKAGRLEQAFQYSTEM---KKRGVRPNVMTHNALLHGMCKAGNIDEAY 676

Query: 493 GLLNELLEKGLIPNQTTYQIV 513
             L ++ E+G+ PN+ +Y I+
Sbjct: 677 RYLCKMEEEGISPNKYSYTIL 697



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 203/412 (49%), Gaps = 40/412 (9%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  +V++ N +L +  K G  E V+ ++ EMKRR IE +  ++N ++NG  K+GK+ +
Sbjct: 268 HGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEE 327

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A     DM+  G      ++N LI+GYCK+G   + +    V  +M+  GI P   T+N 
Sbjct: 328 ARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAW---GVTDEMLNAGIYPTTSTYNI 384

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            I   C+   I  A ++   M     A  VV+YN+L++G     K  EA  L D++ A  
Sbjct: 385 YIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGN 440

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P++VT N LI+G C+   +E A+ L ++++ Q + P VITY TL+  + K G +  A 
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMAT 500

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA-GLVTYNILVGA 443
            + + ML +G+ PD   Y     G  R G+ E    +  E+V     A  L  YN+ +  
Sbjct: 501 EIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDG 560

Query: 444 LCKDGKSKKAVSLLDEMFK--------------------------------MEKEKKWPN 471
           LCK G  +KA+    ++F+                                M  ++  P+
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++TY VLI G  + G+LE A     E+ ++G+ PN  T+  +   M + G I
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNI 672



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 176/331 (53%), Gaps = 7/331 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S N L+   +K  KF +   ++ ++K   I  ++ ++N +++GLC++G L  A  + E
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M S  + P V+TY  L+ G+ K G +     A  ++ +M+  GI P+   + T   G  
Sbjct: 470 EMTSQLIYPDVITYTTLLKGFVKNGNLSM---ATEIYDEMLRKGIKPDGYAYTTRTVGEL 526

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVT-YNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           +  +   A ++ EEM +    A  +T YN  I+GLC  G L++A+  + ++   GL P+ 
Sbjct: 527 RLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDH 586

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   +I G+ +K   + AR L+D++  + LSPSVITY  LI  + K GR+E AF     
Sbjct: 587 VTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTE 646

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  RGV P+V T+N L+ G+ + GN++     + ++   G+     +Y IL+   C   K
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDK 706

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            ++ V L  EM   E E   P+  T+  L K
Sbjct: 707 WEEVVKLYKEMLDKEIE---PDGYTHRALFK 734



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 149/301 (49%), Gaps = 25/301 (8%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+ M+  G LP+    N ++        ++ A +V+E M  HGI   V+T+N++++    
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+    +  EM    ++ + VT N LINGF K   +E+AR    D+   G   +  +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N LI+ YCK+G  ++A+ + + ML+ G+ P  STYN  I  L   G ++  R    EL+
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAR----ELL 402

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           ++     +V+YN L+    K  K  +A  L D+   ++     P+IVTYN LI G C+ G
Sbjct: 403 SSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDD---LKAGNINPSIVTYNTLIDGLCESG 459

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHM 530
            LE A  L  E+  + + P+  TY                  + +EM+ KG  PD  G+ 
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPD--GYA 517

Query: 531 Y 531
           Y
Sbjct: 518 Y 518



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 18/353 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM- 123
            R L S + A       + +H ++K  KF   S +F  L     + S+   + +ID L  
Sbjct: 398 ARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCE 457

Query: 124 ---LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
              L   + +K  +  +         +   V++   LL+  VK G       +Y EM R+
Sbjct: 458 SGNLEGAQRLKEEMTSQL--------IYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGK 239
            I+ +  ++     G  + G   KA  + E+M +    +P +  YN+ IDG CK   +G 
Sbjct: 510 GIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCK---VGN 566

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + KA    + +   G++P+ VT+ T+I G+ +      A  +++EM S  ++  V+TY  
Sbjct: 567 LEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFV 626

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G    G+L++A     EM   G++PNV+T NAL++G CK   +++A      + E+G
Sbjct: 627 LIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEG 686

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           +SP+  +Y  LI  +C   + E+   +   MLD+ + PD  T+  L   L ++
Sbjct: 687 ISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 739


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 231/451 (51%), Gaps = 24/451 (5%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDML 122
            HSL+  + +P   +F   +H     G      T+  ALST S      L  +++  + L
Sbjct: 197 FHSLIALRLHPNHYTFNLLVHTHCSKG------TLADALSTLSKMQGFGLSPDAVTYNTL 250

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           + A+ +            R    G+  +  + N L+ A  + G  +    V + M     
Sbjct: 251 LNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGF 310

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDG--YCKKGGIGK 239
           E +L ++N +  GLC+AGK+++A  + ++M+ LG VSP VVTYN L+D    C++     
Sbjct: 311 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS--- 367

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  + ++M E G+  + VT N ++ G C++  +  A+   E M   G+   V+TYN+
Sbjct: 368 --DALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNT 425

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+  C  G + +A  L DEM+ SGLK +  T N L+   CK+K  E+A  L     ++G
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P  ++Y T++ AY KE + E A  + + M+ R + P +STYN LI GLS  G +    
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           + +NEL+  G+     TYNI++ A CK+G  +KA    ++M  +E   K P++VT N L+
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM--VENSFK-PDVVTCNTLM 602

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            G C  G+LE A  L    +EKG   +  TY
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 209/420 (49%), Gaps = 23/420 (5%)

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           LA   +  P    +AF       L  +  + N L+     +G   D      +M+   + 
Sbjct: 182 LARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLS 241

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  ++N +LN  C+ G L +A  ++  MK  G+ P   TYN L+  Y + G I    +A
Sbjct: 242 PDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIK---QA 298

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI-AAGVVTYNSLIN 302
             V + M   G  P+  T+N L  G C+   +  A K+ +EM   GI +  VVTYN+L++
Sbjct: 299 TDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVD 358

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
                 +  +A+ L +EM   G+K ++VT N ++ G C++  +E+A    + ++E+GL+P
Sbjct: 359 ACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP 418

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            VITYNTLIDA CK G +  AF + + M+  G+  D  T N L+  L +E   E    ++
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
                 G     V+Y  ++ A  K+ K + A+ L DEM    K K  P+I TYN LIKG 
Sbjct: 479 RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMI---KRKLTPSISTYNTLIKGL 535

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
              GKL +A   LNEL+E GL+P+ TTY I+                  +M+E  F PD+
Sbjct: 536 STMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDV 595



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 217/435 (49%), Gaps = 65/435 (14%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N L+ A  K  +  D   + +EM+ + ++ +L + N ++ GLC+ G+L +A   +E
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMY----------------------------- 241
            M   G++P V+TYN LID  CK G + K +                             
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 469

Query: 242 ---KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              +A+ + +   + G +P+EV++ T++  + K+     A+ +++EM    +   + TYN
Sbjct: 470 RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYN 529

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI GL   GKL EA+   +E+M  GL P+  T N +I+ +CK+  +EKA    + + E 
Sbjct: 530 TLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
              P V+T NTL++  C  GR+E A  +  S +++G   DV TYN LI  L ++ +V+  
Sbjct: 590 SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA 649

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKS---KKAVSLLDEMFKMEKEKKWPNIVT- 474
                ++   G++  + TYN+L+ AL + G+S   +K +  L+E  K+     +P+I + 
Sbjct: 650 LRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSS 709

Query: 475 -----------------------------YNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                                        YN  IK  C  G+L++A  +L+E+++KG+  
Sbjct: 710 VEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSV 769

Query: 506 NQTTYQIVREEMMEK 520
           + +TY  + E ++++
Sbjct: 770 DNSTYITLMEGLIKR 784



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 205 ASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           A+ ++   +  G V P +   N ++    +          DA F  ++   + PN  TFN
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDA-FHSLIALRLHPNHYTFN 213

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+   C    ++ A+    +M   G++   VTYN+L+N  C  G L EA  L   M   
Sbjct: 214 LLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE 273

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P   T N L++ + +   +++A  + + ++  G  P + TYN L    C+ G++++A
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333

Query: 384 FAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           F +++ M   G++ PDV TYN L+    +        N++ E+   G+++ LVT+NI+V 
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVK 393

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC++G+ ++A+  L+    M +E   P+++TYN LI   C+ G +  A  L++E++  G
Sbjct: 394 GLCREGQLEEALGRLE---MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 503 L-----IPNQTTYQIVREEMME-----------KGFIPD 525
           L       N   Y + +E+  E           +GF+PD
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPD 489



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 39/342 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK    + N LL  L KE ++E+ E + +   +R    +  S+  V+    K  K   A
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M    ++P + TYN LI G      +GK+ +A     +++E G++P++ T+N +
Sbjct: 510 LCLWDEMIKRKLTPSISTYNTLIKGL---STMGKLTEAIDKLNELMEMGLVPDDTTYNII 566

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  +CK+ ++  A +   +M  +     VVT N+L+NGLC+ G+L++A+ L +  +  G 
Sbjct: 567 IHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK 626

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           K +V+T N LI   CK   V+ A   F D+  +GL P V TYN L+ A  + GR  +A  
Sbjct: 627 KVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQK 686

Query: 386 MRNSMLDRGVL---------------------PDV---------------STYNCLIAGL 409
           M + + + G L                     P+V                +YN  I  L
Sbjct: 687 MLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKEL 746

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
              G ++  + +++E++  GM     TY  L+  L K  K +
Sbjct: 747 CIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQ 788



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL     + N ++ A  KEG  E     + +M     + ++ + N ++NGLC  G+L 
Sbjct: 553 EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLE 612

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  + E     G    V+TYN LI   CK   +    +    F DM   G+ P+  T+N
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALR---FFADMEVRGLQPDVFTYN 669

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVV---------------------------- 295
            L+    +      A K+  ++   G   G                              
Sbjct: 670 VLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVG 729

Query: 296 --------TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
                   +YN  I  LC+ G+L EA A+ DEMM  G+  +  T   L+ G  K++
Sbjct: 730 NTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQ 785


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 220/414 (53%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C +++  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +V   M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKSV---MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M++    PN+VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKE---MQRXGYVPNVVT 418



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A ++ G   D    Y+  K  +  +  D+   V+  L K           E+    G
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
               +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++G+ K  ++ 
Sbjct: 132 YPASLYFFNILMHXFCKEGEI---RLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL PN VT   LI
Sbjct: 189 EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + + M  +G+ 
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G+S  A  +
Sbjct: 309 PDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKM 368

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           L EM  +  +   P I TY ++I   C+KG +   + LL E+   G +PN  T
Sbjct: 369 LREMLSVGLK---PEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG+ P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 IGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M    KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMI---KENIRXDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKG 395


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L   L++E  FE+    + +MKR R+     S N +L+   + GK +      +DM  
Sbjct: 67  DALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIG 126

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V TYNI+ID  CK+G I     A  +F++M   G++P+ VT+N++IDG+ K   
Sbjct: 127 AGSKPTVFTYNIMIDCMCKEGDI---EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +  FEEM S      V+TYN+LIN  C  GKL + +    EM  SGLKPNVV+ + 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+ ++++A   + D+   GL P+  TY +L+DAYCK G + DAF + + M   G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  +V TY  LI GL     ++    +  ++V  G+   L +Y  L+    K     +A+
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            LLDE   M+     P+++ Y   I   C   K+E A  ++NE+ EKG+  N   Y
Sbjct: 364 ELLDE---MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIY 416



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 235/451 (52%), Gaps = 20/451 (4%)

Query: 79  YPKIRS---FLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           +PK RS    LH F + GK   +   F  +  +    ++   +I+ID +     K     
Sbjct: 95  FPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCM----CKEGDIE 150

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
                F+     GL    ++ N ++    K G+ +D  Y ++EMK    E ++ ++N ++
Sbjct: 151 AASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLI 210

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N  CK GKL K  +   +MK  G+ P VV+Y+ L+D +CK+     M +A   + DM   
Sbjct: 211 NCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKED---MMQQALKFYVDMRRL 267

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G++PNE T+ +L+D +CK  N+S A ++ +EM   G+   VVTY +LI+GLC   ++ EA
Sbjct: 268 GLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEA 327

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L  +M+ +G+ PN+ +  ALI+GF K K +++A  L D++  +G+ P ++ Y T I +
Sbjct: 328 EELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWS 387

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C   ++E A  + N M ++G+  +   Y  L+    +  N     +++ E++   +   
Sbjct: 388 LCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVT 447

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEM---FKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            VT+ +L+  LCK+    KA+     +   F ++      N   Y  +I G C++ ++E 
Sbjct: 448 AVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQA-----NAAIYTAMIDGLCKEDQVEA 502

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           A  L  ++ +KGL+P++T Y  + +  +++G
Sbjct: 503 ATTLFEQMAQKGLVPDRTAYTSLIDGKLKQG 533



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 186/398 (46%), Gaps = 47/398 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G+       F  + + S   C   +I  + L+  + K  K   G E F+  
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMS---CEPDVITYNTLINCFCKFGKLPKGLEFFREM 229

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              GLK +V+S + L+ A  KE   +     Y +M+R  +  N  ++  +++  CK G L
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNL 289

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A  + ++M  +GV   VVTY  LIDG C    + ++ +A+ +F  MV  G++PN  ++
Sbjct: 290 SDAFRLADEMSQVGVEWNVVTYTALIDGLCD---VERIKEAEELFGKMVTAGVIPNLASY 346

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             LI GF K +N+  A+++ +EM   GI   ++ Y + I  LC   K++ A  + +EM  
Sbjct: 347 TALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQE 406

Query: 323 SGLKPNV-----------------------------------VTSNALINGFCKKKLVEK 347
            G+K N                                    VT   LI+G CK KLV K
Sbjct: 407 KGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSK 466

Query: 348 ARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           A   F  IS   GL  +   Y  +ID  CKE ++E A  +   M  +G++PD + Y  LI
Sbjct: 467 AIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLI 526

Query: 407 AGLSREGNVE---GVRNIMNEL-VNNGMRAGLVTYNIL 440
            G  ++GNV     +R+ M E+ V +G R G +  N +
Sbjct: 527 DGKLKQGNVVQALALRDKMAEIGVESGARFGDLCQNTI 564



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 3/260 (1%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
             N  +P    F+ L     +++    A++ F +M    +     + N L++     GK 
Sbjct: 55  TRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKT 114

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D       +M+ +G KP V T N +I+  CK+  +E A  LF+++  +GL P  +TYN++
Sbjct: 115 DGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSM 174

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID Y K GR++D       M      PDV TYN LI    + G +        E+  +G+
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +  +V+Y+ LV A CK+   ++A+    +M ++      PN  TY  L+  +C+ G L D
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRL---GLVPNEHTYTSLVDAYCKIGNLSD 291

Query: 491 ANGLLNELLEKGLIPNQTTY 510
           A  L +E+ + G+  N  TY
Sbjct: 292 AFRLADEMSQVGVEWNVVTY 311


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 249/526 (47%), Gaps = 80/526 (15%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           + L     LL TG+ + S+V+A       + +H +    +      IF    T  D L  
Sbjct: 265 EALHIKDELLATGKKM-SVVLAT------TLMHGYCLQREVRKALDIFE--ETLRDGLVP 315

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
             +   +L+    +   P   +E  ++  D+GL  S    N +++ L+ +  ++D   ++
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLF 375

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM    I  +  ++N +++ LC+  K+ +A ++ E M   GV P +VTY+ L+  YC  
Sbjct: 376 KEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVN 434

Query: 235 GGIG---KMY-----------------------------KADAVFKDMVENGILPNEVTF 262
           G +    K+Y                             KA A+  +M +NG+  N+ T+
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G C    +    ++ +   + G     +TYNS+ING    G +  A A+  +M A
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ PN+VT  + I+G+CK    + A  + +D+  +GL P +  YN+LI  +C+EG M  
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSH 614

Query: 383 AFAMRNSMLDRGVLPDVSTYN-----------------------------------CLIA 407
           A  +   ML  G+LP++S YN                                    LI 
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLID 674

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G S++GNV     + +E+V  G     +T+  L   LC++G    A  LLDEM +++   
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR- 733

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             PN++ YN+LI G+ + GKL++A  L +E+LE+ ++P+ TTY I+
Sbjct: 734 --PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 195/358 (54%), Gaps = 6/358 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L Y  N       + +      G   +V++   L++  + +  F+    +  EMK+  
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  N  ++N ++NGLC  G++ +  ++++  ++ G  P  +TYN +I+G+ K G +G  +
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
              AV++ M   GI PN VT+ + IDG+CK      A+K+  ++   G+   +  YNSLI
Sbjct: 547 ---AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G C +G +  A+ +   M+  GL PN+   N+ I G+   K++E+A  L++ + ++G+ 
Sbjct: 604 FGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGID 663

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
               TY TLID + K+G +  A  + + M+ +G +PD  T+  L  GL R G+++  R +
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++E+    +R  ++ YN+L+    ++GK ++A  L DEM    + K  P+  TY++L+
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML---ERKIMPDDTTYDILV 778



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 195/404 (48%), Gaps = 36/404 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            ++  D G      + N ++  LVK G+ E+  ++  E+     ++++     +++G C 
Sbjct: 235 LRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCL 294

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------------- 242
             ++ KA DI E+    G+ P  VTY +LI G  ++G   K Y+                
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354

Query: 243 ----------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                           A ++FK+M ++GI P+  T+N LI   C+   I  A+ ++E+M 
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMN 413

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   +VTY+SL+   CV+G +DEAV L  EM   G  PNVVT   L+ G   K   +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           KA  L  ++ + G+S +  TYNTLI+  C  GR+ +   M       G +P   TYN +I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  + G +     +  ++   G+   +VTY   +   CK      A+ +L++   +  +
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND---VRCK 590

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              P+I  YN LI GFCQ+G +  A  +L  +L+ GL+PN + Y
Sbjct: 591 GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 161/329 (48%), Gaps = 49/329 (14%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGL----KSSVLSCNQ-----LLRALVKEGKFEDVEYV 173
           ++ Y   MK H+   AF +A  Y L    K + +SCN      L+  L   G+  +V  +
Sbjct: 456 VVTYTTLMKGHINKAAFDKA--YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            K  +         ++N ++NG  KAG +  A  + + M + G+ P +VTY   IDGYCK
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV------------ 281
                   K   +  D+   G+ P+   +N+LI GFC++ N+S A++V            
Sbjct: 574 TSCCDLALK---MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 282 -----------------------FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
                                  +E+M   GI     TY +LI+G   DG +  A+ L  
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+A G  P+ +T  AL +G C+   ++ AR L D+++   + P+V+ YN LI+ Y + G
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           ++++AF + + ML+R ++PD +TY+ L+ 
Sbjct: 751 KLQEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 168/313 (53%), Gaps = 11/313 (3%)

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDG 268
           +M+  G       +++++    K+G    MY  DAV  F +M  + I P++   +  I  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEG----MYD-DAVRLFDEMPASEIEPDQRVCSVAIAS 221

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK  + + A+ V  +M   G      T+NS+++ L   G+++EA+ ++DE++A+G K +
Sbjct: 222 LCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMS 281

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV +  L++G+C ++ V KA  +F++    GL P+ +TY  LI    +EG  E A+ +  
Sbjct: 282 VVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M D G+LP  + +N +I GL  +   +   ++  E+ ++G+     TYNIL+  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRR 400

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K ++A++L +   KM +    P IVTY+ L+  +C  G +++A  L  E+  KG  PN  
Sbjct: 401 KIREALNLWE---KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 509 TYQIVREEMMEKG 521
           TY  + +  + K 
Sbjct: 458 TYTTLMKGHINKA 470



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 5/253 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++ F+K G   S   ++  +  C+  +  N +     +  Y K     L  +      
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQM--CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL+  + + N L+    +EG       V   M +  +  N+  +N  + G      + 
Sbjct: 589 CKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + E M   G+     TY  LIDG+ K G +    K   ++ +MV  G +P+ +TF 
Sbjct: 649 EALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALK---LYSEMVAKGNIPDHITFT 705

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L  G C++ +I  A K+ +EM    I   V+ YN LING   +GKL EA  L DEM+  
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 324 GLKPNVVTSNALI 336
            + P+  T + L+
Sbjct: 766 KIMPDDTTYDILV 778



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 90/295 (30%)

Query: 0   -----------------------------------                         
                                                                       
Sbjct: 166 AEMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLF                          200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 0                                                               
                                                                       
Sbjct: 200                                                              200

Query: 318 DEMMASGL                                                     325
           DEM AS +                                                    
Sbjct: 201 DEMPASEI                                                     208

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+    +  I   CK +   +A ++   + + G  P   T+N+++D   K GRME+A  
Sbjct: 209 EPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALH 268

Query: 386 MRNSMLDR-----------------------------------GVLPDVSTYNCLIAGLS 410
           +++ +L                                     G++P   TY  LI G +
Sbjct: 269 IKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCT 328

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
            EG  E    +  ++ ++G+      +N+++  L  D   K AVSL  EM     +   P
Sbjct: 329 EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM----ADSGIP 384

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           +  TYN+LI   CQ+ K+ +A  L  ++ E G+ P   TY                  + 
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444

Query: 515 EEMMEKGFIPDI 526
            EM  KGF P++
Sbjct: 445 TEMPGKGFTPNV 456



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 3/203 (1%)

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M A G+ P+  +   L+    +      A  L  ++  +G       ++ ++ A  KEG 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            +DA  + + M    + PD    +  IA L +  +      ++ ++ + G      T+N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +V  L K G+ ++A+ + DE+    K+    ++V    L+ G+C + ++  A  +  E L
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKM---SVVLATTLMHGYCLQREVRKALDIFEETL 309

Query: 500 EKGLIPNQTTYQIVREEMMEKGF 522
             GL+P   TY ++     E+G 
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGM 332


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 207/374 (55%), Gaps = 11/374 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+R   + G  E    V ++M       N    N V+N +CK G+++ A   + +M S
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P  ++Y  ++ G C+     +   A  + K+MV N   PNEVTFNT I   C+   
Sbjct: 346 YGCNPDTISYTTVLKGLCRAE---RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A+ + E+M  HG   GVVTYN+L+NG CV G +D A+ L   M     KPN +T   
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTT 459

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+ G C  + ++ A  L  ++  +   P+V+T+N L++ +C++G +++A  +   M++ G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P++ TYN L  G++++ + E    +++ LV+ G+   ++T++ ++G L K+ + ++A+
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 455 SLLDEMFKMEKE-KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
               +MF + ++    P  + YN ++ G C++ ++++A   L  ++  G +PN++TY I+
Sbjct: 580 ----QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIIL 635

Query: 514 REEMMEKGFIPDIE 527
            E +  +G + + +
Sbjct: 636 IEGLAREGLLKEAQ 649



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 189/365 (51%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V++   LL A+ K   FE    V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  + S G  P  V+Y  L+ G C      +    + +F +M+E   +PNEVTF+ L
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCAS---KRWDDVEELFAEMMEKNCMPNEVTFDML 288

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  FC+   +  A++V ++M  H  A      N +IN +C  G++D+A    + M + G 
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ ++   ++ G C+ +    A+ L  ++      P+ +T+NT I   C++G +E A  
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M + G    V TYN L+ G   +G+++    +   +     +   +TY  L+  LC
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLC 465

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
              +   A  L+ EM   +     PN+VT+NVL+  FCQKG L++A  L+ +++E G  P
Sbjct: 466 NAERLDAAAELVAEMLHRDCP---PNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522

Query: 506 NQTTY 510
           N  TY
Sbjct: 523 NLITY 527



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 47/400 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V  C +L+R L + G+  D   V +  +     +++ ++N ++ G C+ G L+ A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++    S+ V+P   TY  LI   C +G   ++  A ++  DM+  G  PN VT+  L
Sbjct: 130 RRLI---GSMPVAPDAYTYTPLIRVLCDRG---RVADALSLLDDMLRRGCQPNVVTYTVL 183

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++  CK+     AM V +EM + G    +VTYN +ING+C +G++D+A  L + + + G 
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY------------------ 367
           +P+ V+   L+ G C  K  +    LF ++ E+   P+ +T+                  
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 368 -----------------NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                            N +I++ CK+GR++DAF   N+M   G  PD  +Y  ++ GL 
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R       + ++ E+V N      VT+N  +  LC+ G  ++A+ L+++   M++     
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ---MQEHGCTV 420

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +VTYN L+ GFC +G ++ A  L   +  K   PN  TY
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITY 457



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 206/430 (47%), Gaps = 28/430 (6%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRS-FLHMFVKNGKFTSVS---- 99
           L+ R F +  +    S++ LL G     L  +K++  +   F  M  KN     V+    
Sbjct: 234 LLNRLFSYGCQPDTVSYTTLLKG-----LCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288

Query: 100 -----------TIFHALSTCSDSLC-RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
                           L   ++  C  N+ + ++++ +  K  +    F+     G YG 
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
               +S   +L+ L +  ++ D + + KEM R     N  +FN  +  LC+ G + +A  
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++E M+  G +  VVTYN L++G+C +G I     A  +F+ M      PN +T+ TL+ 
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS---ALELFRSM---PCKPNTITYTTLLT 462

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C  E + AA ++  EM        VVT+N L+N  C  G LDEA+ L ++MM  G  P
Sbjct: 463 GLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N++T N L +G  K    E A  L   +  +G+SP VIT++++I    KE R+E+A  M 
Sbjct: 523 NLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMF 582

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           +   D G+ P    YN ++ GL +   ++   + +  +V+NG      TY IL+  L ++
Sbjct: 583 HLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLARE 642

Query: 448 GKSKKAVSLL 457
           G  K+A  LL
Sbjct: 643 GLLKEAQDLL 652



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 163/332 (49%), Gaps = 9/332 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++  LC+ G+ + A+ ++   +  G    V  YN L+ GYC+ G +      DA  + + 
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL------DAARRLIG 134

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + P+  T+  LI   C    ++ A+ + ++M   G    VVTY  L+  +C +   +
Sbjct: 135 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFE 194

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+A+ DEM A G  PN+VT N +ING C++  V+ AR L + +   G  P  ++Y TL+
Sbjct: 195 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL 254

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              C   R +D   +   M+++  +P+  T++ LI    R G VE    ++ ++  +   
Sbjct: 255 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECA 314

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                 NI++ ++CK G+   A   L+ M         P+ ++Y  ++KG C+  +  DA
Sbjct: 315 TNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN---PDTISYTTVLKGLCRAERWNDA 371

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             LL E++     PN+ T+      + +KG I
Sbjct: 372 KELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 6/273 (2%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G  P+      LI   C+    S A +V       G    V  YN+L+ G C  G LD 
Sbjct: 69  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M    + P+  T   LI   C +  V  A  L DD+  +G  P+V+TY  L++
Sbjct: 129 ARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           A CK    E A A+ + M  +G  P++ TYN +I G+ REG V+  R+++N L + G + 
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQP 245

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             V+Y  L+  LC   +      L  EM  MEK    PN VT+++LI+ FC+ G +E A 
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEM--MEK-NCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +L ++ E     N T   IV   + ++G + D
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDD 335



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 7/242 (2%)

Query: 273 ENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           E+++ A ++ E   S  G A  V     LI  LC  G+  +A  +      SG   +V  
Sbjct: 53  EDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 112

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L+ G+C+   ++ AR L   I    ++P   TY  LI   C  GR+ DA ++ + ML
Sbjct: 113 YNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG  P+V TY  L+  + +    E    +++E+   G    +VTYN+++  +C++G+  
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A  LL+ +F    +   P+ V+Y  L+KG C   + +D   L  E++EK  +PN+ T+ 
Sbjct: 230 DARDLLNRLFSYGCQ---PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286

Query: 512 IV 513
           ++
Sbjct: 287 ML 288



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 31/236 (13%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDISEQGLSP-SVI 365
            +L E  A RD     G  P+V     LI   C++ +  + ARVL    +E   SP  V 
Sbjct: 59  ARLVELSASRD-----GEAPDVYLCTKLIRNLCRRGRTSDAARVL--RAAEGSGSPVDVF 111

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YNTL+  YC+ G ++ A  +  SM    V PD  TY  LI  L   G V    ++++++
Sbjct: 112 AYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 168

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           +  G +  +VTY +L+ A+CK+   ++A+++LDEM     +   PNIVTYNV+I G C++
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM---RAKGCTPNIVTYNVIINGMCRE 225

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
           G+++DA  LLN L   G  P+  +Y  + +                EMMEK  +P+
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  ++  ++G   ++++ N L   + K+   ED   +   +  + +  ++ +F+ ++ 
Sbjct: 508 AIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 567

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            L K  ++ +A  +    + +G+ PK + YN ++ G CK+  I     A      MV NG
Sbjct: 568 ILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDN---AIDFLAYMVSNG 624

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
            +PNE T+  LI+G  ++  +  A  +   + S G+ +
Sbjct: 625 CMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 216/399 (54%), Gaps = 25/399 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  V++   L+R L      +    + +EM    IE N+  ++ +L G CKAG+    
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S + E+M   G+ P VV Y  LID  C++   GK+ KA  V   M+E G+ PN VT+N L
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCRE---GKVKKATQVMDKMMERGLEPNVVTYNVL 259

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM--AS 323
           I+  CK+ ++  AM +   M   G+A   VTYN+LI GL    ++DEA+ L +EM+   +
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            ++PNVVT N++I+G CK   + +A  + D ++E G + +++T+N LI    +  +++ A
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M   G+ PD  TY+ LI G  +   V+   ++++++  +G+   LV Y  L+ A
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAA 439

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC+ G  ++A +  DEM K  K     ++V Y+ +I G C+    + A   L  +L++GL
Sbjct: 440 LCEQGMMEQARNFFDEMHKNCK----LDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDI 526
           IP+  TY +                V ++M   GF+PD+
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 208/378 (55%), Gaps = 9/378 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +   + G++ +V+  + LL+   K G++E V  V++EM  R IE ++  +  +++
Sbjct: 167 AVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ GK+ KA+ +M+ M   G+ P VVTYN+LI+  CK+G +    +A ++  +M+E G
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSV---KEAMSLRNNMLEKG 283

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +  + VT+NTLI G      +  AM + EEM  G   +   VVT+NS+I+GLC  G++ +
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  +RD M  +G   N+VT N LI G  +   V+KA  L D+++  GL P   TY+ LI+
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +CK  +++ A ++ + M   G+ P++  Y  L+A L  +G +E  RN  +E+  N  + 
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKL 462

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +V Y+ ++   C+    K A   L  M     E   P+ VTY++LI  F   G L  A 
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHML---DEGLIPDSVTYSMLINMFANSGDLGAAE 519

Query: 493 GLLNELLEKGLIPNQTTY 510
            +L ++   G +P+   +
Sbjct: 520 RVLKQMTASGFVPDVAVF 537



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 193/373 (51%), Gaps = 43/373 (11%)

Query: 188 SFNFVLNGLCKAG-----------------------------------KLNKASDIMEDM 212
           S+N VL  LC+ G                                   +  +A  ++ DM
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           ++ GV P VVTY  LI G C    +    KA  + ++M E+GI PN V ++ L+ G+CK 
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVD---KAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
                  KVFEEM   GI   VV Y  LI+ LC +GK+ +A  + D+MM  GL+PNVVT 
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML- 391
           N LIN  CK+  V++A  L +++ E+G++   +TYNTLI        M++A  +   M+ 
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 392 -DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            +  V P+V T+N +I GL + G +     + + +  NG    LVT+N+L+G L +  K 
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           KKA+ L+DEM     E   P+  TY++LI GFC+  +++ A  LL+++   G+ P    Y
Sbjct: 377 KKAMELMDEMASSGLE---PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHY 433

Query: 511 QIVREEMMEKGFI 523
             +   + E+G +
Sbjct: 434 IPLLAALCEQGMM 446



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 168/302 (55%), Gaps = 4/302 (1%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           + SL      V+YN ++   C++GG      A      ++ +   P  V++ TL+   C 
Sbjct: 69  LSSLPSVRDAVSYNTVLAALCRQGGC---LDAALFLLRVMAHETRPTAVSYTTLMRALCA 125

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +     A+ +  +M + G+   VVTY +LI GLC    +D+AV L  EM  SG++PNVV 
Sbjct: 126 ERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVV 185

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + L+ G+CK    E    +F+++S +G+ P V+ Y  LID+ C+EG+++ A  + + M+
Sbjct: 186 YSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMM 245

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +RG+ P+V TYN LI  + +EG+V+   ++ N ++  G+    VTYN L+  L    +  
Sbjct: 246 ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMD 305

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A+ LL+EM   E   + PN+VT+N +I G C+ G++  A  + + + E G   N  T+ 
Sbjct: 306 EAMGLLEEMIHGETMVE-PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFN 364

Query: 512 IV 513
           ++
Sbjct: 365 LL 366



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 11/302 (3%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++  N++I     L+ V  M   +G       G+  ++ +V++ N ++  L K G+   
Sbjct: 287 DAVTYNTLITG---LSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              V   M       NL +FN ++ GL +  K+ KA ++M++M S G+ P   TY+ILI+
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK   + ++ +A+++   M  +GI P  V +  L+   C+   +  A   F+EM  + 
Sbjct: 404 GFCK---MWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN- 459

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               VV Y+++I+G C       A      M+  GL P+ VT + LIN F     +  A 
Sbjct: 460 CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAE 519

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD---VST-YNCL 405
            +   ++  G  P V  +++LI  Y  +G  E    +   M  + +  D   +ST Y CL
Sbjct: 520 RVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCL 579

Query: 406 IA 407
           +A
Sbjct: 580 VA 581


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 206/381 (54%), Gaps = 6/381 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G + + ++   +L+ + K G+      + ++M+ R+I+L+   ++ +++GLCK G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            L+ A ++  +M+  G    ++ Y  LI G+C  G   +      + +DM++  I P+ V
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG---RWDDGAKLLRDMIKRKITPDVV 318

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            F+ LID F K+  +  A ++ +EM   GI+   VTY SLI+G C + +LD+A  + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G  PN+ T N LING+CK  L++    LF  +S +G+    +TYNTLI  +C+ G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E A  +   M+ R V PD+ +Y  L+ GL   G  E    I  ++  + M   +  YNI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +C   K   A  L      +  +   P++ TYN++I G C+KG L +A+ L  ++ E
Sbjct: 499 IHGMCNASKVDDAWDLF---CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  PN  TY I+    + +G
Sbjct: 556 DGHSPNGCTYNILIRAHLGEG 576



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 205/393 (52%), Gaps = 6/393 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   R  + G K ++++ N L+  L   GK  D   +   M     + N  ++  VL 
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK+G+   A +++  M+   +    V Y+I+IDG CK G +   +    +F +M   G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN---LFNEMEIKG 277

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              + + + TLI GFC         K+  +M    I   VV +++LI+    +GKL EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P+ VT  +LI+GFCK+  ++KA  + D +  +G  P++ T+N LI+ Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++D   +   M  RGV+ D  TYN LI G    G +E  + +  E+V+  +R  +
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y IL+  LC +G+ +KA+ + +   K+EK K   +I  YN++I G C   K++DA  L
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
              L  KG+ P+  TY I+   + +KG + + +
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 204/413 (49%), Gaps = 49/413 (11%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  ++  ++L   + +  +++ V  + K+M+ + I  NL + + ++N  C+  KL+ A  
Sbjct: 69  RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            M  +  LG  P  VT++ LI+G C +G   ++ +A  +   MVE G  P  +T N L++
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEG---RVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 268 GF-----------------------------------CKDENISAAMKVFEEMGSHGIAA 292
           G                                    CK    + AM++  +M    I  
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             V Y+ +I+GLC DG LD A  L +EM   G K +++    LI GFC     +    L 
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+ ++ ++P V+ ++ LID + KEG++ +A  +   M+ RG+ PD  TY  LI G  +E
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD---EMF-KMEKEKK 468
             ++   ++++ +V+ G    + T+NIL+   CK        +L+D   E+F KM     
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK-------ANLIDDGLELFRKMSLRGV 418

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + VTYN LI+GFC+ GKLE A  L  E++ + + P+  +Y+I+ + + + G
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 171/303 (56%), Gaps = 4/303 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ + L+   VKEGK  + E ++KEM +R I  +  ++  +++G CK  +L+KA+ +++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M S G  P + T+NILI+GYCK   I    +   +F+ M   G++ + VT+NTLI GFC
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLE---LFRKMSLRGVVADTVTYNTLIQGFC 433

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   +  A ++F+EM S  +   +V+Y  L++GLC +G+ ++A+ + +++  S ++ ++ 
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N +I+G C    V+ A  LF  +  +G+ P V TYN +I   CK+G + +A  +   M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            + G  P+  TYN LI     EG+      ++ E+   G      T  ++V  L  DG+ 
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRL 612

Query: 451 KKA 453
           KK+
Sbjct: 613 KKS 615



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 12/313 (3%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
           K + A D+ ++M      P+++ ++ L         + +  + D V    K M   GI  
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLF------SVVARTKQYDLVLDLCKQMELKGIAH 105

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T + +I+  C+   +S A     ++   G     VT+++LINGLC++G++ EA+ L 
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D M+  G KP ++T NAL+NG C    V  A +L D + E G  P+ +TY  ++   CK 
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+   A  +   M +R +  D   Y+ +I GL ++G+++   N+ NE+   G +A ++ Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+   C  G+      LL +M    K K  P++V ++ LI  F ++GKL +A  L  E
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMI---KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342

Query: 498 LLEKGLIPNQTTY 510
           ++++G+ P+  TY
Sbjct: 343 MIQRGISPDTVTY 355



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 3/229 (1%)

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           G V+Y   +    VD K D+AV L  EM  S  +P ++  + L +   + K  +    L 
Sbjct: 36  GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             +  +G++ ++ T + +I+  C+  ++  AF+    ++  G  PD  T++ LI GL  E
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G V     +++ +V  G +  L+T N LV  LC +GK   AV L+D M +   +   PN 
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ---PNE 212

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           VTY  ++K  C+ G+   A  LL ++ E+ +  +   Y I+ + + + G
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 225/451 (49%), Gaps = 59/451 (13%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+     G+   +++ N+L+  L ++G  ++ E +  ++ +R +  NL + N  + G 
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+   LN+A  +++ +   G++P V+TYN LI G CK     K+ +A+   + MV  G  
Sbjct: 262 CQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNF---KVVEAEHYLRKMVNEGYE 317

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+  T+N++IDG+CK   +  A ++  +    G      TY SLINGLC DG +D A+ +
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN-------- 368
            +E M  GLKPN+V  N L+ G  ++ L+ +A  L +++SE G SP + TYN        
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437

Query: 369 ---------------------------TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
                                      TLID YCK+ ++++A  + + M + GV PDV T
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN ++ GL + G  E V      ++  G    ++TYNIL  + CK  K ++A++L++E  
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE-- 555

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ-TTYQI-------- 512
            M+ +   P++V +  L+KGFC  G L+ A  L   + E+    +   TY I        
Sbjct: 556 -MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGK 614

Query: 513 --------VREEMMEKGFIPDIEGHMYNISG 535
                   +  +M E GF PD   +   I G
Sbjct: 615 LNMNMAEKLFNKMCENGFSPDSYTYRVMIDG 645



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 226/438 (51%), Gaps = 39/438 (8%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M ++ +  +PH            G +SS ++   ++    +E    +   +++EM    I
Sbjct: 153 MKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGI 212

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG------- 235
             ++ +FN +++ LC+ G + ++  ++  +   GVSP + T NI I G+C++        
Sbjct: 213 CPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR 272

Query: 236 ---GIG---------------------KMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
              G+G                     K+ +A+   + MV  G  P+  T+N++IDG+CK
Sbjct: 273 LLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A ++  +    G      TY SLINGLC DG +D A+ + +E M  GLKPN+V 
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L+ G  ++ L+ +A  L +++SE G SP + TYN +I+  CK G + DA  +    +
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI 452

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G LPDV T+N LI G  ++  ++    I++ + N+G+   ++TYN ++  LCK GK +
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512

Query: 452 KAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             +      FK+  EK   PNI+TYN+L + FC+  K+E+A  L+ E+  KGL P+   +
Sbjct: 513 DVMG----TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568

Query: 511 QIVREEMMEKGFIPDIEG 528
             + +   + G   D++G
Sbjct: 569 GTLMKGFCDNG---DLDG 583



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 222/427 (51%), Gaps = 24/427 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    NSII     L  ++N    L   AFK     G      +   L+  L ++G  + 
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFK-----GFVPDESTYCSLINGLCQDGDIDR 373

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              V+ E   + ++ NL   N ++ GL + G + +A  +M +M   G SP + TYN++I+
Sbjct: 374 AINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVIN 433

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK   IG +  AD +  D +  G LP+  TFNTLIDG+CK   +  A+++ + M +HG
Sbjct: 434 GLCK---IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           ++  V+TYNS++NGLC  GK ++ +     MM  G  PN++T N L   FCK + VE+A 
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD-VSTYNCLIAG 408
            L +++  +GL+P V+ + TL+  +C  G ++ A+ +   + ++      ++TYN +I  
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINA 610

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            + + N+     + N++  NG      TY +++   CK G      S L  + K+EK   
Sbjct: 611 FAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL--LVKIEK-GL 667

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN--QTTYQ----------IVREE 516
            P++ T+  ++   C K ++ +A G+++ ++ KG++P    T ++          IV E 
Sbjct: 668 IPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADKKEVAAPKIVVEN 727

Query: 517 MMEKGFI 523
           +M+KG I
Sbjct: 728 LMKKGHI 734



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 209/430 (48%), Gaps = 52/430 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N L+  L K  K  + E+  ++M     E +  ++N +++G CK G +  A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I+ D    G  P   TY  LI+G C+ G I +   A  VF + +E G+ PN V  NTL
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDR---AINVFNEAMEKGLKPNLVLCNTL 396

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  +   I  A+K+  EM  +G +  + TYN +INGLC  G + +A  L  + +A G 
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T N LI+G+CKK  ++ A  + D +   G+SP VITYN++++  CK G+ ED   
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMG 516

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
               M+++G +P++ TYN L     +   VE   N++ E+ N G+   +V +  L+   C
Sbjct: 517 TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC 576

Query: 446 KDGKSKKAVSL---LDEMFKMEK---------------------EKKW---------PNI 472
            +G    A  L   +DE +K                        EK +         P+ 
Sbjct: 577 DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDS 636

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------QIVREE------ 516
            TY V+I GFC+ G +      L   +EKGLIP+ TT+          + V E       
Sbjct: 637 YTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHL 696

Query: 517 MMEKGFIPDI 526
           M+ KG +P++
Sbjct: 697 MVHKGIVPEV 706



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 229/490 (46%), Gaps = 93/490 (18%)

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           M  Y +  K     + F+R   +  + SV S N ++  LV+   F+    VY  M+ + I
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142

Query: 183 ELNLDSFNFVLNGLCKAGK-------LN----------------------------KASD 207
             ++ +F   +   C+  +       LN                            +A +
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE 202

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           + E+M  LG+ P ++ +N LI   C+KG +    +++ +   +++ G+ PN  T N  I 
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHV---QESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC+   ++ A+++ + +G  G+   V+TYN+LI GLC + K+ EA     +M+  G +P
Sbjct: 260 GFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEP 318

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +  T N++I+G+CK  +++ A  +  D + +G  P   TY +LI+  C++G ++ A  + 
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK- 446
           N  +++G+ P++   N L+ GLS++G +     +MNE+  NG    + TYN+++  LCK 
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI 438

Query: 447 -----------------------------DGKSKK-----AVSLLDEMFKMEKEKKWPNI 472
                                        DG  KK     A+ ++D M+        P++
Sbjct: 439 GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW---NHGVSPDV 495

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EE 516
           +TYN ++ G C+ GK ED  G    ++EKG +PN  TY I+                 EE
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555

Query: 517 MMEKGFIPDI 526
           M  KG  PD+
Sbjct: 556 MQNKGLTPDV 565



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 43/418 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEY--------------------------------- 172
           G K ++L+   ++  L   G+FE +E                                  
Sbjct: 35  GFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQE 94

Query: 173 ---VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              V++ M     E ++ S+N ++N L +    ++A  +   M+  G+ P V T+ I + 
Sbjct: 95  AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMK 154

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            +C+     + + A  +  +M   G   + V + T+I GF ++ +   A ++FEEM   G
Sbjct: 155 SFCR---TSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   ++ +N LI+ LC  G + E+  L ++++  G+ PN+ T N  I GFC++ ++ +A 
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L D +  +GL+P VITYNTLI   CK  ++ +A      M++ G  PD  TYN +I G 
Sbjct: 272 RLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGY 330

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G ++    I+ +    G      TY  L+  LC+DG   +A+++ +E   MEK  K 
Sbjct: 331 CKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNE--AMEKGLK- 387

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           PN+V  N L+KG  Q+G +  A  L+NE+ E G  P+  TY +V   + + G + D +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDAD 445



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 25/340 (7%)

Query: 204 KASDIMEDMKSL-GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           KA +I   +K   G    ++TY  +I+     G    M +  A  +  ++NG+L  E  +
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL--EGVY 79

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
              +  + +   I  A+ VFE M        V +YN+++N L      D+A  +   M  
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P+V T    +  FC+      AR L +++  QG   S + Y T+I  + +E    +
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   ML  G+ PD+  +N LI  L R+G+V+    ++N+++  G+   L T NI + 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C+     +A+ LLD + +       P+++TYN LI G C+  K+ +A   L +++ +G
Sbjct: 260 GFCQRAMLNEAIRLLDGVGR----GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315

Query: 503 LIPNQTTY-----------------QIVREEMMEKGFIPD 525
             P+  TY                 QI+R+    KGF+PD
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF-KGFVPD 354


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 244/485 (50%), Gaps = 28/485 (5%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF------LHMFVKNGKFT 96
           P  +  +F +S+  L ++ +      L  S  + K  P+  S+       +  ++N    
Sbjct: 19  PARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGSYKLGDATFYRLIEN---Y 75

Query: 97  SVSTIFHALSTCSDSLCRNSIIID--MLMLAYVKNMKPHLGFEA---FKR-AGDYGLKSS 150
           + S  FH +    D + R   ++   + +L +    K HL  EA   F R A D   K +
Sbjct: 76  ATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQT 135

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           V S N +L  +++EG F      Y  +     +  + NL ++N ++  LCK G++++A D
Sbjct: 136 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF--KDMVENGILPNEVTFNTL 265
              +M     +P V TY+ L++G CK+  +      +AVF   +M   G LPN VTFN L
Sbjct: 196 TFREMPLKNCNPDVFTYSTLMNGLCKERRVD-----EAVFLLDEMQAEGCLPNPVTFNVL 250

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID   K+ ++S A K+ + M   G     VTYN+LI+GLC+ GKLD+A++L ++M++S  
Sbjct: 251 IDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKC 310

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN VT   +ING  K++  E    +   + E+G   +   Y++LI    KEG+ E+A  
Sbjct: 311 VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 370

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M ++G  P+V  Y   I GL R+   +   +I+ E+++ G      TY+ L+    
Sbjct: 371 LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFF 430

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G S+KA+ +  EM   +      N+V  +VL+ G C+ G+L +A  +   +L +GL P
Sbjct: 431 KKGDSQKAILVWKEMMSQDMRH---NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 487

Query: 506 NQTTY 510
           +   Y
Sbjct: 488 DVVAY 492



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 230/465 (49%), Gaps = 6/465 (1%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF-HALSTCSDSLCRNSIIIDMLMLAY 126
           R+ + L   +      S L++ ++ G F+     + H     S     N +  ++++ A 
Sbjct: 125 RMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKAL 184

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K  +     + F+          V + + L+  L KE + ++  ++  EM+      N 
Sbjct: 185 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 244

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +FN +++ L K G L++A+ ++++M   G  P  VTYN LI G C KG   K+ KA ++
Sbjct: 245 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG---KLDKALSL 301

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            + MV +  +PN+VT+ T+I+G  K       + +   M   G  A    Y+SLI+GL  
Sbjct: 302 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK 361

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +GK + AV L  EM   G KPNVV   A I+G C+ +  ++A  +  ++  +G  P+  T
Sbjct: 362 EGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFT 421

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y++L+  + K+G  + A  +   M+ + +  +V   + L+ GL   G +     +   ++
Sbjct: 422 YSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML 481

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++  +V Y+ ++  LC  G   K + L  EM + ++ K  P++VTYN+L    C++ 
Sbjct: 482 GEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM-QCQEPKSRPDVVTYNILFNALCRQD 540

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
            L  A  LLN +L++G  P+  T  I  E + E+   P  +G ++
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER-INPPQDGRLF 584



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 26/257 (10%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++    +    ++ KP    +  +     G   +  + + L++   K+G  +    V+
Sbjct: 383 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 442

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM  + +  N+   + +LNGLC++G+L +A  +   M   G+ P VV Y+ +I G C  
Sbjct: 443 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 502

Query: 235 GGIGKMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           G + K  K   +F +M   E    P+ VT+N L +  C+ +N++ A+ +   M   G   
Sbjct: 503 GSVDKGLK---LFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559

Query: 293 GVVTYNSLINGL------CVDGKL--DEAV-----------ALR--DEMMASGLKPNVVT 331
             +T N  +  L        DG+L  DE V           ALR  +EM+   L P   T
Sbjct: 560 DSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPST 619

Query: 332 SNALINGFCKKKLVEKA 348
            + +I   CK K + + 
Sbjct: 620 WSRVIQRTCKPKRIRET 636


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 210/387 (54%), Gaps = 9/387 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S+ + + L+RAL K  + +    ++ EM R     +   F  ++ GLC+AGK+  A
Sbjct: 110 GQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDA 169

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S+  + M   G  P V  YN+L+ G C  G   ++ +A+ +F +M  +   P+ VT+NTL
Sbjct: 170 SERFKQMPKHGCQPNVPVYNVLLHGLCSSG---QLEQANTLFAEMKSHSCSPDVVTYNTL 226

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK   +    K+FE M + G    V+T+++LI+GLC  G+L++A+ +   M+ +G 
Sbjct: 227 LDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 286

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPN  T   LI+G C+ + V +AR LF+ +++  + P  + YN+LI  YCK G M++A  
Sbjct: 287 KPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK 346

Query: 386 MRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           +   M    G+ P + T+N LI G  + G +     ++ E+   G+ A   TY IL+  L
Sbjct: 347 LYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            +  K  +A+    E++K  +EKK+  + V+    + G C+ G ++ A  +     + G 
Sbjct: 407 SRATKLDEAL----EVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 462

Query: 504 IPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +PN  T++I+ E +++ G + D +  M
Sbjct: 463 VPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 202/399 (50%), Gaps = 5/399 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N      ++ + VK  KP   ++  +     G    V + N +++   +    E    VY
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M     + +  S++ +++GL K GKL+++  I+ +M   G +P +  Y+ L+    K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A ++F +M+  G  P+ + F  LI G C+   +  A + F++M  HG    V
Sbjct: 129 R---RVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             YN L++GLC  G+L++A  L  EM +    P+VVT N L++  CK + VE+   LF+ 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G  P+VIT++TLI   C+ G +E A  +  SML+ G  P+  TY  LI+GL R   
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V   R +  ++    +    V YN L+   CK G   +A  L  EM         P IVT
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG--GAGLQPTIVT 363

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +N LI GFC+ GKL  AN L+ E+  KGL  +  TY+I+
Sbjct: 364 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRIL 402



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 197/400 (49%), Gaps = 19/400 (4%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM- 123
           ++L  +V+  + P ++++   +    K  +    S++F       D + R     D LM 
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLF-------DEMIRGGHHPDRLMF 153

Query: 124 ----LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
               L   +  K     E FK+   +G + +V   N LL  L   G+ E    ++ EMK 
Sbjct: 154 YELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKS 213

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                ++ ++N +L+ +CKA ++ +   + E M++ G  P V+T++ LI G C+    G+
Sbjct: 214 HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCR---TGE 270

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + KA  VF  M+E G  PN+ T+ TLI G C+ E +  A ++FE+M    I    V YNS
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 300 LINGLCVDGKLDEAVALRDEMMA-SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           LI G C  G +DEA  L  EM   +GL+P +VT N LI+GFCK   + +A  L  ++  +
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+    TY  LI    +  ++++A  +   M ++  L D  +    + GL + GN++  
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 450

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             +      +G      T+ IL  +L K G+ + A  L++
Sbjct: 451 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 6/359 (1%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M+ + I  N+ +++ ++  L K  K  ++  ++E+M + G +P V  +N ++ G+ +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN- 59

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
              M KA  V++ MVE+G  P+ V+++ LI G  K   +  ++K+  EM   G    +  
Sbjct: 60  --NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQA 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y+SL+  L    ++D A +L DEM+  G  P+ +    LI G C+   V+ A   F  + 
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           + G  P+V  YN L+   C  G++E A  +   M      PDV TYN L+  + +   VE
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +   +   G    ++T++ L+  LC+ G+ +KA+ +   M +   +   PN  TY 
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK---PNKYTYT 294

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            LI G C+  K+  A  L  ++ +  + P+   Y  +     ++G + + E     +SG
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 11/260 (4%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLM 123
           +L  ++  A   P + +F   +H   + G+      +F ++    ++ C+ N      L+
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML---EAGCKPNKYTYTTLI 297

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-I 182
               +  K     E F++     +    ++ N L+    K G  ++ E +Y+EM     +
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           +  + +FN +++G CK GKL +A++++ +M + G++    TY ILI G  +     K+ +
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT---KLDE 414

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  V+K M E   L + V+  + + G CK  NI  A  VFE     G      T+  L  
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 303 GLCVDGKLDEAVALRDEMMA 322
            L   G++++A  L +   A
Sbjct: 475 SLIKLGRVEDAQKLMEPAKA 494


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 244/485 (50%), Gaps = 28/485 (5%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF------LHMFVKNGKFT 96
           P  +  +F +S+  L ++ +      L  S  + K  P+  S+       +  ++N    
Sbjct: 43  PARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGSYKLGDATFYRLIEN---Y 99

Query: 97  SVSTIFHALSTCSDSLCRNSIIID--MLMLAYVKNMKPHLGFEA---FKR-AGDYGLKSS 150
           + S  FH +    D + R   ++   + +L +    K HL  EA   F R A D   K +
Sbjct: 100 ATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQT 159

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           V S N +L  +++EG F      Y  +     +  + NL ++N ++  LCK G++++A D
Sbjct: 160 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF--KDMVENGILPNEVTFNTL 265
              +M     +P V TY+ L++G CK+  +      +AVF   +M   G LPN VTFN L
Sbjct: 220 TFREMPLKNCNPDVFTYSTLMNGLCKERRVD-----EAVFLLDEMQAEGCLPNPVTFNVL 274

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID   K+ ++S A K+ + M   G     VTYN+LI+GLC+ GKLD+A++L ++M++S  
Sbjct: 275 IDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKC 334

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN VT   +ING  K++  E    +   + E+G   +   Y++LI    KEG+ E+A  
Sbjct: 335 VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 394

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M ++G  P+V  Y   I GL R+   +   +I+ E+++ G      TY+ L+    
Sbjct: 395 LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFF 454

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G S+KA+ +  EM   +      N+V  +VL+ G C+ G+L +A  +   +L +GL P
Sbjct: 455 KKGDSQKAILVWKEMMSQDMRH---NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 511

Query: 506 NQTTY 510
           +   Y
Sbjct: 512 DVVAY 516



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 230/465 (49%), Gaps = 6/465 (1%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF-HALSTCSDSLCRNSIIIDMLMLAY 126
           R+ + L   +      S L++ ++ G F+     + H     S     N +  ++++ A 
Sbjct: 149 RMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKAL 208

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K  +     + F+          V + + L+  L KE + ++  ++  EM+      N 
Sbjct: 209 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 268

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            +FN +++ L K G L++A+ ++++M   G  P  VTYN LI G C KG   K+ KA ++
Sbjct: 269 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG---KLDKALSL 325

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            + MV +  +PN+VT+ T+I+G  K       + +   M   G  A    Y+SLI+GL  
Sbjct: 326 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK 385

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +GK + AV L  EM   G KPNVV   A I+G C+ +  ++A  +  ++  +G  P+  T
Sbjct: 386 EGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFT 445

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y++L+  + K+G  + A  +   M+ + +  +V   + L+ GL   G +     +   ++
Sbjct: 446 YSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML 505

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++  +V Y+ ++  LC  G   K + L  EM + ++ K  P++VTYN+L    C++ 
Sbjct: 506 GEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM-QCQEPKSRPDVVTYNILFNALCRQD 564

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
            L  A  LLN +L++G  P+  T  I  E + E+   P  +G ++
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER-INPPQDGRLF 608



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 26/257 (10%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++    +    ++ KP    +  +     G   +  + + L++   K+G  +    V+
Sbjct: 407 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 466

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM  + +  N+   + +LNGLC++G+L +A  +   M   G+ P VV Y+ +I G C  
Sbjct: 467 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 526

Query: 235 GGIGKMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           G + K  K   +F +M   E    P+ VT+N L +  C+ +N++ A+ +   M   G   
Sbjct: 527 GSVDKGLK---LFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583

Query: 293 GVVTYNSLINGL------CVDGKL--DEAV-----------ALR--DEMMASGLKPNVVT 331
             +T N  +  L        DG+L  DE V           ALR  +EM+   L P   T
Sbjct: 584 DSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPST 643

Query: 332 SNALINGFCKKKLVEKA 348
            + +I   CK K + + 
Sbjct: 644 WSRVIQRTCKPKRIRET 660


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 18/400 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F R  D+ +K +V   N +L AL+ E +F+ +  +Y  MK+  +E N+ ++N +L 
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  +++ A  ++ +M S G  P  V+Y  LI   CK G + +  +    F       
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT------ 243

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+   +N LI+G CK+     A ++ +EM + GI   V++Y ++IN L   G ++ ++
Sbjct: 244 --PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           A+  +M A G  PN+ T  +LI GF  K    +A   +D +  +G+ P+V+ YN L+   
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C +  + DA ++ N M   G  P+V TY+ LI G ++ G+++G   + N ++ +G    +
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V Y  +V  LC++    +A  L++    M+ E   PN VT+N  IKG C  G+++ A  +
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIE---NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEK-------GFIPDIE 527
            +++   G  PN TTY  + + +++        G + D+E
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 187/380 (49%), Gaps = 8/380 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+      + G+  +V+S   ++ AL   G  E    V  +M  R    NL +F  ++ 
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIK 324

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G    G  ++A D  + M   GV P VV YN L+ G C K  +G    A +VF  M  NG
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGD---AVSVFNQMEING 381

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  T++ LIDG+ K  ++  A +V+  M +HG    VV Y  +++ LC +   ++A 
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L + M      PN VT N  I G C    V+ A  +FD +   G  P+  TYN L+D+ 
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K+ R  +AF +   M  RG+  ++ TYN +I G    G +     ++ ++V  G +   
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANG 493
           +T NI++ A CK GK   A+ L+D +       KW P+I+ Y  LI G C    +E+A  
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRL----SAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 494 LLNELLEKGLIPNQTTYQIV 513
            L  +L +G+ PN  T+ ++
Sbjct: 618 YLRRMLSEGISPNVATWNVL 637



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 3/334 (0%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H   + + R    G+  +V++ N L+  L  +    D   V+ +M+      N+ +++ +
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++G  KAG L+ AS++   M + G  P VV Y  ++D  C+     + Y    + ++M  
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY---CLIENMQV 449

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
               PN VTFNT I G C    +  A+KVF++MG+ G      TYN L++ L  D +  E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  +M   G++ N+VT N +I G+C   ++ +A  L   +  +G  P  IT N +ID
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           AYCK+G++  A  + + +      PD+  Y  LI+G+     VE     +  +++ G+  
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            + T+N+LV  L  +     AV  LD    M+ +
Sbjct: 630 NVATWNVLVRHLFSNMGHSGAVQFLDASSIMQPK 663



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 74/275 (26%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFH------------ALSTCSDSLCRNSIIIDMLML 124
           P +R++  +   + K G     S +++            A +   D LCRNS+      L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 125 ---AYVKNMKPH------------------LGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
                V+N  P+                     + F + G+ G   +  + N+LL +L+K
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFN--------------------------------- 190
           + +F +   + K+M+ R IELNL ++N                                 
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 191 --FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
              V++  CK GK+N A  +M+ + +    P ++ Y  LI G C   G+    +A    +
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE---EAIVYLR 620

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
            M+  GI PN  T+N L+     +   S A++  +
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 215/423 (50%), Gaps = 63/423 (14%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++  N++L +  K   +  V  + + ++ + I+ +  + N ++N  C  G++N A  ++ 
Sbjct: 63  IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKM-----------YKADAVFKDMVENGIL--- 256
            +   G  P  VT   LI G C KG + K            ++ D V    + NG+    
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182

Query: 257 ------------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
                             PN V +NT+ID  CK + +S A  +F EM   GI+A VVTY+
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYS 242

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           ++I+G C+ GKL EA+   +EM+   + P+V   N L++   K+  V++A+ +   I + 
Sbjct: 243 AIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKT 302

Query: 359 GLSPSVITYNTLIDAY---------------------------CKEGRMEDAFAMRNSML 391
            L P+VITYNTLID Y                           CK  R+E+A  +   M 
Sbjct: 303 CLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMH 362

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            + ++P+  TYN LI GL + G +    ++++E+ + G  A ++TYN L+  LCK+G+  
Sbjct: 363 QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLD 422

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK-LEDANGLLNELLEKGLIPNQTTY 510
           KA++L++   KM+ +   P++ T N+L+ G   KGK L++A GL  +LL+KG  PN  TY
Sbjct: 423 KAIALIN---KMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTY 479

Query: 511 QIV 513
            I+
Sbjct: 480 NII 482



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 243/488 (49%), Gaps = 49/488 (10%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
            H ++  +  P I  F   L  F K   + +V ++       S  L   +I  D   L  
Sbjct: 51  FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSL-------SRRLELKAIQPDFFTLNI 103

Query: 127 VKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           + N   HLG     F    +   +G +   ++   L++ L  +G+ +   + + ++  + 
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
             L+  S+  ++NG+CK G+   A  ++  +      P VV YN +ID  CK+  + +  
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE-- 221

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F +M   GI  N VT++ +I GFC    ++ A+    EM    I   V  YN+L+
Sbjct: 222 -ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF---------------------- 339
           + L  +GK+ EA  +   ++ + LKPNV+T N LI+G+                      
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNI 340

Query: 340 -----CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
                CK K VE+A  L+ ++ ++ + P+ +TYN+LID  CK GR+  A+ + + M DRG
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV-GALCKDGKSKKA 453
              +V TYN LI GL + G ++    ++N++ + G++  + T NIL+ G LCK  + K A
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNA 460

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L  ++     +   PN+ TYN++I G C++G L++A  L +++ + G  PN  T++I+
Sbjct: 461 QGLFQDLLD---KGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517

Query: 514 REEMMEKG 521
              ++EKG
Sbjct: 518 ICALLEKG 525



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 204/375 (54%), Gaps = 23/375 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  +R      + +V+  N ++  L K     +   ++ EM  + I  N+ +++ +++
Sbjct: 187 AIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIH 246

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  GKL +A   + +M    ++P V  YN L+D   K+G   K+ +A  V   +V+  
Sbjct: 247 GFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG---KVKEAKNVLAVIVKTC 303

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN +T+NTLIDG+ K         VF  +G  G+   V +YN +IN LC   +++EA+
Sbjct: 304 LKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEAL 355

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM    + PN VT N+LI+G CK   +  A  L D++ ++G   +VITYN+LI+  
Sbjct: 356 NLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGL 415

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG-NVEGVRNIMNELVNNGMRAG 433
           CK G+++ A A+ N M D+G+ PD+ T N L+ GL  +G  ++  + +  +L++ G    
Sbjct: 416 CKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPN 475

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMF----KMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           + TYNI++   CK+G       LLDE +    KME     PN +T+ ++I    +KG+ +
Sbjct: 476 VYTYNIIIYGHCKEG-------LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETD 528

Query: 490 DANGLLNELLEKGLI 504
            A  LL E++ +GL+
Sbjct: 529 KAEKLLCEMIARGLL 543



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 189/378 (50%), Gaps = 36/378 (9%)

Query: 163 KEGKFEDVE---YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           +   FE+V+   + +  M   R    +  FN +L+   K         +   ++   + P
Sbjct: 37  RPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQP 96

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
              T NILI+ +C    +G++  A +V   +++ G  P+ VT  TLI G C    +  A+
Sbjct: 97  DFFTLNILINCFCH---LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKAL 153

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
              +++ + G     V+Y +LING+C  G+   A+ L   +     +PNVV  N +I+  
Sbjct: 154 HFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCL 213

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           CK+KLV +A  LF ++S +G+S +V+TY+ +I  +C  G++ +A    N M+ + + PDV
Sbjct: 214 CKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDV 273

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT----------------------- 436
             YN L+  L +EG V+  +N++  +V   ++  ++T                       
Sbjct: 274 YIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTP 333

Query: 437 ----YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
               YNI++  LCK  + ++A++L  E   M ++   PN VTYN LI G C+ G++  A 
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKE---MHQKNMVPNTVTYNSLIDGLCKSGRISYAW 390

Query: 493 GLLNELLEKGLIPNQTTY 510
            L++E+ ++G   N  TY
Sbjct: 391 DLIDEMHDRGHHANVITY 408



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 133/247 (53%), Gaps = 12/247 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + L+  Y K++        F   G  G+   V S N ++  L K  + E+   +Y
Sbjct: 307 NVITYNTLIDGYAKHV--------FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLY 358

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEM ++ +  N  ++N +++GLCK+G+++ A D++++M   G    V+TYN LI+G CK 
Sbjct: 359 KEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKN 418

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG-FCKDENISAAMKVFEEMGSHGIAAG 293
              G++ KA A+   M + GI P+  T N L+ G  CK + +  A  +F+++   G    
Sbjct: 419 ---GQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPN 475

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V TYN +I G C +G LDEA AL+ +M  SG  PN +T   +I    +K   +KA  L  
Sbjct: 476 VYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLC 535

Query: 354 DISEQGL 360
           ++  +GL
Sbjct: 536 EMIARGL 542



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 7/276 (2%)

Query: 247 FKDMVENGILPN-EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           F   + N  LP     F++    F   EN+  A+  F  M        ++ +N +++   
Sbjct: 18  FPSFLPNPSLPKLHSHFHSRPPSF---ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFA 74

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
                   V+L   +    ++P+  T N LIN FC    +  A  +   I + G  P  +
Sbjct: 75  KMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTV 134

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T  TLI   C +G+++ A    + +L +G   D  +Y  LI G+ + G       ++  +
Sbjct: 135 TLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI 194

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
                   +V YN ++  LCK     +A +L  E   M  +    N+VTY+ +I GFC  
Sbjct: 195 DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSE---MSVKGISANVVTYSAIIHGFCIV 251

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           GKL +A G LNE++ K + P+   Y  + + + ++G
Sbjct: 252 GKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG 287


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 209/399 (52%), Gaps = 16/399 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL---------- 184
           G E  ++   +G +  ++S N +L+ L    +++DVE +  EM R    L          
Sbjct: 197 GVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTP 256

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +L  +  +++G+CK G    A+DI+  M S G+ P VV YN ++ G C      +  +A+
Sbjct: 257 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE---RWEEAE 313

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +  +M +     ++VTFN L+D FC++  +   +++ E+M  HG    V+TY ++ING 
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +G +DEAV L   M A G KPN ++   ++ G C+ +    A+ L   + +QG  P+ 
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+NTLI+  CK+G  E A  +   ML  G  PD+ +Y+ +I GL + G  E    ++N 
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++N G+    + Y+ +  AL ++G++ K + + D    ++      +   YN +I   C+
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFD---SIQDATVRSDAALYNAVISSLCK 550

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           + + + A      ++  G +PN++TY I+   +  +G +
Sbjct: 551 RWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 589



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 195/383 (50%), Gaps = 10/383 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  ++   C+ +L A  + G F       + +  +   L+  + N V++ +C+ G +++ 
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-------IGKMYKADAVFKDMVENGILPN 258
            +++  + S G  P +V+YN ++ G C           + +M +       M E+G  P+
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPD 257

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              + T+IDG CKD +   A  +   M S+G+   VV YN+++ GLC   + +EA  L  
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM       + VT N L++ FC+  LV++   L + + E G  P VITY T+I+ +CKEG
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 377

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++A  +  +M   G  P+  +Y  ++ GL R       + +++ ++  G     VT+N
Sbjct: 378 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 437

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  +CK G +++A+ LL +M         P++++Y+ +I G  + GK E+A  LLN +
Sbjct: 438 TLINFMCKKGLAEQAIELLKQML---VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 494

Query: 499 LEKGLIPNQTTYQIVREEMMEKG 521
           + KG+ PN   Y  +   +  +G
Sbjct: 495 INKGITPNTIIYSSMASALSREG 517



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 201/405 (49%), Gaps = 21/405 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST-----CSDSLCRNSIIIDMLM 123
           +L  L +AK++  +   +   V+         +  ALS      C+  L   + IID   
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVR---------VHEALSQMPEHGCTPDLRMYATIID--- 266

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K+    +  +   R   YGLK +V+  N +L+ L    ++E+ E +  EM +    
Sbjct: 267 -GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP 325

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++  C+ G +++  +++E M   G  P V+TY  +I+G+CK+G + +   A
Sbjct: 326 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE---A 382

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + K+M   G  PN +++  ++ G C+ E    A ++   M   G     VT+N+LIN 
Sbjct: 383 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 442

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           +C  G  ++A+ L  +M+ +G  P++++ + +I+G  K    E+A  L + +  +G++P+
Sbjct: 443 MCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y+++  A  +EGR +    M +S+ D  V  D + YN +I+ L +    +   +   
Sbjct: 503 TIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFA 562

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            +V+NG      TY IL+  L  +G  ++A  LL E+      +K
Sbjct: 563 YMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRK 607



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 165/357 (46%), Gaps = 22/357 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            + ++  LC AG+    +D    + + G +  VV YN +I GYC+ G +    +  A   
Sbjct: 47  LSALIRSLCAAGR---TADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
                 + PN  T+  ++   C    I+ A+ V +EM   G AA     + ++   C  G
Sbjct: 104 ------VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG 157

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
               AV     + A G   +    N +++  C++  V++   L   +   G  P +++YN
Sbjct: 158 GFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYN 217

Query: 369 TLIDAYCKEGRMEDAFAMR----------NSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            ++   C   R +D   +           + M + G  PD+  Y  +I G+ ++G+ E  
Sbjct: 218 AVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 277

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +I++ + + G++  +V YN ++  LC   + ++A  LL EMF   +E    + VT+N+L
Sbjct: 278 NDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF---QEDCPLDDVTFNIL 334

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           +  FCQ G ++    LL ++LE G IP+  TY  V     ++G + +    + N+S 
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 391


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 195/365 (53%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V++   LL A+ +   FE    V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  + S G  P  V+Y  L+ G C      +    + +F +M+E   +PNEVTF+ L
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCAS---KRWDDVEELFAEMMEKNCMPNEVTFDML 289

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  FC+   +  A++V E+M  HG A      N +IN +C  G++D+A  L ++M + G 
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGC 349

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ ++   ++ G C+ +  + A+ L +++      P+ +T+NT I   C++G +E A  
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 409

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M + G    V TYN L+ G   +G+++    +   +     +   +TY  L+  LC
Sbjct: 410 LIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLC 466

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
              +   A  L+ EM + +     PN+VT+NVL+  FCQKG LE+A  L+ +++E G  P
Sbjct: 467 NAERLDGAAELVAEMLRGDCP---PNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTP 523

Query: 506 NQTTY 510
           N  TY
Sbjct: 524 NLITY 528



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 215/426 (50%), Gaps = 44/426 (10%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF------- 189
           E   R   YG +   +S   LL+ L    +++DVE ++ EM  +    N  +F       
Sbjct: 234 ELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 293

Query: 190 ----------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
                                       N V+N +CK G+++ A  ++ DM S G +P  
Sbjct: 294 CRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDT 353

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           ++Y  ++ G C+     +   A  +  +MV N   PNEVTFNT I   C+   I  A+ +
Sbjct: 354 ISYTTVLKGLCRAE---RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 410

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E+M  HG   GVVTYN+L+NG CV G +D A+ L   M     KPN +T   L+ G C 
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCN 467

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + ++ A  L  ++      P+V+T+N L+  +C++G +E+A  +   M++ G  P++ T
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L+ G++++ + E    +++ LV+ G+   ++T++ ++G L K+ + ++AV L     
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLF---H 584

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ++     P  V YN ++ G C++ ++++A      ++  G +PN++TY I+ E +  +G
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644

Query: 522 FIPDIE 527
            + + +
Sbjct: 645 LLKEAQ 650



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 42/404 (10%)

Query: 140 KRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           +R+G   G    V  C +L+R L + G+  D   V +  +     +++ ++N ++ G C+
Sbjct: 64  ERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR 123

Query: 199 AGKLNKAS--------------------------------DIMEDMKSLGVSPKVVTYNI 226
            G L+ A                                  +++DM   G  P VVTY +
Sbjct: 124 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++  C+  G     +A AV  +M   G  PN VT+N +I+G C++  +  A ++   + 
Sbjct: 184 LLEAMCRNSGF---EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLP 240

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S+G     V+Y +L+ GLC   + D+   L  EMM     PN VT + LI  FC+  +VE
Sbjct: 241 SYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVE 300

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  + + ++E G + +    N +I++ CK+GR++DAF + N M   G  PD  +Y  ++
Sbjct: 301 RAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL R    +  + ++NE+V N      VT+N  +  LC+ G  ++A+ L+++   M + 
Sbjct: 361 KGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ---MSEH 417

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                +VTYN L+ GFC +G ++ A  L   +  K   PN  TY
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITY 458



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 168/332 (50%), Gaps = 9/332 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++  LC+ G+ + A+ ++   +  G    V  YN L+ GYC+ G +      DA  + + 
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL------DAARRLIG 135

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + P+  T+  LI   C    ++ A+ + ++M   G    VVTY  L+  +C +   +
Sbjct: 136 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFE 195

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+A+ DEM A G  PN+VT N +ING C++  V+ AR L + +   G  P  ++Y TL+
Sbjct: 196 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              C   R +D   +   M+++  +P+  T++ LI    R G VE    ++ ++  +G  
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCA 315

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                 NI++ ++CK G+   A  LL++M         P+ ++Y  ++KG C+  + +DA
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN---PDTISYTTVLKGLCRAERWDDA 372

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             LLNE++     PN+ T+      + +KG I
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLI 404



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 176/343 (51%), Gaps = 6/343 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+ + ++++ +  K  +    F+     G YG     +S   +L+ L +  +++D + + 
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R     N  +FN  +  LC+ G + +A  ++E M   G +  VVTYN L++G+C +
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G I     A  +F+ M      PN +T+ TL+ G C  E +  A ++  EM        V
Sbjct: 437 GHIDS---ALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNV 490

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+N L++  C  G L+EA+ L ++MM  G  PN++T N L++G  K    E A  L   
Sbjct: 491 VTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHG 550

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+SP VIT++++I    KE R+E+A  + + + D G+ P    YN ++ GL +   
Sbjct: 551 LVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE 610

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           ++   +    +V+NG      TY IL+  L  +G  K+A  LL
Sbjct: 611 IDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 6/273 (2%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G  P+      LI   C+    S A +V       G    V  YN+L+ G C  G LD 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M    + P+  T   LI   C +  V  A  L DD+  +G  P+V+TY  L++
Sbjct: 130 ARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           A C+    E A A+ + M  +G  P++ TYN +I G+ REG V+  R ++N L + G + 
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             V+Y  L+  LC   +      L  EM  MEK    PN VT+++LI+ FC+ G +E A 
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEM--MEK-NCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +L ++ E G   N T   IV   + ++G + D
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 6/185 (3%)

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           ++ L    R++    S  G +P V     LI   C+ GR  DA  +  +    G   DV 
Sbjct: 53  REDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 112

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            YN L+AG  R G+++  R ++  +    +     TY  L+  LC  G+   A+SLLD+M
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            +   +   PN+VTY VL++  C+    E A  +L+E+  KG  PN  TY ++   M  +
Sbjct: 170 LRRGCQ---PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 521 GFIPD 525
           G + D
Sbjct: 227 GRVDD 231


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 202/378 (53%), Gaps = 15/378 (3%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           FEA +R+    +  S  + + L+  LVK G       + +E       +++ ++  ++N 
Sbjct: 213 FEAVRRS----MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L K  K+ +A  +ME + + G +P + TYN L++G CK   +G++ +A  + + +V+NG 
Sbjct: 269 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK---MGRLEEAIDLLRKIVDNGC 325

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VT+ +LIDG  K++    A K+F+EM S G+A   V Y +LI GL   GK+ +A +
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASS 385

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +   M + G  P+VVT + +I+G  K   +  A  +F  +  +GL+P+ + Y+ LI   C
Sbjct: 386 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K  +M+ A  M   M      PD  TYN LI GL + G+VE  R   +E++  G +  + 
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYNIL+  LCK G +  A  +LD+M              Y+ L+ G C+ GKLE    L 
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSSSR--------FVYSSLVDGLCKSGKLEGGCMLF 557

Query: 496 NELLEKGLIPNQTTYQIV 513
           +E+   G+  +QT  +++
Sbjct: 558 HEMERSGVANSQTRTRLI 575



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 206/377 (54%), Gaps = 10/377 (2%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFVLNGLCKAGKLNKA 205
            +  V + N L+       + E+   V +EM+    +  +L + N VL+GLCK+GK+  A
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209

Query: 206 SDIMEDMK-SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            D  E ++ S+ VS    T++ILI+G  K G    M +A ++ ++   NG   +  T+  
Sbjct: 210 MDHFEAVRRSMPVS--AATFSILINGLVKAG---MMIQAHSLAQETTTNGCTIDIHTYTA 264

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +++   K++ I  A+ + E++ ++G    + TYN+L+NGLC  G+L+EA+ L  +++ +G
Sbjct: 265 IVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT  +LI+G  K+K   +A  LF +++ +GL+   + Y  LI    + G++  A 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++  +M   G +PDV T + +I GLS+ G +     I   +   G+    V Y+ L+  L
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK   ++K    L+ + +M+K    P+ +TYN+LI G C+ G +E A    +E+LE G  
Sbjct: 445 CK---ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 501

Query: 505 PNQTTYQIVREEMMEKG 521
           P+  TY I+   + + G
Sbjct: 502 PDVYTYNILISGLCKAG 518



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 185/362 (51%), Gaps = 14/362 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V++   L+  L KE +  +   ++KEM  R + L+   +  ++ GL + GK+ 
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS + + M S G  P VVT + +IDG  K G IG   +   +FK M   G+ PNEV ++
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR---IFKSMEARGLAPNEVVYS 438

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G CK   +  A+++  +M         +TYN LI+GLC  G ++ A A  DEM+ +
Sbjct: 439 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 498

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP+V T N LI+G CK    + A  + DD     +S S   Y++L+D  CK G++E  
Sbjct: 499 GCKPDVYTYNILISGLCKAGNTDAACGVLDD-----MSSSRFVYSSLVDGLCKSGKLEGG 553

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M +R  + +  T   LI  L +   V+   ++ N +   GM      YN ++ A
Sbjct: 554 CMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISA 611

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           L K GK  +  ++  EM +  K    P+ VTYN L+ G     +++ A+    E+  +G 
Sbjct: 612 LIKSGKVNEGQAVYQEMTRWWK----PDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667

Query: 504 IP 505
           +P
Sbjct: 668 VP 669



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 228/478 (47%), Gaps = 27/478 (5%)

Query: 23  KLKNTDPNTVILQLFNSDADPVLILRYF-CWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           +L+       ++++F    D  L    F C S+      HS+     LL      K++ +
Sbjct: 78  RLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHRE 137

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
             + L    KN     ++TIF            +    ++L+  Y    +P   F   + 
Sbjct: 138 AGNLL----KN----ELATIFRP----------DVETWNVLITGYCLAREPEEAFAVIRE 179

Query: 142 -AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
              D+G+  S+ + N +L  L K GK       + E  RR + ++  +F+ ++NGL KAG
Sbjct: 180 MEEDFGVAPSLKTHNLVLHGLCKSGKVL-AAMDHFEAVRRSMPVSAATFSILINGLVKAG 238

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            + +A  + ++  + G +  + TY  +++   K     K+ +A A+ + +  NG  P   
Sbjct: 239 MMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK---KIQEAVALMEKITANGCTPTIA 295

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+N L++G CK   +  A+ +  ++  +G    VVTY SLI+GL  + +  EA  L  EM
Sbjct: 296 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 355

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            + GL  + V   ALI G  +   + +A  ++  ++  G  P V+T +T+ID   K GR+
Sbjct: 356 ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 415

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +  SM  RG+ P+   Y+ LI GL +   ++    ++ ++         +TYNIL
Sbjct: 416 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 475

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +  LCK G  + A +  DEM +   +   P++ TYN+LI G C+ G  + A G+L+++
Sbjct: 476 IDGLCKSGDVEAARAFFDEMLEAGCK---PDVYTYNILISGLCKAGNTDAACGVLDDM 530



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 16/300 (5%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++C  ++I  +L    +           +K    +G    V++ + ++  L K G+   
Sbjct: 363 DTVCYTALIRGLLQTGKIPQAS-----SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              ++K M+ R +  N   ++ +++GLCKA K++ A +++  MK    +P  +TYNILID
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK G +     A A F +M+E G  P+  T+N LI G CK  N  AA  V ++M S  
Sbjct: 478 GLCKSGDV---EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                  Y+SL++GLC  GKL+    L  EM  SG+  N  T   LI   CK   V++A 
Sbjct: 535 F-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAV 588

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF+ I ++G+ P    YN++I A  K G++ +  A+   M  R   PD  TYN L+ G+
Sbjct: 589 SLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGM 646



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 11/310 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            ++ FK     GL    +    L+R L++ GK      VYK M       ++ + + +++
Sbjct: 348 AYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GL KAG++  A  I + M++ G++P  V Y+ LI G CK     KM  A  +   M +  
Sbjct: 408 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA---RKMDCALEMLAQMKKAF 464

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ +T+N LIDG CK  ++ AA   F+EM   G    V TYN LI+GLC  G  D A 
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D+M +S         ++L++G CK   +E   +LF ++   G++ S  T   LI   
Sbjct: 525 GVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQ-TRTRLIFHL 578

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  R+++A ++ N++   G +P    YN +I+ L + G V   + +  E+     +   
Sbjct: 579 CKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDR 636

Query: 435 VTYNILVGAL 444
           VTYN L+  +
Sbjct: 637 VTYNALLNGM 646



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 167/354 (47%), Gaps = 21/354 (5%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS--LGVSPKVVTYNILIDGYCKK 234
           + R R E++ D+   +   L  A   + A ++ + + S   G    V T N L+D + + 
Sbjct: 76  LDRLRREISTDAVVKIFQCLKDA---DLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR- 131

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAG 293
               +  +A  + K+ +     P+  T+N LI G+C       A  V  EM    G+A  
Sbjct: 132 --TKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPS 189

Query: 294 VVTYNSLINGLCVDGK----LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           + T+N +++GLC  GK    +D   A+R  M  S       T + LING  K  ++ +A 
Sbjct: 190 LKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSA-----ATFSILINGLVKAGMMIQAH 244

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L  + +  G +  + TY  +++   K  ++++A A+   +   G  P ++TYN L+ GL
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G +E   +++ ++V+NG    +VTY  L+  L K+ +S +A  L  EM         
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM---ASRGLA 361

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            + V Y  LI+G  Q GK+  A+ +   +   G +P+  T   + + + + G I
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 415



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 5/266 (1%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T N L+D F + +    A  + +   +      V T+N LI G C+  + +EA A+  EM
Sbjct: 121 TGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREM 180

Query: 321 MAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
               G+ P++ T N +++G CK   V  A   F+ +  + +  S  T++ LI+   K G 
Sbjct: 181 EEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKAGM 239

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M  A ++       G   D+ TY  ++  L++   ++    +M ++  NG    + TYN 
Sbjct: 240 MIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNA 299

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LCK G+ ++A+ LL    K+      P++VTY  LI G  ++ +  +A  L  E+ 
Sbjct: 300 LLNGLCKMGRLEEAIDLLR---KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPD 525
            +GL  +   Y  +   +++ G IP 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQ 382


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 253/494 (51%), Gaps = 17/494 (3%)

Query: 37  FNSDADPVLILRYFCWSTKELRAS-HSLLLTGRL--LHSLVVAKKYPKIRSF---LHMFV 90
           F+   D    +R FC   + LR   HSL     L     +V ++  P I  F   L++  
Sbjct: 24  FSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIA 83

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K  KF  V  +   L     S   +    ++LM  + ++ +P+L      +    G +  
Sbjct: 84  KMKKFDVVINLCDHLQIMGVS--HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPD 141

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++   L+       + E+   +  +M    I+ ++  +  +++ LCK G +N A  + +
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M++ G+ P VV Y  L++G C     G+   AD++ + M +  I P+ +TFN LID F 
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNS---GRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+     A +++ EM    IA  + TY SLING C++G +DEA  +   M   G  P+VV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
              +LINGFCK K V+ A  +F ++S++GL+ + ITY TLI  + + G+   A  + + M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN---NGMRAGLVTYNILVGALCKD 447
           + RGV P++ TYN L+  L   G V+    I  ++     +G+   + TYN+L+  LC +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK +KA+ + ++M K E +     I+TY ++I+G C+ GK+++A  L   L  KG+ PN 
Sbjct: 439 GKLEKALMVFEDMRKREMDIG---IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495

Query: 508 TTYQIVREEMMEKG 521
            TY  +   +  +G
Sbjct: 496 VTYTTMISGLFREG 509



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 188/358 (52%), Gaps = 20/358 (5%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  DSLC+N  +              +     F +  +YG++  V+    L+  L   G
Sbjct: 181 TTIIDSLCKNGHV--------------NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++ D + + + M +R+I+ ++ +FN +++   K GK   A ++  +M  + ++P + TY 
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI+G+C +G +    +A  +F  M   G  P+ V + +LI+GFCK + +  AMK+F EM
Sbjct: 287 SLINGFCMEGCVD---EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    +TY +LI G    GK + A  +   M++ G+ PN+ T N L++  C    V
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403

Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           +KA ++F+D+ ++   G++P++ TYN L+   C  G++E A  +   M  R +   + TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
             +I G+ + G V+   N+   L + G++  +VTY  ++  L ++G   +A  L  +M
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +  +A  +   M++   LP +  +  L+  +++    + V N+ + L   G+   L T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +L+   C+  +   A S L +M K+  E   P+IVT+  LI GFC   ++E+A  ++N++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFE---PDIVTFTSLINGFCLGNRMEEAMSMVNQM 168

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFI 523
           +E G+ P+   Y  + + + + G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHV 193


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 218/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F  +     +   +  +   L+ AY++
Sbjct: 7   MIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGLITAYLE 66

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 67  SGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYF 126

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 184

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ NG+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 185 -MLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNG 243

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +   M++  L P+++T N LI G CK   +++A  L D++S +GL P   TY 
Sbjct: 244 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYT 303

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       ++ E+++ 
Sbjct: 304 TLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSV 363

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++  + TY +++   CK G   K   LL E   M++    P++VTYNVL+ G
Sbjct: 364 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKE---MQRNGHAPSVVTYNVLMNG 413



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+A+G++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 172 LGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 231

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL + G+++   ++++E+ 
Sbjct: 232 FTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMS 291

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  FK  K     NI    V Y  LI G 
Sbjct: 292 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFKHRKRMIQENIRLDDVAYTALISGL 344

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 345 CQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 383



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   +L  L K         
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWG 110

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 167

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M ++G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 168 GYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP 227

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK G ++ A  + 
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLI 287

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 288 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQE 347

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+I TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 348 GQSVDAEKMLREMLSVGLK---PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSV 404

Query: 508 TTYQIV 513
            TY ++
Sbjct: 405 VTYNVL 410



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A V+F  I
Sbjct: 3   SYCTMIHFLCTHQMLSEA-------------------KSLIQLVVSRKGKGSASVVFATI 43

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +  +     T   ++  L +  
Sbjct: 44  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLR 103

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 104 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 157

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELF 217

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG IP+       I+GH  N
Sbjct: 218 DEMLVKGLIPNGVTFTTLIDGHCKN 242


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 217/393 (55%), Gaps = 23/393 (5%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L R ++++ K +D   ++ +M + R   ++  F+ +L+ + K  K +    + E M++LG
Sbjct: 46  LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +S  + TY+I I+ +C++    ++  A A+   M++ G  P+ VT N+L++GFC    IS
Sbjct: 106 ISHNLYTYSIFINYFCRRS---QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+ + ++M   G     VT+ +L++GL    K  EAVAL + M+  G +P++VT  A+I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG CK+   + A  L + + +  +   V+ YNT+ID  CK   M+DAF + N M  +G+ 
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV TYN LI+ L   G       ++++++   +   LV +N L+ A  K+GK  +A  L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY------ 510
            DEM K   +  +P++V YN LIKGFC+  ++E+   +  E+ ++GL+ N  TY      
Sbjct: 343 YDEMVK--SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 511 ----------QIVREEMMEKGFIPDIEGHMYNI 533
                     Q+V ++M+  G  PDI    YNI
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDI--MTYNI 431



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 7/379 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G +   ++   L+  L +  K  +   + + M  +  + +L ++  V+NGLCK G+ +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A +++  M+   +   VV YN +IDG CK      M  A  +F  M   GI P+  T+N
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCK---YKHMDDAFDLFNKMETKGIKPDVFTYN 289

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI   C     S A ++  +M    I   +V +N+LI+    +GKL EA  L DEM+ S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349

Query: 324 -GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
               P+VV  N LI GFCK K VE+   +F ++S++GL  + +TY TLI  + +    ++
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M+  GV PD+ TYN L+ GL   GNVE    +   +    M+  +VTY  ++ 
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           ALCK GK +    L      +  +   PN+VTY  ++ GFC+KG  E+A+ L  E+ E G
Sbjct: 470 ALCKAGKVEDGWDLF---CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526

Query: 503 LIPNQTTYQIVREEMMEKG 521
            +PN  TY  +    +  G
Sbjct: 527 PLPNSGTYNTLIRARLRDG 545



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 227/460 (49%), Gaps = 16/460 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L   +V ++ +P I  F   L    K  KF  V ++   +     S +L   SI I+   
Sbjct: 62  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY-- 119

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
             + +  +  L      +    G   S+++ N LL       +  +   +  +M     +
Sbjct: 120 --FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  +F  +++GL +  K ++A  ++E M   G  P +VTY  +I+G CK+G   +   A
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG---EPDLA 234

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +   M +  I  + V +NT+IDG CK +++  A  +F +M + GI   V TYN LI+ 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDISEQGLSP 362
           LC  G+  +A  L  +M+   + P++V  NALI+ F K+ KLVE  ++  + +  +   P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V+ YNTLI  +CK  R+E+   +   M  RG++ +  TY  LI G  +  + +  + + 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            ++V++G+   ++TYNIL+  LC +G  + A+ + +    M+K     +IVTY  +I+  
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE---YMQKRDMKLDIVTYTTMIEAL 471

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           C+ GK+ED   L   L  KG+ PN  TY  +      KG 
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 204/409 (49%), Gaps = 36/409 (8%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  KF+ V  + ++M+   I  NL +++  +N  C+  +L+ A  I+
Sbjct: 74  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT N L++G+C    I +   A A+   MVE G  P+ VTF TL+ G 
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISE---AVALVDQMVEMGYQPDTVTFTTLVHGL 190

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            +    S A+ + E M   G    +VTY ++INGLC  G+ D A+ L ++M    ++ +V
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N +I+G CK K ++ A  LF+ +  +G+ P V TYN LI   C  GR  DA  + + 
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM-RAGLVTYNILVGALCKDG 448
           ML++ + PD+  +N LI    +EG +     + +E+V +      +V YN L+   CK  
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370

Query: 449 KSKKAVSLLDEM-------------------------------FK-MEKEKKWPNIVTYN 476
           + ++ + +  EM                               FK M  +   P+I+TYN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +L+ G C  G +E A  +   + ++ +  +  TY  + E + + G + D
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 192/369 (52%), Gaps = 7/369 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++   ++  L K G+ +    +  +M++ +IE ++  +N +++GLCK   ++ A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+   M++ G+ P V TYN LI   C     G+   A  +  DM+E  I P+ V FN L
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCN---YGRWSDASRLLSDMLEKNINPDLVFFNAL 326

Query: 266 IDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ID F K+  +  A K+++EM  S      VV YN+LI G C   +++E + +  EM   G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L  N VT   LI+GF + +  + A+++F  +   G+ P ++TYN L+D  C  G +E A 
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  R +  D+ TY  +I  L + G VE   ++   L   G++  +VTY  ++   
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C+ G  ++A +L  EM   +++   PN  TYN LI+   + G    +  L+ E+   G  
Sbjct: 507 CRKGLKEEADALFVEM---KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563

Query: 505 PNQTTYQIV 513
            + +T+ +V
Sbjct: 564 GDASTFGLV 572



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 186/334 (55%), Gaps = 4/334 (1%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +P L      +     +++ V+  N ++  L K    +D   ++ +M+ + I+ ++ 
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +++ LC  G+ + AS ++ DM    ++P +V +N LID + K+G   K+ +A+ ++
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG---KLVEAEKLY 343

Query: 248 KDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            +MV++    P+ V +NTLI GFCK + +   M+VF EM   G+    VTY +LI+G   
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
               D A  +  +M++ G+ P+++T N L++G C    VE A V+F+ + ++ +   ++T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y T+I+A CK G++ED + +  S+  +GV P+V TY  +++G  R+G  E    +  E+ 
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +G      TYN L+ A  +DG    +  L+ EM
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 175/325 (53%), Gaps = 7/325 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ F +    G+K  V + N L+  L   G++ D   +  +M  + I  +L  FN +++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328

Query: 195 GLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
              K GKL +A  + ++M KS    P VV YN LI G+CK     ++ +   VF++M + 
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK---YKRVEEGMEVFREMSQR 385

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G++ N VT+ TLI GF +  +   A  VF++M S G+   ++TYN L++GLC +G ++ A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + + + M    +K ++VT   +I   CK   VE    LF  +S +G+ P+V+TY T++  
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +C++G  E+A A+   M + G LP+  TYN LI    R+G+      ++ E+ + G    
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565

Query: 434 LVTYNILVGALCKDGKSKKAVSLLD 458
             T+  LV  +  DG+  K  S LD
Sbjct: 566 ASTFG-LVTNMLHDGRLDK--SFLD 587



 Score = 45.1 bits (105), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 41/230 (17%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H F +     +   +F  +   SD +  + +  ++L+     N         F+   
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQM--VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              +K  +++   ++ AL K GK ED   ++  +  + ++ N+ ++  +++G C+ G   
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +  +MK  G  P   TYN                                      
Sbjct: 514 EADALFVEMKEDGPLPNSGTYN-------------------------------------- 535

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           TLI    +D + +A+ ++ +EM S G A    T+  L+  +  DG+LD++
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS 584


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 18/400 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F R  D+ +K +V   N +L AL+ E +F+ +  +Y  MK+  +E N+ ++N +L 
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  +++ A  ++ +M S G  P  V+Y  LI   CK G + +  +    F       
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT------ 243

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+   +N LI+G CK+     A ++ +EM + GI   V++Y ++IN L   G ++ ++
Sbjct: 244 --PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           A+  +M A G  PN+ T  +LI GF  K    +A   +D +  +G+ P+V+ YN L+   
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C +  + DA ++ N M   G  P+V TY+ LI G ++ G+++G   + N ++ +G    +
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V Y  +V  LC++    +A  L++    M+ E   PN VT+N  IKG C  G+++ A  +
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIE---NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEK-------GFIPDIE 527
            +++   G  PN TTY  + + +++        G + D+E
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 187/380 (49%), Gaps = 8/380 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+      + G+  +V+S   ++ AL   G  E    V  +M  R    NL +F  ++ 
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIK 324

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G    G  ++A D  + M   GV P VV YN L+ G C K  +G    A +VF  M  NG
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGD---AVSVFNQMEING 381

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  T++ LIDG+ K  ++  A +V+  M +HG    VV Y  +++ LC +   ++A 
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L + M      PN VT N  I G C    V+ A  +FD +   G  P+  TYN L+D+ 
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K+ R  +AF +   M  RG+  ++ TYN +I G    G +     ++ ++V  G +   
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANG 493
           +T NI++ A CK GK   A+ L+D +       KW P+I+ Y  LI G C    +E+A  
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRL----SAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 494 LLNELLEKGLIPNQTTYQIV 513
            L  +L +G+ PN  T+ ++
Sbjct: 618 YLRRMLSEGISPNVATWNVL 637



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 3/329 (0%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H   + + R    G+  +V++ N L+  L  +    D   V+ +M+      N+ +++ +
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++G  KAG L+ AS++   M + G  P VV Y  ++D  C+     + Y    + ++M  
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY---CLIENMQV 449

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
               PN VTFNT I G C    +  A+KVF++MG+ G      TYN L++ L  D +  E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  +M   G++ N+VT N +I G+C   ++ +A  L   +  +G  P  IT N +ID
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           AYCK+G++  A  + + +      PD+  Y  LI+G+     VE     +  +++ G+  
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMF 461
            + T+N+LV  L  +     AV  LD + 
Sbjct: 630 NVATWNVLVRHLFSNMGHSGAVQFLDAVL 658



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 139/287 (48%), Gaps = 3/287 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V + + L+    K G  +    V+  M       N+ ++  +++ LC+    N+A
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E+M+     P  VT+N  I G C   G G++  A  VF  M  +G  PN  T+N L
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLC---GSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D   KD     A  + ++M   GI   +VTYN++I G C  G L EA+ L  +M+  G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+ +T N +I+ +CK+  V  A  L D +S     P +I Y +LI   C    +E+A  
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
               ML  G+ P+V+T+N L+  L       G    ++ ++ +G   
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFET 664



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 39/283 (13%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFH------------ALSTCSDSLCRNSIIIDMLML 124
           P +R++  +   + K G     S +++            A +   D LCRNS+      L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 125 ---AYVKNMKPH------------------LGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
                V+N  P+                     + F + G+ G   +  + N+LL +L+K
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           + +F +   + K+M+ R IELNL ++N ++ G C AG L +A +++  M   G  P  +T
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
            NI+ID YCK+G   K+  A  +   +      P+ + + +LI G C    +  A+    
Sbjct: 564 VNIVIDAYCKQG---KVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR 620

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            M S GI+  V T+N L+  L  +     AV   D ++ SG +
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 225/443 (50%), Gaps = 44/443 (9%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
            L+T  + LC N  + D ++L                R  + G + + ++   +L  + K
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVL--------------IDRMVETGFQPNEVTYGPVLNVMCK 240

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+      + ++M+ R I+L+   ++ +++GLCK G L+ A ++  +M+  G    ++T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LI G+C  G   +      + +DM++  I PN VTF+ LID F K+  +  A ++ +
Sbjct: 301 YNTLIGGFCNAG---RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM   GIA   +TYNSLI+G C + +L+EA+ + D M++ G  P+++T N LING+CK  
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            ++    LF ++S +G+  + +TYNTL+  +C+ G++E A  +   M+ R V PD+ +Y 
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--- 460
            L+ GL   G +E    I  ++  + M   +  Y I++  +C   K   A  L   +   
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537

Query: 461 -FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-VR---- 514
             K++          YN++I   C+K  L  A+ L  ++ E+G  P++ TY I +R    
Sbjct: 538 GVKLDAR-------AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590

Query: 515 -----------EEMMEKGFIPDI 526
                      EEM   GF  D+
Sbjct: 591 DDDATTAAELIEEMKSSGFPADV 613



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 213/427 (49%), Gaps = 13/427 (3%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTC----SDSLCRNSIIIDMLML 124
           L   ++ ++  P +  F  +F    K      +   L+ C    S  +  +   + +++ 
Sbjct: 75  LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELV---LALCKQMESKGIAHSIYTLSIMIN 131

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +  K    F    +    G +   +  N LL  L  E +  +   +   M     + 
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            L + N ++NGLC  GK++ A  +++ M   G  P  VTY  +++  CK G   +   A 
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG---QTALAM 248

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M E  I  + V ++ +IDG CKD ++  A  +F EM   G  A ++TYN+LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+ D+   L  +M+   + PNVVT + LI+ F K+  + +A  L  ++ ++G++P+ 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITYN+LID +CKE R+E+A  M + M+ +G  PD+ T+N LI G  +   ++    +  E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G+ A  VTYN LV   C+ GK + A  L  EM      +  P+IV+Y +L+ G C 
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV---SRRVRPDIVSYKILLDGLCD 485

Query: 485 KGKLEDA 491
            G+LE A
Sbjct: 486 NGELEKA 492



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 210/387 (54%), Gaps = 8/387 (2%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ +  L  E  ++  +  +K   +  + ++  L K+G  ++   ++ EM+ +  + ++ 
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N ++ G C AG+ +  + ++ DM    +SP VVT+++LID + K+G   K+ +AD + 
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG---KLREADQLL 356

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K+M++ GI PN +T+N+LIDGFCK+  +  A+++ + M S G    ++T+N LING C  
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            ++D+ + L  EM   G+  N VT N L+ GFC+   +E A+ LF ++  + + P +++Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             L+D  C  G +E A  +   +    +  D+  Y  +I G+     V+   ++   L  
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKG 486
            G++     YNI++  LC+    K ++S  D +F KM +E   P+ +TYN+LI+      
Sbjct: 537 KGVKLDARAYNIMISELCR----KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
               A  L+ E+   G   + +T ++V
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMV 619



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 165/298 (55%), Gaps = 3/298 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ + VKEGK  + + + KEM +R I  N  ++N +++G CK  +L +A 
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M S G  P ++T+NILI+GYCK   I    +   +F++M   G++ N VT+NTL+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE---LFREMSLRGVIANTVTYNTLV 445

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   +  A K+F+EM S  +   +V+Y  L++GLC +G+L++A+ +  ++  S ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++     +I+G C    V+ A  LF  +  +G+      YN +I   C++  +  A  +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              M + G  PD  TYN LI     + +      ++ E+ ++G  A + T  +++  L
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 48/296 (16%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+ +F +M        V+ +N L + +    + +  +AL  +M + G+  ++ T + +IN
Sbjct: 72  AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            FC+ + +  A      I + G  P  + +NTL++  C E R+ +A  + + M++ G  P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            + T N L+ GL   G V     +++ +V  G +   VTY  ++  +CK G++  A+ LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 458 DEMF--------------------------------KMEKEKKWPNIVTYNVLIKGFCQK 485
            +M                                 +ME +    +I+TYN LI GFC  
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQI----------VRE------EMMEKGFIPD 525
           G+ +D   LL +++++ + PN  T+ +          +RE      EMM++G  P+
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R G +             G    V +CN +L A+  +G  ++  ++ +++  
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 220

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++ME+M  +   P +VT+N LI   C+ G   +
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   MVE+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 281 VHE---VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 337

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+ GLC   + +E   L  EM       + VT N L++ FC+  LV++   L + + E+G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL          
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++M++++  G     +T+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 514

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK ++A  LLN ++ KG+ PN   Y  +   +  +G I  +     NI  T+
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A +I+ 
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 321

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M S G+ P VV YN L+ G C      +  + + +  +M +     ++VTFN L+D FC
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAE---RWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +   +++ E+M   G    V+TY ++ING C +G +DEAV L   M A G KPN +
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           +   ++ G C  +    A  L   + +QG   + IT+NTLI+  CK+G +E A  +   M
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L  G  PD+ +Y+ +I GL + G  +    ++N +VN GM    + Y+ +  AL ++G+ 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            K + + D    ++      + V YN +I   C++G+ E A   L  ++  G +PN++TY
Sbjct: 559 NKVIQMFD---NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 511 QIVREEMMEKGFIPDIE 527
            I+   +  +GF+ + +
Sbjct: 616 TILIRGLASEGFVKEAQ 632



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 179/336 (53%), Gaps = 11/336 (3%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ G C+AG+L  A  +     ++ V P   TY  ++   C +G   ++  A AV  
Sbjct: 93  YNAMVAGYCRAGQLESARRLA---AAVPVPPNAYTYFPVVRALCARG---RIADALAVLD 146

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   G  P    ++ +++  C+     +A++V E++ + G A  V   N ++N +C  G
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +DEA+ L  ++ + G +P+VV+ NA++ G C  K     + L +++      P+++T+N
Sbjct: 207 SVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI   C+ G  E    +   M++ G  PD+  Y  +I G+ +EG++E    I+N + + 
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGK 487
           G++  +V YN L+  LC   + ++   LL EMF    +K  P + VT+N+L+  FCQ G 
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF----DKDCPLDDVTFNILVDFFCQNGL 382

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++    LL ++LE+G +P+  TY  V     ++G I
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 197/397 (49%), Gaps = 12/397 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   +    C+  +   + IID   
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIID--- 305

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N LL+ L    ++E+ E +  EM  +   
Sbjct: 306 -GICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 364

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++  C+ G +++  +++E M   G  P V+TY  +I+G+CK+G I +   A
Sbjct: 365 LDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDE---A 421

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + K M   G  PN +++  ++ G C  E    A  +  +M   G     +T+N+LIN 
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF 481

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G +++A+ L  +M+ +G  P++++ + +I+G  K    ++A  L + +  +G+SP+
Sbjct: 482 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y+++  A  +EGR+     M +++ D  +  D   YN +I+ L + G  E     + 
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +V++G      TY IL+  L  +G  K+A  +L E+
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 25/263 (9%)

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G   G V  +SLI  LC  G+  EA               VV  NA++ G+C+   +E A
Sbjct: 53  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESA 109

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R L   +    + P+  TY  ++ A C  GR+ DA A+ + M  RG  P    Y+ ++  
Sbjct: 110 RRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 166

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             R G       ++ +L   G    +   N+++ A+C  G   +A+ LL ++     E  
Sbjct: 167 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE-- 224

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---------------- 512
            P++V+YN ++KG C   +      L+ E++     PN  T+                  
Sbjct: 225 -PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283

Query: 513 VREEMMEKGFIPDIEGHMYNISG 535
           V  +M+E G  PDI  +   I G
Sbjct: 284 VLAQMVEHGCTPDIRMYATIIDG 306


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 216/431 (50%), Gaps = 44/431 (10%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+  Y +  +P L    F R    GL   V S N L+    KEG+ +    ++ +M  
Sbjct: 126 NILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIE 185

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + +  ++ ++N +++GLCK  ++ K+  ++E M   G+ P   TYN LI GY   G    
Sbjct: 186 QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAG---- 241

Query: 240 MYKADA-VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           M+K    VFK+M  +G++P  V  N+ I   C+   I  A  +F+ M   G    +++Y+
Sbjct: 242 MWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYS 301

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++G   +G      +L + M++ G+ PN    N LIN + +  +++KA ++F+D+  +
Sbjct: 302 TLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK 361

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG---------- 408
           G+ P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G          
Sbjct: 362 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKA 421

Query: 409 --------------------------LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
                                     L +EG V   ++IM+ +V  G R  +VT+N L+ 
Sbjct: 422 KELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLME 481

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C  G  ++A +LLD M  +  E   PN   Y  L+ G+C+ G+++DA  +  ++L KG
Sbjct: 482 GYCLVGNMEEAFALLDAMASIGIE---PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 538

Query: 503 LIPNQTTYQIV 513
           + P    Y I+
Sbjct: 539 VKPTSVLYNII 549



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 206/382 (53%), Gaps = 12/382 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +++S + LL     EG F ++  +   M  + I  N   FN ++N   + G ++KA
Sbjct: 292 GPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKA 351

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I EDM++ G+ P  VT+  +I   C+   IG++  A   F  MV+ G+ P+E  +  L
Sbjct: 352 MLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDDALHKFNHMVDIGVPPSEAVYRCL 408

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           I G C    +  A ++  EM +  I   GV  ++S+IN L  +G++ E   + D M+ +G
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTG 468

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +PNVVT N+L+ G+C    +E+A  L D ++  G+ P+   Y TL+D YCK GR++DA 
Sbjct: 469 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ML +GV P    YN ++ GL +       + + +E++ +G    + TY +++G L
Sbjct: 529 TVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C++  + +A  LL+++F M  +    +I+T+N++I    + G+ ++A  L   +   GL+
Sbjct: 589 CRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISAMLKVGRRQEAKELFAAISTYGLV 645

Query: 505 PNQTTY-----QIVREEMMEKG 521
           P   TY      +++EE  E+ 
Sbjct: 646 PTVHTYNLMISNLIKEESYEEA 667



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 176/297 (59%), Gaps = 12/297 (4%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKAD---AVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +P + TYNILID Y       +M++ +   AVF  ++  G+ P+  ++NTLIDGF K+  
Sbjct: 119 APTIYTYNILIDCY------RRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGE 172

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F +M    ++  VVTYNSLI+GLC   ++ ++  + ++M+ +G++PN  T N+
Sbjct: 173 VDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNS 232

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI G+    + +++  +F ++S  GL P V+  N+ I A C+  R+++A  + +SM+ +G
Sbjct: 233 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 292

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P++ +Y+ L+ G + EG    + +++N +V+ G+      +NIL+ A  + G   KA+
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            + ++   M+ +   P+ VT+  +I   C+ G+L+DA    N +++ G+ P++  Y+
Sbjct: 353 LIFED---MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYR 406



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++  L KEG+  + + +   M +     N+ +FN ++ G C  G + +A  +++ M S
Sbjct: 442 SSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 501

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P    Y  L+DGYCK G I     A  VF+DM+  G+ P  V +N ++ G  +   
Sbjct: 502 IGIEPNCYIYGTLVDGYCKNGRIDD---ALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +AA K+F EM   G    + TY  ++ GLC +   DEA  L +++ A  +K +++T N 
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I+   K    ++A+ LF  IS  GL P+V TYN +I    KE   E+A  +  S+   G
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD    N ++  L ++  V    N ++ +  N +     T ++L     ++GK ++ +
Sbjct: 679 RAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHI 738

Query: 455 SLLDEMFK 462
            LL   ++
Sbjct: 739 KLLPAKYQ 746



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 222/458 (48%), Gaps = 14/458 (3%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           +  S+V+    P I S+   LH +   G F +++++ + +   S  +  N    ++L+ A
Sbjct: 284 IFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM--VSKGIVPNHRFFNILINA 341

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y +          F+   + G+    ++   ++ +L + G+ +D  + +  M    +  +
Sbjct: 342 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 401

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NILIDGYCKKGGIGKMYKAD 244
              +  ++ G C  G+L KA +++ +M +  + P  V Y + +I+   K+G + +     
Sbjct: 402 EAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE---GK 458

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S GI      Y +L++G 
Sbjct: 459 DIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 518

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +G++D+A+ +  +M+  G+KP  V  N +++G  + +    A+ +F ++ E G + S+
Sbjct: 519 CKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSI 578

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  ++   C+    ++A  +   +    V  D+ T+N +I+ + + G  +  + +   
Sbjct: 579 QTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAA 638

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFC 483
           +   G+   + TYN+++  L K+   ++A    D +F  +EK  + P+    N +++   
Sbjct: 639 ISTYGLVPTVHTYNLMISNLIKEESYEEA----DNLFISVEKSGRAPDSRLLNHIVRMLL 694

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +K ++  A+  L+ + E  L    +T  ++      +G
Sbjct: 695 KKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREG 732


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 199/406 (49%), Gaps = 42/406 (10%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG K  V + N L+   +K  + E+   V   MK R    ++ ++N ++   C  GKL+ 
Sbjct: 133 YG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +I E++      P V+TY ILI+     GGI    K   +  +M+  G+ P+ +T+N 
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMK---LLDEMLSKGLEPDTLTYNA 248

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I G CK+  +  A ++   + S G    ++TYN L+  L   GK  E   L  EM++ G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            KPNVVT + LI   C+   VE+A  L   + E+GL P    Y+ LI  +C+EGR++ A 
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN--------------------- 423
                M+  G LPD+  YN ++AGL R G  +    +                       
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428

Query: 424 --------------ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
                         +L+N G+    +TYN L+  LC+DG   +A+ LL     M+  +  
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL---VDMQSGRYR 485

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           PN+V+YN+++ G C+  +  DA  +L  + EKG  PN+TTY ++ E
Sbjct: 486 PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 200/367 (54%), Gaps = 7/367 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V+ C +L++             V  E+  R  + ++ ++N +++G  KA +L 
Sbjct: 97  DKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKANQLE 155

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ +++ MKS G  P VVTYNI+I  +C +G   K+  A  +F++++++   P  +T+ 
Sbjct: 156 NANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG---KLDLALEIFEELLKDNCEPTVITYT 212

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+    D  I  AMK+ +EM S G+    +TYN++I G+C +  +D+A  L   + + 
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP+++T N L+     +    +   L  ++   G  P+V+T++ LI   C++G++E+A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +  SM ++G+ PD   Y+ LIAG  REG ++     +  ++++G    +V YN ++  
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC+ GK+ +A+ + +   K+++    PN+ +YN L       G    A  ++ +LL +G+
Sbjct: 393 LCRTGKADQALEVFE---KLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449

Query: 504 IPNQTTY 510
            P++ TY
Sbjct: 450 DPDEITY 456



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 187/366 (51%), Gaps = 7/366 (1%)

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           +LL    + GK+ +  Y  + M  +    ++     ++ G   +  + KA+ +ME ++  
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G  P V  YN LI G+ K     ++  A+ V   M   G LP+ VT+N +I  FC    +
Sbjct: 134 G-KPDVFAYNALISGFIKAN---QLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+++FEE+        V+TY  LI    +DG +D A+ L DEM++ GL+P+ +T NA+
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G CK+ +V+KA  L   +S +G  P +ITYN L+      G+  +   + + M+  G 
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            P+V T++ LI  L R+G VE   N++  +   G++     Y+ L+   C++G+   A  
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            L+ M     +   P+IV YN ++ G C+ GK + A  +  +L E G  PN ++Y  +  
Sbjct: 370 FLEYMI---SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFS 426

Query: 516 EMMEKG 521
            +   G
Sbjct: 427 ALWSSG 432



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 205/410 (50%), Gaps = 8/410 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F+K  +  + + +   +   S     + +  ++++ ++    K  L  E F+       +
Sbjct: 148 FIKANQLENANRVLDRMK--SRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCE 205

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V++   L+ A + +G  +    +  EM  + +E +  ++N ++ G+CK   ++KA ++
Sbjct: 206 PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL 265

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +  + S G  P ++TYNIL+     +G   K  + + +  +M+  G  PN VT + LI  
Sbjct: 266 LRSLSSRGCKPDIITYNILLRTLLSRG---KWSEGEKLISEMISIGCKPNVVTHSILIGT 322

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+D  +  A+ +   M   G+      Y+ LI G C +G+LD A    + M++ G  P+
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +V  N ++ G C+    ++A  +F+ + E G  P+V +YNTL  A    G    A  M  
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            +L++G+ PD  TYN LI+ L R+G V+    ++ ++ +   R  +V+YNI++  LCK  
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ++  A+ +L     M ++   PN  TY +LI+G    G   +A  L N L
Sbjct: 503 RANDAIEVLA---AMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 181/377 (48%), Gaps = 9/377 (2%)

Query: 89  FVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           F   GK      IF  L    C  ++   +I+I+  +L    ++   L  E   +    G
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK----G 238

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+   L+ N ++R + KE   +    + + +  R  + ++ ++N +L  L   GK ++  
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ +M S+G  P VVT++ILI   C+ G   K+ +A  + + M E G+ P+   ++ LI
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDG---KVEEAVNLLRSMKEKGLKPDAYCYDPLI 355

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC++  +  A +  E M S G    +V YN+++ GLC  GK D+A+ + +++   G  
Sbjct: 356 AGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP 415

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PNV + N L +         +A  +   +  QG+ P  ITYN+LI   C++G +++A  +
Sbjct: 416 PNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIEL 475

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M      P+V +YN ++ GL +         ++  +   G +    TY +L+  +  
Sbjct: 476 LVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGF 535

Query: 447 DGKSKKAVSLLDEMFKM 463
            G   +A+ L + +  M
Sbjct: 536 SGLRAEAMELANSLHGM 552



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 20/283 (7%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           EV    L++  C+    + ++   E M   G    V+    LI G      + +A  + +
Sbjct: 69  EVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME 128

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +   G KP+V   NALI+GF K   +E A  + D +  +G  P V+TYN +I ++C  G
Sbjct: 129 ILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +++ A  +   +L     P V TY  LI     +G ++    +++E+++ G+    +TYN
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++  +CK+    KA  LL     +      P+I+TYN+L++    +GK  +   L++E+
Sbjct: 248 AIIRGMCKEMMVDKAFELLR---SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304

Query: 499 LEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           +  G  PN  T+ I                +   M EKG  PD
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPD 347


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++   H   E F+   ++       +C ++L   +K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + +++   G+ P VV++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  ++ A ++F EM  +G+    VT+ +L
Sbjct: 191 FRLKSA---MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C  G +D A+    EM+  G  P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E A   R  M+   +  D   Y  LI+GL REG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G  K    LL E   M+++   P +VT
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKE---MQRDGHVPCVVT 418



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  +  A  VF+E+   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  +  A  LF ++   GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G ++ A      ML +G  PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A+     M K   E    + V Y  LI G C++G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIK---ENIRLDDVAYTALISGLCREG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 361 QSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 152/291 (52%), Gaps = 8/291 (2%)

Query: 243 ADAVFKDMVE-NGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF+ ++E  G   ++V  F+ LI  + +   +  A++ F     H       T   +
Sbjct: 48  ASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +                 E++  G   ++   N L++ FCK+  +  A+ +FD+I++ GL
Sbjct: 108 LEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y + G +++ F ++++M   GV PDV TY+ LI GL +E  +     
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +  E++ NG+    VT+  L+   CK G    A+    EM +   +   P+++TYN LI 
Sbjct: 228 LFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLR---QGFSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           G C+KG L+ A  L++E+  KGL P++ TY  + +   ++G   D+E  +Y
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG---DLETALY 332



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 45/269 (16%)

Query: 296 TYNSLINGLCVDGKLDEA-------VALRDEMMASGL-----------KPNVVTSNALIN 337
           +Y ++I+ LC    L EA       V+ + +  AS +           + +V   + LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLIT 74

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + +   +  A   F    E        T   +++ + K    +  +     +L+ G   
Sbjct: 75  AYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYPA 134

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            +  +N L+    +EG +   +++ +E+   G+R  +V++N L+    + G        L
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD-------L 187

Query: 458 DEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           DE F+    M      P++ TY+VLI G C++ K+ DAN L  E++  GL+PN  T+  +
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTL 247

Query: 514 ----------------REEMMEKGFIPDI 526
                            +EM+ +GF PD+
Sbjct: 248 IDGHCKTGSIDLAMETYKEMLRQGFSPDL 276


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 205/375 (54%), Gaps = 6/375 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+K S+ + N LL    K+G  ++   +Y EM     + N+ ++  ++ G   
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
               + A  ++++MK  GVS    TYN+LI+G C    + ++ + D + K  +  G +P 
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM---VDRVCEVDGMLKSFMSEGFIPT 540

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T+N++I+GF K   + +A  V+++M   G+   ++TY S I+G C  G  D A+ + +
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLN 600

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           ++   GL+P++V  NALINGFC++  +  A  L   + + GL+P+ + YN+LI  Y    
Sbjct: 601 DVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLN 660

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M++      SM+  G++ D STY  LI G S++GNV     + +E++  G      T+ 
Sbjct: 661 MMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFT 720

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L   LC+ G    A  LL+EM +++     PN+  YN+LI G+ +  KL++A  L +E+
Sbjct: 721 ALTHGLCRSGDIDGAKKLLEEMRRLDVR---PNVFIYNMLINGYLRDCKLQEAFRLHDEM 777

Query: 499 LEKGLIPNQTTYQIV 513
           L  G+ P+ TTY I+
Sbjct: 778 LNMGIQPDDTTYDIL 792



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 185/334 (55%), Gaps = 6/334 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V++   L+R  + +  F++   +  EMK+  +  N  ++N ++NG+C   ++ + 
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++   S G  P ++TYN +I+G+ K G +G  +    V++ M E G+ PN +T+ + 
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF---TVYQQMREKGLPPNIITYTSF 582

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+      A+K+  ++   G+   +V YN+LING C +G +  A+ L   ++  GL
Sbjct: 583 IDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGL 642

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN V  N+LI G+    ++++    ++ + + G+     TY TLID + K+G +  A  
Sbjct: 643 APNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALE 702

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+ +G +PD  T+  L  GL R G+++G + ++ E+    +R  +  YN+L+    
Sbjct: 703 LYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYL 762

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +D K ++A  L DEM  M  +   P+  TY++L+
Sbjct: 763 RDCKLQEAFRLHDEMLNMGIQ---PDDTTYDILV 793



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 214/459 (46%), Gaps = 25/459 (5%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           R+ + + VK G+      +   +      +  + I+   LM  Y    +       FK  
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKM--DVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              G+  + +    L+R   + G  +    + ++M  + +  +    + VL GL    + 
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A  + E+M   G+ P V TYN LI  +C+     K+ +A  +F  M + G+ P+  T+
Sbjct: 384 KDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAH---KLREALNLFDRMKKAGVKPSINTY 439

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N+L+ G+CK   +  A+K++ EM   G    VVTY +L+ G       D A AL DEM  
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +G+  N  T N LING C    V +   +      +G  P+++TYN++I+ + K G M  
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           AF +   M ++G+ P++ TY   I G  R G  +    ++N++   G++  +V YN L+ 
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             C++G    A+ LL  +    K+   PN V YN LI G+     +++ +     +++ G
Sbjct: 620 GFCQEGNMSHALQLLVILL---KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 503 LIPNQTTYQIVRE----------------EMMEKGFIPD 525
           ++ + +TY  + +                EMM KG+IPD
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPD 715



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 148/262 (56%), Gaps = 3/262 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ N ++   VK G       VY++M+ + +  N+ ++   ++G C+ G  + A
Sbjct: 536 GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ D++  G+ P +V YN LI+G+C++G    M  A  +   ++++G+ PN V +N+L
Sbjct: 596 LKMLNDVRRRGLQPDIVAYNALINGFCQEG---NMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G+     +    K +E M   GI A   TY +LI+G   DG +  A+ L  EMMA G 
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T  AL +G C+   ++ A+ L +++    + P+V  YN LI+ Y ++ ++++AF 
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 386 MRNSMLDRGVLPDVSTYNCLIA 407
           + + ML+ G+ PD +TY+ L++
Sbjct: 773 LHDEMLNMGIQPDDTTYDILVS 794



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 23/420 (5%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           P    + +      G+   + S   LL    +    +D   ++ EM+ R   ++   F+ 
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDA 197

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++   K G    A  + ++M    + P    Y + I   CK G  G+  +   + ++M 
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALR---MLREMK 254

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           E G    + T+ T++D   K   +  A++V +EM   G    V+   +L+ G C+  ++ 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+ L  E +  G+ P  V    LI G  +  + +KA  L   ++ QGL PS    + ++
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
                + R +DA  +   M D G LPDV TYN LI    +   +    N+ + +   G++
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             + TYN L+   CK G   +AV L  EM  ME  K  PN+VTY  L++G+  K   ++A
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEM-PMEGFK--PNVVTYITLMRGYIAKKDFDNA 490

Query: 492 NGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
             LL+E+ + G+  N  TY ++                 +  M +GFIP +  +   I+G
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 217/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 8   MIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLE 67

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  ++K   F+ V   Y+E+       +L  
Sbjct: 68  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYF 127

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  +   +   G+ P VV++N L++GY + G + + ++  +   
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA-- 185

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M  +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C  G
Sbjct: 186 -MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSG 244

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL P  ITY 
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       ++ E+++ 
Sbjct: 305 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSA 364

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G       LL E   M+++   P++VTYNVL+ G
Sbjct: 365 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGHVPSVVTYNVLMNG 414



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  + K         
Sbjct: 52  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWG 111

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDI---RVAQSVFNAITKWGLRPSVVSFNTLMN 168

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 169 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 228

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 229 NGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLI 288

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 289 DEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQE 348

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L EM     +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 349 GRYLDAEKVLREMLSAGLK---PDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405

Query: 508 TTYQIV 513
            TY ++
Sbjct: 406 VTYNVL 411



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCK+ +I  A  VF  +   G+   VV++N+L+NG   
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ ++GL P+ +T
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A    +   +M +E    + V Y  LI G CQ+G
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETA---FEHRKRMIQENIRLDDVAYTALISGLCQEG 349

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 350 RYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKG 384



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 65/255 (25%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 4   SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 44

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  + +  
Sbjct: 45  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLK 104

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CK+G  + A S+ + +       KW   P
Sbjct: 105 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAI------TKWGLRP 158

Query: 471 NIVTYNV-----------------------------------LIKGFCQKGKLEDANGLL 495
           ++V++N                                    LI G C++ K++DAN L 
Sbjct: 159 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 218

Query: 496 NELLEKGLIPNQTTY 510
           +E+L+KGL+PN  T+
Sbjct: 219 DEMLDKGLVPNGVTF 233


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 222/434 (51%), Gaps = 18/434 (4%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAF 139
           ++ +H     G  T  +T+ + +      +D    + ++  M  L  V+           
Sbjct: 214 QTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE-----AARLV 268

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            R    G    V++   LL+ L +  + ++     + M  R  ELN+  FN V+ G    
Sbjct: 269 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAE 324

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GKL +A+++ E M   G  P   TY+IL+ G CK G IG   +   + ++M + G  PN 
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR---LLREMEKKGFAPNV 381

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+  ++  FCK+        + EEM + G+      YN +I  LC DG++DEA+ L  E
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M + G  P++ + N +I   C  + +E+A  +F+++ E+G+  + ITYNT+I A  ++GR
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            +DA  +   M+  G   DV +YN LI  + ++GNV+    ++ E+   G++   V+YNI
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LCK+ + + A+ L  +M     +   P+IVTYN LI G C+ G +  A  LL +L 
Sbjct: 562 LISELCKERRVRDALELSKQML---NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618

Query: 500 EKGLIPNQTTYQIV 513
            + + P+  TY I+
Sbjct: 619 NENVHPDIITYNIL 632



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 205/386 (53%), Gaps = 26/386 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ AL  +G   +   +  EM       ++++F+ V+ G+C  G++ +A+ +++ M + G
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+TY  L+ G C+   + +  +A A+   + E     N V FNT+I G   +  ++
Sbjct: 276 CMPGVMTYGFLLQGLCR---VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 328

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A +++E MG  G      TY+ L++GLC  G++  AV L  EM   G  PNVVT   ++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + FCK  + +  R L +++S +GL+ +   YN +I A CK+GRM++A  +   M  +G  
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN +I  L     +E   ++   L+  G+ A  +TYN ++ AL +DG+ + AV L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             EM          ++V+YN LIK  C+ G ++ +  LL E+ EKG+ PN  +Y I    
Sbjct: 509 AKEMILHGCSL---DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 513 ------VRE------EMMEKGFIPDI 526
                 VR+      +M+ +G  PDI
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDI 591



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 180/337 (53%), Gaps = 39/337 (11%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++   + EGK  +   +Y+ M  +  + +  +++ +++GLCK G++  A  ++ +M+ 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 215 LGVSPKVVTYNILIDGYCKKG---------------GI-----------------GKMYK 242
            G +P VVTY I++  +CK G               G+                 G+M +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  + ++M   G  P+  ++NT+I   C +E +  A  +FE +   G+ A  +TYN++I+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            L  DG+  +AV L  EM+  G   +VV+ N LI   CK   V+++ VL ++++E+G+ P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + ++YN LI   CKE R+ DA  +   ML++G+ PD+ TYN LI GL + G +    N++
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            +L N  +   ++TYNIL+   CK       V LLD+
Sbjct: 615 EKLHNENVHPDIITYNILISWHCK-------VRLLDD 644



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 172 YVYKEMKRR-RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILID 229
           ++  ++ RR  ++ +  S+N VL+ L +A     A  +   M     V P   T+ +   
Sbjct: 124 HLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAAR 183

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C+   +G+  +A A+ + M  +G +P+ V + T+I   C    ++ A  +  EM   G
Sbjct: 184 ALCR---LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            AA V T++ ++ G+C  G++ EA  L D MM  G  P V+T   L+ G C+ +  ++AR
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 350 VLFDDISE-------------------------------QGLSPSVITYNTLIDAYCKEG 378
            +   + E                               +G  P   TY+ L+   CK G
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R+  A  +   M  +G  P+V TY  ++    + G  +  R ++ E+   G+      YN
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++ ALCKDG+  +A+ L+ E   M  +   P+I +YN +I   C   ++E+A  +   L
Sbjct: 421 GMIYALCKDGRMDEAMGLIQE---MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPD 525
           LE+G++ N  TY  +   ++  G   D
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQD 504



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 8/283 (2%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDE 312
           G+ P+  ++N ++    + +  + A+ ++  M     +     T+      LC  G+ DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+AL   M   G  P+ V    +I+  C +  V +A  L +++   G +  V T++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  GR+ +A  + + M+ +G +P V TY  L+ GL R    +  R ++  +       
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----L 309

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +V +N ++G    +GK  +A  L + M     +   P+  TY++L+ G C+ G++  A 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ---PDAHTYSILMHGLCKLGRIGSAV 366

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            LL E+ +KG  PN  TY IV     + G   D    +  +S 
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 129/241 (53%), Gaps = 9/241 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            ++   K+G+      +   + +  C+  +C  + II  L      N +       F+  
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL----CNNEQMEEAEHMFENL 477

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + G+ ++ ++ N ++ AL+++G+++D   + KEM      L++ S+N ++  +CK G +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           +++  ++E+M   G+ P  V+YNILI   CK+    ++  A  + K M+  G+ P+ VT+
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKER---RVRDALELSKQMLNQGLAPDIVTY 594

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G CK   + AA+ + E++ +  +   ++TYN LI+  C    LD+A  L +  MA
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654

Query: 323 S 323
           +
Sbjct: 655 A 655


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 222/434 (51%), Gaps = 18/434 (4%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAF 139
           ++ +H     G  T  +T+ + +      +D    + ++  M  L  V+           
Sbjct: 198 QTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE-----AARLV 252

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            R    G    V++   LL+ L +  + ++     + M  R  ELN+  FN V+ G    
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAE 308

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GKL +A+++ E M   G  P   TY+IL+ G CK G IG   +   + ++M + G  PN 
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR---LLREMEKKGFAPNV 365

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+  ++  FCK+        + EEM + G+      YN +I  LC DG++DEA+ L  E
Sbjct: 366 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 425

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M + G  P++ + N +I   C  + +E+A  +F+++ E+G+  + ITYNT+I A  ++GR
Sbjct: 426 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 485

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            +DA  +   M+  G   DV +YN LI  + ++GNV+    ++ E+   G++   V+YNI
Sbjct: 486 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 545

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+  LCK+ + + A+ L  +M     +   P+IVTYN LI G C+ G +  A  LL +L 
Sbjct: 546 LISELCKERRVRDALELSKQML---NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 602

Query: 500 EKGLIPNQTTYQIV 513
            + + P+  TY I+
Sbjct: 603 NENVHPDIITYNIL 616



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 205/386 (53%), Gaps = 26/386 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ AL  +G   +   +  EM       ++++F+ V+ G+C  G++ +A+ +++ M + G
Sbjct: 200 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+TY  L+ G C+   + +  +A A+   + E     N V FNT+I G   +  ++
Sbjct: 260 CMPGVMTYGFLLQGLCR---VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 312

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A +++E MG  G      TY+ L++GLC  G++  AV L  EM   G  PNVVT   ++
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + FCK  + +  R L +++S +GL+ +   YN +I A CK+GRM++A  +   M  +G  
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN +I  L     +E   ++   L+  G+ A  +TYN ++ AL +DG+ + AV L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             EM          ++V+YN LIK  C+ G ++ +  LL E+ EKG+ PN  +Y I    
Sbjct: 493 AKEMILHGCSL---DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549

Query: 513 ------VRE------EMMEKGFIPDI 526
                 VR+      +M+ +G  PDI
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDI 575



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 180/337 (53%), Gaps = 39/337 (11%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++   + EGK  +   +Y+ M  +  + +  +++ +++GLCK G++  A  ++ +M+ 
Sbjct: 299 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 358

Query: 215 LGVSPKVVTYNILIDGYCKKG---------------GI-----------------GKMYK 242
            G +P VVTY I++  +CK G               G+                 G+M +
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 418

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  + ++M   G  P+  ++NT+I   C +E +  A  +FE +   G+ A  +TYN++I+
Sbjct: 419 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 478

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            L  DG+  +AV L  EM+  G   +VV+ N LI   CK   V+++ VL ++++E+G+ P
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + ++YN LI   CKE R+ DA  +   ML++G+ PD+ TYN LI GL + G +    N++
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            +L N  +   ++TYNIL+   CK       V LLD+
Sbjct: 599 EKLHNENVHPDIITYNILISWHCK-------VRLLDD 628



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 37/340 (10%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V P   T+ +     C+   +G+  +A A+ + M  +G +P+ V + T+I   C    ++
Sbjct: 155 VPPTTFTFGVAARALCR---LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +  EM   G AA V T++ ++ G+C  G++ EA  L D MM  G  P V+T   L+
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 337 NGFCKKKLVEKARVLFDDISE-------------------------------QGLSPSVI 365
            G C+ +  ++AR +   + E                               +G  P   
Sbjct: 272 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 331

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY+ L+   CK GR+  A  +   M  +G  P+V TY  ++    + G  +  R ++ E+
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 391

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
              G+      YN ++ ALCKDG+  +A+ L+ E   M  +   P+I +YN +I   C  
Sbjct: 392 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE---MRSQGCNPDICSYNTIIYHLCNN 448

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            ++E+A  +   LLE+G++ N  TY  +   ++  G   D
Sbjct: 449 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 488



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 9/278 (3%)

Query: 234 KGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +GG+ +  +  A+++ MV  + + P   TF       C+      A+ +   M  HG   
Sbjct: 134 QGGLPRARRF-ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             V Y ++I+ LC  G + EA  L +EM+  G   +V T + ++ G C    V +A  L 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D +  +G  P V+TY  L+   C+  + ++A A    ML R    +V  +N +I G   E
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAE 308

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G +     +   +   G +    TY+IL+  LCK G+   AV LL E   MEK+   PN+
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE---MEKKGFAPNV 365

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           VTY +++  FC+ G  +D   LL E+  KGL  N   Y
Sbjct: 366 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 403



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 129/241 (53%), Gaps = 9/241 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            ++   K+G+      +   + +  C+  +C  + II  L      N +       F+  
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL----CNNEQMEEAEHMFENL 461

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + G+ ++ ++ N ++ AL+++G+++D   + KEM      L++ S+N ++  +CK G +
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 521

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           +++  ++E+M   G+ P  V+YNILI   CK+    ++  A  + K M+  G+ P+ VT+
Sbjct: 522 DRSLVLLEEMAEKGIKPNNVSYNILISELCKER---RVRDALELSKQMLNQGLAPDIVTY 578

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G CK   + AA+ + E++ +  +   ++TYN LI+  C    LD+A  L +  MA
Sbjct: 579 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 638

Query: 323 S 323
           +
Sbjct: 639 A 639



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 7/246 (2%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +     T+      LC  G+ DEA+AL   M   G  P+ V    +I+  C +  V +A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L +++   G +  V T++ ++   C  GR+ +A  + + M+ +G +P V TY  L+ GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            R    +  R ++  +        +V +N ++G    +GK  +A  L + M     +   
Sbjct: 275 CRVRQADEARAMLGRVPE----LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ--- 327

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           P+  TY++L+ G C+ G++  A  LL E+ +KG  PN  TY IV     + G   D    
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387

Query: 530 MYNISG 535
           +  +S 
Sbjct: 388 LEEMSA 393


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 186/316 (58%), Gaps = 3/316 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V +   ++  L K G+      ++K+M     + ++ +++ +++ LCK  ++N+A
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            DI   MK+ G+SP + TYN LI G C      +  +A A+  +M+   I+PN VTF+ L
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLC---NFSRWREASAMLNEMMSLNIMPNIVTFSLL 121

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+ FCK+ N+  A  V + M   G+   VVTY+SL+NG  +  ++ EA  L D M+  G 
Sbjct: 122 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP+V + N LING+CK K + +A+ LF+++  QGL+P +++YNTLID  C+ GR+ +A  
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 241

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +ML  G LPD+ TY+ L+ G  ++G +     +   + +  ++  +V YNIL+ A+C
Sbjct: 242 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 301

Query: 446 KDGKSKKAVSLLDEMF 461
           K    K+A  L  E+F
Sbjct: 302 KSRNLKEARKLFSELF 317



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 182/336 (54%), Gaps = 6/336 (1%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R  + ++ ++  ++NGLCK G+   A+ + + M   G  P VVTY+ +ID  CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           + +   A  +F  M   GI PN  T+N+LI G C       A  +  EM S  I   +VT
Sbjct: 61  VNE---ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           ++ LIN  C +G + EA  +   M   G++PNVVT ++L+NG+  +  V +AR LFD + 
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +G  P V +YN LI+ YCK  R+ +A  + N M+ +G+ PD+ +YN LI GL + G + 
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              ++   ++ NG    L TY+IL+   CK G   KA  L   M   +     PN+V YN
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM---QSTYLKPNMVMYN 294

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           +LI   C+   L++A  L +EL  +GL PN   +++
Sbjct: 295 ILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 177/306 (57%), Gaps = 6/306 (1%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M + G  P V TY  +I+G CK   IG+   A  +FK M E G  P+ VT++T+ID  CK
Sbjct: 1   MVARGYQPDVHTYTTIINGLCK---IGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCK 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D  ++ A+ +F  M + GI+  + TYNSLI GLC   +  EA A+ +EMM+  + PN+VT
Sbjct: 58  DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + LIN FCK+  V +AR +   ++E G+ P+V+TY++L++ Y  +  + +A  + + M+
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G  PDV +YN LI G  +   +   + + NE+++ G+   +V+YN L+  LC+ G+ +
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  L   M         P++ TY++L+ GFC++G L  A  L   +    L PN   Y 
Sbjct: 238 EAHDLFKNMLT---NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 294

Query: 512 IVREEM 517
           I+ + M
Sbjct: 295 ILIDAM 300



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 175/302 (57%), Gaps = 3/302 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK+ G+ G +  V++ + ++ +L K+ +  +   ++  MK + I  N+ ++N ++ GLC 
Sbjct: 33  FKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 92

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             +  +AS ++ +M SL + P +VT+++LI+ +CK+G +   ++A  V K M E G+ PN
Sbjct: 93  FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV---FEARGVLKTMTEMGVEPN 149

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+++L++G+     +  A K+F+ M + G    V +YN LING C   ++ EA  L +
Sbjct: 150 VVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFN 209

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  GL P++V+ N LI+G C+   + +A  LF ++   G  P + TY+ L+D +CK+G
Sbjct: 210 EMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 269

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  AF +  +M    + P++  YN LI  + +  N++  R + +EL   G++  +  + 
Sbjct: 270 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWK 329

Query: 439 IL 440
           + 
Sbjct: 330 LF 331



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 158/274 (57%), Gaps = 3/274 (1%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV  G  P+  T+ T+I+G CK     AA  +F++MG  G    VVTY+++I+ LC D +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           ++EA+ +   M A G+ PN+ T N+LI G C      +A  + +++    + P+++T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ +CKEG + +A  +  +M + GV P+V TY+ L+ G S +  V   R + + ++  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  + +YNIL+   CK  +  +A  L +EM     +   P+IV+YN LI G CQ G+L 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMI---HQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +A+ L   +L  G +P+  TY I+ +   ++G++
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 271



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 183/335 (54%), Gaps = 13/335 (3%)

Query: 74  VVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYV 127
           +VA+ Y P + ++   ++   K G+  + + +F  +  + C   +   S IID L     
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSL----C 56

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ + +   + F      G+  ++ + N L++ L    ++ +   +  EM    I  N+ 
Sbjct: 57  KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 116

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +F+ ++N  CK G + +A  +++ M  +GV P VVTY+ L++GY  +    ++++A  +F
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ---AEVFEARKLF 173

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M+  G  P+  ++N LI+G+CK + I  A ++F EM   G+   +V+YN+LI+GLC  
Sbjct: 174 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 233

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+L EA  L   M+ +G  P++ T + L++GFCK+  + KA  LF  +    L P+++ Y
Sbjct: 234 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           N LIDA CK   +++A  + + +  +G+ P++  +
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 3/139 (2%)

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ RG  PDV TY  +I GL + G       +  ++   G +  +VTY+ ++ +LCKD +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A   LD    M+ +   PNI TYN LI+G C   +  +A+ +LNE++   ++PN  T
Sbjct: 61  VNEA---LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117

Query: 510 YQIVREEMMEKGFIPDIEG 528
           + ++     ++G + +  G
Sbjct: 118 FSLLINIFCKEGNVFEARG 136


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 210/414 (50%), Gaps = 28/414 (6%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K+  +     + ++   L+  L+K G+ ++   V ++M  +     L ++  V++
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM---- 250
           GL KAG++ +A  I  DM   G  P    Y  LI G CK G   K  +A A++K+     
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSG---KPEEAYALYKEANARK 177

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFE-EMGSHGIAAGVVTYNSLINGLCVDGK 309
                +P+ VT+ +LIDG CK   I  A +VF+ E    G     VTY S+I+GLC  G+
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           ++E      EM   G +P+ VT  ALI+GF K K++ KA  ++  + + G   S +TYN 
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           ++D  CK GR+ +A+A   +M +RG +  V TY+ L+ G   EGNV     +   +++ G
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK-GKL 488
               LV+YNI++  LC+ GK  KA    +   K+ + +  P++ T+N  + G CQ+   +
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFE---KLLQRRLCPDVYTFNAFLHGLCQRLDTV 414

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
            D   L   ++ +G  PN  +Y I+ +                EM+ +G  PD+
Sbjct: 415 SDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDV 468



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 162/313 (51%), Gaps = 11/313 (3%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP +V + ++I+G C++    ++ +A +V +  V  G  P+ VT+N  IDG CK E +  
Sbjct: 4   SPDMVAFTVVINGLCREK---RLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A ++ ++M         VTY +L++GL   G+LDEA+A+ ++M+  G  P + T   +I+
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR---- 393
           G  K   VE+AR +F D+   G  P    Y  LI   CK G+ E+A+A+      R    
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIM-NELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             +PDV TY  LI GL + G +   R +  +E V  G     VTY  ++  LCK G+ ++
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
                 EM     E   P+ VTY  LI GF +   +  A+ +  ++L+ G + +  TY I
Sbjct: 241 GCERFHEMRNRGYE---PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 513 VREEMMEKGFIPD 525
           + + + + G + +
Sbjct: 298 ILDGLCKAGRVAE 310



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 169/341 (49%), Gaps = 8/341 (2%)

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
           H  +   D +   S+I  +     +   +     EA +R    G     ++   ++  L 
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVER----GFIPDAVTYTSIIDGLC 233

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K G+ E+    + EM+ R  E +  ++  +++G  KA  + KA  +   M   G     V
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYNI++DG CK G + + Y   A F  M E G +   VT++ L+DGFC + N+SAA+++F
Sbjct: 294 TYNIILDGLCKAGRVAEAY---ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 350

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
             M   G    +V+YN +I GLC  GKL +A    ++++   L P+V T NA ++G C++
Sbjct: 351 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR 410

Query: 343 -KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V     LF+ +  QG SP++ +Y+ L+D  C+ G +E A  +   M+ RGV PDV  
Sbjct: 411 LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           +N LI  L   G V+    +  EL           +++L G
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDG 511



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 165/313 (52%), Gaps = 14/313 (4%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++   SII  +  L  V+      G E F    + G +   ++   L+   +K      
Sbjct: 221 DAVTYTSIIDGLCKLGRVEE-----GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 275

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              VY++M +    ++  ++N +L+GLCKAG++ +A      M+  G    VVTY+ L+D
Sbjct: 276 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 335

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C +G +     A  +F+ M++ G  PN V++N +I G C+   ++ A   FE++    
Sbjct: 336 GFCSEGNVS---AAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392

Query: 290 IAAGVVTYNSLINGLCVDGKLD---EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           +   V T+N+ ++GLC   +LD   + V L + M++ G  PN+ + + L++G C+   +E
Sbjct: 393 LCPDVYTFNAFLHGLC--QRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLE 450

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  +F ++  +G++P V+ +NTLI   C  GR+++A  +    L+R   PD  +Y  L+
Sbjct: 451 VALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLL 509

Query: 407 AGLSREGNVEGVR 419
            GLSR   +E  R
Sbjct: 510 DGLSRCERMEEAR 522



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 147/294 (50%), Gaps = 21/294 (7%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+   + AK  PK        +++G  T VST+ + +    D LC+   + +        
Sbjct: 263 LIDGFMKAKMIPKAHRVYRQMLQSG--TVVSTVTYNIIL--DGLCKAGRVAE-------- 310

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                  +  F    + G  ++V++ + L+     EG       +++ M  R  E NL S
Sbjct: 311 ------AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ GLC+AGKL KA    E +    + P V T+N  + G C++  +  +     +F+
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR--LDTVSDGVELFE 422

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            MV  G  PN  +++ L+DG C+   +  A+++F EM S G+A  VV +N+LI  LC+ G
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAG 482

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           ++DEA+ +  E+      P+  +  +L++G  + + +E+AR+L   +  QG +P
Sbjct: 483 RVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 135/253 (53%), Gaps = 5/253 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   S ++ N +L  L K G+  +    +  M+ R     + +++ +++G C  G ++ A
Sbjct: 287 GTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAA 346

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M   G  P +V+YNI+I G C+ G + K Y     F+ +++  + P+  TFN  
Sbjct: 347 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY---FYFEKLLQRRLCPDVYTFNAF 403

Query: 266 IDGFCKD-ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           + G C+  + +S  +++FE M S G +  + +Y+ L++G+C  G L+ A+ +  EM++ G
Sbjct: 404 LHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P+VV  N LI   C    V++A  +F ++ E+  +P   +Y +L+D   +  RME+A 
Sbjct: 464 VAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEAR 522

Query: 385 AMRNSMLDRGVLP 397
            +   M  +G  P
Sbjct: 523 LLSFHMKLQGCAP 535



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 22/141 (15%)

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+  +  +I GL RE  ++   +++   V  G     VTYN+ +  LCK  +   A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L    KM+++K  P  VTY  L+ G  + G+L++A  +L                   E+
Sbjct: 65  LK---KMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVL-------------------EQ 102

Query: 517 MMEKGFIPDIEGHMYNISGTS 537
           M+EKG  P ++ +   I G S
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLS 123


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 225/449 (50%), Gaps = 29/449 (6%)

Query: 77  KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY----VKNMKP 132
           +K  KI     + VK G+F  V  +F   +   +SLC+   + D   L Y    + N++P
Sbjct: 341 RKQGKIDDAYELVVKVGRFGFVPNLF-VYNALINSLCKGGDL-DKAELLYSNMSLMNLRP 398

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           +            G+  S+L     + +  + G+ +     +  M +  I   + ++N +
Sbjct: 399 N------------GITYSIL-----IDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NG CK G L+ A  +  +M + GV P   T+  LI GYCK   + K +K   ++  M++
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFK---LYNKMID 498

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           NGI PN  TF  LI G C    ++ A ++F+E+    I    VTYN LI G C DGK+D+
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L ++M   GL P+  T   LI+G C    V KA+   DD+ +Q +  + + Y+ L+ 
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YC+EGR+ +A +    M+ RG+  D+  +  LI G  ++ + +   +++ ++ + G+R 
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             V Y  ++    K+G  KKA    D M     E+ +PN+VTY  L+ G C+ G+++ A 
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMV---TEECFPNVVTYTALMNGLCKAGEMDRAG 735

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            L   +    + PN  TY    + + ++G
Sbjct: 736 LLFKRMQAANVPPNSITYGCFLDNLTKEG 764



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 216/389 (55%), Gaps = 6/389 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L + +  +   G +      + G   +  + + L+  L K+GK +D   +  ++ R  
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              NL  +N ++N LCK G L+KA  +  +M  + + P  +TY+ILID +C+ G   ++ 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSG---RLD 417

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A + F  M+++GI      +N+LI+G CK  ++SAA  +F EM + G+     T+ SLI
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C D ++ +A  L ++M+ +G+ PNV T  ALI+G C    + +A  LFD++ E+ + 
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN LI+ YC++G+++ AF +   M  +G++PD  TY  LI+GL   G V   ++ 
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +++L    ++   + Y+ L+   C++G+  +A+S   EM +        ++V + VLI G
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM---DLVCHAVLIDG 654

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             ++   +    LL ++ ++GL P+   Y
Sbjct: 655 ALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 255/524 (48%), Gaps = 25/524 (4%)

Query: 29  PNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM 88
           P+ V   L N+  D  L LR+F +       +HS      ++H+LV ++ +    S LH 
Sbjct: 69  PHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHT 128

Query: 89  FVKNGKFTSVSTIF-HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
            +   + +    +F H L +       +++  ++L+  YV + +        K      L
Sbjct: 129 LLL--RESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNL 186

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
              V + + LL  L+K  KF  V  ++ E     +  +  + + V+  +C+     +A +
Sbjct: 187 LPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE 246

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            +  M++ G    +VTYN+LI G CK     ++ +A  V + +   G+  + VT+ TL+ 
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGD---RVSEAVEVKRSLGGKGLAADVVTYCTLVL 303

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC+ +   A +++ +EM   G +      + L++GL   GK+D+A  L  ++   G  P
Sbjct: 304 GFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVP 363

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N+   NALIN  CK   ++KA +L+ ++S   L P+ ITY+ LID++C+ GR++ A +  
Sbjct: 364 NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYF 423

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+  G+   V  YN LI G  + G++    ++  E+ N G+     T+  L+   CKD
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            + +KA  L +   KM      PN+ T+  LI G C   K+ +A+ L +EL+E+ + P +
Sbjct: 484 LQVQKAFKLYN---KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 508 TTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            TY +                + E+M +KG +PD   +   ISG
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 36/422 (8%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y K+++    F+ + +  D G+  +V +   L+  L    K  +   ++ E+  R+
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---- 237
           I+    ++N ++ G C+ GK++KA +++EDM   G+ P   TY  LI G C  G +    
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       G++ +A +   +M++ GI  + V    LIDG 
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K  +      + ++M   G+    V Y S+I+    +G   +A    D M+     PNV
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNV 715

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT  AL+NG CK   +++A +LF  +    + P+ ITY   +D   KEG M++A  + ++
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHA 775

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML +G+L +  T+N +I G  + G       +++E+  NG+    VTY+ L+   C+ G 
Sbjct: 776 ML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN 834

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              +V L D M     E   P++V YN+LI G C  G+L+ A  L +++L +G+IP+   
Sbjct: 835 VGASVKLWDTMLNRGLE---PDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKY 891

Query: 510 YQ 511
            Q
Sbjct: 892 LQ 893


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 220/435 (50%), Gaps = 23/435 (5%)

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           +C++ L  N ++   L+  +++       F+  K     G++ + ++ + L+R L K G+
Sbjct: 319 SCAE-LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 377

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            +    + K+M R     +  ++N ++ G  +      A  ++ +M++ G+SP V TY+I
Sbjct: 378 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 437

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +I G C+ G   +  KA  + ++M   G+ PN   +  LI G+C++ N+S A ++F++M 
Sbjct: 438 MIHGLCQSG---EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   +  YNSLI GL   G+++E+     +M   GL PN  T + LI+G+ K   +E
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 554

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  L   + + GL P+ + Y  L+++Y K   +E   +   SMLD+GV+ D   Y  LI
Sbjct: 555 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 614

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             LS  GN+E    +++ +  NG    +  Y+ L+  LCK    +KA  +LDEM K   +
Sbjct: 615 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 674

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ--------------- 511
              PNIV YN LI G C+ G +  A  + N +L KGL+PN  TY                
Sbjct: 675 ---PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731

Query: 512 -IVREEMMEKGFIPD 525
             +  EM+  G  PD
Sbjct: 732 FYLYNEMLATGITPD 746



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 12/460 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RLL  +  A   P + ++   +H   ++G+    S +   ++T    L  N+ +   L+ 
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT--KGLKPNAFVYAPLIS 475

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +     L  E F +     +   +   N L+  L K G+ E+    + +M+ R +  
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +++ +++G  K G L  A  +++ M   G+ P  V Y  L++ Y K   I K+    
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV---S 592

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           + FK M++ G++ +   +  LI       N+ AA +V   +  +G    V  Y+SLI+GL
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C     ++A  + DEM   G+ PN+V  NALI+G CK   +  AR +F+ I  +GL P+ 
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY +LID  CK G + +AF + N ML  G+ PD   Y+ L  G S  G++E    ++ E
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G  A + ++N LV   CK GK ++ + LL  +         PN +T   +I G  +
Sbjct: 773 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSE 828

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
            GKL + + +  EL +K        +  +  +M+ +G IP
Sbjct: 829 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 868



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 173/320 (54%), Gaps = 8/320 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
            L   CK  + + A  ++ +M+  G     VTYN+LI G C+ G + + +      KDM 
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF---GFKKDME 284

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G++P+  T+  LI+G CK    + A  + +EM    +   VV Y +LI+G   +G  D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           EA  +  EM+A+G++PN +T + L+ G CK   +++A +L   +      P  ITYN +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + + +    +DAF + + M + G+ P+V TY+ +I GL + G  E   +++ E+   G++
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
                Y  L+   C++G     VSL  E+F KM K    P++  YN LI G  + G++E+
Sbjct: 465 PNAFVYAPLISGYCREGN----VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520

Query: 491 ANGLLNELLEKGLIPNQTTY 510
           +     ++ E+GL+PN+ TY
Sbjct: 521 STKYFAQMQERGLLPNEFTY 540



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 184/353 (52%), Gaps = 6/353 (1%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           L A  K  +F+  + V  EM+ R   LN  ++N ++ GLC++G + +A    +DM+  G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P   TY  LI+G CK     +  +A A+  +M    + PN V +  LIDGF ++ N   
Sbjct: 289 VPDGFTYGALINGLCKSR---RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 345

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A K+ +EM + G+    +TY++L+ GLC  G++D A  L  +M+    +P+ +T N +I 
Sbjct: 346 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 405

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G  +    + A  L  ++   G+SP+V TY+ +I   C+ G  E A  +   M  +G+ P
Sbjct: 406 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 465

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +   Y  LI+G  REGNV     I +++    +   L  YN L+  L K G+ +++    
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +   M++    PN  TY+ LI G+ + G LE A  L+  +L+ GL PN   Y
Sbjct: 526 AQ---MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 214/439 (48%), Gaps = 76/439 (17%)

Query: 161 LVKEGKF-----EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+ EG F     +D   +  EM+   I  N+ +++ +++GLC++G+  KASD++E+M + 
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461

Query: 216 GVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKA 243
           G+ P    Y  LI GYC++G +                                G++ ++
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV---------------------- 281
              F  M E G+LPNE T++ LI G+ K+ ++ +A ++                      
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 581

Query: 282 -------------FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
                        F+ M   G+      Y  LI+ L   G ++ A  +   +  +G  P+
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V   ++LI+G CK    EKA  + D++S++G+ P+++ YN LID  CK G +  A  + N
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           S+L +G++P+  TY  LI G  + G++     + NE++  G+      Y++L       G
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             ++A+ L++EMF     +   +I ++N L+ GFC++GK+++   LL+ ++ +GL+PN  
Sbjct: 762 DLEQAMFLIEEMFL----RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817

Query: 509 TYQIVREEMMEKGFIPDIE 527
           T + +   + E G + ++ 
Sbjct: 818 TIENIISGLSEAGKLSEVH 836



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 216/441 (48%), Gaps = 35/441 (7%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  ++L+    ++      F   K   DYGL     +   L+  L K  +  + + + 
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM    ++ N+  +  +++G  + G  ++A  ++++M + GV P  +TY+ L+ G CK 
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK- 374

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G+M +A  + K MV +   P+ +T+N +I+G  +  +   A ++  EM + GI+  V
Sbjct: 375 --MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 432

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY+ +I+GLC  G+ ++A  L +EM   GLKPN      LI+G+C++  V  A  +FD 
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 492

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +++  + P +  YN+LI    K GR+E++      M +RG+LP+  TY+ LI G  + G+
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 552

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------ 462
           +E    ++  +++ G++   V Y  L+ +  K    +K  S    M              
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 612

Query: 463 --------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
                               +EK    P++  Y+ LI G C+    E A G+L+E+ +KG
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
           + PN   Y  + + + + G I
Sbjct: 673 VDPNIVCYNALIDGLCKSGDI 693



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 197/411 (47%), Gaps = 29/411 (7%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N      L+  Y+KN       +  +R  D GLK + +    LL +  K    E V 
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
             +K M  + + L+   +  +++ L  +G +  A  ++  ++  G  P V  Y+ LI G 
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK        KA  +  +M + G+ PN V +N LIDG CK  +IS A  VF  + + G+ 
Sbjct: 653 CKTA---DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 709

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY SLI+G C  G +  A  L +EM+A+G+ P+    + L  G      +E+A  L
Sbjct: 710 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 769

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++  +G + S+ ++N L+D +CK G+M++   + + ++ RG++P+  T   +I+GLS 
Sbjct: 770 IEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 828

Query: 412 EGNVEGVRNIMNEL-------------------VNNGMRAGLVTYNILVGALCKDGKSKK 452
            G +  V  I  EL                   +N G +  L   + ++   CK+G   K
Sbjct: 829 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDK 887

Query: 453 AVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           A+ L D +      K  P    +Y  ++   C+KGKL +A  LL E+ ++G
Sbjct: 888 ALMLRDVIVA----KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           + S +   C   + D A  +  EM   G   N VT N LI G C+   VE+A     D+ 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           + GL P   TY  LI+  CK  R  +A A+ + M    + P+V  Y  LI G  REGN +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               ++ E+V  G++   +TY+ LV  LCK G+  +A  LL +M    ++   P+ +TYN
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV---RDSHRPDTITYN 401

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEK 520
           ++I+G  +    +DA  LL+E+   G+ PN  TY I                + EEM  K
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461

Query: 521 GFIPDIEGHMYNISG 535
           G  P+   +   ISG
Sbjct: 462 GLKPNAFVYAPLISG 476



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 157/399 (39%), Gaps = 92/399 (23%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++KNG   S   +   +      L  N +I   L+ +Y K+         FK   D
Sbjct: 543 LIHGYLKNGDLESAEQLVQRM--LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 600

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+         L+  L   G  E    V   +++     ++  ++ +++GLCK     K
Sbjct: 601 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 660

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I+++M   GV P +V YN LIDG CK G I     A  VF  ++  G++PN VT+ +
Sbjct: 661 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY---ARNVFNSILAKGLVPNCVTYTS 717

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIA--------------------------------- 291
           LIDG CK  +IS A  ++ EM + GI                                  
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777

Query: 292 -AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF----------- 339
            A + ++N+L++G C  GK+ E + L   +M  GL PN +T   +I+G            
Sbjct: 778 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 837

Query: 340 ------------------------------------------CKKKLVEKARVLFDDISE 357
                                                     CK+  ++KA +L D I  
Sbjct: 838 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVA 897

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +       +Y  ++D  C++G++ +A  +   M  RG L
Sbjct: 898 KSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 936



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 19/184 (10%)

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G  E   ++ +EM  R    ++ SFN +++G CK GK+ +   ++  +   G+ P  +T 
Sbjct: 761 GDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 819

Query: 225 NILIDGYCKKGGIGKMYKA----------------DAVFKDMVENGILPNEVTFNTLIDG 268
             +I G  + G + +++                   ++F DM+  G +P +V  + +I  
Sbjct: 820 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV-DDMIRD 878

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKP 327
            CK+ N+  A+ + + + +     G  +Y ++++ LC  GKL EA+ L  EM   G L+P
Sbjct: 879 HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 938

Query: 328 NVVT 331
            +V 
Sbjct: 939 TLVA 942


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 214/378 (56%), Gaps = 12/378 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V+ C+ L+  L ++G  ++    + +  +R + LN   FN +++G  +  +    
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M    V P VVTY +L+ G  ++G   ++ +A A+F  +++ G  P+ + + TL
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQG---RLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGFCK  + +  +++F+ M S+GI   +  YN LIN    +G ++  + L  E++  GL
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P++VT N +I G+C  K+  KA  LF+ +      P+ IT+  LIDAYCK+GRM+DA  
Sbjct: 622 EPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAML 681

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + +SML+RG  P++ TY+CLI G  +  N E    +  +++ + +   +V+Y+IL+  LC
Sbjct: 682 IFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLC 741

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G  ++A       F+    +   P+++ Y +LI+G+C+ G+L +A  L + +L  G++
Sbjct: 742 KKGLMEEA----SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797

Query: 505 PNQTTYQIVREEMMEKGF 522
           P+     ++++ + E GF
Sbjct: 798 PD----DLLQKALAEYGF 811



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 249/545 (45%), Gaps = 55/545 (10%)

Query: 7   STIEDITELIRNHHWS-----KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASH 61
           + +  I +   ++++S      L N  P  +   +F   ++P   LR+F W+   L   H
Sbjct: 28  TVVHQIAKAFHHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCH 87

Query: 62  SLLLTGRLLHSLVVAKKY-PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
            +     + H L+  + + P  R F  M    G+F ++  +     +  +     S +  
Sbjct: 88  PVQSFCGIAHVLLRHRMFDPATRVFDRMV---GQFGNLEVLGEFHGSFRNYGSNPSTVYS 144

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+  Y +N       + F      G+  S  + +++L  L+   + + +   Y+EM + 
Sbjct: 145 FLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCK- 203

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
                L  + FV N   K G++ K  +    +   G+ PK+V  N ++ G C    IG  
Sbjct: 204 ----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV- 258

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A   F  MV +G  PN VTF+TLI+ +CK+  +  A  ++  M   GI   +V Y+ L
Sbjct: 259 --ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSIL 316

Query: 301 INGLCVDGKLDE-----------------------------------AVALRDEMMASGL 325
           INGL   GKL+E                                   A+ +   M+  G+
Sbjct: 317 INGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGI 376

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT + LING C+   V +A  +F  I +QGL PSV+TY++LID +CK   + D F 
Sbjct: 377 SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFG 436

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML +G +PDV   + LI GLSR+G ++       + V  G+      +N L+    
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +  +++  + +      M   K  P++VTY VL+KG  ++G+L++A  L  +LL+KG  P
Sbjct: 497 RLKRTRDGLKM---YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 506 NQTTY 510
           +   Y
Sbjct: 554 DHIIY 558



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 220/481 (45%), Gaps = 76/481 (15%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    L+  Y K ++    F  +    + G+   ++  + L+  L + GK E+   ++
Sbjct: 274 NLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF 333

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
                R +++++  F+ +++   + G L KA ++   M   G+SP VVTY+ILI+G C+ 
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRN 393

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   ++ +A  VF  +++ G+ P+ +T+++LIDGFCK EN+     ++  M   G    V
Sbjct: 394 G---RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLK---------------------------- 326
           V  + LINGL   G +DEA+    + +  GL                             
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510

Query: 327 -------PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                  P+VVT   L+ G  ++  +++A  LF  + ++G SP  I Y TLID +CK+  
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN- 438
                 +   M   G+ PD+  YN LI    REG VE V  ++ E++  G+   +VTYN 
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 439 ----------------------------------ILVGALCKDGKSKKAVSLLDEMFKME 464
                                             IL+ A CKDG+   A+ +   M +  
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
            E   PNI+TY+ LI G+ +    E A  L  ++L   + PN  +Y I+ + + +KG + 
Sbjct: 691 PE---PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747

Query: 525 D 525
           +
Sbjct: 748 E 748



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 76/436 (17%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ + L+    KE + ++   +Y  M  + I  +L  ++ ++NGL +AGKL + 
Sbjct: 270 GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEG 329

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +     + GV   VV ++ ++D Y + G +GK   A  V+  M++ GI PN VT++ L
Sbjct: 330 NSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGK---AIEVYTRMLKEGISPNVVTYSIL 386

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C++  +  A  VF ++   G+   V+TY+SLI+G C    L +   L   M+  G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS------------------------ 361
            P+VV  + LING  ++ ++++A   F    ++GL+                        
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 362 -----------PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR----------------- 393
                      P V+TY  L+    ++GR+++A A+   +L +                 
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 394 ------------------GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
                             G+ PD+  YN LI    REG VE V  ++ E++  G+   +V
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN ++   C      KA+ L  E+ K  + +  PN +T+ +LI  +C+ G+++DA  + 
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQ--PNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 496 NELLEKGLIPNQTTYQ 511
           + +LE+G  PN  TY 
Sbjct: 684 SSMLERGPEPNILTYS 699



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 165/325 (50%), Gaps = 7/325 (2%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+A KR    GL  +    N L+    +  +  D   +Y  M   ++  ++ ++  ++ G
Sbjct: 474 FQAVKR----GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L + G+L++A  +   +   G SP  + Y  LIDG+CKK       +   +FK M  NGI
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQ---IFKLMQSNGI 586

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+   +N LI+ F ++  +   +++  E+  +G+   +VTYN++I G C      +A+ 
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + +     +PN +T   LI+ +CK   ++ A ++F  + E+G  P+++TY+ LID Y 
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K    E AF +   ML   V P++ +Y+ LI GL ++G +E         +   +   ++
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVI 766

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
            Y IL+   CK G+  +A+ L D M
Sbjct: 767 AYGILIRGYCKVGRLAEAMMLYDHM 791



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 172/320 (53%), Gaps = 3/320 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G + +   G Y +   V++   L++ L ++G+ ++   ++ ++ ++    +   +  +++
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK         I + M+S G+ P +  YN+LI+ + ++G +  + +   + +++++ G
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE---LLREIIKYG 620

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+NT+I G+C  +  S A+K+FE +         +T+  LI+  C DG++D+A+
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M+  G +PN++T + LI+G+ K +  E A  L++ +    +SP++++Y+ LID  
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+G ME+A       + R +LPDV  Y  LI G  + G +     + + ++ NG+    
Sbjct: 741 CKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800

Query: 435 VTYNILVGALCKDGKSKKAV 454
           +    L     +D ++K  V
Sbjct: 801 LLQKALAEYGFQDSQAKNCV 820



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 174/364 (47%), Gaps = 52/364 (14%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           + G L    +     ++ G +P  V Y+ L+  YC+ G + +   A   F  M + G+  
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDR---AVDTFAWMSKMGVSI 173

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +    + ++D     + I   ++ +EEM       G+  Y  + N     G++++ +   
Sbjct: 174 SHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLKRGEVEKGLNFH 228

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++  GL P +V  N ++ G C    +  A   FD +   G SP+++T++TLI+ YCKE
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------GVR------ 419
            R+++AF++ N M+++G++PD+  Y+ LI GL R G +E            GV+      
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 420 -----------------NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
                             +   ++  G+   +VTY+IL+  LC++G+  +A  +  ++ K
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEM 517
              E   P+++TY+ LI GFC+   L D  GL   +L KG +P+     ++     R+ M
Sbjct: 409 QGLE---PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465

Query: 518 MEKG 521
           M++ 
Sbjct: 466 MDEA 469


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 234/460 (50%), Gaps = 12/460 (2%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSV--STIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +H LV A+   +  S L      G   S   S++   +S C  +   N   +D+L+ AYV
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPT---NLFSVDLLVNAYV 171

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  K      A     + G K+S+ SCN +L ALV   K E V    KE   R+  L++ 
Sbjct: 172 KEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVT 231

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           + N VLN LC  GKL+KA  +++ MK+  + P  VTYN +++ Y KKG   +   A  + 
Sbjct: 232 TCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKG---RCKSALRIL 287

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            DM +NGI  +  T+N +ID  CK +  + A  + + M    +     +YN+LI+G   +
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK++ A+ + ++M+   LKP+V T  ALI+G+C+    ++AR +  ++   G+ PS +TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + L++ YCK  ++  A  +   +  R +  + + Y  LI G  + G V   + I+  ++ 
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G+   ++TY+ L+  +CK G   +   +L    +M+K    PN V Y  L+  FC+ G 
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILS---RMQKSGVLPNNVLYTTLVFYFCKAGH 524

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            ++A     ++   GL+ N   +  +      +G I + E
Sbjct: 525 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 226/475 (47%), Gaps = 47/475 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + L+ +VK G+  S   I   +        L   +I+ID L     K  +    +   KR
Sbjct: 269 TILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL----CKLKRSARAYLLLKR 324

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             +  L     S N L+     EGK     Y++ +M R+ ++ ++ ++  +++G C+ G+
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
            ++A  ++ +M+  GV P  +TY+ L++GYCK   +G    A  + K +    I  N   
Sbjct: 385 TDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGP---ALDLIKYLRSRSISINRTM 441

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  LIDGFC+   +S A ++ + M + GI   V+TY++LING+C  G + E   +   M 
Sbjct: 442 YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 501

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL--------------------- 360
            SG+ PN V    L+  FCK    ++A   F DI   GL                     
Sbjct: 502 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 561

Query: 361 --------------SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
                         S  V ++N +ID+YC+ G + +AF++ ++M+  G  PD+ TY  L+
Sbjct: 562 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 621

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL + G++   +  M  L+         T N L+  +CK G   +A+ L +   KM   
Sbjct: 622 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE---KMVTR 678

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              P+  TY +L+ GFC++GK+  A  LL  +LEKGL+P+   Y  +   ++ +G
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 733



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 225/510 (44%), Gaps = 77/510 (15%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +H F   GK      IF+ +   +   S+   + +ID     Y +N +          
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALID----GYCRNGRTDEARRVLYE 394

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G++ S L+ + LL    K  K      + K ++ R I +N   +  +++G C+ G+
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------ 237
           ++KA  I++ M + G+ P V+TY+ LI+G CK G I                        
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514

Query: 238 --------GKMYKADAVFKDMVENGILPNEV----------------------------- 260
                   G   +A   F D+  +G++ N V                             
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574

Query: 261 ------TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
                 +FN +ID +C+  N+  A  V++ M  HG    + TY SL+ GLC  G L +A 
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
                ++      +  T N L+ G CK   +++A  L + +  + + P   TY  L+D +
Sbjct: 635 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 694

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV-NNGMRAG 433
           CK G++  A  +   ML++G++PD   Y CL+ GL  EG V+    +  E++   G+ A 
Sbjct: 695 CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            + YN ++    K G+  +   L   M  M + + +P+  +YN+L+ G+ +KG+L     
Sbjct: 755 CIAYNSMMNGYLKGGQINEIERL---MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 811

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           L  +++++G+ P+  TY+++   + E G I
Sbjct: 812 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 841



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 206/448 (45%), Gaps = 52/448 (11%)

Query: 135  GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             F  +     +G    + +   LLR L + G     +     +  +   ++  + N +L 
Sbjct: 598  AFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLV 657

Query: 195  GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            G+CK G L++A D+ E M +  + P   TY IL+DG+CK+G   K+  A  + + M+E G
Sbjct: 658  GICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG---KVVPALILLQMMLEKG 714

Query: 255  ILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            ++P+ + +  L++G   +  + AA  +F+E+    G+ A  + YNS++NG    G+++E 
Sbjct: 715  LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 774

Query: 314  VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
              L   M  + + P+  + N L++G+ KK  + +   L+ D+ ++G+ P  +TY  LI  
Sbjct: 775  ERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFG 834

Query: 374  YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE----------------GNVEG 417
             C+ G +E A      M+  GV PD   ++ LI   S +                G+++G
Sbjct: 835  LCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDG 894

Query: 418  VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--------------- 462
               +  ++   G+    V  + +V  LCK GK ++A+ +   + +               
Sbjct: 895  AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 954

Query: 463  -----------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                             ME      ++VTYNVLI G C K  + DA  L  E+  KGL+P
Sbjct: 955  GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 1014

Query: 506  NQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            N TTY  +   M   G + D E  + +I
Sbjct: 1015 NITTYITLTGAMYATGTMQDGEKLLKDI 1042



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 24/382 (6%)

Query: 100  TIFHALSTCSDSLCRN----SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
            T+  AL  C   + RN    +    +L+  + K  K        +   + GL    ++  
Sbjct: 664  TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYT 723

Query: 156  QLLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
             LL  LV EG+ +   Y+++E+  +  +  +  ++N ++NG  K G++N+   +M +M  
Sbjct: 724  CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 783

Query: 215  LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              V P   +YNIL+ GY KKG + +      +++DMV+ GI P+ VT+  LI G C+   
Sbjct: 784  NEVYPSSASYNILMHGYIKKGQLSRTL---YLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 840

Query: 275  ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD----------------GKLDEAVALRD 318
            I  A+K  E+M   G+    + ++ LI                      G +D A  L++
Sbjct: 841  IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE 900

Query: 319  EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +M A G+ P+ V  ++++ G CK   VE+A ++F  I   G+ P++ T+ TL+   CKE 
Sbjct: 901  DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 379  RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++DAF ++  M   G+  DV TYN LI GL  +  +    ++  E+ + G+   + TY 
Sbjct: 961  KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 439  ILVGALCKDGKSKKAVSLLDEM 460
             L GA+   G  +    LL ++
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDI 1042



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 193/401 (48%), Gaps = 52/401 (12%)

Query: 155  NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
            N LL  + K G  ++   + ++M  R I  +  ++  +L+G CK GK+  A  +++ M  
Sbjct: 653  NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 215  LGVSPKVVTYNILIDGYCKKGGI---------------------------------GKMY 241
             G+ P  + Y  L++G   +G +                                 G++ 
Sbjct: 713  KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 772

Query: 242  KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            + + + ++M EN + P+  ++N L+ G+ K   +S  + ++ +M   GI    VTY  LI
Sbjct: 773  EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 832

Query: 302  NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF--------- 352
             GLC  G ++ AV   ++M+  G+ P+ +  + LI  F +K  +  A  LF         
Sbjct: 833  FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDI 892

Query: 353  -------DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
                   +D+   G+ PS +  ++++   CK G++E+A  + +S++  G++P ++T+  L
Sbjct: 893  DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 952

Query: 406  IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
            + GL +E  ++   ++   + + G++  +VTYN+L+  LC       A+ L +EM   + 
Sbjct: 953  MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM---KS 1009

Query: 466  EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            +   PNI TY  L       G ++D   LL ++ ++G++P+
Sbjct: 1010 KGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 166/326 (50%), Gaps = 14/326 (4%)

Query: 85   FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
             L+  V  G+  + S +F  +  C + L  + I  + +M  Y+K  + +      +   +
Sbjct: 725  LLNGLVNEGQVKAASYMFQEI-ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 783

Query: 145  YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
              +  S  S N L+   +K+G+     Y+Y++M +  I+ +  ++  ++ GLC+ G +  
Sbjct: 784  NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEI 843

Query: 205  ASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-------------GIGKMYKADAVFKDMV 251
            A   +E M   GV P  + ++ILI  + +K               +G +  A  + +DM 
Sbjct: 844  AVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMK 903

Query: 252  ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              G++P+EV  ++++ G CK   +  A+ VF  +   G+   + T+ +L++GLC + K+D
Sbjct: 904  ALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKID 963

Query: 312  EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            +A  L+  M + GLK +VVT N LI G C KK +  A  L++++  +GL P++ TY TL 
Sbjct: 964  DAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 1023

Query: 372  DAYCKEGRMEDAFAMRNSMLDRGVLP 397
             A    G M+D   +   + DRG++P
Sbjct: 1024 GAMYATGTMQDGEKLLKDIEDRGIVP 1049



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 152/301 (50%), Gaps = 19/301 (6%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GL +  ++ N ++   +K G+  ++E + + M    +  +  S+N +++G  K G+L++ 
Sbjct: 750  GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              +  DM   G+ P  VTY +LI G C+ G I    K     + MV  G+ P+ + F+ L
Sbjct: 810  LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK---FLEKMVLEGVFPDNLAFDIL 866

Query: 266  IDGFCKDENISAAMKVF----------------EEMGSHGIAAGVVTYNSLINGLCVDGK 309
            I  F +   +S A+++F                E+M + G+    V  +S++ GLC  GK
Sbjct: 867  IKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 926

Query: 310  LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            ++EA+ +   +M +G+ P + T   L++G CK+  ++ A  L   +   GL   V+TYN 
Sbjct: 927  VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNV 986

Query: 370  LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            LI   C +  + DA  +   M  +G+LP+++TY  L   +   G ++    ++ ++ + G
Sbjct: 987  LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046

Query: 430  M 430
            +
Sbjct: 1047 I 1047


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 251/493 (50%), Gaps = 19/493 (3%)

Query: 47  LRYFCWSTKELRAS-HSLLLTGRL--LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVST 100
           +R FC   + LR   HSL     L     +V ++  P I  F   L++  K  KF  V  
Sbjct: 33  VRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +   L     S   +    ++LM  + ++ +P L      +    G +  + +   L+  
Sbjct: 93  LCKHLQIMGVS--NDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLING 150

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
                + E+   +  +M    I+ ++  +  +++ LCK G ++ A  +   M++ G+ P 
Sbjct: 151 FCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD 210

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           VV Y  L++G C     G+   AD + + M++  I P+ +TFN LID F K+  +  A +
Sbjct: 211 VVMYTSLVNGLCNS---GRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKE 267

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           ++ EM    IA  + TY SLINGLC++G+LDEA  +   M   G  P+VV   +LINGFC
Sbjct: 268 LYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFC 327

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K K VE A  +F ++S++GL+ + ITY TLI  +   G+   A  +   M+ RGV P++ 
Sbjct: 328 KCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIR 387

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVN---NGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           TYN L+  L   G V     I  ++     +G+   + TYN+L+  LC +GK +KA+ + 
Sbjct: 388 TYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVF 447

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            +M K + +     I+TY ++I+G C+ GK++DA  L   L  KG+ PN  TY  +   +
Sbjct: 448 GDMQKRDMDIG---IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504

Query: 518 MEKGFIPDIEGHM 530
             +G +  +E H+
Sbjct: 505 FREGLM--LEAHV 515



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 190/358 (53%), Gaps = 20/358 (5%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  DSLC+N  + + L L              F +  +YG++  V+    L+  L   G
Sbjct: 180 TTIIDSLCKNGHVDNALSL--------------FNQMENYGIRPDVVMYTSLVNGLCNSG 225

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++ D + + + M +R+I+ ++ +FN +++   K GKL  A ++  +M  + ++P + TY 
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYT 285

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI+G C +   G++ +A  +F  M   G  P+ V + +LI+GFCK + +  AMK+F EM
Sbjct: 286 SLINGLCME---GRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEM 342

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    +TY +LI G  + GK + A  +   M++ G+ PN+ T N L++  C    V
Sbjct: 343 SQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKV 402

Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            KA ++F+D+ ++   G+ P++ TYN L+   C  G++E A  +   M  R +   + TY
Sbjct: 403 NKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITY 462

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
             +I G+ + G V+   N+   L + G++  +VTY  ++  L ++G   +A  L  +M
Sbjct: 463 TIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM 520



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 18/275 (6%)

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
           G+    +A   +++++ NG+  + + FN  +D             +F  M        ++
Sbjct: 28  GLSFWVRAFCNYREILRNGL--HSLQFNEALD-------------LFSHMVESRPLPSII 72

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            +  L+N +    K D  + L   +   G+  ++ T N L+N FC+      A      +
Sbjct: 73  DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            + G  P + T+ +LI+ +C   R+E+A +M N M++ G+ PDV  Y  +I  L + G+V
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +   ++ N++ N G+R  +V Y  LV  LC  G+ + A  LL  M    K K  P+++T+
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM---KRKIKPDVITF 249

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           N LI  F ++GKL DA  L NE+++  + PN  TY
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTY 284


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 49/487 (10%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSD------------SL 112
           R+L+ +++   YP  +   S +H +  +G  +    +   +  C              S+
Sbjct: 317 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376

Query: 113 C--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           C  ++S+  D+L LA           +A+      G+  + ++ +   R L   GK+E  
Sbjct: 377 CGDKDSLNFDLLDLAE----------KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             V +EM  +    +  +++ VLN LC A K+  A  + E+MK  G+   V TY I++D 
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK G I +  K    F +M E G  PN VT+  LI  + K + +S A ++FE M S G 
Sbjct: 487 FCKAGLIEQARKW---FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS----------------GLKPNVVTSNA 334
              +VTY++LI+G C  G++++A  + + M  S                  +PNVVT  A
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++GFCK   VE+AR L D +S +G  P+ I Y+ LID  CK G++++A  ++  M + G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TY+ LI    +    +    ++++++ N     +V Y  ++  LCK GK+ +A 
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L   M  ME++   PN+VTY  +I GF   GK+E    LL  +  KG+ PN  TY+++ 
Sbjct: 724 KL---MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 781 DHCCKNG 787



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 224/461 (48%), Gaps = 38/461 (8%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L  A KY K  S +   +  G     ST    L    + LC  S     + LA+      
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL----NYLCNAS----KMELAF------ 462

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            L FE  KR G   L + V +   ++ +  K G  E     + EM+      N+ ++  +
Sbjct: 463 -LLFEEMKRGG---LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 518

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------- 242
           ++   KA K++ A+++ E M S G  P +VTY+ LIDG+CK G + K  +          
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 578

Query: 243 ---ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
               D  FK   +N   PN VT+  L+DGFCK   +  A K+ + M   G     + Y++
Sbjct: 579 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 638

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GLC  GKLDEA  ++ EM   G    + T ++LI+ + K K  + A  +   + E  
Sbjct: 639 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 698

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            +P+V+ Y  +ID  CK G+ ++A+ +   M ++G  P+V TY  +I G    G +E   
Sbjct: 699 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 758

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVL 478
            ++  + + G+    VTY +L+   CK+G    A +LL+EM    K+  WP +   Y  +
Sbjct: 759 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM----KQTHWPTHTAGYRKV 814

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           I+GF    +  ++ GLL+E+ +    P  + Y+++ + +++
Sbjct: 815 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 853



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 245/594 (41%), Gaps = 123/594 (20%)

Query: 31  TVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 90
           ++++++    A P  ++ +F W+ +++   H+  +   L+  +V          FL    
Sbjct: 92  SLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIR 151

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
            + K      +F                +++L+  + +N    +  E   R  D+  + S
Sbjct: 152 DDDK-----EVFGQF-------------LNVLVRKHCRNGSFSIALEELGRLKDFRFRPS 193

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN-----------------------LD 187
             + N L++A +K  + +    +++EM    + ++                       ++
Sbjct: 194 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE 253

Query: 188 SFNFV---------LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-------------- 224
           + NFV         ++GLC+A    +A D +  M++    P VVTY              
Sbjct: 254 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 313

Query: 225 ---------------------NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
                                N L+  YC  G     YK   + K MV+ G +P  V +N
Sbjct: 314 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK---LLKKMVKCGHMPGYVVYN 370

Query: 264 TLIDGFCKDEN------ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
            LI   C D++      +  A K + EM + G+    +  +S    LC  GK ++A ++ 
Sbjct: 371 ILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 430

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM+  G  P+  T + ++N  C    +E A +LF+++   GL   V TY  ++D++CK 
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G +E A    N M + G  P+V TY  LI    +   V     +   +++ G    +VTY
Sbjct: 491 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 550

Query: 438 NILVGALCKDGKSKKAVSLLDEM------------FKM-EKEKKWPNIVTYNVLIKGFCQ 484
           + L+   CK G+ +KA  + + M            FK  +   + PN+VTY  L+ GFC+
Sbjct: 551 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 610

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGF 522
             ++E+A  LL+ +  +G  PNQ  Y                Q V+ EM E GF
Sbjct: 611 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 11/305 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+    K  K     E      ++G  +++ + + L+    K  + +    V 
Sbjct: 632 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 691

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M+ M+  G  P VVTY  +IDG+   
Sbjct: 692 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF--- 748

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G IGK+     + + M   G+ PN VT+  LID  CK+  +  A  + EEM         
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y  +I G   + +  E++ L DE+      P +     LI+   K + +E A  L ++
Sbjct: 809 AGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 866

Query: 355 ISEQGLSPSVI----TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           ++    S +++    TYN+LI++ C   ++E AF + + M  +GV+P++ ++  LI GL 
Sbjct: 867 VAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 924

Query: 411 REGNV 415
           R   +
Sbjct: 925 RNSKI 929



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 188/478 (39%), Gaps = 71/478 (14%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           S++I++L L      +P      F  AG   G K +    N L+  +V++   +  E   
Sbjct: 92  SLVIEVLRLI----ARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 147

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++++    E+     N ++   C+ G  + A + +  +K     P   TYN LI  + K 
Sbjct: 148 QQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 207

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A  + ++M    +  +  T        CK      A+ + E   +       
Sbjct: 208 D---RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDT 261

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y  LI+GLC     +EA+   + M A+   PNVVT + L+ G   KK + + + + + 
Sbjct: 262 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 321

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------ 408
           +  +G  PS   +N+L+ AYC  G    A+ +   M+  G +P    YN LI        
Sbjct: 322 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381

Query: 409 -----------------------------------LSREGNVEGVRNIMNELVNNGMRAG 433
                                              L   G  E   +++ E++  G    
Sbjct: 382 SLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 441

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TY+ ++  LC   K + A  L +E   M++     ++ TY +++  FC+ G +E A  
Sbjct: 442 TSTYSKVLNYLCNASKMELAFLLFEE---MKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498

Query: 494 LLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             NE+ E G  PN  TY                  + E M+ +G +P+I  +   I G
Sbjct: 499 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +  L  +   +  +     +V+   +++  L K GK ++   + + M+ +  + N
Sbjct: 678 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 737

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
           + ++  +++G    GK+    +++E M S GV+P  VTY +LID  CK G +        
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 797

Query: 238 ------------GKMYKADAVFKDMVENGILPNEV----------TFNTLIDGFCKDENI 275
                       G     +   K+ +E+  L +E+           +  LID   K + +
Sbjct: 798 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 857

Query: 276 SAAMKVFEEMGSHGIAAGVV----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             A+++ EE+ +   +A +V    TYNSLI  LC+  K++ A  L  EM   G+ P + +
Sbjct: 858 EMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 915

Query: 332 SNALINGFCKKKLVEKARVLFDDISE 357
             +LI G  +   + +A +L D IS 
Sbjct: 916 FCSLIKGLFRNSKISEALLLLDFISH 941


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   + + + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++       +C ++L  LVK   F  V   Y+E+   
Sbjct: 71  GLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           +K  +    M  +G+ P+  T++ LI+G CK+  +  A ++FEEM   G+    VT+ +L
Sbjct: 191 FKLKSA---MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  + +A  L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +M E+++ G++    TY +++   CK G   K   LL E   M+++   P++VT
Sbjct: 368 MMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHAPSVVT 418



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/281 (36%), Positives = 162/281 (57%), Gaps = 11/281 (3%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A +++++E G   +   FN L+  FCK+ +I  A  VF+ +   G+   VV+YN+L+NG 
Sbjct: 122 AFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGY 181

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G L+E   L+  M ASG++P+V T + LING CK+  ++ A  LF+++  +GL P+ 
Sbjct: 182 IRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNG 241

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+ TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G +    ++M+E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE 301

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIK 480
           +   G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI 
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALIS 354

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G CQ+G+  DA  ++ E+L  GL P+  TY ++  E  +KG
Sbjct: 355 GLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKG 395



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   +L  L K    N    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWA 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKEGDI---RLAQSVFDAITKWGLRPSVVSYNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  +++   K+   M + G+   V TY+ LINGLC + K+D+A  L +EM+  GL P
Sbjct: 180 GYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G +  A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLM 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  ++ EM     +   P+  TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 360 GRSVDAEKMMREMLSFGLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 145/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKM 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L      +   A  +E++  G   ++   N L++ FCK+  +  A+ +FD I++ GL
Sbjct: 108 LEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV++YNTL++ Y + G + + F ++++M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +  E++  G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLS---QSLLPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L  A+ L++E+  KGL P++ TY
Sbjct: 285 GLCKKGALNQAHDLMDEMSMKGLKPDKITY 314



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 114/269 (42%), Gaps = 45/269 (16%)

Query: 296 TYNSLINGLCVDGKLDEA-------VALRDEMMASGL-----------KPNVVTSNALIN 337
           +Y ++I+ LC      EA       V+ + +  AS +           + ++   + LI 
Sbjct: 15  SYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFSGLIT 74

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + +   +  A   +    E        T   +++   K       +A    +L+ G   
Sbjct: 75  AYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPA 134

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            +  +N L+    +EG++   +++ + +   G+R  +V+YN L+    + G        L
Sbjct: 135 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-------L 187

Query: 458 DEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
           +E FK    M      P++ TY+VLI G C++ K++DAN L  E+L KGL+PN  T+   
Sbjct: 188 NEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTL 247

Query: 513 ---------------VREEMMEKGFIPDI 526
                          V ++M+ +  +PD+
Sbjct: 248 IDGHCKNGRVDLAMEVYKQMLSQSLLPDL 276


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 217/412 (52%), Gaps = 6/412 (1%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           +H L   + + + +S L + V      S S +F A+     +   +  +   L+ AY+++
Sbjct: 1   IHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLES 60

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                  E +     + L     +C ++L  L+K   F+ V   Y+E+       +L  F
Sbjct: 61  GFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFF 120

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N +++  CK G +  A  + + +   G+ P  V+YN L++GY + G + + ++  +    
Sbjct: 121 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSA--- 177

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G+
Sbjct: 178 MLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 237

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D A+ +  +M++  L P+++T N LI G CKK  +++A  L DD+S +GL P  ITY T
Sbjct: 238 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 297

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LID  CKEG +  AF  R  ++   +  D   Y  LI+GL +EG       ++ E+++ G
Sbjct: 298 LIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 357

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +     TY +++   CK G   K   LL E   M+++   P++VTYNVL+ G
Sbjct: 358 LNPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVTYNVLMNG 406



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 164/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+    V+YN+L+NG   
Sbjct: 105 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIR 164

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 165 LGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVT 224

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++++ 
Sbjct: 225 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 284

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G     VS  +   ++ +E    + V Y  LI G CQ+G
Sbjct: 285 RKGLKPDKITYTTLIDGCCKEG---VLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEG 341

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 342 RSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 376



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y   ++ ++ +  D+   VL  L K         
Sbjct: 44  RSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWG 103

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 104 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSAVSYNTLMN 160

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +   +    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 161 GYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVP 220

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 221 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 280

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG +         L+   +R   V Y  L+  LC++
Sbjct: 281 DDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQE 340

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +      P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 341 GRSVDAEKMLREMLSVGLN---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 397

Query: 508 TTYQIV 513
            TY ++
Sbjct: 398 VTYNVL 403



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 152/283 (53%), Gaps = 5/283 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H +     T   +
Sbjct: 29  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKV 88

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E++  G   ++   N L++ FCK   +  A+ +FD I++ GL
Sbjct: 89  LEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 148

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PS ++YNTL++ Y + G +++ F ++++ML  GV PDV TY+ LI GL +E  ++    
Sbjct: 149 RPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADE 208

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E++  G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 209 LFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLLPDLITYNTLIY 265

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           G C+KG L+ A+ L++++  KGL P++ TY  + +   ++G +
Sbjct: 266 GLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVL 308



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA           +     T   ++  L +    + V     
Sbjct: 47  IYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYE 106

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P+ V+YN L+ 
Sbjct: 107 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRPSAVSYNTLMN 160

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L + +L  G+ P+  TY +                + +EM+ KG +P
Sbjct: 161 GYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVP 220

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 221 NGVTFTTLIDGHCKN 235


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 233/503 (46%), Gaps = 68/503 (13%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + +F   +++  K GK      +F+ +      LC ++     L+L + +N K    F
Sbjct: 195 PSLLTFNTMINILCKKGKVQEAVLVFNKIF--QFDLCPDAFTYTSLILGHCRNRKLDKAF 252

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F R    G   + ++ + L+  L  EG+  +   + +EM  + IE  + ++   ++ L
Sbjct: 253 EVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSL 312

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C  G+++ A +++  M   G SP V TY  +I G  + G   KM  A  ++  M++ G++
Sbjct: 313 CDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAG---KMELAIGMYHKMLKEGLV 369

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+N LI+  C +     A+K+F+ M  HG  A   TYN +I GL     +++A+ +
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVV 429

Query: 317 RDEMMASGLKPNVVTSNA-----------------------------------LINGFCK 341
            ++M+  G  P VVT N                                    LI+GFCK
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              ++ A   F ++ + G+SP+  TY  +ID YCKEG+++ A ++   M + G    + T
Sbjct: 490 GGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIET 549

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN +I+GLS+            ++   G++   +TY  L+  LCK+  +  A  +  E  
Sbjct: 550 YNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE-- 607

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------- 510
            MEK+   PN  TY  LI G CQ+GK++ A      L E G  P   TY           
Sbjct: 608 -MEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREG 662

Query: 511 ------QIVREEMMEKGFIPDIE 527
                 Q+V E M EKG  P +E
Sbjct: 663 RSNEASQLV-ENMKEKGLSPSME 684



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 251/552 (45%), Gaps = 62/552 (11%)

Query: 1   PFCSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRAS 60
           P    N  +  +   +R HH SK+ NT  NT               L++F W +K     
Sbjct: 54  PHWPKNPELNRLASTLRPHHVSKIINTHINTDT------------ALQFFYWISKRHFYK 101

Query: 61  HSLLLTGRLLHSLV---VAKKYPKIRSFLHMFVKN-GKFTSVSTIFHALSTCSDSLCRNS 116
           H +     +L+ LV   +      +R  +    +N  +   V+   H +S+    L   +
Sbjct: 102 HDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFT 161

Query: 117 II-IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           +   + L+L   K          + +    G+K S+L+ N ++  L K+GK ++   V+ 
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 176 EMKRRRIELNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           ++   + +L  D+F +  ++ G C+  KL+KA ++ + M   G +P  VTY+ LI+G C 
Sbjct: 222 KI--FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCN 279

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G IG   +A  + ++M E GI P   T+   I   C    +  A+ +   MG  G +  
Sbjct: 280 EGRIG---EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPS 336

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL--------- 344
           V TY ++I+GL   GK++ A+ +  +M+  GL PN VT NALIN  C +           
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396

Query: 345 --------------------------VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
                                     +EKA V+F+ + + G SP+V+TYNTLI    K G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            + +A      M +    PD  TY  LI+G  + G ++   +   E++  G+     TY 
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++   CK+GK   A+SL +   +ME+     +I TYN +I G  +  +  +A     ++
Sbjct: 517 AMIDGYCKEGKIDVALSLFE---RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKM 573

Query: 499 LEKGLIPNQTTY 510
            E+GL PN  TY
Sbjct: 574 TEQGLQPNTITY 585



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 189/377 (50%), Gaps = 12/377 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++ N L+   +K G   +       MK    E +  ++  +++G CK GKL+ A
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +    +M   G+SP   TY  +IDGYCK+G   K+  A ++F+ M ENG   +  T+N +
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEG---KIDVALSLFERMEENGCSASIETYNAI 553

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  K    S A K   +M   G+    +TY SLINGLC +   + A  +  EM     
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNC 613

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T  +LI G C++  V+ A    + ++E G  P++ TY+TL+   C+EGR  +A  
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQ 669

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M ++G+ P +  Y  L+    +   V+    I N +   G +  L  Y +L+ ALC
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC 729

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              ++++A+++   + K    K+W  +++ + VL+ G  Q+G  +     L  +  +   
Sbjct: 730 GVSRAEEALNIFQSLLK----KQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCT 785

Query: 505 PNQTTYQIVREEMMEKG 521
           P+  TY I+  E+ + G
Sbjct: 786 PSLHTYIILARELSKVG 802



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 217/446 (48%), Gaps = 17/446 (3%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P ++++  +     + GK      ++H +    + L  N++  + L+       +  +  
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKM--LKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F     +G  ++  + NQ+++ L      E    V+ +M +      + ++N ++   
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            K G LN A+  +  MK     P   TY  LI G+CK G   K+  A + F +M++ GI 
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGG---KLDSATSFFYEMLKCGIS 509

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN+ T+  +IDG+CK+  I  A+ +FE M  +G +A + TYN++I+GL    +  EA   
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M   GL+PN +T  +LING CK      A  +F ++ ++   P+  TY +LI   C+
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG+++ A      + + G  P + TY+ L++GL REG       ++  +   G+   +  
Sbjct: 630 EGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEI 685

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y  L+ A CK  K   A+    E+F +   K + P++  Y VLI   C   + E+A  + 
Sbjct: 686 YCSLLVAHCKSLKVDCAL----EIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIF 741

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKG 521
             LL+K    +   + ++ + ++++G
Sbjct: 742 QSLLKKQWNSDLIVWTVLVDGLLQEG 767



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 3/297 (1%)

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G    +  A  V+  +  +G+ P+ +TFNT+I+  CK   +  A+ VF ++    +    
Sbjct: 173 GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDA 232

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY SLI G C + KLD+A  + D M+  G  PN VT + LING C +  + +A  + ++
Sbjct: 233 FTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++E+G+ P+V TY   I + C  GR++DA  +  SM  +G  P V TY  +I+GL R G 
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E    + ++++  G+    VTYN L+  LC +G+   A+ + D    ME      N  T
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW---MEGHGTLANAQT 409

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           YN +IKG      +E A  + N++L+ G  P   TY  +  E +++G++ +    +Y
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLY 466



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 142/255 (55%), Gaps = 4/255 (1%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           +FNTL+    K + +++A  V+ ++ S G+   ++T+N++IN LC  GK+ EAV + +++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
               L P+  T  +LI G C+ + ++KA  +FD + + G +P+ +TY+TLI+  C EGR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            +A  M   M ++G+ P V TY   I+ L   G V+   N++  +   G    + TY  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  L + GK + A+ +     KM KE   PN VTYN LI   C +G+   A  + + +  
Sbjct: 344 ISGLFRAGKMELAIGMYH---KMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 501 KGLIPNQTTY-QIVR 514
            G + N  TY QI++
Sbjct: 401 HGTLANAQTYNQIIK 415



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 152/305 (49%), Gaps = 7/305 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  +   ++    KEGK +    +++ M+      +++++N +++GL K  + ++A
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
                 M   G+ P  +TY  LI+G CK       +K   +F +M +   LPN  T+ +L
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK---IFHEMEKKNCLPNAHTYTSL 623

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C++  + AA    E +  +G    + TY++L++GLC +G+ +EA  L + M   GL
Sbjct: 624 IYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGL 679

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++    +L+   CK   V+ A  +F+ ++ +G  P +  Y  LI A C   R E+A  
Sbjct: 680 SPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALN 739

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  S+L +    D+  +  L+ GL +EG+ +     +  + +      L TY IL   L 
Sbjct: 740 IFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELS 799

Query: 446 KDGKS 450
           K GKS
Sbjct: 800 KVGKS 804



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 12/361 (3%)

Query: 68  RLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R L+ +  +   P  R++  +   F K GK  S ++ F+ +  C  S   N      ++ 
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS--PNQWTYTAMID 520

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K  K  +    F+R  + G  +S+ + N ++  L K  +F + E    +M  + ++ 
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++  ++NGLCK    N A  I  +M+     P   TY  LI G C++G      K D
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG------KVD 634

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A  + + ENG  P   T++TL+ G C++   + A ++ E M   G++  +  Y SL+   
Sbjct: 635 AA-ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C   K+D A+ + + M   G +P++     LI   C     E+A  +F  + ++  +  +
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I +  L+D   +EG  +        M  R   P + TY  L   LS+ G   G   I N 
Sbjct: 754 IVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNR 813

Query: 425 L 425
           L
Sbjct: 814 L 814


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 49/487 (10%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSD------------SL 112
           R+L+ +++   YP  +   S +H +  +G  +    +   +  C              S+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 113 C--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           C  ++S+  D+L LA           +A+      G+  + ++ +   R L   GK+E  
Sbjct: 418 CGDKDSLNCDLLDLAE----------KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             V +EM  +    +  +++ VLN LC A K+  A  + E+MK  G+   V TY I++D 
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK G I +  K    F +M E G  PN VT+  LI  + K + +S A ++FE M S G 
Sbjct: 528 FCKAGLIEQARKW---FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS----------------GLKPNVVTSNA 334
              +VTY++LI+G C  G++++A  + + M  S                  +PNVVT  A
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++GFCK   VE+AR L D +S +G  P+ I Y+ LID  CK G++++A  ++  M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TY+ LI    +    +    ++++++ N     +V Y  ++  LCK GK+ +A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L   M  ME++   PN+VTY  +I GF   GK+E    LL  +  KG+ PN  TY+++ 
Sbjct: 765 KL---MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 822 DHCCKNG 828



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 224/461 (48%), Gaps = 38/461 (8%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L  A KY K  S +   +  G     ST    L    + LC  S     + LA+      
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL----NYLCNAS----KMELAF------ 503

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            L FE  KR G   L + V +   ++ +  K G  E     + EM+      N+ ++  +
Sbjct: 504 -LLFEEMKRGG---LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------- 242
           ++   KA K++ A+++ E M S G  P +VTY+ LIDG+CK G + K  +          
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619

Query: 243 ---ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
               D  FK   +N   PN VT+  L+DGFCK   +  A K+ + M   G     + Y++
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GLC  GKLDEA  ++ EM   G    + T ++LI+ + K K  + A  +   + E  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            +P+V+ Y  +ID  CK G+ ++A+ +   M ++G  P+V TY  +I G    G +E   
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVL 478
            ++  + + G+    VTY +L+   CK+G    A +LL+EM    K+  WP +   Y  +
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM----KQTHWPTHTAGYRKV 855

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           I+GF    +  ++ GLL+E+ +    P  + Y+++ + +++
Sbjct: 856 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/620 (22%), Positives = 253/620 (40%), Gaps = 123/620 (19%)

Query: 5   ANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLL 64
           A S ++D+          + +     ++++++    A P  ++ +F W+ +++   H+  
Sbjct: 107 AVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAP 166

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +   L+  +V          FL     + K      +F                +++L+ 
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEF-------------LNVLVR 208

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +N    +  E   R  D+  + S  + N L++A +K  + +    +++EM    + +
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268

Query: 185 N-----------------------LDSFNFV---------LNGLCKAGKLNKASDIMEDM 212
           +                       +++ NFV         ++GLC+A    +A D +  M
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328

Query: 213 KSLGVSPKVVTY-----------------------------------NILIDGYCKKGGI 237
           ++    P VVTY                                   N L+  YC  G  
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN------ISAAMKVFEEMGSHGIA 291
              YK   + K MV+ G +P  V +N LI   C D++      +  A K + EM + G+ 
Sbjct: 389 SYAYK---LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +  +S    LC  GK ++A ++  EM+  G  P+  T + ++N  C    +E A +L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+++   GL   V TY  ++D++CK G +E A    N M + G  P+V TY  LI    +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----------- 460
              V     +   +++ G    +VTY+ L+   CK G+ +KA  + + M           
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 461 -FKM-EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------- 510
            FK  +   + PN+VTY  L+ GFC+  ++E+A  LL+ +  +G  PNQ  Y        
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 511 --------QIVREEMMEKGF 522
                   Q V+ EM E GF
Sbjct: 686 KVGKLDEAQEVKTEMSEHGF 705



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 11/305 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+    K  K     E      ++G  +++ + + L+    K  + +    V 
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M+ M+  G  P VVTY  +IDG+   
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF--- 789

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G IGK+     + + M   G+ PN VT+  LID  CK+  +  A  + EEM         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y  +I G   + +  E++ L DE+      P +     LI+   K + +E A  L ++
Sbjct: 850 AGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 355 ISEQGLSPSVI----TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           ++    S +++    TYN+LI++ C   ++E AF + + M  +GV+P++ ++  LI GL 
Sbjct: 908 VAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965

Query: 411 REGNV 415
           R   +
Sbjct: 966 RNSKI 970



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 189/478 (39%), Gaps = 71/478 (14%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           S++I++L L      +P      F  AG   G K +    N L+  +V++   +  E   
Sbjct: 133 SLVIEVLRLI----ARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++++    E+  +  N ++   C+ G  + A + +  +K     P   TYN LI  + K 
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A  + ++M    +  +  T        CK      A+ + E   +       
Sbjct: 249 D---RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDT 302

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y  LI+GLC     +EA+   + M A+   PNVVT + L+ G   KK + + + + + 
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------ 408
           +  +G  PS   +N+L+ AYC  G    A+ +   M+  G +P    YN LI        
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 409 -----------------------------------LSREGNVEGVRNIMNELVNNGMRAG 433
                                              L   G  E   +++ E++  G    
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TY+ ++  LC   K + A  L +E   M++     ++ TY +++  FC+ G +E A  
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEE---MKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 494 LLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             NE+ E G  PN  TY                  + E M+ +G +P+I  +   I G
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +  L  +   +  +     +V+   +++  L K GK ++   + + M+ +  + N
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
           + ++  +++G    GK+    +++E M S GV+P  VTY +LID  CK G +        
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838

Query: 238 ------------GKMYKADAVFKDMVENGILPNEV----------TFNTLIDGFCKDENI 275
                       G     +   K+ +E+  L +E+           +  LID   K + +
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898

Query: 276 SAAMKVFEEMGSHGIAAGVV----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             A+++ EE+ +   +A +V    TYNSLI  LC+  K++ A  L  EM   G+ P + +
Sbjct: 899 EMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956

Query: 332 SNALINGFCKKKLVEKARVLFDDISE 357
             +LI G  +   + +A +L D IS 
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFISH 982


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 247/467 (52%), Gaps = 24/467 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMF---VKNGKF-TSVSTI--FHALSTCSDSLCRNSIIIDML 122
             H ++    +P I+ F  +F    K+  F T++S I   H+L      +C  +I+I+ L
Sbjct: 63  FFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCL 122

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL------LRALVKEGKFEDVEYVYKE 176
                +  K  LGF         GL+ ++++ N +      +  L K G         K+
Sbjct: 123 ----CRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKK 178

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M +R +E N+  +N +L+GLCK G + +A  +  +M  + V P VVTYN LI G C  G 
Sbjct: 179 MVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLC--GE 236

Query: 237 IGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
           +G   +   +F +MV E GI+P+  TF+ L++GFCK+  +  A  +   M   G+   VV
Sbjct: 237 VGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVV 296

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMM--ASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           TYNSLI+G C+  +++EAV + D M+    G  P+VVT N+LI+G+CK K V KA  L  
Sbjct: 297 TYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLS 356

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++  +GL P V T+ +LI  + + G+   A  +  +M D+G +P + T   ++ GL +  
Sbjct: 357 EMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCW 416

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
                  +   +  +G+   +V YNI++  +CK GK   A  LL   F + K  K  +  
Sbjct: 417 LDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLS--FVLVKGLKIDS-Y 473

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           T+N++IKG C++G L+DA  LL ++ E G  PN+ +Y +  + ++ K
Sbjct: 474 TWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRK 520



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 192/379 (50%), Gaps = 39/379 (10%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG---IGKMYKAD 244
           + N ++N LC+  K      ++  M  +G+ P +VT N + +G C   G   IG    A 
Sbjct: 114 TLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGAL 173

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              K MV+  + PN V +N ++DG CK   +  A+ +F EMG   +   VVTYN LI GL
Sbjct: 174 ESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGL 233

Query: 305 CVD-GKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           C + G   E V L +EM+A  G+ P+V T + L+NGFCK+ L+ +A  +   +   G+  
Sbjct: 234 CGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVEL 293

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSML--DRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +V+TYN+LI  YC   RME+A  + + M+    G LP V TYN LI G  +   V    +
Sbjct: 294 NVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMS 353

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL-------------------LDEMF 461
           +++E+V  G+   + T+  L+G   + GK   A  L                   LD ++
Sbjct: 354 LLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLY 413

Query: 462 K-------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K             MEK     +IV YN+++ G C+ GKL DA  LL+ +L KGL  +  
Sbjct: 414 KCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSY 473

Query: 509 TYQIVREEMMEKGFIPDIE 527
           T+ I+ + +  +G + D E
Sbjct: 474 TWNIMIKGLCREGLLDDAE 492



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 191/376 (50%), Gaps = 26/376 (6%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE-GKFE 168
           D LC+  ++ + L L Y                G   ++ +V++ N L++ L  E G + 
Sbjct: 196 DGLCKRGLVGEALGLFY--------------EMGVVNVEPNVVTYNCLIQGLCGEVGGWR 241

Query: 169 DVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +   ++ EM   + I  ++ +F+ ++NG CK G L +A  ++  M  +GV   VVTYN L
Sbjct: 242 EGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSL 301

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I GYC +    +M +A  VF  MV  G   LP+ VT+N+LI G+CK + ++ AM +  EM
Sbjct: 302 ISGYCLRN---RMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEM 358

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+   V T+ SLI G    GK   A  L   M   G  P + T   +++G  K  L 
Sbjct: 359 VGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLD 418

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  LF  + + GL   ++ YN ++D  CK G++ DA  + + +L +G+  D  T+N +
Sbjct: 419 SEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIM 478

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL REG ++    ++ ++  NG      +YN+ V  L +    K  +S   +  ++ K
Sbjct: 479 IKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR----KYDISRSRKYLQIMK 534

Query: 466 EKKWP-NIVTYNVLIK 480
           +K +P +  T  +LI+
Sbjct: 535 DKGFPVDATTAELLIR 550



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 29/253 (11%)

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           AA     NS+      D  +  +V     M+     P +   N L     K +    A  
Sbjct: 38  AARTRLLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAIS 97

Query: 351 LFDDISEQGLS-PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN------ 403
           L   +   G     V T N LI+  C+  +    FA+   M   G+ P + T N      
Sbjct: 98  LIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGL 157

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           C++ GL + G+  G    + ++V   +   +V YN ++  LCK G   +A+ L  EM  +
Sbjct: 158 CIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVV 217

Query: 464 EKEKKWPNIVTYNVLIKGFC-QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             E   PN+VTYN LI+G C + G   +  GL NE++                   EKG 
Sbjct: 218 NVE---PNVVTYNCLIQGLCGEVGGWREGVGLFNEMVA------------------EKGI 256

Query: 523 IPDIEGHMYNISG 535
           +PD++     ++G
Sbjct: 257 VPDVQTFSILVNG 269


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 235/461 (50%), Gaps = 23/461 (4%)

Query: 58  RASHSL-LLTGRLLHSLVV-AKKYPKIRSFLHMFVKNGKFTSVSTIFHAL---STCSDSL 112
           RA+ +L LL G   H  V  A  Y   ++ +H     G  T  +T+ + +      +D  
Sbjct: 190 RANEALALLRGMARHGCVPDAVLY---QTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
             + ++  M  L  V+            R    G    V++   LL+ L +  + ++   
Sbjct: 247 TFDDVVRGMCGLGRVRE-----AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
             + M  R  ELN+  FN V+ G    GKL +A+++ E M   G  P   TY+IL+ G C
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K   +G++  A  + ++M + G  PN VT+  ++  FCK+        + EEM + G+  
Sbjct: 358 K---LGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
               YN +I  LC DG++DEA+ L  EM + G  P++ + N +I   C  + +E+A  +F
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           +++ E+G+  + ITYNT+I A  ++GR +DA  +   M+  G   DV +YN LI  + ++
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           GNV+    ++ E+   G++   V+YNIL+  LCK+ + + A+ L  +M     +   P+I
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML---NQGLAPDI 591

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           VTYN LI G C+ G +  A  LL +L  + + P+  TY I+
Sbjct: 592 VTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 209/395 (52%), Gaps = 26/395 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ AL  +G   +   +  EM       ++++F+ V+ G+C  G++ +A+ +++ M + G
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+TY  L+ G C+   + +  +A A+   + E     N V FNT+I G   +  ++
Sbjct: 276 CMPGVMTYGFLLQGLCR---VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLA 328

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A +++E MG  G      TY+ L++GLC  G++  AV L  EM   G  PNVVT   ++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + FCK  + +  R L +++S +GL+ +   YN +I A CK+GRM++A  +   M  +G  
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN +I  L     +E   ++   L+  G+ A  +TYN ++ AL +DG+ + AV L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
             EM          ++V+YN LIK  C+ G ++ +  LL E+ EKG+ PN  +Y I    
Sbjct: 509 AKEMILHGCSL---DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 513 ------VRE------EMMEKGFIPDIEGHMYNISG 535
                 VR+      +M+ +G  PDI  +   I+G
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 181/337 (53%), Gaps = 39/337 (11%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++   + EGK  +   +Y+ M  +  + +  +++ +++GLCK G+++ A  ++ +M+ 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 215 LGVSPKVVTYNILIDGYCKKG---------------GI-----------------GKMYK 242
            G +P VVTY I++  +CK G               G+                 G+M +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  + ++M   G  P+  ++NT+I   C +E +  A  +FE +   G+ A  +TYN++I+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            L  DG+  +AV L  EM+  G   +VV+ N LI   CK   V+++ VL ++++E+G+ P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + ++YN LI   CKE R+ DA  +   ML++G+ PD+ TYN LI GL + G +    N++
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            +L N  +   ++TYNIL+   CK       V LLD+
Sbjct: 615 EKLHNENVHPDIITYNILISWHCK-------VRLLDD 644



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 172 YVYKEMKRR-RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILID 229
           ++  ++ RR  ++ +  S+N VL+ L +A     A  +   M     V P   T+ +   
Sbjct: 124 HLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAAR 183

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             C+   +G+  +A A+ + M  +G +P+ V + T+I   C    ++ A  +  EM   G
Sbjct: 184 ALCR---LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            AA V T++ ++ G+C  G++ EA  L D MM  G  P V+T   L+ G C+ +  ++AR
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 350 VLFDDISE-------------------------------QGLSPSVITYNTLIDAYCKEG 378
            +   + E                               +G  P   TY+ L+   CK G
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R+  A  +   M  +G  P+V TY  ++    + G  +  R ++ E+   G+      YN
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++ ALCKDG+  +A+ L+ E   M  +   P+I +YN +I   C   ++E+A  +   L
Sbjct: 421 GMIYALCKDGRMDEAMGLIQE---MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPD 525
           LE+G++ N  TY  +   ++  G   D
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQD 504



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 8/283 (2%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDE 312
           G+ P+  ++N ++    + +  + A+ ++  M     +     T+      LC  G+ +E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+AL   M   G  P+ V    +I+  C +  V +A  L +++   G +  V T++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  GR+ +A  + + M+ +G +P V TY  L+ GL R    +  R ++  +       
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----L 309

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +V +N ++G    +GK  +A  L +    M  +   P+  TY++L+ G C+ G++  A 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYE---TMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            LL E+ +KG  PN  TY IV     + G   D    +  +S 
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 129/241 (53%), Gaps = 9/241 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
            ++   K+G+      +   + +  C+  +C  + II  L      N +       F+  
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL----CNNEQMEEAEHMFENL 477

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + G+ ++ ++ N ++ AL+++G+++D   + KEM      L++ S+N ++  +CK G +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           +++  ++E+M   G+ P  V+YNILI   CK+    ++  A  + K M+  G+ P+ VT+
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKER---RVRDALELSKQMLNQGLAPDIVTY 594

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI+G CK   + AA+ + E++ +  +   ++TYN LI+  C    LD+A  L +  MA
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654

Query: 323 S 323
           +
Sbjct: 655 A 655


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 49/487 (10%)

Query: 68  RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSD------------SL 112
           R+L+ +++   YP  +   S +H +  +G  +    +   +  C              S+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 113 C--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           C  ++S+  D+L LA           +A+      G+  + ++ +   R L   GK+E  
Sbjct: 418 CGDKDSLNCDLLDLAE----------KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             V +EM  +    +  +++ VLN LC A K+  A  + E+MK  G+   V TY I++D 
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK G I +  K    F +M E G  PN VT+  LI  + K + +S A ++FE M S G 
Sbjct: 528 FCKAGLIEQARKW---FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS----------------GLKPNVVTSNA 334
              +VTY++LI+G C  G++++A  + + M  S                  +PNVVT  A
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++GFCK   VE+AR L D +S +G  P+ I Y+ LID  CK G++++A  ++  M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TY+ LI    +    +    ++++++ N     +V Y  ++  LCK GK+ +A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L   M  ME++   PN+VTY  +I GF   GK+E    LL  +  KG+ PN  TY+++ 
Sbjct: 765 KL---MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 822 DHCCKNG 828



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 224/461 (48%), Gaps = 38/461 (8%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L  A KY K  S +   +  G     ST    L    + LC  S     + LA+      
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL----NYLCNAS----KMELAF------ 503

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            L FE  KR G   L + V +   ++ +  K G  E     + EM+      N+ ++  +
Sbjct: 504 -LLFEEMKRGG---LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------- 242
           ++   KA K++ A+++ E M S G  P +VTY+ LIDG+CK G + K  +          
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619

Query: 243 ---ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
               D  FK   +N   PN VT+  L+DGFCK   +  A K+ + M   G     + Y++
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GLC  GKLDEA  ++ EM   G    + T ++LI+ + K K  + A  +   + E  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            +P+V+ Y  +ID  CK G+ ++A+ +   M ++G  P+V TY  +I G    G +E   
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVL 478
            ++  + + G+    VTY +L+   CK+G    A +LL+EM    K+  WP +   Y  +
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM----KQTHWPTHTAGYRKV 855

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           I+GF    +  ++ GLL+E+ +    P  + Y+++ + +++
Sbjct: 856 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/620 (22%), Positives = 253/620 (40%), Gaps = 123/620 (19%)

Query: 5   ANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLL 64
           A S ++D+          + +     ++++++    A P  ++ +F W+ +++   H+  
Sbjct: 107 AVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAP 166

Query: 65  LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +   L+  +V          FL     + K      +F                +++L+ 
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEF-------------LNVLVR 208

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +N    +  E   R  D+  + S  + N L++A +K  + +    +++EM    + +
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268

Query: 185 N-----------------------LDSFNFV---------LNGLCKAGKLNKASDIMEDM 212
           +                       +++ NFV         ++GLC+A    +A D +  M
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328

Query: 213 KSLGVSPKVVTY-----------------------------------NILIDGYCKKGGI 237
           ++    P VVTY                                   N L+  YC  G  
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN------ISAAMKVFEEMGSHGIA 291
              YK   + K MV+ G +P  V +N LI   C D++      +  A K + EM + G+ 
Sbjct: 389 SYAYK---LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +  +S    LC  GK ++A ++  EM+  G  P+  T + ++N  C    +E A +L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+++   GL   V TY  ++D++CK G +E A    N M + G  P+V TY  LI    +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----------- 460
              V     +   +++ G    +VTY+ L+   CK G+ +KA  + + M           
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 461 -FKM-EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------- 510
            FK  +   + PN+VTY  L+ GFC+  ++E+A  LL+ +  +G  PNQ  Y        
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 511 --------QIVREEMMEKGF 522
                   Q V+ EM E GF
Sbjct: 686 KVGKLDEAQEVKTEMSEHGF 705



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 11/305 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+    K  K     E      ++G  +++ + + L+    K  + +    V 
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M+ M+  G  P VVTY  +IDG+   
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF--- 789

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G IGK+     + + M   G+ PN VT+  LID  CK+  +  A  + EEM         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y  +I G   + +  E++ L DE+      P +     LI+   K + +E A  L ++
Sbjct: 850 AGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 355 ISEQGLSPSVI----TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           ++    S +++    TYN+LI++ C   ++E AF + + M  +GV+P++ ++  LI GL 
Sbjct: 908 VAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965

Query: 411 REGNV 415
           R   +
Sbjct: 966 RNSKI 970



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 189/478 (39%), Gaps = 71/478 (14%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           S++I++L L      +P      F  AG   G K +    N L+  +V++   +  E   
Sbjct: 133 SLVIEVLRLI----ARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++++    E+  +  N ++   C+ G  + A + +  +K     P   TYN LI  + K 
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               ++  A  + ++M    +  +  T        CK      A+ + E   +       
Sbjct: 249 D---RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDT 302

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y  LI+GLC     +EA+   + M A+   PNVVT + L+ G   KK + + + + + 
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------ 408
           +  +G  PS   +N+L+ AYC  G    A+ +   M+  G +P    YN LI        
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 409 -----------------------------------LSREGNVEGVRNIMNELVNNGMRAG 433
                                              L   G  E   +++ E++  G    
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TY+ ++  LC   K + A  L +E   M++     ++ TY +++  FC+ G +E A  
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEE---MKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 494 LLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             NE+ E G  PN  TY                  + E M+ +G +P+I  +   I G
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +  L  +   +  +     +V+   +++  L K GK ++   + + M+ +  + N
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
           + ++  +++G    GK+    +++E M S GV+P  VTY +LID  CK G +        
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838

Query: 238 ------------GKMYKADAVFKDMVENGILPNEV----------TFNTLIDGFCKDENI 275
                       G     +   K+ +E+  L +E+           +  LID   K + +
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898

Query: 276 SAAMKVFEEMGSHGIAAGVV----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             A+++ EE+ +   +A +V    TYNSLI  LC+  K++ A  L  EM   G+ P + +
Sbjct: 899 EMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956

Query: 332 SNALINGFCKKKLVEKARVLFDDISE 357
             +LI G  +   + +A +L D IS 
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFISH 982


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 217/409 (53%), Gaps = 8/409 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS+    L+  + KN     GF   +     GL+  V   + L+     +G  E  + ++
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R+ +  N+ +++ ++N LCK  K  +A+ +++ M    V P VV Y +L DG  K 
Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN 317

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +   A  V   MV+ G  PN VT+N +I+G CK+  +  A+ + E M   G    V
Sbjct: 318 G---RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDV 374

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMAS--GLKPNVVTSNALINGFCKKKLVEKARVLF 352
           VTY++L+ GLC  GK+DEAV L + +M+    +KP+V   N +I   CK++ +  A+ ++
Sbjct: 375 VTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVY 434

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + E+G   +++TYN LID Y   G++  A  +    +D G+ P+ +TY  LI GL + 
Sbjct: 435 YTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKM 494

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             +   + + N+   +G R  +  YN L+ +LC++   ++A +L  EM     +   P++
Sbjct: 495 QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD---PDV 551

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           V++N++I G  + G +E A  LL E+L   L+P+  T+ I+    ++ G
Sbjct: 552 VSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 189/343 (55%), Gaps = 4/343 (1%)

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           +R   LN+ +FN +L G C++G  +KA D+   MK   + P  V+YN +I+G CK     
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGK--- 178

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ +A  +FK+M      PN VTF+ LIDGFCK+ ++     + EEM   G+   V  Y+
Sbjct: 179 RLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYS 238

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI+G C  G ++    L +EM+   + PNVVT + L+N  CKK+  ++A  + D ++  
Sbjct: 239 ALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGC 298

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            + P V+ Y  L D   K GR  DA  + + M+ RG  P+  TYN +I GL +EG V+  
Sbjct: 299 KVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDA 358

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             I+  +   G +  +VTY+ LV  LC  GK  +AV LL+ +   E   K P++  +N++
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIK-PDVFAFNLV 417

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I+  C++ +L  A  +   ++E+G   N  TY I+ +  +  G
Sbjct: 418 IQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 222/436 (50%), Gaps = 22/436 (5%)

Query: 81  KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           K + + H+   + K  SVS +F   ++ S            L+ ++V   KP   F    
Sbjct: 71  KAKHYDHVISVHSKMASVS-VFPCFTSLS-----------ALIESFVNTQKPSFAFGVLG 118

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                G   +V + N LL+   + G       ++  MKR  +  +  S+N V+NGLCK  
Sbjct: 119 LIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGK 178

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +L +A ++ ++MK     P  VT++ LIDG+CK G + + +    + ++M + G+  +  
Sbjct: 179 RLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF---GLLEEMEKMGLEGDVF 235

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            ++ LI GFC   +I    ++F EM    +   VVTY+ L+N LC   K  EA  + D M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
               ++P+VV    L +G  K      A  + D + ++G  P+ +TYN +I+  CKEGR+
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN--GMRAGLVTYN 438
           +DA  +  +M  +G  PDV TY+ L+ GL   G ++   +++N L++    ++  +  +N
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNE 497
           +++  LCK  + + A  +   M     E+ +P NIVTYN+LI G+   GKL  A  L  +
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMV----ERGFPSNIVTYNILIDGYLSAGKLTKALELWKD 471

Query: 498 LLEKGLIPNQTTYQIV 513
            ++ G+ PN  TY ++
Sbjct: 472 AVDSGISPNAATYTVL 487



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 8/392 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    LM A  K  K     +         ++  V++   L   L K G+  D   V 
Sbjct: 268 NVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVL 327

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M +R  E N  ++N ++NGLCK G+++ A  I+E M   G  P VVTY+ L+ G C  
Sbjct: 328 DLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLC-- 385

Query: 235 GGIGKMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
            G+GK+ +A  +   ++  E  I P+   FN +I   CK   +  A +V+  M   G  +
Sbjct: 386 -GVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPS 444

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            +VTYN LI+G    GKL +A+ L  + + SG+ PN  T   LING CK +++  A+ LF
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           +     G  P+V  YNTL+ + C+E  +E A  +   M +    PDV ++N +I G  + 
Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G+VE  + ++ E++N  +    +T++IL+    K G+  +A SL + M         P+ 
Sbjct: 565 GDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSC---GHVPDA 621

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           V ++ L+KG+  KGK E    +L ++ +K ++
Sbjct: 622 VLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 173/326 (53%), Gaps = 6/326 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S N +++ L KA   +    +   M S+ V P   + + LI+ +       K   A  V 
Sbjct: 61  SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFV---NTQKPSFAFGVL 117

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             +++ G   N   FN L+ GFC+  +   AM +F  M  + +    V+YN++INGLC  
Sbjct: 118 GLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKG 177

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +L EA  L  EM     KPN VT +ALI+GFCK   VE+   L +++ + GL   V  Y
Sbjct: 178 KRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVY 237

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + LI  +C +G +E    + N ML + V P+V TY+CL+  L ++   +    +++ +  
Sbjct: 238 SALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTG 297

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +R  +V Y +L   L K+G++  A+ +LD M K  +E   PN VTYN +I G C++G+
Sbjct: 298 CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE---PNNVTYNAIINGLCKEGR 354

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIV 513
           ++DA G+L  + +KG  P+  TY  +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTL 380



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMY-KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           P   + N LID   K     K Y    +V   M    + P   + + LI+ F   +  S 
Sbjct: 57  PSYSSCNTLIDNLRK----AKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSF 112

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  V   +   G    V  +N L+ G C  G   +A+ L   M  + L P+ V+ N +IN
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK K + +A+ LF ++      P+ +T++ LID +CK G +E+ F +   M   G+  
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV  Y+ LI+G   +G++E  + + NE++   +   +VTY+ L+ ALCK  K K+A  +L
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           D M      K  P++V Y VL  G  + G+  DA  +L+ ++++G  PN  TY  +   +
Sbjct: 293 DTMTGC---KVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349

Query: 518 MEKGFIPDIEG 528
            ++G + D  G
Sbjct: 350 CKEGRVDDALG 360



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 159/302 (52%), Gaps = 5/302 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD--SFNFVLNGLCKAGKLN 203
           G K  V++ + L++ L   GK ++   +   +  +   +  D  +FN V+  LCK  +L 
Sbjct: 369 GKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLR 428

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M   G    +VTYNILIDGY   G   K+ KA  ++KD V++GI PN  T+ 
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAG---KLTKALELWKDAVDSGISPNAATYT 485

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+G CK + +S A  +F +  + G    V  YN+L+  LC +  +++A  L  EM  +
Sbjct: 486 VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
              P+VV+ N +I+G  K   VE A+ L  ++    L P  IT++ LI+ + K G++++A
Sbjct: 546 NHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEA 605

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            ++   M+  G +PD   ++ L+ G S +G  E V +++ ++ +  +       + ++  
Sbjct: 606 ASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILAC 665

Query: 444 LC 445
           LC
Sbjct: 666 LC 667



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 32/264 (12%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++ +K  V + N +++ L K+ +    + VY  M  R    N+ ++N +++G   AGKL 
Sbjct: 404 EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCK-------KGGIGK----------------- 239
           KA ++ +D    G+SP   TY +LI+G CK       KG   K                 
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM 523

Query: 240 --------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                   + +A  +F++M      P+ V+FN +IDG  K  ++ +A ++  EM +  + 
Sbjct: 524 ASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLV 583

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              +T++ LIN     G+LDEA +L + M++ G  P+ V  ++L+ G+  K   EK   +
Sbjct: 584 PDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSM 643

Query: 352 FDDISEQGLSPSVITYNTLIDAYC 375
              ++++ +       +T++   C
Sbjct: 644 LQQMADKDVVLDSKLTSTILACLC 667


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 195/359 (54%), Gaps = 6/359 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  L  LV+ G+ E+     + M  R    ++     ++ G CK GK  KA+ IME ++ 
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V+TYN+LI G C     G+   A+ +  DMV  G  P+ VTFN LI+  C+   
Sbjct: 148 SGAVPDVITYNVLISGMCS---TGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A+ V E+M  HG     ++YN L++G C + K++ A+    +M + G  P++VT N 
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+   CK   V+ A  L + +S +G SP +ITYNT+ID   K G+ + A  + + M  +G
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + PD+ TY+ L+ GLSREG V+      ++L   G++   +TYN ++  LCK  K+ +A+
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L  M +   +   P   +Y +LI+G   +G  ++A  LLNEL  +G++   +  ++ 
Sbjct: 385 DFLAYMVQRGCK---PTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVA 440



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 184/330 (55%), Gaps = 6/330 (1%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           L+ L + G+L +    +E M   G  P ++    LI G+CK   IGK  KA  + + + +
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCK---IGKTRKATRIMEIIED 147

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G +P+ +T+N LI G C       A K+  +M   G +  VVT+N LIN LC  G L  
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ + ++M   G  PN ++ N L++GFCK+K +E+A      ++ +G  P ++TYNTL+ 
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           A CK+G+++ A  + N +  +G  P + TYN +I GLS+ G  +    +++E+   G++ 
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TY+ LVG L ++GK  +A+    +   +E     PN +TYN ++ G C+  K + A 
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHD---LEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             L  ++++G  P + +Y I+ E +  +G 
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGL 414



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 186/334 (55%), Gaps = 3/334 (0%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           V+N +   GF   +     G    ++ C  L+R   K GK      + + ++      ++
Sbjct: 95  VRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDV 154

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++N +++G+C  G+   A  ++ DM   G SP VVT+NILI+  C+KG +G+   A  V
Sbjct: 155 ITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR---AIDV 211

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            + M ++G  PN +++N L+ GFCK++ +  A++   +M S G    +VTYN+L+  LC 
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           DGK+D AV L +++ + G  P ++T N +I+G  K    ++A  L D++  +GL P +IT
Sbjct: 272 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIIT 331

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y++L+    +EG++++A    + +   GV P+  TYN ++ GL +    +   + +  +V
Sbjct: 332 YSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
             G +    +Y IL+  L  +G +K+A+ LL+E+
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 163/287 (56%), Gaps = 3/287 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    V++ N L+  +   G++ D E +  +M RR    ++ +FN ++N LC+ G L 
Sbjct: 147 DSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG 206

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D++E M   G +P  ++YN L+ G+CK+    KM +A      M   G  P+ VT+N
Sbjct: 207 RAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEK---KMERAIEYLGKMTSRGCYPDIVTYN 263

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+   CKD  + AA+++  ++ S G +  ++TYN++I+GL   GK D+A  L DEM A 
Sbjct: 264 TLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKP+++T ++L+ G  ++  V++A   F D+   G+ P+ ITYN ++   CK  + + A
Sbjct: 324 GLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRA 383

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
                 M+ RG  P  ++Y  LI GL+ EG  +    ++NEL   G+
Sbjct: 384 IDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 3/253 (1%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E+  N  +    ++  +    +  E M   G    ++   SLI G C  GK  +A  + +
Sbjct: 84  EIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIME 143

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  SG  P+V+T N LI+G C       A  L  D+  +G SPSV+T+N LI+  C++G
Sbjct: 144 IIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKG 203

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  A  +   M   G  P+  +YN L+ G  +E  +E     + ++ + G    +VTYN
Sbjct: 204 LLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYN 263

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+ ALCKDGK   AV LL++   +  +   P ++TYN +I G  + GK + A  LL+E+
Sbjct: 264 TLLTALCKDGKVDAAVELLNQ---LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320

Query: 499 LEKGLIPNQTTYQ 511
             KGL P+  TY 
Sbjct: 321 RAKGLKPDIITYS 333


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 249/533 (46%), Gaps = 38/533 (7%)

Query: 11  DITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLL 70
           D   L++    S L +T  + VIL L     +P  I  +F W+      +HSL  +  ++
Sbjct: 26  DWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYTHSLHSSWSMI 85

Query: 71  HSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           H L   + +   +  L    +    +S S +  +L    D    NS ++  +++ Y K+ 
Sbjct: 86  HMLTKHRHFKTAQQVLDKMAQREILSSPS-VLTSLVRIHDDPEVNSHVLSWIVIHYAKSK 144

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
             H   + F++     LK  + +C  L+ +L+K+G    V  VYK M +  +  N+  +N
Sbjct: 145 MTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYN 204

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------- 235
            +++   K+  + +A  I+ +M+  GV P + TYN LI  YCKKG               
Sbjct: 205 CLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMERE 264

Query: 236 GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           GI                 GKM +A  +F ++     +PN VT+ TLIDG+CK      A
Sbjct: 265 GINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEA 322

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +++ E M + G+  GVVTYNS++  LC DG++ +A  L  EM    ++ + VT N LIN 
Sbjct: 323 LRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINA 382

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           +CK   +  A      + E GL+P+  TY  LI  +CK   +E A  +   MLD G  P+
Sbjct: 383 YCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPN 442

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             TY+ ++    ++ N + V  + +E ++ G    +  Y  L+  LCK  + + A  LL 
Sbjct: 443 YRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLL- 501

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
             + ME +    + V Y  L   + + G    A+ +L E+  + L+     Y+
Sbjct: 502 --YHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYR 552



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 197/408 (48%), Gaps = 26/408 (6%)

Query: 131 KPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI------- 182
           +P   F  FK A        S+ S   ++  L K   F+  + V  +M +R I       
Sbjct: 57  EPFFIFHFFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVL 116

Query: 183 ----------ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
                     E+N    ++++    K+   + A  + E M    + P +    +L++   
Sbjct: 117 TSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLL 176

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K G    ++K   V+K MV++G++PN   +N LI    K  ++  A  +  EM   G+  
Sbjct: 177 KDGITSMVWK---VYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVP 233

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            + TYN+LI   C  G   EA++++D+M   G+  ++V+ N+LI GFCK+  + +A  +F
Sbjct: 234 DIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMF 293

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            +I +    P+ +TY TLID YCK    E+A  +R  M+ +G+ P V TYN ++  L  +
Sbjct: 294 GEIKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSD 351

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G +     +++E+    ++A  VT N L+ A CK G    A+    +M +       PN 
Sbjct: 352 GRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLT---PNS 408

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            TY  LI GFC+  +LE A  LL  +L+ G  PN  TY  + +   +K
Sbjct: 409 FTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKK 456



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 7/284 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K  +FE+   + + M  + +   + ++N +L  LC  G++  A+ ++ +M    
Sbjct: 309 LIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERK 368

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFK-DMVENGILPNEVTFNTLIDGFCKDENI 275
           V    VT N LI+ YCK G +    K    FK  M+E G+ PN  T+  LI GFCK   +
Sbjct: 369 VQADSVTCNTLINAYCKIGDLNSALK----FKTKMLEAGLTPNSFTYKALIHGFCKTSEL 424

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            +A ++   M   G +    TY+ +++  C     D  +AL DE ++ G   N+    AL
Sbjct: 425 ESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRAL 484

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I   CK + +E A  L   +  +G+S   + Y +L  +Y K G    A  M   M  R +
Sbjct: 485 IRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRL 544

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +  V  Y C  A  + +  V  +    + +V  G+ +    Y I
Sbjct: 545 MITVKIYRCFSALDASQNKVSQM--FWDHVVERGLMSRNTMYKI 586



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 12/251 (4%)

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E+ SH ++  V+ Y              +AV + ++M    LKP++     L+N   K  
Sbjct: 127 EVNSHVLSWIVIHYAK-------SKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDG 179

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           +      ++  + + G+ P++  YN LI A  K   +E A  + N M  +GV+PD+ TYN
Sbjct: 180 ITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYN 239

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LIA   ++G      ++ +++   G+   +V+YN L+   CK+GK ++A+ +  E+   
Sbjct: 240 TLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--- 296

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             +   PN VTY  LI G+C+  + E+A  L   ++ KGL P   TY  +  ++   G I
Sbjct: 297 --KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRI 354

Query: 524 PDIEGHMYNIS 534
            D    ++ +S
Sbjct: 355 RDANKLLHEMS 365


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 227/456 (49%), Gaps = 71/456 (15%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L   AF+    +G+   V  CN +LRAL    +++D+  V++EM +  IE ++ ++N +L
Sbjct: 152 LCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLL 211

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVS--PKVVTYNILIDGYCKKGGIG---------KMYK 242
           +   K G+ +K + ++++M++ G    P  VTYN++I G  +KG +          ++ K
Sbjct: 212 DSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK 271

Query: 243 ADAVFK----------------------DMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
             + F                       +M   GI+P  VT+N +I G  +   + AA  
Sbjct: 272 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM + G+   V+TYNSL+NG C  G L EA+ L  ++  +GL P V+T N  I+G+C
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYC 391

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLI----------------DAYCKEGRMEDAF 384
           +   +E+AR+L +++ EQG  P+V TY  L+                D    +G   D F
Sbjct: 392 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCF 451

Query: 385 A-------------------MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           A                   +R  ++  G+  D  TYN LI GL + GN++  + +  ++
Sbjct: 452 AYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 511

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V+NG++   +TY  L+ A C+ G  ++A  + + M     +   P+ VT+ V+I  +C++
Sbjct: 512 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI---SDGLLPSAVTFTVIIHAYCRR 568

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G L  A G   ++LE+G+ PN+ TY ++   +   G
Sbjct: 569 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 604



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 221/428 (51%), Gaps = 20/428 (4%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LS  + S   N +I  +L    VK +     ++      + G+  +V++ N ++  L++ 
Sbjct: 269 LSKKASSFTYNPLITGLLARGCVKKV-----YDLQLEMENEGIMPTVVTYNAMIHGLLQS 323

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G  E  +  + EM+   +  ++ ++N +LNG CKAG L +A  +  D++  G++P V+TY
Sbjct: 324 GLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTY 383

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           NI IDGYC+   +G + +A  + ++M E G LPN  T+  L+ G     +++ A + F+E
Sbjct: 384 NIRIDGYCR---LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDE 440

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S G+      YN+ I    + G +  A+ LR+ +M  G+  + VT N LI+G CK   
Sbjct: 441 MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGN 500

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++ A+ L   +   GL P  ITY  LI A+C+ G + +A  + N+M+  G+LP   T+  
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 560

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I    R GN+        +++  G+    +TYN+L+ ALC+ G+++ A     EM    
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML--- 617

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           +     N  TY +LI G C+ G  EDA     E+ + G+ P+  T+         K  + 
Sbjct: 618 ERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTH---------KALVK 668

Query: 525 DIEGHMYN 532
             +GH+++
Sbjct: 669 GFDGHVHH 676



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 55/299 (18%)

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           +  F EM SHG+A  V   N ++  L    + D+  A+ +EM+  G++P++VT N L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 339 FCKKKLVEKARVLFDDISEQGLS--PSVITYNTLIDAYCKEGRMEDA------------- 383
           F K+   +K  +L  ++  +G    P+ +TYN +I    ++G +E+A             
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 384 ---------------------FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
                                + ++  M + G++P V TYN +I GL + G VE  +   
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+   G+   ++TYN L+   CK G  K+A+ L  +   + +    P ++TYN+ I G+
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD---LRRAGLAPTVLTYNIRIDGY 390

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------RE---EMMEKGFIPD 525
           C+ G LE+A  L  E+ E+G +PN  TY I+             RE   EM+ KG  PD
Sbjct: 391 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 237/517 (45%), Gaps = 125/517 (24%)

Query: 137 EAFKRA---GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +AF+ A   G+ G+  ++ +CN L+  L K+ +F + E +++ M  R +E N  ++  ++
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           + LCK G ++ A  + + M+  G+   V  YN LI+GYC+       ++A  +  +MVE 
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHD---NFHQARGLLNEMVEK 434

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+  +++ LI G C+  ++++AM++  EM  +G++  V T+ +LI+G C DG +DEA
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID- 372
             L D+M+ S + PN VT N +I G+C+   V KA  L+D + ++GL+P   TY +LI  
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554

Query: 373 ----------------------------------AYCKEGRMEDAFAMRNSMLDRGVL-- 396
                                              +CKEGR+ + + + + M  RGV   
Sbjct: 555 LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614

Query: 397 ---------------------------------PDVSTYNCLIAGLSREGNVEGVRNIMN 423
                                            PD   + C+I   S+E N+    N  +
Sbjct: 615 LISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWD 674

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF---------------------- 461
           +++ +G    +VTY +L+  LCK G    A  L +EM                       
Sbjct: 675 KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG 734

Query: 462 KMEKEKKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ- 511
           ++EK K            N VT+N LIKGFC+ G+++ A  L+    E G  P+  +Y  
Sbjct: 735 ELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYST 794

Query: 512 IVRE---------------EMMEKGFIPDIEGHMYNI 533
           I+ E               EM+ KG  PDI    YNI
Sbjct: 795 IINELCKVGDINKAFQLWNEMLYKGLKPDIVA--YNI 829



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 48/424 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     + +Q+L AL+K  +F     ++ EM + +  L+   +   +   C+   L+ A
Sbjct: 155 GIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGA 214

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M+S GV    V YN+L+ G C+     ++ +A  V   MVE GI+ +EVT+ TL
Sbjct: 215 RGLLTRMESKGVKGSAVPYNVLMYGLCRN---NRVLEAVEVKNSMVERGIVADEVTYRTL 271

Query: 266 IDGFCKDENISAAMKVFEEM-----------------------------------GSHGI 290
           + GFC+ E +  A+++ ++M                                   G  G+
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGM 331

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +   N+LI+ LC D +  EA  L   M   GL+PN VT   LI+  CK+ +++ A  
Sbjct: 332 VPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALC 391

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +FD + E+G+  +V  YN+LI+ YC+      A  + N M+++G+ P  ++Y+ LIAGL 
Sbjct: 392 MFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLC 451

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R+G++     +  E+  NG+   + T+  L+   CKDG   +A  L D   KM      P
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD---KMIDSSVVP 508

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------IVREEMMEKGFI 523
           N VT+NV+I+G+C+ G +  A  L ++++++GL P+  TY+       +    M  K F+
Sbjct: 509 NEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFV 568

Query: 524 PDIE 527
            D+E
Sbjct: 569 DDLE 572



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 225/506 (44%), Gaps = 53/506 (10%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           RL  S  +A K       L   +K  +F     +F  +  C   L        +     +
Sbjct: 149 RLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEI 208

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           +N+    G     R    G+K S +  N L+  L +  +  +   V   M  R I  +  
Sbjct: 209 RNLDGARGL--LTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEV 266

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----- 242
           ++  ++ G C+  +L  A ++ +DM SL   P V + + ++DG  K+G I K ++     
Sbjct: 267 TYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHL 326

Query: 243 ---------------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
                                      A+ +F+ M   G+ PNEVT+  LI   CK   +
Sbjct: 327 GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMM 386

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ +F+ M   GI   V  YNSLING C      +A  L +EM+  GL P+  + + L
Sbjct: 387 DDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPL 446

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G C+K  +  A  L  +++  G+S +V T+ TLI  +CK+G M++A  + + M+D  V
Sbjct: 447 IAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+  T+N +I G  R GNV     + +++V+ G+     TY  L+  LC    + KA  
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR- 514
            +D+   +E      N  +   L+ GFC++G+L +   + +E+  +G+  +  ++ ++  
Sbjct: 567 FVDD---LENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVY 623

Query: 515 ---------------EEMMEKGFIPD 525
                           EM EKG  PD
Sbjct: 624 AALKLHDGEKISVLFREMKEKGVKPD 649



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 214/473 (45%), Gaps = 91/473 (19%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           SLC+  ++ D L +              F R  + G++ +V   N L+    +   F   
Sbjct: 379 SLCKRGMMDDALCM--------------FDRMREKGIRVTVYPYNSLINGYCQHDNFHQA 424

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +  EM  + +  +  S++ ++ GLC+ G L  A ++  +M   GVS  V T+  LI G
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK G    M +A  +F  M+++ ++PNEVTFN +I+G+C+  N+  A +++++M   G+
Sbjct: 485 FCKDG---NMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 291 AAGVVTYNSLIN-----------------------------------GLCVDGKLDEAVA 315
                TY SLI+                                   G C +G+L E   
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL--------------- 360
           + DEM A G+K ++++   ++    K    EK  VLF ++ E+G+               
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 361 --------------------SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
                               SP+V+TY  LI+  CK G +  A  +   ML    LP+  
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYNC +  L+ EG +E  + +++  +  G  A  VT+N L+   CK G+ + A+ L   M
Sbjct: 722 TYNCFLDFLANEGELEKAK-VLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDL---M 777

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
               +   +P+ ++Y+ +I   C+ G +  A  L NE+L KGL P+   Y I+
Sbjct: 778 QNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL 830



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 196/424 (46%), Gaps = 77/424 (18%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  S  S + L+  L ++G       +++EM R  +  N+ +F  +++G CK G +++A
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + + + M    V P  VT+N++I+GYC+ G + K ++   ++  MV+ G+ P+  T+ +L
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ---LYDQMVDRGLTPDNYTYRSL 551

Query: 266 ID-----------------------------------GFCKDENISAAMKVFEEMGSHGI 290
           I                                    GFCK+  ++    +++EM + G+
Sbjct: 552 ISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGV 611

Query: 291 AAGVVTYNSLING-----------------------------LCV------DGKLDEAVA 315
              ++++  ++                                C+      +  + +A+ 
Sbjct: 612 KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN 671

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             D+M+A G  PNVVT   LIN  CK   +  A++L +++      P+  TYN  +D   
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
            EG +E A  +  ++L+ G L +  T+N LI G  + G ++G  ++M     +G     +
Sbjct: 732 NEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           +Y+ ++  LCK G   KA  L +EM  + K  K P+IV YN+LI+     G+ +   G+ 
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEM--LYKGLK-PDIVAYNILIRWCNIHGEFDKGLGIY 847

Query: 496 NELL 499
           ++++
Sbjct: 848 SDMV 851



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 188/383 (49%), Gaps = 8/383 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K+G     + +F  +     S+  N +  ++++  Y +       F+ + +  D GL 
Sbjct: 485 FCKDGNMDEAARLFDKM--IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLT 542

Query: 149 SSVLSCNQLLRAL-VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
               +   L+  L +  G  +  E+V  +++   + LN  S   ++ G CK G+L +   
Sbjct: 543 PDNYTYRSLISVLCLTLGAMKAKEFV-DDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           I ++M++ GV   ++++ +++    K   +    K   +F++M E G+ P+ V    +ID
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALK---LHDGEKISVLFREMKEKGVKPDNVFHTCMID 658

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
              K+ENI  A+  +++M + G +  VVTY  LIN LC  G L  A  L +EM+     P
Sbjct: 659 VHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLP 718

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N  T N  ++    +  +EKA+VL   I E G   + +T+NTLI  +CK G+++ A  + 
Sbjct: 719 NSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLM 777

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            +  + G  PD  +Y+ +I  L + G++     + NE++  G++  +V YNIL+      
Sbjct: 778 QNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIH 837

Query: 448 GKSKKAVSLLDEMFKMEKEKKWP 470
           G+  K + +  +M  ++     P
Sbjct: 838 GEFDKGLGIYSDMVNLKYADDTP 860



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 135/314 (42%), Gaps = 38/314 (12%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  V +  + +GI   + T + ++    K    + A  +F+EM           Y + I 
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIR 203

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C    LD A  L   M + G+K + V  N L+ G C+   V +A  + + + E+G+  
Sbjct: 204 AYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVA 263

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG----- 417
             +TY TL+  +C+   +E A  M + ML    +P V++ + ++ GL + G+++      
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323

Query: 418 ------------------------------VRNIMNELVNNGMRAGLVTYNILVGALCKD 447
                                            +   + N G+    VTY IL+ +LCK 
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKR 383

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G    A+ + D   +M ++     +  YN LI G+CQ      A GLLNE++EKGL P+ 
Sbjct: 384 GMMDDALCMFD---RMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440

Query: 508 TTYQIVREEMMEKG 521
            +Y  +   +  KG
Sbjct: 441 ASYSPLIAGLCRKG 454


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 218/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   + + + +S +   V      S S +F A+     +   +  +   L+ AY++
Sbjct: 7   MIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLE 66

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 67  SGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYF 126

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 184

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 185 -MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  + +A  L D++S +GL P   TY 
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF  R  M+   +  D   Y  +I+GL +EG       ++ E+++ 
Sbjct: 304 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSV 363

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G   K   LL E   M++    P++ TYNVL+ G
Sbjct: 364 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRNGHVPSVXTYNVLMNG 413



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 172 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 231

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G++     +++E+ 
Sbjct: 232 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMS 291

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  +I G 
Sbjct: 292 MKGLKPDKFTYTTLIDGCCKEGD-------LDAAFEHRKRMIQENIRLDDVAYTAIISGL 344

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 345 CQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 383



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 110

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 167

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 168 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 227

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G +  A  + 
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLI 287

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  ++  LC++
Sbjct: 288 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQE 347

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 348 GRPVDAEKMLREMLSVGLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSV 404

Query: 508 TTYQIV 513
            TY ++
Sbjct: 405 XTYNVL 410



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 3/235 (1%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +  ++ LI      G L +A+          L     T   ++    K +  +     ++
Sbjct: 54  IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 113

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +I E G   S+  +N L+  +CK+G +  A ++ +++   G+ P V +YN L+ G  R G
Sbjct: 114 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 173

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + + ++ +G++  + TY++L+  LCK+ K   A  L DEM     +   PN V
Sbjct: 174 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV---KGLVPNGV 230

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           T+  LI G C+ G+++ A  +  ++L + L+P+  TY  +   + +KG +    G
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHG 285


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 199/378 (52%), Gaps = 6/378 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V + N L+  L + G FE V     +M       +L  +  +++G+CK G    A
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           +DI+  M S G+ P VV YN ++ G C      +  +A+ +  +M +     ++VTFN L
Sbjct: 303 NDILSRMPSYGLKPNVVCYNTVLKGLCSAE---RWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D FC++  +   +++ E+M  HG    V+TY ++ING C +G +DEAV L   M A G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPN ++   ++ G C+ +    A+ L   + +QG  P+ +T+NTLI+  CK+G +E A  
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML  G  PD+ +Y+ +I GL + G  E    ++N ++N G+    + Y+ +  AL 
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++G++ K + + D    ++      +   YN +I   C++ + + A      ++  G +P
Sbjct: 540 REGRTDKIIQMFD---SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 596

Query: 506 NQTTYQIVREEMMEKGFI 523
           N++TY I+   +  +G +
Sbjct: 597 NESTYTILIRGLASEGLV 614



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 218/434 (50%), Gaps = 31/434 (7%)

Query: 111 SLCRNSIIIDMLM------LAYVKNMKP--HLGFEAFKRAGDYGLKSSVLS--------- 153
           SLC   +I D L       L       P  H+  EA  R G  G +S+V +         
Sbjct: 117 SLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG--GFRSAVRALQVLHAKGC 174

Query: 154 ------CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
                 CN ++ A+ ++G  ++   + +++     E ++ S+N VL GLC A + +   +
Sbjct: 175 TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEE 234

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +M +M  +G  P V T+N LI   C+ G   ++++A      M E+G  P+   + T+ID
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA---LSQMPEHGCTPDLRMYATIID 291

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CKD +   A  +   M S+G+   VV YN+++ GLC   + +EA  L  EM       
Sbjct: 292 GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL 351

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + VT N L++ FC+  LV++   L + + E G  P VITY T+I+ +CKEG +++A  + 
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            +M   G  P+  +Y  ++ GL R       + +++ ++  G     VT+N L+  +CK 
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G  ++A+ LL +M         P++++Y+ +I G  + GK E+A  LLN ++ KG+ PN 
Sbjct: 472 GLVEQAIELLKQML---VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 528

Query: 508 TTYQIVREEMMEKG 521
             Y  +   +  +G
Sbjct: 529 IIYSSMASALSREG 542



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 179/397 (45%), Gaps = 35/397 (8%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++R+L   G   D   V  EM  R         + +L   C+ G    A   ++ + + G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 217 VSPKVVTYNILIDGYCKKGGIGK----------------MYKADAVFK------------ 248
            +      N+++   C++G + +                +   +AV K            
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 249 ----DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
               +MV  G  PN  TFNTLI   C++       +   +M  HG    +  Y ++I+G+
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI 293

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C DG  + A  +   M + GLKPNVV  N ++ G C  +  E+A  L  ++ ++      
Sbjct: 294 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 353

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+N L+D +C+ G ++    +   ML+ G +PDV TY  +I G  +EG V+    ++  
Sbjct: 354 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G +   ++Y I++  LC+  +   A  L+  M    ++   PN VT+N LI   C+
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI---QQGCLPNPVTFNTLINFMCK 470

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           KG +E A  LL ++L  G  P+  +Y  V + + + G
Sbjct: 471 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 184/381 (48%), Gaps = 12/381 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+R+L   G+  D     + +        + ++N ++ G C+AG++  A  +   +  
Sbjct: 48  SALIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V P   TY  ++   C +G I     A  V  +M   G        + +++  C+   
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIAD---ALTVLDEMPLRGCAATPPMCHVILEAACRGGG 158

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
             +A++  + + + G        N +++ +C  G +DE V L  ++ + G +P++V+ NA
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           ++ G C  K  +    L  ++   G  P+V T+NTLI   C+ G  E      + M + G
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHG 278

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD+  Y  +I G+ ++G+ E   +I++ + + G++  +V YN ++  LC   + ++A 
Sbjct: 279 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 338

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL EMF   +E    + VT+N+L+  FCQ G ++    LL ++LE G IP+  TY  V 
Sbjct: 339 DLLAEMF---QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
               ++G + +    + N+S 
Sbjct: 396 NGFCKEGLVDEAVMLLKNMSA 416


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 253/548 (46%), Gaps = 74/548 (13%)

Query: 6   NSTIEDITELIRNH-HWSK-LKNTDPNTVILQ------LFNSDADPVLILRYFCWSTKEL 57
           N+ ++DI E++  H  W + L+     + +L       + +   D  L L++F W +   
Sbjct: 28  NNLVKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVS--- 84

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI 117
           R  +S  + G    SL+      ++ S + + ++N +   +S    A+S    +   + +
Sbjct: 85  RGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGL 144

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           +   L L Y   +K +  F              V++CN LL  LVK G            
Sbjct: 145 VEKALELYYFV-LKTYTYF------------PDVIACNSLLNMLVKLG------------ 179

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
              RIE+       ++ GLCK GKL +   ++ED    G  P ++ YN LIDGYCKKG  
Sbjct: 180 ---RIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKG-- 234

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
             M  A+ +F ++   G LP   T+  +I+GFCK  +  A  ++  EM S G+   V  Y
Sbjct: 235 -DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 293

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N++I+     G + +AV   + M+  G KP++VT N LI+G C+   V +A  L +    
Sbjct: 294 NTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 353

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +GL P+  +Y  LI AYCK+G  + A      M +RG  PD+ TY  L+ GL   G V+ 
Sbjct: 354 KGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV 413

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----------------- 460
              I  +++  G+      YNIL+  LCK  K   A  LL EM                 
Sbjct: 414 ALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVD 473

Query: 461 --------------FKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
                         F++  EK   P IV YN +IKG+C+ G ++DA   +N + ++ L P
Sbjct: 474 GFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 533

Query: 506 NQTTYQIV 513
           ++ TY  V
Sbjct: 534 DEFTYSTV 541



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 154/316 (48%), Gaps = 5/316 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K G F ++  +   ++  S  L  N  + + ++ A  K+       E  +   
Sbjct: 260 AIINGFCKKGDFKAIDRLLMEMN--SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 317

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G K  +++ N L+    ++GK  + + + ++   + +  N  S+  +++  CK G  +
Sbjct: 318 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 377

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS+ + +M   G  P +VTY  L+ G    G +     A  + + M+E G+ P+   +N
Sbjct: 378 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV---ALTIREKMLERGVFPDAGIYN 434

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+ G CK   + AA  +  EM    +      Y +L++G   +G LDEA  L +  +  
Sbjct: 435 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 494

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P +V  NA+I G+CK  +++ A    + + ++ L+P   TY+T+ID Y K+  ++ A
Sbjct: 495 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 554

Query: 384 FAMRNSMLDRGVLPDV 399
             M   M+     P+V
Sbjct: 555 QKMFREMVKMKCKPNV 570



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 123/229 (53%), Gaps = 3/229 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +  ++A   GL  +  S   L+ A  K+G ++       EM  R  + +L ++  +++GL
Sbjct: 346 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 405

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
             AG+++ A  I E M   GV P    YNIL+ G CKK    K+  A  +  +M++  +L
Sbjct: 406 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF---KLPAAKLLLAEMLDQSVL 462

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+   + TL+DGF ++ N+  A K+FE     G+  G+V YN++I G C  G + +A+A 
Sbjct: 463 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 522

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            + M    L P+  T + +I+G+ K+  ++ A+ +F ++ +    P+V+
Sbjct: 523 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 211/370 (57%), Gaps = 11/370 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++   ++    K  + +     +++M R  +  N  ++N V+NGLCKA   +KA +
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 208 IMEDMK-SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTL 265
           ++++M+    V+P +VTY+ +I+G+CK+   G+M +A  + ++MV  +GI P+ VT+ ++
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQ---GEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-ASG 324
           +DG C+D  +  A ++  EM   G+     T+++LI G C   K+DEA+ L  E++ +S 
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            KP+VVT  ALI+GFCK   +EKA  +   +  +   P+V+TY++L+   CK G ++ A 
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +G +P+V TY  LI GL     V+  R +M+E+         V+YN L+   
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL-LEKGL 503
           C+ G+ ++A  L  E   M  +   P+ +TY  L++GFC   +LE+A  LL  +    G+
Sbjct: 300 CRLGRIEEAKQLFKE---MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 504 IPNQTTYQIV 513
            P+  TY IV
Sbjct: 357 DPDVVTYSIV 366



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 206/383 (53%), Gaps = 10/383 (2%)

Query: 135 GFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFV 192
            +E  K   D   +   +++ + ++    K+G+ +    + +EM  R  I  ++ ++  V
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLC+ GK+++A +++ +MK  GV P   T++ LI G+C    + +  K   ++K+++ 
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALK---LYKEILT 176

Query: 253 NGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +    P+ VT+  LIDGFCK  N+  AMK+   M        VVTY+SL++GLC  G LD
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+ L   M + G  PNVVT   LI+G C    V+ AR+L D+++     P  ++YN L+
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGM 430
           D YC+ GR+E+A  +   M  +  LPD  TY CL+ G      +E  R ++  +    G+
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTY+I+V    +  +  +A   + EM         PN VTY+ LI G C+ G+++ 
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI---ARNVAPNAVTYSSLIDGLCKAGRVDH 413

Query: 491 ANGLLNELLEKGLIPNQTTYQIV 513
           A  +L  ++ K + P+  T+  V
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSV 436



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 195/365 (53%), Gaps = 8/365 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V++   L+    K G  E    +   M+ R+   N+ +++ +L+GLCKAG L++A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +   M S G  P VVTY  LI G C      K+  A  +  +M      P+ V++N L+D
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLC---AAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLK 326
           G+C+   I  A ++F+EM +       +TY  L+ G C   +L+EA  L + M  A+G+ 
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+VVT + ++ G+ + K   +A     ++  + ++P+ +TY++LID  CK GR++ A  +
Sbjct: 358 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEV 417

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             +M+++ V P V T+N +I  L R G+++    ++  +  +G+  G+VTY  L+    +
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477

Query: 447 DGKSKKAVSLLDEM-FKMEKEKKWPNIV---TYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            G+ + A  L + M  K +K     N+V    ++ LI+G C+  +++ A  ++ EL  + 
Sbjct: 478 TGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRE 537

Query: 503 LIPNQ 507
             P +
Sbjct: 538 CEPAE 542



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 176/358 (49%), Gaps = 48/358 (13%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++ + LL  L K G  +    +++ M  +    N+ ++  +++GLC A K++ A  +M
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M +    P  V+YN L+DGYC+   +G++ +A  +FK+M     LP+ +T+  L+ GF
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCR---LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334

Query: 270 CKD----------ENISAAMKV--------------------------FEEMGSHGIAAG 293
           C            EN+  A  +                           +EM +  +A  
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            VTY+SLI+GLC  G++D A+ +   M+   ++P+V T N++I   C+   +++A  L  
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM--------LDRGVLPDVSTYNCL 405
            ++  GL P ++TY TL++ + + GRME A+ +   M            ++P+   ++ L
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSAL 513

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           I GL +   ++    ++ EL +            +V  L + G++++A  L++ + K+
Sbjct: 514 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 571



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 52/357 (14%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S LH   K G       +F  +++  C  ++   + +I  L  A+  +    L  E    
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
                     +S N LL    + G+ E+ + ++KEM  +    +  ++  ++ G C A +
Sbjct: 284 C----CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR 339

Query: 202 LNKASDIMEDMKSL-GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           L +A  ++E+MK+  G+ P VVTY+I++ GY +     +  +A    ++M+   + PN V
Sbjct: 340 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK---RFVEAAEFIQEMIARNVAPNAV 396

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+++LIDG CK   +  AM+V + M +  +   V T+NS+I  LC  G +DEA  L   M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456

Query: 321 MASGLKPNVVTS------------------------------------------NALING 338
            A GL+P +VT                                           +ALI G
Sbjct: 457 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRG 516

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
            CK + ++KA  + +++  +   P+      ++D   + GR E+A  + NS+   G+
Sbjct: 517 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 246/489 (50%), Gaps = 11/489 (2%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           + L N   + V+ +  N+   P L+L ++ W  ++    HSL ++  ++H LV +++Y  
Sbjct: 78  ASLTNALVSRVVCEFRNT---PQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDD 134

Query: 82  IRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYVKNMKPHLGFEAF 139
             S + ++   NG   S   +  AL+  S  +C  N  + D L+ A  +        E  
Sbjct: 135 ALSLMGNLMTVNG--LSPLEVLEALNN-SYGICESNHAVFDALVRACTQIGATVGACEVI 191

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           K+    G   ++ + N  L  L+K  +      VYKEM       N+++FN V++ LCK 
Sbjct: 192 KKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKD 251

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
            KL +A  +   +   G+ P VVT+N+++DG CK G +    K     + M    I PN 
Sbjct: 252 CKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNS 311

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+N+LIDGFCK   I+ A ++  EM    I   V TY ++I G    G L+EA+ L DE
Sbjct: 312 VTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDE 371

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  GL PN V  N++++    +  V+ A ++F D+S++ +     T + L    C+ G 
Sbjct: 372 MVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGY 431

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +  A    N +L+  ++ D  ++N LI  L +  N    R ++  +   G+   +VT+  
Sbjct: 432 ITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGT 491

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+   CK+G  + AV + D+M K E++   PN++ YN +I G C+ G ++ A  L++ L 
Sbjct: 492 LIDGHCKEGNIESAVQVYDKMVKGEEK---PNLLVYNSIINGLCKDGLVDVARSLVDVLQ 548

Query: 500 EKGLIPNQT 508
             GL+   T
Sbjct: 549 RMGLVDTIT 557



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 200/428 (46%), Gaps = 56/428 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-LMLAYV 127
           ++H+L    K  +  S  +  +K+G + +V T     +   D  C+     DM L L  V
Sbjct: 244 VVHALCKDCKLQEALSVFYRILKSGIWPNVVT----FNMMVDGACKMG---DMDLALKLV 296

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           + M+          AG   +K + ++ N L+    K G     E +  EM +  IE N+ 
Sbjct: 297 RKME-------IMSAG--SIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVR 347

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN---------------------- 225
           ++  ++ G  +AG L +A  + ++M   G+ P  V YN                      
Sbjct: 348 TYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDM 407

Query: 226 -------------ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
                        IL  G C+ G I    K       ++EN ++ +  + N LI+  CK 
Sbjct: 408 SDKQIPLDKFTCSILTRGLCRNGYITTALK---FLNQVLENNLIEDAFSHNILINFLCKS 464

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            N +AA ++   M   G+   VVT+ +LI+G C +G ++ AV + D+M+    KPN++  
Sbjct: 465 NNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVY 524

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N++ING CK  LV+ AR L D +   GL  + ITYNTLI+ Y   G+ + AF +   M +
Sbjct: 525 NSIINGLCKDGLVDVARSLVDVLQRMGLVDT-ITYNTLINGYFNCGKFDKAFKLSTLMQN 583

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G+L   +TYN +I  L + G V+  + +M  +V  G+    +TY  LV  + K+  +++
Sbjct: 584 AGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEE 643

Query: 453 AVSLLDEM 460
            + L D M
Sbjct: 644 VIELHDYM 651



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 17/324 (5%)

Query: 137 EAFKRAG-------------DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           E + RAG             + GL  + +  N ++  L  EG  +    V+ +M  ++I 
Sbjct: 354 EGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIP 413

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  + + +  GLC+ G +  A   +  +    +     ++NILI+  CK         A
Sbjct: 414 LDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAA---A 470

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +   M   G++P+ VTF TLIDG CK+ NI +A++V+++M        ++ YNS+ING
Sbjct: 471 RQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIING 530

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC DG +D A +L D +   GL  + +T N LING+      +KA  L   +   G+  S
Sbjct: 531 LCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILAS 589

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TYNT+I   CK G +++A  +   M+  GVLPD  TY  L+  +++  + E V  + +
Sbjct: 590 SATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHD 649

Query: 424 ELVNNGMRAGLVTYNILVGALCKD 447
            +V  G+    +TY  +V  L ++
Sbjct: 650 YMVLKGVVPDKLTYENIVSPLLQE 673



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 163/340 (47%), Gaps = 17/340 (5%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLG 135
           P +R++  M      ++    +  AL  C + + R    NS++ + +M            
Sbjct: 344 PNVRTYATMI---EGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGA 400

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSF--NFV 192
              F    D  +     +C+ L R L + G     ++++ + ++   IE   D+F  N +
Sbjct: 401 SLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIE---DAFSHNIL 457

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +N LCK+     A  ++  M   G+ P VVT+  LIDG+CK+G I     A  V+  MV+
Sbjct: 458 INFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIES---AVQVYDKMVK 514

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
               PN + +N++I+G CKD  +  A  + + +   G+    +TYN+LING    GK D+
Sbjct: 515 GEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDK 573

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L   M  +G+  +  T N +I   CK   V++A+ L   +   G+ P  ITY TL+ 
Sbjct: 574 AFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVI 633

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
              K    E+   + + M+ +GV+PD  TY  +++ L +E
Sbjct: 634 NINKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQE 673



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 135/257 (52%), Gaps = 11/257 (4%)

Query: 277 AAMKVFEEMG-SHGIA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + ++V E +  S+GI  +    +++L+      G    A  +  ++   G    +   N 
Sbjct: 149 SPLEVLEALNNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNN 208

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            ++   K   + +  +++ ++   G   +V T+N ++ A CK+ ++++A ++   +L  G
Sbjct: 209 FLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSG 268

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMN--ELVNNG-MRAGLVTYNILVGALCKDGKSK 451
           + P+V T+N ++ G  + G+++    ++   E+++ G ++   VTYN L+   CK G   
Sbjct: 269 IWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGIT 328

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A  L +EM K++ E   PN+ TY  +I+G+ + G LE+A  L +E++E+GL+PN   Y 
Sbjct: 329 VAEELRNEMMKIDIE---PNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYN 385

Query: 512 IVREEMMEKGFIPDIEG 528
            +   +  +G   D++G
Sbjct: 386 SIMHWLYMEG---DVDG 399



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 33/260 (12%)

Query: 299 SLINGLCVDGKLDEAVALRDEMMA-SGLKP----------------NVVTSNALINGFCK 341
           S+I+ L    + D+A++L   +M  +GL P                N    +AL+    +
Sbjct: 121 SVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNNSYGICESNHAVFDALVRACTQ 180

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
                 A  +   +  +G   ++  +N  +    K   +   + +   M+  G + +V+T
Sbjct: 181 IGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNT 240

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N ++  L ++  ++   ++   ++ +G+   +VT+N++V   CK G    A+ L+ +M 
Sbjct: 241 FNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKME 300

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE------ 515
            M      PN VTYN LI GFC+ G +  A  L NE+++  + PN  TY  + E      
Sbjct: 301 IMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAG 360

Query: 516 ----------EMMEKGFIPD 525
                     EM+E+G +P+
Sbjct: 361 CLEEALRLCDEMVERGLLPN 380


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 259/575 (45%), Gaps = 94/575 (16%)

Query: 1   PFCS--ANSTIED----ITELIRNHHWSKLKNTDPNTVILQLF---------NSDADPVL 45
           PF S   NS  +D    I  ++    W K  N   NT+I  L          N +  P+ 
Sbjct: 28  PFSSLSPNSLQQDLPSQIFTILLQPQWRK--NPSFNTLIPSLTPTHLSSLFNNPNLHPLT 85

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
            L +F W    +   H  + T   +HS          +  L + V+NG   +   +    
Sbjct: 86  ALNFFKW----IHYQHGFIHT---VHS---------YQPLLFILVRNGFLRAAENV---- 125

Query: 106 STCSDSLCRNSII---IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
                   RNS+I   +      +V N+  H  F             SV S N+L   L 
Sbjct: 126 --------RNSMIKSCVSSHEARFVLNLLTHHEFSL-----------SVTSYNRLFMVLS 166

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G  +++  ++K+M    +E NL SFN ++N  CK G +  A      +   G      
Sbjct: 167 RFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSF 226

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  LI GYCK   +G  YK   VF+ M + G L NEV++  LI GFC+   I  A+++F
Sbjct: 227 TYTSLILGYCKIHELGDAYK---VFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            +M   G    V TY  L+   C  GK  EA+   +EM+ +G++PNV T   LI+ FCK 
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +++   +   + E+GL  SV+ +N LID YCK G MEDA  + +SM    V P+  TY
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC----------------K 446
           N LI G  R+ +++    ++N++  N +   LVTYN L+  LC                K
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 447 DG---KSKKAVSLLD------------EMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLED 490
           DG     +   + +D            ++F+  KEK    N   Y  LI G+C+  K  D
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A+ L   +L +G  PN  T+ ++ + + ++G + D
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVED 558



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 6/377 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G      +   L+    K  +  D   V++ M +     N  S+  +++G C+ GK+++
Sbjct: 219 FGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDE 278

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A ++   MK  G  P V TY +L+  +C+   +GK  +A   F++MVENGI PN  T+  
Sbjct: 279 ALELFFQMKEDGCFPDVPTYTVLVAAFCE---VGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LID FCK   +   M++   M   G+ + VV +N+LI+G C  G +++A+ + D M  + 
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PN  T N LI GFC+KK +++A  L + + E  LSP+++TYNTLI   CK   ++ A+
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M+  G +PD  T+   I  L + G VE    +   L      A    Y  L+   
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGY 515

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK  K   A  L   M     E  +PN +T+NVL+ G  ++GK+EDA  L++ + +    
Sbjct: 516 CKAEKFSDAHLLFKRML---FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572

Query: 505 PNQTTYQIVREEMMEKG 521
           P   TY I+ EE++ + 
Sbjct: 573 PTVHTYTILIEEILRES 589



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN +    L+  + +  K     E F +  + G    V +   L+ A  + GK  +    
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           ++EM    IE N+ ++  +++  CK GK+++  +++  M   G+   VV +N LIDGYCK
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCK 377

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G    M  A  V   M  N + PN  T+N LI GFC+ +++  AM +  +M  + ++  
Sbjct: 378 RG---MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +VTYN+LI+GLC    +D A  L   M+  G  P+  T  A I+  CK   VE+A  +F+
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + E+    +   Y  LID YCK  +  DA  +   ML  G  P+  T+N L+ GL +EG
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEG 554

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            VE   ++++ +     +  + TY IL+  + ++    +A   LD+M     +   PN+V
Sbjct: 555 KVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQ---PNVV 611

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           TY   IK +C++G+L +A  ++ ++ E+G++ +   Y ++
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVL 651



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 197/431 (45%), Gaps = 55/431 (12%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G E      + GL SSV+  N L+    K G  ED   V   MK  ++  N  ++N ++ 
Sbjct: 349 GMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELIC 408

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK---------------KGG--- 236
           G C+   +++A  ++  M    +SP +VTYN LI G CK               K G   
Sbjct: 409 GFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP 468

Query: 237 --------------IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                         +GK+ +A  VF+ + E     NE  +  LIDG+CK E  S A  +F
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           + M   G     +T+N L++GL  +GK+++A++L D M     KP V T   LI    ++
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRE 588

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              ++A +  D +   G  P+V+TY   I AYC++GR+ +A  M   + + G+L D   Y
Sbjct: 589 SDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL------ 456
           + L+      G ++    ++  + + G      TY+IL+  L  +  +K+ + L      
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTN 708

Query: 457 ----------------LDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
                           +  +F KM ++   PN+ TY+ LIKG C+   L  A  L N + 
Sbjct: 709 ISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768

Query: 500 EKGLIPNQTTY 510
           E G+ P++  +
Sbjct: 769 ESGISPSENIH 779



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 182/424 (42%), Gaps = 34/424 (8%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL H ++     P  R+F   +    K GK      +F +L         N  +   L+ 
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE--ANEFLYTALID 513

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K  K       FKR    G   + ++ N LL  L KEGK ED   +   M +   + 
Sbjct: 514 GYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKP 573

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            + ++  ++  + +    ++A+  ++ M S G  P VVTY   I  YC++G   ++ +A+
Sbjct: 574 TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG---RLLEAE 630

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   + E GIL +   ++ L++ +     + +A  V   M   G      TY+ L+  L
Sbjct: 631 EMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL 690

Query: 305 CVDGKLDEAVALR--------------------------DEMMASGLKPNVVTSNALING 338
             +    E + L                           ++M+  G  PNV T + LI G
Sbjct: 691 IFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKG 750

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            CK + +  A  LF+ + E G+SPS   +N+L+ + CK G  E+A  + +SM++   L  
Sbjct: 751 LCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAH 810

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           + +Y  L+ GL  +GN E    I   L++ G     V + +L+  L + G   +   L D
Sbjct: 811 LESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRD 870

Query: 459 EMFK 462
            M K
Sbjct: 871 IMEK 874



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 23/272 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +V++    ++A  ++G+  + E +  ++K   I L+   ++ ++N     G+L+ A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 206 SDIMEDMKSLGVSPKVVTYNILI-----DGYCKKG---------------GIGKMYKADA 245
             ++  M   G  P   TY+IL+     + Y K+G                I K+   + 
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724

Query: 246 V---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           +   F+ MVE G +PN  T++ LI G CK E++S A ++F  M   GI+     +NSL++
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C  G  +EA+ L D MM      ++ +   L+ G  ++   EKA  +F  +   G + 
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
             + +  L+D   ++G +++   +R+ M   G
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 221/421 (52%), Gaps = 6/421 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F  +     +   +  +  
Sbjct: 3   HTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFS 62

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+   
Sbjct: 63  GLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 122

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 182

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 183 FRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTL 239

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +   M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 240 IDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 299

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 300 KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 359

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+++  ++    TY +++   CK G   K   LL E   M+++   P++VTYNVL+ 
Sbjct: 360 MLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHAPSVVTYNVLMN 416

Query: 481 G 481
           G
Sbjct: 417 G 417



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 116 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 175

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 176 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 235

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID  CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 236 FTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 295

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 296 MKGLKPDKFTYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 348

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L   L P+  TY ++  E  +KG
Sbjct: 349 CQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKG 387



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 55  RSDIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 114

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 115 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 171

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 172 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP 231

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 232 NGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 291

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 292 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 351

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  ++ +   P+  TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 352 GRSVDAEKMLREMLSVDLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 408

Query: 508 TTYQIV 513
            TY ++
Sbjct: 409 VTYNVL 414



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 46/251 (18%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 7   SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFATI 47

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G   DA        +  +     T   ++  L +  
Sbjct: 48  LETKGTQRSDIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 107

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 108 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRP 161

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + 
Sbjct: 162 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 221

Query: 515 EEMMEKGFIPD 525
           +EM+ KG IP+
Sbjct: 222 DEMLVKGLIPN 232


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 233/473 (49%), Gaps = 43/473 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + LH +VK G+F +   +   +    DS+  +    ++++    +  +    F   KR  
Sbjct: 265 TILHWYVKKGRFKAALCVLEDME--RDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              L     + N L+    +EGK     YV+  M R+ +  ++ ++  +++G C+  +++
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  I+ +M+  GV P  +TY+ L++GYCK   +G    A  + +D+   GI  N+    
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLG---PAIYLMEDLKSRGITINKTMRT 439

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDGFC+   IS A ++ + M   GI   V+TY++LING+C   K+ E   +   M  S
Sbjct: 440 ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS 499

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL--SPSV----------------- 364
           G+ PN V    LI  +CK   V++A   F DI  +GL  +P +                 
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559

Query: 365 ----------------ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
                           +++N +ID+YC  G +  AF++ + M+  G  P+V TY  L+ G
Sbjct: 560 EHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRG 619

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + G++   R  M+ L++        T+N L+  +C+ G   +A+ L +   KM K   
Sbjct: 620 LCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCE---KMIKNNC 676

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P+I TY +L+ GFC+KGK+  A  +L  +LEKG++P+   Y  +   ++ +G
Sbjct: 677 LPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEG 729



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 228/455 (50%), Gaps = 8/455 (1%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L+ A+ + +  S L      G F+  +     L T S     N ++ ++L+ AYVK  K 
Sbjct: 114 LIQAQMHSQAMSVLKHLAVTG-FSCTAIFTSLLRTISRFDPTNHVVFELLVKAYVKERKV 172

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                A     D G K+S +SCN +L ALV+EG+ + V    +E   R+  L + + N +
Sbjct: 173 LDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNIL 232

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           LN LC  G+  KA D+++ MKS  +S   VTYN ++  Y KK   G+   A  V +DM  
Sbjct: 233 LNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKK---GRFKAALCVLEDMER 288

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           + +  +  T+N +ID  C+ +  + A  + + M    +     TYN+LING   +GK++ 
Sbjct: 289 DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINH 348

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  + + M+   L P+V T   +I+G+C+ + ++KA  +  ++   G+ PS +TY+ L++
Sbjct: 349 ARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLN 408

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK   +  A  +   +  RG+  + +    LI G  + G +   + I+  +  +G+  
Sbjct: 409 GYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDP 468

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TY+ L+  +C+  K  +   +L    +M+K    PN V Y  LI  +C+ G +++A 
Sbjct: 469 DVITYSALINGMCRMAKMHETKEILS---RMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               ++  +GL+ N   +  +      +G I + E
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAE 560



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 210/425 (49%), Gaps = 13/425 (3%)

Query: 89  FVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           F + GK      +F+ +       S+   + +ID     Y +N +              G
Sbjct: 340 FFREGKINHARYVFNHMLRQNLVPSVATYTTMID----GYCRNRRIDKALSILSEMQITG 395

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  S L+ + LL    K        Y+ +++K R I +N      +++G C+ G+++KA 
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            I++ M   G+ P V+TY+ LI+G C+   + KM++   +   M ++GILPN+V + TLI
Sbjct: 456 QILKSMFEDGIDPDVITYSALINGMCR---MAKMHETKEILSRMQKSGILPNDVLYTTLI 512

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             +CK   +  A+K F ++   G+ A  V +N+L++    +G + EA   R  M    + 
Sbjct: 513 CYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNIS 572

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + V+ N +I+ +C +  +  A  ++DD+   G SP+V TY  L+   C+ G +  A   
Sbjct: 573 FDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQF 632

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + +LD     D  T+N L+ G+ R G ++   ++  +++ N     + TY IL+   C+
Sbjct: 633 MSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCR 692

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL-EKGLIP 505
            GK   A+ +L  M    ++   P+ V Y  L+ G   +G+++ A+ + +E++ ++GL  
Sbjct: 693 KGKILPALVILQMML---EKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYA 749

Query: 506 NQTTY 510
           +   Y
Sbjct: 750 DCIAY 754



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 189/360 (52%), Gaps = 6/360 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            GL +  ++ N L+   +K      ++ +  +M +  +  N  S+N +++G  K G+ +K+
Sbjct: 746  GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 805

Query: 206  SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              + + M   G+ P  VTY +LI G  + G I    K     + MV  GI P+ + F+ L
Sbjct: 806  LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVK---FLEKMVLEGIFPDRLVFDIL 862

Query: 266  IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
            I  F +   +  A++VF  M    ++    T++++INGL   G LD +  +  EM+  GL
Sbjct: 863  ITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGL 922

Query: 326  KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            +PN     AL+N  C+   +++A  L +++   G+ P+ +  +++I   C+ G++E+A  
Sbjct: 923  QPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVI 982

Query: 386  MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            + +SM+  G++P V+T+  L+  L +E  +    ++   +    +R  +V+YN+L+  LC
Sbjct: 983  VFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLC 1042

Query: 446  KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            KD     A+ L  EM   + +  WPNI TY  L       G++++   LL ++ E+GLIP
Sbjct: 1043 KDKHISDALDLYGEM---KSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 195/383 (50%), Gaps = 7/383 (1%)

Query: 146  GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+    ++   LL  L+ EG+ +   YV+ E+  +  +  +  ++N ++NG  K+  +N 
Sbjct: 710  GVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNT 769

Query: 205  ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
               +M DM    V P   +YNIL+ GY K+G   +  K+  ++K MV  GI P+ VT+  
Sbjct: 770  IKRMMSDMYQNEVYPNSASYNILMHGYVKRG---QFSKSLYLYKYMVRKGIRPDNVTYRL 826

Query: 265  LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            LI G  +   I  A+K  E+M   GI    + ++ LI       K+  A+ + + M    
Sbjct: 827  LILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLH 886

Query: 325  LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            + P+  T +A+ING  +K  ++ +  +  ++ + GL P+   Y  L++A C+ G ++ AF
Sbjct: 887  MSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAF 946

Query: 385  AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             ++  M   G++P     + +I GL R G +E    + + ++ +GM   + T+  L+ +L
Sbjct: 947  RLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSL 1006

Query: 445  CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            CK+ K   A+ L      ME  +   ++V+YNVLI G C+   + DA  L  E+  KGL 
Sbjct: 1007 CKESKIADALHLKR---LMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW 1063

Query: 505  PNQTTYQIVREEMMEKGFIPDIE 527
            PN TTY  +   M   G + + E
Sbjct: 1064 PNITTYITLTGAMYSTGRVQNGE 1086



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 191/380 (50%), Gaps = 12/380 (3%)

Query: 85   FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
             L+  +  G+  + S +FH +  C + L  + I  + LM  Y+K+          KR   
Sbjct: 721  LLNGLINEGQVKAASYVFHEI-ICKEGLYADCIAYNSLMNGYLKSR----NVNTIKRMMS 775

Query: 145  YGLKSSVL----SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
               ++ V     S N L+   VK G+F    Y+YK M R+ I  +  ++  ++ GL + G
Sbjct: 776  DMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECG 835

Query: 201  KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
             ++ A   +E M   G+ P  + ++ILI  + +K    KM+ A  VF  M    + P+  
Sbjct: 836  LIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS---KMHNALQVFNCMKWLHMSPSSK 892

Query: 261  TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            TF+ +I+G  +   +  + KV  EM   G+      Y +L+N  C  G++D A  L++EM
Sbjct: 893  TFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEM 952

Query: 321  MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
             A G+ P  V  +++I G C+   +E+A ++F  +   G+ P+V T+ TL+ + CKE ++
Sbjct: 953  KAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKI 1012

Query: 381  EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             DA  ++  M    +  DV +YN LI GL ++ ++    ++  E+ + G+   + TY  L
Sbjct: 1013 ADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITL 1072

Query: 441  VGALCKDGKSKKAVSLLDEM 460
             GA+   G+ +    LL+++
Sbjct: 1073 TGAMYSTGRVQNGEELLEDI 1092



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 9/274 (3%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            + ++ D+L+ A+ +  K H   + F       +  S  + + ++  L+++G  +    V 
Sbjct: 855  DRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVL 914

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             EM +  ++ N   +  ++N  C+ G++++A  + E+MK++G+ P  V  + +I G C+ 
Sbjct: 915  HEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR- 973

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               GK+ +A  VF  M+ +G++P   TF TL+   CK+  I+ A+ +   M    +   V
Sbjct: 974  --CGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDV 1031

Query: 295  VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            V+YN LI GLC D  + +A+ L  EM + GL PN+ T   L         V+    L +D
Sbjct: 1032 VSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLED 1091

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            I E+GL P+      L      E RMEDA    N
Sbjct: 1092 IEERGLIPAYKQPENL------ERRMEDAIIRLN 1119



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 168/333 (50%), Gaps = 8/333 (2%)

Query: 68   RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
            R++  +   + YP   S+   +H +VK G+F+    ++  +      +  +++   +L+L
Sbjct: 772  RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM--VRKGIRPDNVTYRLLIL 829

Query: 125  AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
               +     +  +  ++    G+    L  + L+ A  ++ K  +   V+  MK   +  
Sbjct: 830  GLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSP 889

Query: 185  NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            +  +F+ ++NGL + G L+ +  ++ +M  +G+ P    Y  L++  C+ G I + ++  
Sbjct: 890  SSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 949

Query: 245  AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
               ++M   GI+P EV  +++I G C+   +  A+ VF  M   G+   V T+ +L++ L
Sbjct: 950  ---EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSL 1006

Query: 305  CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            C + K+ +A+ L+  M    L+ +VV+ N LI G CK K +  A  L+ ++  +GL P++
Sbjct: 1007 CKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNI 1066

Query: 365  ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             TY TL  A    GR+++   +   + +RG++P
Sbjct: 1067 TTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 246/493 (49%), Gaps = 52/493 (10%)

Query: 68  RLLHSLVVAKKYP----KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
           +L   + V  K P       +FL    K+GK   +   F A  T  +SL  +  + DML+
Sbjct: 290 KLFLEMAVESKAPLNNVAWTAFLSGLCKSGK---IEQAFEACRTMQESLSSSQPVYDMLI 346

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
              +++ +     EA        ++ S  +C+ +++ L K G+ +    + + M +R   
Sbjct: 347 RLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMK------------------------------ 213
            ++ + + ++N LCKA K+ +A + ++ M                               
Sbjct: 407 PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466

Query: 214 ---SLGVS-----PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              S  VS     P VV+Y+ILIDG+CK   I ++ +A+ ++K M++   +PN  T+N  
Sbjct: 467 AIFSTMVSERSFVPDVVSYSILIDGFCK---IDELGRAEKLYKQMIDLNCVPNVTTYNAF 523

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++G  +   I+ A  V+EEM + G +  V+TY++LI+G  +  K D+A  L + M++ G 
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC 583

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PN VT N L++G CK+   ++A  LF  + E+G  P  +TY TL+  +C  G++E A  
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+ +G  PDV  YNCL+ G  R G     + +   +V+   +   V++NI++  L 
Sbjct: 644 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLS 703

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K  +   AV + +   +ME++    P++VTYN LI G C + +L +A  +  E+    L 
Sbjct: 704 KAKRLDDAVEVFE---RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 760

Query: 505 PNQTTYQIVREEM 517
           P+   + ++ E +
Sbjct: 761 PDPHAFNVLLEAI 773



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 221/454 (48%), Gaps = 26/454 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLA 125
           GR L   V  +   K ++ L  FV   K    S +F A+     S C+ ++ I   ++LA
Sbjct: 223 GRDLEKRVAVEMMLK-KALLVNFVIQDKAIEASKLFRAMVK---SGCKPDATIYSYMVLA 278

Query: 126 YVK--NMKPHLGFEAFKRAGDYGLKSSV----LSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           + K  N+      EAFK   +  ++S      ++    L  L K GK E      + M+ 
Sbjct: 279 HCKLENLD-----EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE 333

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             +  +   ++ ++  L ++G+++KA +   ++    + P   T + +I   CK G   +
Sbjct: 334 S-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG---R 389

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH--GIAAGVVTY 297
           +  A ++ + M++ G  P+  T + LI+  CK + I  A +  + M       ++   +Y
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449

Query: 298 NSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           NSL+N LC   K+ +A A+   M++     P+VV+ + LI+GFCK   + +A  L+  + 
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           +    P+V TYN  ++   ++GR+ DA  +   M+  G  PDV TY+ LI G S     +
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +   +++ G R   VTYN L+  LCK+ K  +A  L  +M +   +   P+ VTY 
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD---PDRVTYT 626

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            L+ GFC  GK+E A  + +E++ KG  P+   Y
Sbjct: 627 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 660



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 152/294 (51%), Gaps = 8/294 (2%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTY 297
           K  +A  +F+ MV++G  P+   ++ ++   CK EN+  A K+F EM     A    V +
Sbjct: 249 KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW 308

Query: 298 NSLINGLCVDGKLDEAV-ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
            + ++GLC  GK+++A  A R   M   L  +    + LI    +   ++KA     +I+
Sbjct: 309 TAFLSGLCKSGKIEQAFEACR--TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            + + PS  T +++I   CK GR++ A ++  +M+ RG  PD++T++ LI  L +   ++
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426

Query: 417 GVRNIMNELVNN--GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
             +  +  +        +   +YN L+ +LCK  K  +A ++   M  + +    P++V+
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTM--VSERSFVPDVVS 484

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           Y++LI GFC+  +L  A  L  ++++   +PN TTY      +M KG I D +G
Sbjct: 485 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 11/274 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +FL+  ++ G+      ++  +  + CS  +   S +I    LA  K+ + H   E F+ 
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLAR-KHDQAH---ELFET 577

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G + + ++ N LL  L KE K ++   ++++M  R  + +  ++  +L G C  GK
Sbjct: 578 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGK 637

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           + +A ++ ++M S G  P VV YN L+ G+ + G  G   +A  +F+ MV     P+ V+
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG---EAKQLFQVMVSRQCKPDTVS 694

Query: 262 FNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            N +IDG  K + +  A++VFE M   HG +  +VTYNSLI GLC + +L EA+ +  E+
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
               L P+    N L+    K  +V +  + F D
Sbjct: 755 DRLKLSPDPHAFNVLLEAI-KCGIVYQFEIRFKD 787



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 19/266 (7%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A+  F  + +      V TYN L++ L     L +A  + ++M+A G+ PN  T   L+ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID---AYCKEGRMEDAFAMRNSMLDRG 394
             C ++  ++A   F ++ ++G  PS   Y  + +   A  KEG     F      L++ 
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD---LEKR 229

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  ++     L+     +        +   +V +G +     Y+ +V A CK       +
Sbjct: 230 VAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCK-------L 282

Query: 455 SLLDEMFK----MEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             LDE FK    M  E K P N V +   + G C+ GK+E A      + E  L  +Q  
Sbjct: 283 ENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPV 341

Query: 510 YQIVREEMMEKGFIPDIEGHMYNISG 535
           Y ++   ++E G I   E     I+G
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAG 367


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 214/408 (52%), Gaps = 22/408 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F +    G +  V++   L+  L K G       + + M ++    N+ ++N +++
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 298

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK  ++ +A ++  +M + G+SP + TYN LI   C    + +      +  +MV + 
Sbjct: 299 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCN---LCEWKHVTTLLNEMVNSK 355

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+PN V F+T++D  CK+  I+ A  V + M   G+   VVTY +L++G C+  ++DEAV
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + D M+  G  PNV + N LING+C+ + ++KA  L + +S QGL    +TYNTLI   
Sbjct: 416 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C  GR++ A A+ + M+  G +PD+ TY  L+  L +  ++     ++  +  + + A +
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 535

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           + YNI +  +C+ G+ + A  L      +  +   P++ TYN++I G C++G L++AN L
Sbjct: 536 LVYNIAIDGMCRAGELEAARDLFS---NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 592

Query: 495 LNELLEKGLIPNQTTYQ-IVR---------------EEMMEKGFIPDI 526
             ++ E G   +   Y  I+R               +EM+ +GF  D+
Sbjct: 593 FRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADV 640



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 229/463 (49%), Gaps = 19/463 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH        P    F  +     K    ST+  +LST  DS     I  D+  L  +
Sbjct: 140 RMLH----MHPPPSTVDFTKLLTSIAKMKHYSTVL-SLSTQMDSF---GIPPDVYTLNIL 191

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL      F    +    G +    + N L+R L  EGK  +  +++ +      
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 251

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + ++ ++  ++NGLCK G  + A  ++  M      P V+ YN +ID  CK   + + + 
Sbjct: 252 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +F +M+  GI P+  T+N+LI   C          +  EM +  I   VV ++++++
Sbjct: 312 ---LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +G +  A  + D M+  G++P+VVT  AL++G C +  +++A  +FD +  +G  P
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V +YN LI+ YC+  RM+ A  +   M  +G++ D  TYN LI GL   G ++    + 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+V +G    LVTY IL+  LCK+    +A+ LL     +E      +I+ YN+ I G 
Sbjct: 489 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK---AIEGSNLDADILVYNIAIDGM 545

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           C+ G+LE A  L + L  KGL P+  TY I+   + ++G + +
Sbjct: 546 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 588



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 197/387 (50%), Gaps = 11/387 (2%)

Query: 132 PHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           PH         +F R        S +   +LL ++ K   +  V  +  +M    I  ++
Sbjct: 126 PHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 185

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            + N ++N  C   +L  A  ++  +  LG  P   T+N LI G C +G IG+   A  +
Sbjct: 186 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE---ALHL 242

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F   +  G  P+ VT+ TL++G CK  N SAA+++   M        V+ YN++I+ LC 
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D ++ EA  L  EM+  G+ P++ T N+LI+  C     +    L +++    + P+V+ 
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           ++T++DA CKEG +  A  + + M+ RGV PDV TY  L+ G      ++    + + +V
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G    + +YNIL+   C+  +  KA+ LL++M     +    + VTYN LI G C  G
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM---SLQGLIADTVTYNTLIHGLCHVG 479

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L+ A  L +E++  G IP+  TY+I+
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRIL 506



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 200/396 (50%), Gaps = 23/396 (5%)

Query: 67  GRLLHSLV-VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           G L++ L  V      IR    M  KN +   +     A +T  DSLC++  + +     
Sbjct: 259 GTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI-----AYNTIIDSLCKDRQVTE----- 308

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
                     F  F      G+   + + N L+ AL    +++ V  +  EM   +I  N
Sbjct: 309 ---------AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           +  F+ V++ LCK G +  A D+++ M   GV P VVTY  L+DG+C +    +M +A  
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS---EMDEAVK 416

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           VF  MV  G +PN  ++N LI+G+C+ + +  AM + E+M   G+ A  VTYN+LI+GLC
Sbjct: 417 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 476

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G+L  A+AL  EM+ASG  P++VT   L++  CK   + +A VL   I    L   ++
Sbjct: 477 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 536

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YN  ID  C+ G +E A  + +++  +G+ PDV TYN +I GL + G ++    +  ++
Sbjct: 537 VYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
             NG       YN ++    +  ++  A  LL EM 
Sbjct: 597 DENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEML 632



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 19/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A + F  M+     P+ V F  L+    K ++ S  + +  +M S GI   V T N LIN
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 193

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C   +L  A ++  +++  G +P+  T N LI G C +  + +A  LFD    +G  P
Sbjct: 194 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 253

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V+TY TL++  CK G    A  +  SM+ +   P+V  YN +I  L ++  V    N+ 
Sbjct: 254 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E++  G+   + TYN L+ ALC   + K   +LL+EM      K  PN+V ++ ++   
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV---NSKIMPNVVVFSTVVDAL 370

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY------QIVREEMME----------KGFIPDI 526
           C++G +  A+ +++ ++++G+ P+  TY        +R EM E          KG +P++
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 527 EGHMYNISG 535
             +   I+G
Sbjct: 431 RSYNILING 439



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 13/262 (4%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FNTL D          A+  F  M         V +  L+  +         ++L  +M 
Sbjct: 128 FNTLDD----------ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 177

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G+ P+V T N LIN FC  + +  A  +   + + G  P   T+NTLI   C EG++ 
Sbjct: 178 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG 237

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + +  +  G  PDV TY  L+ GL + GN      ++  +V    R  ++ YN ++
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +LCKD +  +A +L  EM     +   P+I TYN LI   C   + +    LLNE++  
Sbjct: 298 DSLCKDRQVTEAFNLFSEMI---TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354

Query: 502 GLIPNQTTYQIVREEMMEKGFI 523
            ++PN   +  V + + ++G I
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMI 376


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 200/375 (53%), Gaps = 14/375 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           +L     +G   ++  +   M    I  N   FN   +   K G ++KA DI   M+  G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  V+Y  LID  CK   +G++  A+  F  M+  G+ PN V F++L+ G C  +   
Sbjct: 61  LSPDAVSYGALIDALCK---LGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWE 117

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++F EM + GI   +V +N+++  LC +G++ E   L D +   G++P+V++ N LI
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 177

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G C    +++A  L + +   GL P+  +YNTL+  YCK GR++ A+++   ML  G+ 
Sbjct: 178 DGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V TYN ++ GL +       + +   ++N+G + G+ TYN ++  LCK        + 
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKS-------NC 290

Query: 457 LDEMFKMEK----EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           +DE FKM +    +    NI+T+ ++I    + G+ EDA  L   +   GL+P+  TY++
Sbjct: 291 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRV 350

Query: 513 VREEMMEKGFIPDIE 527
           V E ++E+G + + +
Sbjct: 351 VAENLIEEGSLEEFD 365



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N    A  K G  +    ++ +M++  +  +  S+  +++ LCK G+++ A      M +
Sbjct: 34  NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 93

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P +V ++ L+ G C    I K  K + +F +M+  GI PN V FNT++   CK+  
Sbjct: 94  EGVTPNIVVFSSLVYGLCS---IDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 150

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +    ++ + +   G+   V++YN+LI+G C+ G +DEA  L + M++ GLKPN  + N 
Sbjct: 151 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNT 210

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G+CK   ++ A  LF  +   G++P V+TYNT++    +  R  +A  +  +M++ G
Sbjct: 211 LLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 270

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TYN ++ GL +   V+    +   L + G++  ++T+ I++GAL K G+ + A+
Sbjct: 271 TKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 330

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L      +      P++VTY V+ +   ++G LE+ + L + + + G  PN      + 
Sbjct: 331 DLFA---AIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 387

Query: 515 EEMMEKGFI 523
             ++ +G I
Sbjct: 388 RRLLHRGDI 396



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 177/322 (54%), Gaps = 3/322 (0%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + G+  +++  + L+  L    K+E VE ++ EM    I  N+  FN +L  LCK
Sbjct: 88  FNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 147

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +   +++ ++ +GV P V++YN LIDG+C  G I +   A  + + MV  G+ PN
Sbjct: 148 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE---ASKLLEGMVSVGLKPN 204

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             ++NTL+ G+CK   I +A  +F +M S+GI  GVVTYN++++GL    +  EA  L  
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 264

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG K  + T N ++NG CK   V++A  +F  +  +GL  ++IT+  +I A  K G
Sbjct: 265 NMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 324

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R EDA  +  ++   G++PDV TY  +   L  EG++E   ++ + +  NG        N
Sbjct: 325 RKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 384

Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
            LV  L   G   +A + L ++
Sbjct: 385 ALVRRLLHRGDISRAGAYLSKL 406



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 215/428 (50%), Gaps = 8/428 (1%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           LH +   G  + +  + + +   ++ +  N  I ++   AY K        + F +   +
Sbjct: 2   LHGYGNKGALSEMHDLLNLM--VANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 59

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL    +S   L+ AL K G+ +D E  + +M    +  N+  F+ ++ GLC   K  K 
Sbjct: 60  GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKV 119

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M ++G+ P +V +N ++   CK+G   ++ +   +   +   G+ P+ +++NTL
Sbjct: 120 EELFFEMLNVGIHPNIVFFNTILCNLCKEG---RVMEGQRLVDSIECMGVRPDVISYNTL 176

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG C    I  A K+ E M S G+     +YN+L++G C  G++D A +L  +M+++G+
Sbjct: 177 IDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGI 236

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P VVT N +++G  + K   +A+ L+ ++   G    + TYNT+++  CK   +++AF 
Sbjct: 237 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFK 296

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           M  S+  +G+  ++ T+  +I  L + G  E   ++   +  NG+   +VTY ++   L 
Sbjct: 297 MFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLI 356

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++G  ++  SL      MEK    PN    N L++    +G +  A   L++L E+    
Sbjct: 357 EEGSLEEFDSLFS---AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV 413

Query: 506 NQTTYQIV 513
             +T  ++
Sbjct: 414 EASTTSML 421



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 165/320 (51%), Gaps = 3/320 (0%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F    + G+  +++  N +L  L KEG+  + + +   ++   +  ++ S+N +++G 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C AG +++AS ++E M S+G+ P   +YN L+ GYCK G I   Y   ++F+ M+ NGI 
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAY---SLFRKMLSNGIT 237

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P  VT+NT++ G  + +  S A +++  M + G   G+ TYN+++NGLC    +DEA  +
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKM 297

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              + + GL+ N++T   +I    K    E A  LF  I   GL P V+TY  + +   +
Sbjct: 298 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIE 357

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG +E+  ++ ++M   G  P+    N L+  L   G++      +++L          T
Sbjct: 358 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 417

Query: 437 YNILVGALCKDGKSKKAVSL 456
            ++L+     D     A SL
Sbjct: 418 TSMLISIFSSDEYQHHAKSL 437


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 194/388 (50%), Gaps = 36/388 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  L++   F+   +++  +K + + LN  SF  ++ G C+AG   +   ++  ++ 
Sbjct: 128 NNLLCLLIRSNYFDKAWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEE 186

Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
            G+SP VV Y  LIDG CK G +                                G   +
Sbjct: 187 FGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQRE 246

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              ++++M  +GI+PN   +N LI  +C D  +  A KVF EM   GIA GV+TYN LI 
Sbjct: 247 GFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   K  EAV L  ++   GL PN+VT N LINGFC    ++ A  LF+ +   GLSP
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +++TYNTLI  Y K   +  A  +   M +R +     TY  LI   +R    +    + 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMH 426

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +  +G+   + TY++L+   C +G  K+A      + +M  +   PN V YN +I G+
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQ---PNSVIYNTMIHGY 483

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY 510
           C++G    A  LLNE++  G++PN  ++
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASF 511



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 196/372 (52%), Gaps = 6/372 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++GL  +V+    L+    K G     + ++ +M R  +  N  +++ ++NG  K G   
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQR 245

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   + E+M   G+ P    YN LI  YC  G + K +K   VF +M E GI    +T+N
Sbjct: 246 EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFK---VFAEMREKGIACGVMTYN 302

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G C+ +    A+K+  ++   G++  +VTYN LING C  GK+D AV L +++ +S
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL P +VT N LI G+ K + +  A  L  ++ E+ ++ S +TY  LIDA+ +    + A
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKA 422

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M + M   G++PDV TY+ LI G    GN++        L    ++   V YN ++  
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHG 482

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK+G S +A+ LL+EM         PN+ ++   +   C+  K ++A  LL +++  GL
Sbjct: 483 YCKEGSSYRALRLLNEMV---HSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGL 539

Query: 504 IPNQTTYQIVRE 515
            P+ + Y++V +
Sbjct: 540 KPSVSLYKMVHK 551



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 174/329 (52%), Gaps = 3/329 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N     +LM  + K      GF+ ++     G+  +  + N L+     +G  +   
Sbjct: 224 LVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAF 283

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V+ EM+ + I   + ++N ++ GLC+  K  +A  ++  +  +G+SP +VTYNILI+G+
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C    +GKM  A  +F  +  +G+ P  VT+NTLI G+ K EN++ A+ + +EM    IA
Sbjct: 344 CD---VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+        D+A  +   M  SGL P+V T + LI+G C    +++A   
Sbjct: 401 RSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKP 460

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E  L P+ + YNT+I  YCKEG    A  + N M+  G++P+V+++   +  L R
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR 520

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +   +    ++ +++N+G++  +  Y ++
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 178/349 (51%), Gaps = 3/349 (0%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +I   L+    KN    L    F +    GL  +  + + L+    K+G   +  
Sbjct: 189 LSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGF 248

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +Y+ M R  I  N  ++N +++  C  G ++KA  +  +M+  G++  V+TYNILI G 
Sbjct: 249 QMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+    G+  K   +   + + G+ PN VT+N LI+GFC    +  A+++F ++ S G++
Sbjct: 309 CRGKKFGEAVK---LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTYN+LI G      L  A+ L  EM    +  + VT   LI+ F +    +KA  +
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + + GL P V TY+ LI   C  G M++A     S+ +  + P+   YN +I G  +
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           EG+      ++NE+V++GM   + ++   +G LC+D K K+A  LL +M
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQM 534



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 195/429 (45%), Gaps = 39/429 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE----LNLDSFNF--- 191
           F  A   GL  +  S + +L  L+  G     + +   +   RI     L L   +F   
Sbjct: 26  FNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTSC 85

Query: 192 ---------VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
                    ++N    +   ++A   +  M   G +P   T+N L+   C         K
Sbjct: 86  STYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLL---CLLIRSNYFDK 142

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +F +++++ ++ N  +F  +I G C+        ++   +   G++  VV Y +LI+
Sbjct: 143 AWWIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLID 201

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C +G +  A  L  +M   GL PN  T + L+NGF K+ L  +   ++++++  G+ P
Sbjct: 202 GCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVP 261

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +   YN LI  YC +G ++ AF +   M ++G+   V TYN LI GL R         ++
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +++   G+   +VTYNIL+   C  GK   AV L ++   ++     P +VTYN LI G+
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ---LKSSGLSPTLVTYNTLIAGY 378

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV---------------REEMMEK-GFIPDI 526
            +   L  A  L+ E+ E+ +  ++ TY I+                  +MEK G +PD+
Sbjct: 379 SKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDV 438

Query: 527 EGHMYNISG 535
             +   I G
Sbjct: 439 YTYSVLIHG 447


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 243/485 (50%), Gaps = 30/485 (6%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
           DP +   +F W+  +    H+      LL++ V AK++ +    L   ++   F      
Sbjct: 55  DPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFP----- 109

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
                        N I+   ++  + K  +    FE      + G+K  VL  + L++ L
Sbjct: 110 -------------NEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGL 156

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK-----SLG 216
            ++G+ ++    +K M       N+ ++N V+NGLCKA ++++A ++ +DM+     S G
Sbjct: 157 CRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHG 215

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V++Y+ +ID  CK   + K Y+    FK M   G  PN VT+++LIDG CK +  S
Sbjct: 216 CEPDVISYSTVIDALCKAQRVDKAYE---YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPS 272

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
             +++   M   G    ++ +N++++ L  + + ++A    + ++ SG KPNVVT N  +
Sbjct: 273 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 332

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   V++A  +  ++ E  ++P VITY+++ID +CK GRM+ A  +   M+    +
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P   T+  L+ G S          +  ++VN G   GL TYN+L+  +C     + A+ +
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                KM+++K+ P+  TY  LI+  C+  ++++A   L+ +    ++PN      + E 
Sbjct: 453 Y---HKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 509

Query: 517 MMEKG 521
           + ++G
Sbjct: 510 LCKQG 514



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 191/363 (52%), Gaps = 30/363 (8%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +LN   KA +  +A  ++++       P  + Y  +I+G+CK G + + ++   +  +M 
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFE---LLDEMK 138

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           E G+  + +  +TLI G C+   I  A++ F+ MG    +  V+TYN+++NGLC   ++D
Sbjct: 139 ERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRID 197

Query: 312 EAVALRDEM-----MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           EA+ L D+M      + G +P+V++ + +I+  CK + V+KA   F  +   G +P+V+T
Sbjct: 198 EALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVT 257

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y++LID  CK  R  +   +   M ++G   ++  +N ++  L +    E        L+
Sbjct: 258 YSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 317

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G +  +VTYN+ V  LCK G+  +A  +L EM +    K  P+++TY+ +I GFC+ G
Sbjct: 318 KSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE---SKVTPDVITYSSIIDGFCKAG 374

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHM 530
           +++ A+ +   ++    IP+  T+                  V E+M+  GFIP ++   
Sbjct: 375 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ--T 432

Query: 531 YNI 533
           YN+
Sbjct: 433 YNV 435



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 74/420 (17%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C+ ++   S +ID L     K  +P    E      + G   +++  N +L AL K  + 
Sbjct: 251 CAPNVVTYSSLIDGL----CKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E     ++ + +   + N+ ++N  ++GLCKAG++++A  I+ +M    V+P V+TY+ +
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           IDG+CK G   +M KAD VF  M+ +  +P+ VTF TL+ GF + +    A +V E+M +
Sbjct: 367 IDGFCKAG---RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 288 HGIAAGVVTYN-----------------------------------SLINGLCVDGKLDE 312
            G   G+ TYN                                    LI  LC   ++DE
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE 483

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP---------- 362
           A    D M A  + PN    +AL+   CK+  V++A  + D++ E G  P          
Sbjct: 484 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543

Query: 363 ----------------------SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
                                    TY+  +   CK G+ ++A  +   M+ +GV PD  
Sbjct: 544 ELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEG 603

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  ++  L     VE       ++ + G   GLVTY +L+G  C    + +A  + + M
Sbjct: 604 TYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 165/364 (45%), Gaps = 17/364 (4%)

Query: 59  ASHSLLLTGR------LLHSLVVAKKYPKI---RSFLHMFVKNGKFTSVSTIFHALSTCS 109
           A H L   GR      +L  +V +K  P +    S +  F K G+      +F  +    
Sbjct: 331 AVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV-- 388

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
                + +    L+  + ++ K    F   +   + G    + + N L+  +      E 
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +Y +MKR++ + + +++  ++  LC+A ++++A + ++ M++  V P     + L++
Sbjct: 449 ALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 508

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK+G + +   A +V  ++VE G  P   TF  L++     +   AA K+     S G
Sbjct: 509 VLCKQGEVDE---ACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR---SPG 562

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
             A   TY+  +  +C  GK DEAV + ++M+  G++P+  T  A++   C    VE A 
Sbjct: 563 FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAI 622

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             F+ ++ +G +P ++TY  LI   C     ++AF +  +M+  G  P   T   L + L
Sbjct: 623 AEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682

Query: 410 SREG 413
              G
Sbjct: 683 RDAG 686



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +++  +  +CKAGK ++A +++E M   GV P   TY  ++   C   G+ ++  A A F
Sbjct: 569 TYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLC---GLDRVESAIAEF 625

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + M   G  P  VT+  LI   C  +    A ++FE M + G      T  +L + L   
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDA 685

Query: 308 GKLDEAVALRDEMMA 322
           G  D  V  R   MA
Sbjct: 686 GYQDLLVRQRIMTMA 700


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 216/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 8   MIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITAYLE 67

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 68  SGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 127

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + ++  +   
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA-- 185

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+     A ++F+EM   G+    V + +LI+G C +G
Sbjct: 186 -MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNG 244

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL P  ITY 
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYT 304

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF     M+      D   Y  LI+GL  EG       ++ E+++ 
Sbjct: 305 TLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSV 364

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G   K   LL E   M+++   P++VTYNVL+ G
Sbjct: 365 GLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVTYNVLMNG 414



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+     +  +  D+   VL  L K         
Sbjct: 52  RSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDI---RJAQSVFDAITKWGLRPSVVSYNTLMN 168

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LING C + K D+A  L DEM+  GL P
Sbjct: 169 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVP 228

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V    LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 229 NXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++    R   V Y  L+  LC +
Sbjct: 289 DEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXE 348

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 349 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 405

Query: 508 TTYQIV 513
            TY ++
Sbjct: 406 VTYNVL 411



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 172

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+   + A  LFD++  +GL P+ + 
Sbjct: 173 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 232

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 292

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G    A    +   +M +E    + V Y  LI G C +G
Sbjct: 293 XKGLKPDKITYTTLIDGCCKEGDLDSA---FEHXKRMIQENXRLDEVXYTALISGLCXEG 349

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 350 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384


>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 846

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 252/498 (50%), Gaps = 16/498 (3%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVK--NG 93
           L  + +D    L +F W   +LR + SL     ++H L   + + +    L   ++  N 
Sbjct: 111 LIRTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNV 170

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
              S   ++  L  C++    N +I DML+ AYVK      G E F +  +     +V++
Sbjct: 171 NVVSYDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVA 230

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           CN LL  L K     +   VY+EM R  I  N  +FN + + LC+ G  +K +  +E M+
Sbjct: 231 CNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKME 290

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G  P +VTYNILI+GYCKK    ++  A  ++K M   G++PN ++++ L++G CK+ 
Sbjct: 291 EEGFEPDLVTYNILINGYCKK---RRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEG 347

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-GKLDEAVALRDEMMASGLKPNVVTS 332
            I  A ++F +M   GI   VV+YN+LI+G C + GK+    +L  EM+  G++P+ VT 
Sbjct: 348 KIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTC 407

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML- 391
             +  G+ ++  +  A  +  ++   G+      Y+ L+ A CKEGR    FA R+ ++ 
Sbjct: 408 RIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGR---PFAARSFLIR 464

Query: 392 ---DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
              D   +P++STY  L   L    NVE    + +E+    M+  L TY  ++  LC+  
Sbjct: 465 ISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVK 524

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           ++ +A +LL+EM  +      P++     LI G+C++  ++ A  LL    ++  + +  
Sbjct: 525 RTSEAENLLEEMVSL---GILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTE 581

Query: 509 TYQIVREEMMEKGFIPDI 526
           +Y  + +   E G + ++
Sbjct: 582 SYNAIVKVFCEVGNVAEL 599



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 183/357 (51%), Gaps = 24/357 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ ++    K G + K  +           P VV  N L++G  K   IG+ ++   V++
Sbjct: 196 FDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWE---VYE 252

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   GI  N  TFN +    C++ +        E+M   G    +VTYN LING C   
Sbjct: 253 EMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKR 312

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L++A  L   M   G+ PN+++ +AL+NG CK+  +++A  LF+ + ++G+ P V++YN
Sbjct: 313 RLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYN 372

Query: 369 TLIDAYCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           TLI  YCKEG +M+   ++ + M+  G+ PD  T   +  G +REG +    N++ EL  
Sbjct: 373 TLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQR 432

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKG 486
            G++     Y+ L+ ALCK+G+   A S L    ++ ++  + P + TY  L +  C   
Sbjct: 433 FGIKIPENLYDYLLVALCKEGRPFAARSFL---IRISQDGDYVPEMSTYIKLAESLCSFN 489

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIE 527
            +E+A  L +E+ +K +  N TTY+ +                 EEM+  G +PD+E
Sbjct: 490 NVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLE 546



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 158/337 (46%), Gaps = 38/337 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++ N L+    K+ + ED  Y+YK M  R +  NL S++ ++NGLCK GK+ +A
Sbjct: 293 GFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEA 352

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VV+YN LI GYCK+GG  KM    ++  +M+  GI P+ VT   +
Sbjct: 353 HQLFNQMVQRGIDPDVVSYNTLISGYCKEGG--KMQMCRSLLHEMIGIGIRPDNVTCRIV 410

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK---------------- 309
             G+ ++  + +A+ +  E+   GI      Y+ L+  LC +G+                
Sbjct: 411 FQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGD 470

Query: 310 --------------------LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                               ++EA+ L+ EM    +K N+ T  A+I+  C+ K   +A 
Sbjct: 471 YVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAE 530

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L +++   G+ P +     LI+ YC+E  ++ A ++         + D  +YN ++   
Sbjct: 531 NLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVF 590

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              GNV  +  + ++LV  G     +T   ++  L K
Sbjct: 591 CEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQK 627



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 158/329 (48%), Gaps = 34/329 (10%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  ++L+  Y K  +    F  +K  G  G+  +++S + L+  L KEGK ++   ++ +
Sbjct: 299 VTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQ 358

Query: 177 MKRRRIELNLDSFNFVLNGLCK-AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           M +R I+ ++ S+N +++G CK  GK+     ++ +M  +G+ P  VT  I+  GY ++G
Sbjct: 359 MVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREG 418

Query: 236 GI--------------------------------GKMYKADAVFKDMVENG-ILPNEVTF 262
            +                                G+ + A +    + ++G  +P   T+
Sbjct: 419 KLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTY 478

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L +  C   N+  A+ +  EM    +   + TY ++I+ LC   +  EA  L +EM++
Sbjct: 479 IKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVS 538

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P++    ALING+C++  V+KA  L    +++       +YN ++  +C+ G + +
Sbjct: 539 LGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAE 598

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              +++ ++  G +P+  T   +I GL +
Sbjct: 599 LMELQDKLVKIGYVPNSLTCKYVIRGLQK 627


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 41/436 (9%)

Query: 139 FKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            +R G D     +  S N ++  + + G+  D   V+ EM  R +  N  ++N +++G  
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K G L     + + M   G+ P  +TYN+L+ G C+ G   +M +  A+  +M    ++P
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG---RMGETSALLDEMASQKMVP 299

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T++ L DG  ++ +  A + +F +   +G+  G  T + L+NGLC DGK+  A  + 
Sbjct: 300 DGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 359

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++ +GL P  V  N LING+C+   +E A   F  +  + + P  ITYN LI+  CK 
Sbjct: 360 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 419

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ +A  +   M D GV P V T+N LI    R G +E    +++E+  NG++  +V+Y
Sbjct: 420 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 479

Query: 438 NILVGALCKDGKSKKAVSLLDEMF--------------------------------KMEK 465
             +V A CK+GK  +AV++LD+MF                                KM+ 
Sbjct: 480 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 539

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP- 524
               P+IVTYN+LIKG C + ++ +A  ++N L    LIP+  +Y  +      +G I  
Sbjct: 540 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 599

Query: 525 --DIEG--HMYNISGT 536
             D++   H Y I  T
Sbjct: 600 ALDLQQRMHKYGIKST 615



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 41/442 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  ++K      GF    +   +GLK + ++ N LL  L + G+  +   + 
Sbjct: 230 NHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 289

Query: 175 KEMKRRR--------------IELNLDS---------------------FNFVLNGLCKA 199
            EM  ++              +  N DS                      + +LNGLCK 
Sbjct: 290 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKD 349

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK++ A ++++ + + G+ P  V YN LI+GYC+ G   ++  A + F  M    I P+ 
Sbjct: 350 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELEGAFSTFGQMKSRHIKPDH 406

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+N LI+G CK E I+ A  +  EM  +G+   V T+N+LI+     G+L++   +  E
Sbjct: 407 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GLKPNVV+  +++N FCK   + +A  + DD+  + + P+   YN +IDAY + G 
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            + AF +   M   G+ P + TYN LI GL  +  +     I+N L N+ +    V+YN 
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 586

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ A C  G   KA   LD   +M K      + TY+ LI G    G+L +   L  +++
Sbjct: 587 LISACCYRGNIDKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643

Query: 500 EKGLIPNQTTYQIVREEMMEKG 521
           +  ++P+   + I+ E   + G
Sbjct: 644 QNNVVPSNAIHNIMVEAYSKYG 665



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+    K+ K  +  E  +   + GL  + +  N L+    + G+ E     + +MK R
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            I+ +  ++N ++NGLCKA ++  A D++ +M+  GV+P V T+N LID Y   G  G++
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAY---GRTGQL 457

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            K   V  +M ENG+ PN V++ ++++ FCK+  I  A+ + ++M    +      YN++
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+     G  D+A  L ++M ++G+ P++VT N LI G C +  + +A  + + +S   L
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 577

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ++YNTLI A C  G ++ A  ++  M   G+   V TY+ LI+GL   G +  +  
Sbjct: 578 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEY 637

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           +  +++ N +      +NI+V A  K G   KA  L  EM +
Sbjct: 638 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 27/334 (8%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP-NEVTFNTLIDGFC 270
           + S G  P    +N  +      G +G+   A  + + M  +G  P N  ++N +I G  
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGE---AVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +      A++VF+EM    +    +TYN++I+G    G L+   +LRD+M+  GLKPN +
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAI 267

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L++G C+   + +   L D+++ Q + P   TY+ L D   + G  +   ++    
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 391 LDRGVLPDVSTYNC--LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           L  GV   +  Y C  L+ GL ++G V     ++  LVN G+    V YN L+   C+ G
Sbjct: 328 LKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 385

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           + + A S   +   M+     P+ +TYN LI G C+  ++ +A  LL E+ + G+ P   
Sbjct: 386 ELEGAFSTFGQ---MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 442

Query: 509 TYQ----------------IVREEMMEKGFIPDI 526
           T+                 IV  EM E G  P++
Sbjct: 443 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G+  +V + N L+ A  + G+ E    V  EM+   ++ N+ S+  ++N  CK GK+ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  I++DM    V P    YN +ID Y + G   + +    + + M  NGI P+ VT+N
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF---ILVEKMKSNGISPSIVTYN 550

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G C    IS A ++   + +H +    V+YN+LI+  C  G +D+A+ L+  M   
Sbjct: 551 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 610

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+K  V T + LI+G      + +   L+  + +  + PS   +N +++AY K G    A
Sbjct: 611 GIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 670

Query: 384 FAMRNSMLDR 393
             +R  ML +
Sbjct: 671 EDLRKEMLQK 680



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 41/217 (18%)

Query: 343 KLVEKARVLFDDISEQGLSP--SVITYNTLIDAYCKEGRMED---AFA------------ 385
           +L + A  L  D++++  +P  S+ + N L++A    GR  D   AF             
Sbjct: 102 RLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTF 161

Query: 386 ---------------------MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
                                +R    D    P+  +YN +IAG+ R G       + +E
Sbjct: 162 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 221

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +    +TYN ++    K G  +   SL D+M     +   PN +TYNVL+ G C+
Sbjct: 222 MTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLK---PNAITYNVLLSGLCR 278

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G++ + + LL+E+  + ++P+  TY I+ + +   G
Sbjct: 279 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 315


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 241/483 (49%), Gaps = 38/483 (7%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           +H +  +G++   + +F  ++  S  L  N +  +  M +  K+ K     E F      
Sbjct: 304 IHGYSISGQWKETAGMFREMT--SQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K ++++ + LL     EG F D+  ++  M+   I  +   FN V++   K G +++ 
Sbjct: 362 GHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDET 421

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I   M+  GV P   TY I+I  + +   +G++  A   F  M+  G+ P  + +++L
Sbjct: 422 MLIFTQMQEQGVIPDACTYGIVIAAFSR---MGRLADAMDKFNQMIAMGLKPEGIVYHSL 478

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           I GFC   N+  A ++  EM S GI    +V +NS+IN LC +G++ EA  + D ++  G
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +P+V+T N+LI+G+     +EKA  + D +   G+ P V++YNTLID YC+ GR++D  
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL 598

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ML +GV P   TY  ++ GL  +G   G + + +E++ +G    + T  I++G L
Sbjct: 599 ILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGL 658

Query: 445 CKDGKSKKAV-------------------SLLDEMFKMEKEKKW-------------PNI 472
           C++    +A+                   +++D M+K+ K ++              PN 
Sbjct: 659 CRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNA 718

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            TY V+IK   ++G +E+A+ + + + + G  P+      +   ++EKG I     +M+ 
Sbjct: 719 STYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFK 778

Query: 533 ISG 535
           + G
Sbjct: 779 VDG 781



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 215/429 (50%), Gaps = 43/429 (10%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMK 178
           ++LM    +  +P +GF  F R    GLK  V+  + LL+ L    + +D V  +   M 
Sbjct: 123 NILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMP 182

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYCKKGG 236
              +E +  S+N V+  LC+  +  +A D++  M  KS G SP VVTYN +I G  ++G 
Sbjct: 183 ELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGE 242

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +    KA  +F +M++ G++P+ VT+ ++ID  CK   +  A  V  +M S+G     VT
Sbjct: 243 VS---KACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVT 299

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN +I+G  + G+  E   +  EM + GL PN+VT N+ ++  CK    ++A   FD ++
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMA 359

Query: 357 EQGLSPSVITY-----------------------------------NTLIDAYCKEGRME 381
            +G  P+++TY                                   N +IDAY K G M+
Sbjct: 360 AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMD 419

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +   +   M ++GV+PD  TY  +IA  SR G +    +  N+++  G++   + Y+ L+
Sbjct: 420 ETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLI 479

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              C  G   KA  L+ EM  M +    PNIV +N +I   C++G++ +A+ + + ++  
Sbjct: 480 QGFCMHGNLVKAKELVSEM--MSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537

Query: 502 GLIPNQTTY 510
           G  P+  T+
Sbjct: 538 GERPDVITF 546



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 177/412 (42%), Gaps = 83/412 (20%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ED  +++ E+ R+ I +   S N     L +A     +S    D  SL V+        L
Sbjct: 54  EDAHHLFDELLRQTIPVPERSLNGFFTALARA----PSSAACRDGPSLAVA--------L 101

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF----- 282
            +  C++    ++               LP   T+N L+D  C+    +    +F     
Sbjct: 102 FNRICREEARPRV--------------ALPTVCTYNILMDCCCRTRRPTVGFALFGRFLK 147

Query: 283 -------------------------------EEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
                                            M   G+    ++YN+++  LC D +  
Sbjct: 148 TGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQ 207

Query: 312 EAVALRDEMM--ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            A+ L   M+  + G  PNVVT N +I+G  ++  V KA  LF ++ +QG+ P V+TY +
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTS 267

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +IDA CK   M+ A  +   M+  G  P+  TYNC+I G S  G  +    +  E+ + G
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG 327

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   +VT N  + +LCK GKSK+A    D    M  +   PN+VTY+VL+ G+  +G   
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDS---MAAKGHKPNLVTYSVLLHGYATEGCFV 384

Query: 490 DANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
           D   L N +   G++ +Q  + IV +                +M E+G IPD
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPD 436



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 169/353 (47%), Gaps = 39/353 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-ELNLDSFNFVLNGLCKAGKLNK 204
           GLK   +  + L++     G     + +  EM  R I   N+  FN ++N LCK G++ +
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A DI + +  +G  P V+T+N LIDGY   G +GK+ KA  V   M+  GI P+ V++NT
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGY---GLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL-------------- 310
           LIDG+C++  I   + +F EM S G+    +TY  +++GL  DG+               
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 311 ---------------------DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                                DEA+A+  ++ A  +K N+   N +I+   K +  E+A+
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAK 703

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LFD IS  GL P+  TY  +I    KEG +E+A  M + M   G  P     N +I  L
Sbjct: 704 ELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVL 763

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             +G +    N M ++    +     T ++L+    ++GK  + V LL   ++
Sbjct: 764 LEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 34/224 (15%)

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           AL N  C+++   + RV           P+V TYN L+D  C+  R    FA+    L  
Sbjct: 100 ALFNRICREE--ARPRVAL---------PTVCTYNILMDCCCRTRRPTVGFALFGRFLKT 148

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIM-NELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           G+  DV   + L+  L      + V N++ + +   G+    ++YN +V  LC+D +S++
Sbjct: 149 GLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQR 208

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-- 510
           A+ LL  M K +     PN+VTYN +I G  ++G++  A  L +E++++G++P+  TY  
Sbjct: 209 ALDLLHTMVK-KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTS 267

Query: 511 --------------QIVREEMMEKGFIPDIEG-----HMYNISG 535
                         ++V  +M+  GF P+        H Y+ISG
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISG 311


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 49/503 (9%)

Query: 60  SHSLLLTGRLL---HSLVVAKKYPKIRSFLHMFVKNGKF----TSVSTIFH--ALSTCSD 110
           SH L  +  L    H L  A+ +P  RS L   +  G       S+  + H  AL+    
Sbjct: 64  SHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPR 123

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
                S++  +L L   + +       A  R  +  +  +  +CN +L  L +E   E  
Sbjct: 124 RSALPSVVDTLLSLLADRGLLDD-AVLALARVRELRVPPNTRTCNHILLCLARERSSELA 182

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +++++       N+ +FN +++ LCK G L +A  ++  MK++G SP VVTYN LIDG
Sbjct: 183 WRLFEQLPAP----NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDG 238

Query: 231 YCKKGGI--------------------------------GKMYKADAVFKDMVENGILPN 258
           Y K G +                                G+M +A + F +M   G++ N
Sbjct: 239 YGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMAN 298

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VTF+T +D FCK+  +  AMK+F +M   G+    VTY  L++G C  G+LD+A+ L +
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+  NVVT   L++G CK+  V +A  +F  +   G+  + + Y TLI  +    
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
             E A ++ + M D+G+  DVS Y  LI GL     ++  ++++N++   G++   V Y 
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYT 478

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++ A  K  K  +A++LL    KM      PNIVTY  L+ G C+ G +++A    N++
Sbjct: 479 NIMDACFKARKESEAIALLQ---KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKM 535

Query: 499 LEKGLIPNQTTYQIVREEMMEKG 521
           ++ GL PN   Y  + + + + G
Sbjct: 536 VDLGLEPNVQAYTALVDGLCKNG 558



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 206/396 (52%), Gaps = 22/396 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V++ N L+    K G+ E     + EMKR  +  N+ +F+  ++  CK G + +A
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREA 318

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M+  G+ P  VTY  L+DG CK    G++  A  +  +MV+ G+  N VT+  L
Sbjct: 319 MKLFAQMRMKGMKPNEVTYTCLVDGTCKA---GRLDDALVLTNEMVQQGVPLNVVTYTVL 375

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG CK+  ++ A  VF  M   GI A  + Y +LI+G  V    + A++L  EM   G+
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + +V    ALI G C  + +++A+ L + + E GL P+ + Y  ++DA  K  +  +A A
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+D G  P++ TY  L+ GL + G+++   +  N++V+ G+   +  Y  LV  LC
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL-- 503
           K+G+  KAV LLDEM  ++K     N+V  + L+ G  ++G L+DA  L  +++  GL  
Sbjct: 556 KNGRLDKAVLLLDEM--IDKGMSLDNVVCTS-LMDGHLKQGNLQDAFALKAKMINSGLQL 612

Query: 504 -----------IPNQTTYQIVRE---EMMEKGFIPD 525
                        N    Q  RE   EM+E G  PD
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 217/428 (50%), Gaps = 10/428 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  + K G+   V  +   +  C    CR  ++  + L+  + K  +    +  F   
Sbjct: 234 SLIDGYGKCGELEEVEKLVGEMRGCG---CRPDVVTYNALVNCFCKFGRMERAYSYFAEM 290

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              G+ ++V++ +  + A  K G   +   ++ +M+ + ++ N  ++  +++G CKAG+L
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A  +  +M   GV   VVTY +L+DG CK+   GK+ +A+ VF+ M   GI  NE+ +
Sbjct: 351 DDALVLTNEMVQQGVPLNVVTYTVLVDGLCKE---GKVAEAEDVFRLMERAGIRANELLY 407

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            TLI G    +N   A+ +  EM   G+   V  Y +LI GLC   KLDEA +L ++M  
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GLKPN V    +++   K +   +A  L   + + G  P+++TY  L+D  CK G +++
Sbjct: 468 CGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDE 527

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A +  N M+D G+ P+V  Y  L+ GL + G ++    +++E+++ GM    V    L+ 
Sbjct: 528 AISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G  + A +L     KM       ++  Y   + GFC    +++A  +L+E++E G
Sbjct: 588 GHLKQGNLQDAFAL---KAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG 644

Query: 503 LIPNQTTY 510
           + P+   Y
Sbjct: 645 ITPDAVVY 652



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 202/409 (49%), Gaps = 34/409 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K G+     + F  +    + +  N +     + A+ KN       + F +  
Sbjct: 269 ALVNCFCKFGRMERAYSYFAEMK--REGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR 326

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+K + ++   L+    K G+ +D   +  EM ++ + LN+ ++  +++GLCK GK+ 
Sbjct: 327 MKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVA 386

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYC----------------KKG------------ 235
           +A D+   M+  G+    + Y  LI G+                  KG            
Sbjct: 387 EAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALI 446

Query: 236 ----GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                + K+ +A ++   M E G+ PN V +  ++D   K    S A+ + ++M   G  
Sbjct: 447 WGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR 506

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTY +L++GLC  G +DEA++  ++M+  GL+PNV    AL++G CK   ++KA +L
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLL 566

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D++ ++G+S   +   +L+D + K+G ++DAFA++  M++ G+  D+  Y C + G   
Sbjct: 567 LDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCN 626

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
              ++  R +++E++ NG+    V YN L+    K G  ++A  L +EM
Sbjct: 627 LNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 3/201 (1%)

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PNV T N +I+  CK+  + +AR L   +   G SP V+TYN+LID Y K G +E+   +
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M   G  PDV TYN L+    + G +E   +   E+   G+ A +VT++  V A CK
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G  ++A+ L  +M +M+  K  PN VTY  L+ G C+ G+L+DA  L NE++++G+  N
Sbjct: 312 NGMVREAMKLFAQM-RMKGMK--PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
             TY ++ + + ++G + + E
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAE 389



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 7/228 (3%)

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           ++L++ L   G LD+AV     +    + PN  T N ++    +++  E A  LF    E
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLF----E 187

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           Q  +P+V T+N +ID  CKEG + +A A+   M   G  PDV TYN LI G  + G +E 
Sbjct: 188 QLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
           V  ++ E+   G R  +VTYN LV   CK G+ ++A S   E   M++E    N+VT++ 
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAE---MKREGVMANVVTFST 304

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +  FC+ G + +A  L  ++  KG+ PN+ TY  + +   + G + D
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDD 352



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 32/205 (15%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++I   +M A  K  K        ++  D G + ++++   L+  L K G  ++    +
Sbjct: 473 NNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF 532

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M    +E N+ ++  +++GLCK G+L+KA  ++++M   G+S   V    L+DG+ K+
Sbjct: 533 NKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ 592

Query: 235 GGIGKMY--------------------------------KADAVFKDMVENGILPNEVTF 262
           G +   +                                +A  V  +M+ENGI P+ V +
Sbjct: 593 GNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652

Query: 263 NTLIDGFCKDENISAAMKVFEEMGS 287
           N LI+   K  N+  A  +  EM S
Sbjct: 653 NCLINKCQKLGNMEEAAILQNEMES 677


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 221/388 (56%), Gaps = 13/388 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V+ C+ L+  L ++G  ++    + +  +R + LN   FN +++G  +  +    
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M    V P VVTY +L+ G  ++G   ++ +A A+F  +++ G  P+ + + TL
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQG---RLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGFCK  + +  +++F+ M S+GI   +  YN LIN    +G ++  + L  E++  GL
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P++VT N +I G+C  K+  KA  LF+ +      P+ IT+  LIDAYCK+GRM+DA  
Sbjct: 622 EPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAML 681

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + +SML+RG  P++ TY+CLI G  +  N E    +  +++ + +   +V+Y+IL+  LC
Sbjct: 682 IFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLC 741

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G  ++A SL    F+    +   P+++ Y +LI+G+C+ G+L +A  L + +L  G++
Sbjct: 742 KKGLMEEA-SL---AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797

Query: 505 PNQTTYQIVREEMMEKGFIPDIEGHMYN 532
           P+     ++++ + E GF  D +  +Y+
Sbjct: 798 PD----DLLQKALAEYGF-QDSQASIYS 820



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 249/545 (45%), Gaps = 55/545 (10%)

Query: 7   STIEDITELIRNHHWS-----KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASH 61
           + +  I +   ++++S      L N  P  +   +F   ++P   LR+F W+   L   H
Sbjct: 28  TVVHQIAKAFHHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCH 87

Query: 62  SLLLTGRLLHSLVVAKKY-PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
            +     + H L+  + + P  R F  M    G+F ++  +     +  +     S +  
Sbjct: 88  PVQSFCGIAHVLLRHRMFDPATRVFDRMV---GQFGNLEVLGEFHGSFRNYGSNPSTVYS 144

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+  Y +N       + F      G+  S  + +++L  L+   + + +   Y+EM + 
Sbjct: 145 FLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCK- 203

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
                L  + FV N   K G++ K  +    +   G+ PK+V  N ++ G C    IG  
Sbjct: 204 ----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV- 258

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A   F  MV +G  PN VTF+TLI+ +CK+  +  A  ++  M   GI   +V Y+ L
Sbjct: 259 --ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSIL 316

Query: 301 INGLCVDGKLDE-----------------------------------AVALRDEMMASGL 325
           INGL   GKL+E                                   A+ +   M+  G+
Sbjct: 317 INGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGI 376

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT + LING C+   V +A  +F  I +QGL PSV+TY++LID +CK   + D F 
Sbjct: 377 SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFG 436

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML +G +PDV   + LI GLSR+G ++       + V  G+      +N L+    
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +  +++  + +      M   K  P++VTY VL+KG  ++G+L++A  L  +LL+KG  P
Sbjct: 497 RLKRTRDGLKM---YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 506 NQTTY 510
           +   Y
Sbjct: 554 DHIIY 558



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 206/435 (47%), Gaps = 76/435 (17%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ + L+    KE + ++   +Y  M  + I  +L  ++ ++NGL +AGKL + 
Sbjct: 270 GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEG 329

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +     + GV   VV ++ ++D Y + G +GK   A  V+  M++ GI PN VT++ L
Sbjct: 330 NSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGK---AIEVYTRMLKEGISPNVVTYSIL 386

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C++  +  A  VF ++   G+   V+TY+SLI+G C    L +   L   M+  G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS------------------------ 361
            P+VV  + LING  ++ ++++A   F    ++GL+                        
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 362 -----------PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR----------------- 393
                      P V+TY  L+    ++GR+++A A+   +L +                 
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 394 ------------------GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
                             G+ PD+  YN LI    REG VE V  ++ E++  G+   +V
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN ++   C      KA+ L  E+ K  + +  PN +T+ +LI  +C+ G+++DA  + 
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQ--PNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 496 NELLEKGLIPNQTTY 510
           + +LE+G  PN  TY
Sbjct: 684 SSMLERGPEPNILTY 698



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 165/325 (50%), Gaps = 7/325 (2%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+A KR    GL  +    N L+    +  +  D   +Y  M   ++  ++ ++  ++ G
Sbjct: 474 FQAVKR----GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L + G+L++A  +   +   G SP  + Y  LIDG+CKK       +   +FK M  NGI
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQ---IFKLMQSNGI 586

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+   +N LI+ F ++  +   +++  E+  +G+   +VTYN++I G C      +A+ 
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + +     +PN +T   LI+ +CK   ++ A ++F  + E+G  P+++TY+ LID Y 
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K    E AF +   ML   V P++ +Y+ LI GL ++G +E         +   +   ++
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVI 766

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM 460
            Y IL+   CK G+  +A+ L D M
Sbjct: 767 AYGILIRGYCKVGRLAEAMMLYDHM 791



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 176/327 (53%), Gaps = 7/327 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G + +   G Y +   V++   L++ L ++G+ ++   ++ ++ ++    +   +  +++
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK         I + M+S G+ P +  YN+LI+ + ++G +  + +   + +++++ G
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE---LLREIIKYG 620

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+NT+I G+C  +  S A+K+FE +         +T+  LI+  C DG++D+A+
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M+  G +PN++T + LI+G+ K +  E A  L++ +    +SP++++Y+ LID  
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK+G ME+A       + R +LPDV  Y  LI G  + G +     + + ++ N    G+
Sbjct: 741 CKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN----GI 796

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  ++L  AL + G      S+   +F
Sbjct: 797 MPDDLLQKALAEYGFQDSQASIYSTVF 823



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 174/364 (47%), Gaps = 52/364 (14%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           + G L    +     ++ G +P  V Y+ L+  YC+ G + +   A   F  M + G+  
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDR---AVDTFAWMSKMGVSI 173

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +    + ++D     + I   ++ +EEM       G+  Y  + N     G++++ +   
Sbjct: 174 SHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLKRGEVEKGLNFH 228

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++  GL P +V  N ++ G C    +  A   FD +   G SP+++T++TLI+ YCKE
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------GVR------ 419
            R+++AF++ N M+++G++PD+  Y+ LI GL R G +E            GV+      
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 420 -----------------NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
                             +   ++  G+   +VTY+IL+  LC++G+  +A  +  ++ K
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEM 517
              E   P+++TY+ LI GFC+   L D  GL   +L KG +P+     ++     R+ M
Sbjct: 409 QGLE---PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465

Query: 518 MEKG 521
           M++ 
Sbjct: 466 MDEA 469



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 13/301 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + II   L+  + K   P  G + FK     G+   +   N L+    +EG  E+V  + 
Sbjct: 554 DHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELL 613

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +E+ +  +E ++ ++N ++ G C     +KA  + E +K     P  +T+ ILID YCK 
Sbjct: 614 REIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G+M  A  +F  M+E G  PN +T++ LIDG+ K EN  +A +++E+M    ++  +
Sbjct: 674 ---GRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNI 730

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V+Y+ LI+GLC  G ++EA       +   L P+V+    LI G+CK   + +A +L+D 
Sbjct: 731 VSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDH 790

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G+ P         D   ++   E  F    + +   V P+ S  N L+  +S  G+
Sbjct: 791 MLVNGIMP---------DDLLQKALAEYGFQDSQASIYSTVFPE-SPLNLLVCPVSSMGD 840

Query: 415 V 415
           +
Sbjct: 841 I 841


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 190/325 (58%), Gaps = 10/325 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +++GLCKA + ++A D++E+M   G  P + TY  LI G+CK     K   A  VF
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK---KSDDALRVF 112

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCV 306
           + +V  G  P+ VT++ LIDG CK+  +  A+ +F  M   G      VTYNSLI+G C 
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            GK+DEA+ L + M  +G  P+VVT   L+NGFCK   ++ A  L + ++ +GL+P+V+T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + +L+D  C+E R+ DA  +   M  +   P V TYN ++ G  R   +E  R  M E +
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           +      +V++NI++  LCK  +S +A+ L++E     + +  P++V Y  +I   C++ 
Sbjct: 293 D--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEA---RRRRCNPDVVMYTTVIDVLCREK 347

Query: 487 KLEDANGLLNELLEK-GLIPNQTTY 510
           K+++A  +  ++LE+ G +PN  TY
Sbjct: 348 KVDEACRVYRKMLEEPGCLPNSITY 372



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 171/296 (57%), Gaps = 9/296 (3%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P  VTYN LI G CK     + Y    + ++MV +G +P+  T+ TLI GFCK +    A
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYD---LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 108

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-LKPNVVTSNALIN 337
           ++VFE++ + G    VVTY+ LI+GLC +G+L EA+ L   M+ SG   PN VT N+LI+
Sbjct: 109 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 168

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           GFC+   +++A  L + ++E G SP V+TY TL++ +CK  R++DA+ + N M  +G+ P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V T+  L+ GL RE  +    +I+ E+        + TYN ++   C+  + ++A    
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA---- 284

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              F +E+    PN+V++N++I+G C+  +  +A  L+ E   +   P+   Y  V
Sbjct: 285 -RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 339



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 148/259 (57%), Gaps = 6/259 (2%)

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P  VT+N+LI G CK E  S A  + EEM   G    + TY +LI G C   K D+A+ 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAY 374
           + ++++A G +P+VVT + LI+G CK+  +++A  LF  + + G   P+ +TYN+LI  +
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C+ G+M++A  +   M + G  PDV TY  L+ G  +   ++   +++N++   G+   +
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VT+  L+  LC++ +   AV +L E   M ++   P + TYN ++ G+C+  +LE+A   
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGE---MRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287

Query: 495 LNELLEKGLIPNQTTYQIV 513
           + E  E    PN  ++ I+
Sbjct: 288 MLE--EMDCPPNVVSFNIM 304



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 7/297 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    + +   L+    K  K +D   V++++  R    ++ +++ +++GLCK G+L +A
Sbjct: 84  GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 143

Query: 206 SDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            D+   M KS    P  VTYN LI G+C+   +GKM +A  + + M E G  P+ VT+ T
Sbjct: 144 IDLFGRMIKSGSCMPNTVTYNSLISGFCR---MGKMDEAMNLLERMAETGSSPDVVTYTT 200

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L++GFCK   +  A  +  +M   G+   VVT+ SL++GLC + +L +AV +  EM    
Sbjct: 201 LMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 260

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P V T N +++G+C+   +E+AR     + E    P+V+++N +I   CK  R  +A 
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 318

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNIMNELVNNGMRAGLVTYNIL 440
            +      R   PDV  Y  +I  L RE  V E  R     L   G     +TY+  
Sbjct: 319 ELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 10/268 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+   LV     P + ++   +    K G+      +F  +   S S   N++  + L+ 
Sbjct: 110 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLIS 168

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            + +  K        +R  + G    V++   L+    K  + +D   +  +M R+ +  
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ +F  +++GLC+  +L+ A  I+ +M+    SP V TYN ++DGYC+   + ++ +A 
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR---VNQLEEAR 285

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
                + E    PN V+FN +I G CK    S AM++ EE         VV Y ++I+ L
Sbjct: 286 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343

Query: 305 CVDGKLDEAVALRDEMM-ASGLKPNVVT 331
           C + K+DEA  +  +M+   G  PN +T
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSIT 371


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 220/414 (53%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C +++  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +V   M  +G+ P+  T++ LI+G CK+  +  A  +F+EM  +G+    VT+ +L
Sbjct: 191 FRLKSV---MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+ L +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   PN+VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYLPNVVT 418



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   V+  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXL---AQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A AL DEM+ +GL P
Sbjct: 180 GYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +PN 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK   I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M    KE    + V Y  LI   CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI---KENIRLDDVAYTALISXLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 105/287 (36%), Gaps = 81/287 (28%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   +I  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+   CK G+   A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSI------TKWGLRP 169

Query: 471 NIVTYNV-----------------------------------LIKGFCQKGKLEDANGLL 495
           ++V++N                                    LI G C++ K++DAN L 
Sbjct: 170 SVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALF 229

Query: 496 NELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           +E+L+ GL+PN  T+                  +  +M+ +  +PD+
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDL 276


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 229/435 (52%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S S +F  + 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  ++  L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 183 LMNGYIRLGDLNEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G  KK  ++
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL E   M+++
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKE---MQRD 416

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 190 LGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 249

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMS 309

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 310 MKGLKPDKFTYXTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKG 401



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 186 GYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI    K+G ++ A  + 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 366 GRSVDAEKMLREMLSVGLK---PDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 34/232 (14%)

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAM 386
           ++ + +LI     +K    A  +F  I E +G   S +   + LI AY + G + DA   
Sbjct: 35  LLEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVLSGLITAYLESGFLRDAIEC 94

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
                +  +     T   ++  L +    + V     E++  G  A L  +NIL+   CK
Sbjct: 95  YRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 154

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           DG  + A S+ D +       KW   P++V+YN L+ G+ + G L +   L + +L  G+
Sbjct: 155 DGDIRVAQSVFDAI------TKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGV 208

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD-------IEGHMYN 532
            P+  TY +                + +EM+ KG IP+       I+GH  N
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 260


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 210/425 (49%), Gaps = 46/425 (10%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++L Y +N      FE F R  + G + +  + + L+  L   G+  +      EM R  
Sbjct: 269 MILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHG 328

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +   + +F   +  LC  G++  A  I  DMK  G  P V TY  LI G      + +M 
Sbjct: 329 VLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ----RVSRM- 383

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI----------- 290
            A  +F  M  +G++PN VT+N L++   ++  I +A+ VF  MG HG            
Sbjct: 384 -AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELI 442

Query: 291 ------------------------AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
                                      +VTYN +I G C  G  D A+ + + M A+G +
Sbjct: 443 RGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQ 502

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+  +   LI+GFCK   +E A  +F+++ ++GL P+ +TY  LI  YCK+ +++ A  M
Sbjct: 503 PDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARM 562

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M   G  P+V TYN LI GL+++ N  G   +   ++   +   +VTY+ ++  LC 
Sbjct: 563 LERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCN 622

Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +G    A+ L  EMF KM K    PN+ TY+ LI+   Q+G++E+A  + +EL ++GLIP
Sbjct: 623 NG----AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 506 NQTTY 510
           ++ TY
Sbjct: 679 DEVTY 683



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  + +   LL  L K      V   Y ++ R  ++ NL  +N V+N LCK G +  A
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I+  +   G+ P   TY  +I GYC+   +   ++   +F  M E G  PN  T++TL
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE---IFNRMDEEGCEPNAATYSTL 304

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G C    ++ A+    EM  HG+   V T+ + I  LC  G++++A  +  +M   G 
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGC 364

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNV T  +LI+G   +++   A  LF  +S  G+ P+ +TYN L++   +   ++ A  
Sbjct: 365 KPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M   G LP+ S+YN LI G    G+ E   +++  ++       LVTYNI++   C
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYC 481

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G +  A+ +L+    M+     P+  +Y  LI GFC+  K+E A+G+ NE++++GL P
Sbjct: 482 DSGDTDVAIRVLE---LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCP 538

Query: 506 NQTTY 510
           N+ TY
Sbjct: 539 NEVTY 543



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 24/430 (5%)

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +FH +S   D +  N++  + LM   ++NM+       F   G +G   +  S N+L+R 
Sbjct: 387 LFHRMS--RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRG 444

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
               G  E    +   M + R    L ++N ++ G C +G  + A  ++E MK+ G  P 
Sbjct: 445 YCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPD 504

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
             +Y  LI G+CK   I KM  A  +F +M++ G+ PNEVT+  LI G+CKDE +  A +
Sbjct: 505 EWSYTELISGFCK---ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + E M   G    V TYN LI+GL        A  L   M+   + P+VVT + +ING C
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
               +  A  +F+ + + G  P++ TY++LI A  +EGR+E+A  M + +  +G++PD  
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  +I      G V+   + + E++N G +  L TY++L+  L  +    K V+L +  
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAA 741

Query: 461 FKMEKEKKWPN--IVT-----------------YNVLIKGFCQKGKLEDANGLLNELLEK 501
                + +  N  +++                 Y+ L+    + G+  +AN L   ++ +
Sbjct: 742 STSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQ 801

Query: 502 GLIPNQTTYQ 511
              PNQ TY+
Sbjct: 802 SQCPNQDTYK 811



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 190/387 (49%), Gaps = 20/387 (5%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G+  + ++ N L+  L++  + +    V+  M +     N  S+N ++ G C 
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G   KA  ++ +M     +P +VTYNI+I GYC  G      +   V + M  NG  P+
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR---VLELMKANGCQPD 504

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E ++  LI GFCK   +  A  +F EM   G+    VTY +LI+G C D KLD A  + +
Sbjct: 505 EWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLE 564

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  SG +PNV T N LI+G  K+     A  L   + E+ +SP V+TY+T+I+  C  G
Sbjct: 565 RMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  A  M N M+  G LP++ TY+ LI  L +EG VE    + +EL   G+    VTY 
Sbjct: 625 AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYV 684

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++      GK  +A   L EM     +   P + TY+VLIK            GL NE+
Sbjct: 685 KMIEVCVMSGKVDRAFDFLGEMINAGCQ---PTLQTYDVLIK------------GLQNEM 729

Query: 499 LEKGLI--PNQTTYQIVREEMMEKGFI 523
           +   L+  PN  +     ++++ K  I
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVI 756



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 169/387 (43%), Gaps = 28/387 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K  K  L    F    D GL  + ++   L+    K+ K +    + + MKR  
Sbjct: 511 LISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++N +++GL K    + A ++ + M    +SP VVTY+ +I+G C  G I    
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPL-- 628

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F  MV++G LPN  T+++LI    ++  +  A ++F E+   G+    VTY  +I
Sbjct: 629 -ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL--------FD 353
               + GK+D A     EM+ +G +P + T + LI G   + +  K   L        FD
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFD 747

Query: 354 D--------------ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           D              ++E     S   Y+ L+    + GR  +A  +  SM+ +   P+ 
Sbjct: 748 DQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQ 807

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TY   +  L R   V+   ++   + +      L  Y  L+  LC+  + K+A  + ++
Sbjct: 808 DTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEK 867

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           M          + + + +LI G    G
Sbjct: 868 MLSRALNA---DEIVWTILINGLLGAG 891



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 3/203 (1%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            ++ +A+   D     G K  + T   L+    K  +       +  I  +GL P+++ Y
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N++I+A CK+G + DA ++ N +   G+ PD  TY  +I G  R  +++    I N +  
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G      TY+ L+  LC  G+  +A+  + E   M +    P + T+   I   C  G+
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISE---MTRHGVLPTVHTFTAPIVALCDMGR 348

Query: 488 LEDANGLLNELLEKGLIPNQTTY 510
           +EDA  +  ++ +KG  PN  TY
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTY 371



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 3/191 (1%)

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I     K  + +A    D  S++G    + TY TL+    K           + +L  G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + P++  YN +I  L ++GNV    +I+N++  +GM+    TY  ++   C++     A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            + +   +M++E   PN  TY+ LI G C  G++ +A   ++E+   G++P   T+    
Sbjct: 284 EIFN---RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340

Query: 515 EEMMEKGFIPD 525
             + + G I D
Sbjct: 341 VALCDMGRIED 351



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 152/379 (40%), Gaps = 64/379 (16%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K  K    S +F+ +      LC N +    L+  Y K+ K        +R    G +
Sbjct: 515 FCKISKMELASGMFNEMM--DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V + N L+  L K+  F   E + K M   +I  ++ +++ V+NGLC  G +  A ++
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV-------- 260
              M   G  P + TY+ LI      G  G++ +A+ +F ++ + G++P+EV        
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQAL---GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEV 689

Query: 261 ---------------------------TFNTLIDGFCKDENI---------SAAMKVFEE 284
                                      T++ LI G  ++E +         +A+   F++
Sbjct: 690 CVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTSTFDD 748

Query: 285 MGSHGIAAGVVT--------------YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
              +     V++              Y++L++ L   G+  EA  L   M++    PN  
Sbjct: 749 QIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T    +    +   V+ A  +F  +S+Q     +  Y  LI   C+  R ++A  +   M
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868

Query: 391 LDRGVLPDVSTYNCLIAGL 409
           L R +  D   +  LI GL
Sbjct: 869 LSRALNADEIVWTILINGL 887


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 197/338 (58%), Gaps = 13/338 (3%)

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK-SLGVSPKVVTYNILIDGYCKKGGI 237
           R  +  N  ++N V+NGLCKA   +KA +++++M+    V+P +VTY+ +I+G+CK+G  
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG-- 59

Query: 238 GKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            +M +A  + ++MV  +G+ P+ VT+ +++DG C+D  +  A ++  EM   G+     T
Sbjct: 60  -EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFT 118

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI- 355
           +++LI G C   K+DEA+ L  E++ S  + + V+S+ALI G C+++ + +A  LF ++ 
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178

Query: 356 --SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
              +    P V+TY  LID +CK G +E A  M   M  R  +P+V TY+ L+ GL + G
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NI 472
           +++   ++   + + G    +VTY  L+  LC   K   A  L+DEM         P + 
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM----TATCCPADT 294

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           V+YN L+ G+C+ G++E+A  L  E+  K  +P++ TY
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITY 332



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 200/374 (53%), Gaps = 14/374 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V++   ++  L ++GK +    + +EMK + +E +  +F+ ++ G C A K+++A
Sbjct: 76  GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM--VENGIL-PNEVTF 262
             + +++ +       V+ + LI G C++  IG+ Y+   +F++M   E+G   P+ VT+
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYE---LFQEMEMREDGAWKPDVVTY 192

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             LIDGFCK  N+  AMK+   M        VVTY+SL++GLC  G LD+A+ L   M +
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  PNVVT   LI+G C    V+ AR+L D+++        ++YN L+D YC+ GR+E+
Sbjct: 253 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEE 312

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILV 441
           A  +   M  +  LPD  TY CL+ G      +E  R ++  +    G+   +VTY+I+V
Sbjct: 313 AKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 372

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
               +  +  +A   + EM         PN VTY+ LI G C+ G++  A     E+L+ 
Sbjct: 373 AGYSRAKRFVEAAEFIQEMI---ARNVAPNAVTYSSLIDGLCKAGRVNHA----MEVLKN 425

Query: 502 GLIPNQTTYQIVRE 515
              P+  TY IV E
Sbjct: 426 VDKPDVVTYTIVIE 439



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 197/388 (50%), Gaps = 19/388 (4%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+  +   D   K  V++   L+    K G  E    +   M+ R+   N+ +++ +L+G
Sbjct: 174 FQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 233

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCKAG L++A D+   M S G  P VVTY  LI G C      K+  A  +  +M     
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC---AAHKVDAARLLMDEMTATCC 290

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             + V++N L+DG+C+   I  A ++F+EM +       +TY  L+ G C   +L+EA  
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350

Query: 316 LRDEM-MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           L + M  A+G+ P+VVT + ++ G+ + K   +A     ++  + ++P+ +TY++LID  
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR+  A  +  + +D+   PDV TY  +I GL      E    ++ E+VN  +   +
Sbjct: 411 CKAGRVNHAMEVLKN-VDK---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            T+N ++GALC+ G   +A  LL  M     E   P +VTY  L++GF + G++E A  L
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE---PGMVTYTTLLEGFSRTGRMEIAYEL 523

Query: 495 LNELLEKG--------LIPNQTTYQIVR 514
              +  K         L+P Q    ++R
Sbjct: 524 FEVMRRKAKKSSSAANLVPEQAFSALIR 551



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 189/362 (52%), Gaps = 12/362 (3%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ + LL  L K G  +    +++ M  +    N+ ++  +++GLC A K++ A  +M+
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M +       V+YN L+DGYC+   +G++ +A  +FK+M     LP+ +T+  L+ GFC
Sbjct: 284 EMTATCCPADTVSYNALLDGYCR---LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340

Query: 271 KDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
               +  A  + E M  + GI   VVTY+ ++ G     +  EA     EM+A  + PN 
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT ++LI+G CK   V  A  +  ++ +    P V+TY  +I+  C   R E+A  +   
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEE 456

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++ V P V T+N +I  L R G+++    ++  +  +G+  G+VTY  L+    + G+
Sbjct: 457 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516

Query: 450 SKKAVSLLDEM-FKMEKEKKWPNIV---TYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            + A  L + M  K +K     N+V    ++ LI+G C+  +++ A  ++ EL  +   P
Sbjct: 517 MEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 576

Query: 506 NQ 507
            +
Sbjct: 577 AE 578



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 203/423 (47%), Gaps = 45/423 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S LH   K G       +F  +++  C  ++   + +I  L  A+  +    L  E    
Sbjct: 229 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 288

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
                  +  +S N LL    + G+ E+ + ++KEM  +    +  ++  ++ G C A +
Sbjct: 289 C----CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASR 344

Query: 202 LNKASDIMEDMKSL-GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           L +A  ++E+MK+  G+ P VVTY+I++ GY +     +  +A    ++M+   + PN V
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK---RFVEAAEFIQEMIARNVAPNAV 401

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+++LIDG CK   ++ AM+V + +        VVTY  +I GLC   + +EA+ L +EM
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEM 457

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +   ++P+V T N++I   C+   +++A  L   ++  GL P ++TY TL++ + + GRM
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E A+ +   M  +                          N++ E            ++ L
Sbjct: 518 EIAYELFEVMRRKA------------------KKSSSAANLVPEQ----------AFSAL 549

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LCK  +  KA+++++E+   E E    + +    ++ G  + G+ E+A  L+N + +
Sbjct: 550 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLA---IVDGLLRAGRTEEAGKLINSISK 606

Query: 501 KGL 503
            GL
Sbjct: 607 VGL 609



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 126/225 (56%), Gaps = 4/225 (1%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKA 348
           +A    TYN ++NGLC      +A  +  EM     + P++VT + +INGFCK+  +++A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 349 -RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
             +L + ++  G++P V+TY +++D  C++G+M+ A  M   M  +GV PD  T++ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G      V+    +  E++ +  R   V+ + L+  LC++ +  +A  L  EM +M ++ 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEM-EMREDG 183

Query: 468 KW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            W P++VTY  LI GFC+ G LE A  +L  +  +  +PN  TY 
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 228


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 266/535 (49%), Gaps = 50/535 (9%)

Query: 4   SANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSL 63
             N  +  IT+++ N+  +   N D +++I     S   P +  R     ++ +   HS 
Sbjct: 23  QPNEIVHKITQILVNYSKTS-NNPDLHSII-----SCITPHVTYRVL---SQPILQPHSC 73

Query: 64  LLTGRLL---HSLVVAKKYPKIRSFLHMFVK---NGKFTSVSTIFHALSTCSDSLCRNSI 117
           L     L   HS +  K  P +++ L +  +     KF ++ +I + L T SD  C  S 
Sbjct: 74  LAFFHFLKTQHSNISLK--PDLKAHLILISRLFEARKFATMKSILNGLVTDSDIECPVSS 131

Query: 118 IIDMLMLAYVKNMKPHLG----------------FEAFKRAGDY----GLKSSVLSCNQL 157
           I+D+     V   + H                  F+   R  DY    GL     SC  L
Sbjct: 132 IVDL-----VDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVL 186

Query: 158 LRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L AL + G+ +  V + ++ ++  + E+ + S   V++ LC+ G++ KA ++M++M   G
Sbjct: 187 LLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKG 246

Query: 217 -VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
            V P V TYN L++ Y    G       D + K M +  ++ +  T++ LI  +    +I
Sbjct: 247 IVKPNVFTYNTLLNAYV---GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDI 303

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A K+FEEM    I   V  Y+S+I+     G +  A AL DEM    + PN  T  AL
Sbjct: 304 EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGAL 363

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G CK   +E A +L  ++  +G+  +++ +NT +D YC+ G+M++A  ++  M  +G+
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI 423

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
             DV TYN L  GL +    +  + I+N +V  G++  +VT+ + +   CK+G   +A  
Sbjct: 424 NADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAER 483

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L  +M   EK+ + PNI+TYN LI  +C+K K++ A+ + +E++ KGL+P+  TY
Sbjct: 484 LFRDM---EKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTY 535



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 183/314 (58%), Gaps = 3/314 (0%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           SV + + L++     G  E+ E +++EM+ + IE+++  ++ +++   + G + +A  + 
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALF 345

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M    + P   TY  LI G CK G   +M  A+ +  +M   G+  N V FNT +DG+
Sbjct: 346 DEMSQRDIVPNAHTYGALIGGVCKAG---QMEAAEILLLEMQSKGVDLNLVIFNTTMDGY 402

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   +  A+++   M   GI A V TYN L NGLC   + DEA  + + M+  G+KPNV
Sbjct: 403 CRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNV 462

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT    I  +CK+  + +A  LF D+ ++G  P++ITYNTLIDAYCK+ +++ A  +++ 
Sbjct: 463 VTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSE 522

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+++G+LPD+ TY+ LI G    G V+    + NE+   G+   + TY  ++  L K+G+
Sbjct: 523 MINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGR 582

Query: 450 SKKAVSLLDEMFKM 463
           + +A  L DEM K+
Sbjct: 583 ADEAFKLYDEMMKI 596



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 162/304 (53%), Gaps = 7/304 (2%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           ++ EM +R I  N  ++  ++ G+CKAG++  A  ++ +M+S GV   +V +N  +DGYC
Sbjct: 344 LFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           ++G + +  +  A+   M + GI  +  T+N L +G CK      A  +   M   G+  
Sbjct: 404 RRGKMDEALRLQAI---MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKP 460

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VVT+   I   C +G L EA  L  +M   G  PN++T N LI+ +CKK+ V++A  + 
Sbjct: 461 NVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIK 520

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++  +GL P + TY++LI   C  GR+++A  + N M  +G+  +V+TY  +I+GLS+E
Sbjct: 521 SEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKE 580

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD----GKSKKAVSLLDEMFKMEKEKK 468
           G  +    + +E++  G+      +  LVG+  K     G   +  S  D + + E    
Sbjct: 581 GRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGLDIQKASDSDSVLRRENCCT 640

Query: 469 WPNI 472
           WP I
Sbjct: 641 WPLI 644



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 13/287 (4%)

Query: 247 FKDMVENGILPNEVTFNTL-IDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGL 304
           F  MVE+      V   TL ID  C+   +  A ++ +EM   GI    V TYN+L+N  
Sbjct: 203 FHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAY 262

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNA----LINGFCKKKLVEKARVLFDDISEQGL 360
              G+ D      DE++    K  VV S A    LI  +     +E+A  +F+++ E+ +
Sbjct: 263 V--GRKDRKGV--DEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNI 318

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
              V  Y+++I    + G M+ AFA+ + M  R ++P+  TY  LI G+ + G +E    
Sbjct: 319 EMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEI 378

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+ + G+   LV +N  +   C+ GK  +A+ L      MEK+    ++ TYN+L  
Sbjct: 379 LLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL---QAIMEKKGINADVFTYNILAN 435

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           G C+  + ++A  +LN ++EKG+ PN  T+ +  E   ++G + + E
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 5/168 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           +L+S+V     P + +F   + ++ K G       +F  +    +    N I  + L+ A
Sbjct: 449 ILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGE--VPNIITYNTLIDA 506

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  K     +      + GL   + + + L+      G+ ++   ++ EM+ + I  N
Sbjct: 507 YCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + ++  +++GL K G+ ++A  + ++M  +G+ P    +  L+  + K
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 209/391 (53%), Gaps = 12/391 (3%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           +E F      G+  SV++ N L+ A   +G       V+ +M  RRI+ N+ ++  ++  
Sbjct: 158 WELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICA 217

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LC+   +  A  +  +MK  G+ P + TYN L+  + K+  I     A   + D+++ G+
Sbjct: 218 LCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH---ALVFYYDLLKCGL 274

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +PN+V F TLIDG C+   I+ A  +F +M  + +A  V  YNSLI+G    G   EA+A
Sbjct: 275 VPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALA 334

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
              E++  GL+P+  T + ++ G C       A V    +SE G+ P V+TY++LID + 
Sbjct: 335 FFQEIIRKGLRPDEFTCSIVVRGLCD------ALVTCTRMSEVGVEPHVVTYSSLIDGHS 388

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G ME A A+   M+ +GV P+V TY  LI G ++ G+++    +  E+   G+ +  +
Sbjct: 389 KNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAI 448

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI---VTYNVLIKGFCQKGKLEDAN 492
           T ++LV  LC++ + + AV  + E    +K +K P+I   VTY  LI G    G+  +A 
Sbjct: 449 TVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEAC 508

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
              + + + G++P++ TY +V   +   G++
Sbjct: 509 HFFSCMRDSGMVPDRFTYTLVIRGLCMLGYV 539



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 12/292 (4%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P +   N ++DG  K   + ++++   +F +M+  G++P+ VT+NTLI+      +++ A
Sbjct: 136 PALPACNAILDGLVKAHMLARVWE---LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKA 192

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
            +V+++M +  I   VVTY ++I  LC +  + +A  L  EM  +G++PN+ T NAL++ 
Sbjct: 193 WEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSS 252

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
             K+  ++ A V + D+ + GL P+ + + TLID  C+  R+ +A  +   M    V P 
Sbjct: 253 HFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPT 312

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V  YN LI G  R G  +       E++  G+R    T +I+V  LC           L 
Sbjct: 313 VPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC---------DALV 363

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              +M +    P++VTY+ LI G  + G++E A  +  E++ KG+ PN  TY
Sbjct: 364 TCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTY 415



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 56/357 (15%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ ++ + N L+ +  K    +     Y ++ +  +  N   F  +++GLC+
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQ 290

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A ++ +A +I  DM    V+P V  YN LI G  + G      +A A F++++  G+ P+
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSG---YAQEALAFFQEIIRKGLRPD 347

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T + ++ G C       A+     M   G+   VVTY+SLI+G   +G+++ A+A+  
Sbjct: 348 EFTCSIVVRGLCD------ALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYT 401

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+A G++PNVVT  ALI+G  K   ++ A  L  ++ E+G+  + IT + L+D  C+E 
Sbjct: 402 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 461

Query: 379 RMEDA--FAMRNS---------------------------------------MLDRGVLP 397
           R++DA  F M  S                                       M D G++P
Sbjct: 462 RVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVP 521

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           D  TY  +I GL   G V     +  ++V  G++            +C D  S+++V
Sbjct: 522 DRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP------TKCAMVCPDIWSRESV 572


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 196/337 (58%), Gaps = 8/337 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +F+ ++NGLC   K  +A +  ++M + G  P + TYN +I G+CK   IGK   A  + 
Sbjct: 156 TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK---IGKTTVAVGLL 212

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M + G  P+ V +NT+IDG CKD  +S A+ +F E+   G+   V TY+ L++GLC  
Sbjct: 213 KKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNS 272

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            + +EA AL +EMM+  + P+VVT N L++  CK+ ++ +A+ +   + E+G+ P+  TY
Sbjct: 273 DQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATY 332

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N+L++ YC + ++ +A  + ++M+ +G +P+V +YN LI G  +   ++  R + +E+  
Sbjct: 333 NSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSF 392

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKG 486
            G+      YN L+  LC+ G+  +A     E+FK M+ +   P++VT  +L+   C+ G
Sbjct: 393 RGLIPNTFNYNTLISGLCQAGRHCEA----RELFKDMQAQGCSPDLVTCTILLDSLCKLG 448

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            L++A  L   + +  L PN  TY I+   M + G I
Sbjct: 449 YLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 203/373 (54%), Gaps = 6/373 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           ++  ++LL ALV+   +  V  + K ++  RIE ++  FN ++N   +  +++ A  ++ 
Sbjct: 84  IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +  LG  P  VT++ LI+G C +    K  +A   F +MV +G  PN  T+NT+I GFC
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFED---KFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K    + A+ + ++M   G    +V YN++I+GLC D  + EA+ +  E+   G++P+V 
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T + L++G C     E+A  LF+++    + P V+T+N L+D  CKEG + +A  +   M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +++GV P+ +TYN L+ G   +  V   R + + ++  G    +V+YNIL+   CK  + 
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  L DE   M      PN   YN LI G CQ G+  +A  L  ++  +G  P+  T 
Sbjct: 381 DEARELFDE---MSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTC 437

Query: 511 QIVREEMMEKGFI 523
            I+ + + + G++
Sbjct: 438 TILLDSLCKLGYL 450



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 197/375 (52%), Gaps = 6/375 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           R+    ++L+  + +  +    F    +    G +   ++ + L+  L  E KF      
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + EM     + NL ++N ++ G CK GK   A  +++ M   G  P +V YN +IDG CK
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
              + +   A  +F ++   G+ P+  T++ L+ G C  +    A  +F EM S  I   
Sbjct: 237 DRLVSE---ALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVT+N L++ LC +G L EA  +   M+  G++PN  T N+L+NG+C +  V +AR++FD
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  +G  P+V++YN LI+ YCK  R+++A  + + M  RG++P+   YN LI+GL + G
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAG 413

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
                R +  ++   G    LVT  IL+ +LCK G    A+ L      M+     PN+V
Sbjct: 414 RHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA---MQDSCLKPNLV 470

Query: 474 TYNVLIKGFCQKGKL 488
           TY++LI+   + GK+
Sbjct: 471 TYDILIRAMYKSGKI 485



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 157/305 (51%), Gaps = 19/305 (6%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  M+    LP  V F+ L+    + ++    + + + +    I   V  +N LIN    
Sbjct: 72  FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             ++D A ++  +++  G +P+ VT ++LING C +    +A   FD++   G  P++ T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNT+I  +CK G+   A  +   M   G  PD+  YN +I GL ++  V    +I +E+ 
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+R  + TY+IL+  LC   + ++A +L +EM  +      P++VT+N+L+   C++G
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN---IMPDVVTFNILVDKLCKEG 308

Query: 487 KLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHM 530
            L +A G++  ++EKG+ PN  TY                ++V + M+ KG +P++  + 
Sbjct: 309 MLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYN 368

Query: 531 YNISG 535
             I+G
Sbjct: 369 ILING 373



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 19/238 (7%)

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C    +++A+   + M+     P +V  + L++   + K       L   I    +   V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             +N LI+ + +  R++ AF++   ++  G  PD  T++ LI GL  E          +E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V +G +  L TYN ++   CK GK+  AV LL    KM+K    P+IV YN +I G C+
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLK---KMDKAGGRPDIVIYNTIIDGLCK 236

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
              + +A  + +E+  KG+ P+  TY I+                  EMM    +PD+
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 249/510 (48%), Gaps = 42/510 (8%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L    +D    L +F W   +L    S      ++H+L  ++ + +   FL   V+  K 
Sbjct: 107 LLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKD 166

Query: 96  TSVST-IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
              S  +F  L  C++    + ++ DML+ AY++  +   G  +F+R    G   +V++ 
Sbjct: 167 DLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 226

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  L+K    +    VY+EM+R  I  NL +FN + + LCK G   K +  +E M+ 
Sbjct: 227 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 286

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P +VTYN LI+ YC+K   G++  A  ++K M   G++P+ V++  L++G CK+  
Sbjct: 287 EGFDPDIVTYNTLINSYCRK---GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 343

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F  M   G++  +VTYN+LI+G C +GK+ E+ +L  +M+ +G+ P+  T   
Sbjct: 344 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 403

Query: 335 LINGF-----------------------------------CKKKLVEKARVLFDDISEQG 359
           L+ G+                                   C++     A+ L + +S+ G
Sbjct: 404 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDG 463

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P +  YN LI ++C+   + +A  ++  M+D+ + P+++TY  +I  LSR        
Sbjct: 464 HKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGE 523

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +++ E+V +GM   L     L    C++    KA SLL       KE +  +  ++N LI
Sbjct: 524 SLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLS---FFAKEFQIHDTESFNALI 580

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +    KG +  +  + + +L+ GL+PN  T
Sbjct: 581 RITSAKGDIARSLEIQDMMLKMGLLPNPLT 610



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 22/355 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ ++    + G++ +       M  +G  P V+T N L++G  K     + ++   V++
Sbjct: 191 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWE---VYE 247

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   GI PN  TFN L    CKD +     K  E+M   G    +VTYN+LIN  C  G
Sbjct: 248 EMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKG 307

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LD+A  L   M   G+ P++V+  AL+NG CK+  V +A  LF  +  +GLSP ++TYN
Sbjct: 308 RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYN 367

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI  YCKEG+M+++ ++ + M+  G+ PD  T   L+ G  +EG      N++ EL   
Sbjct: 368 TLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRF 427

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+      Y+ L+ ALC++ +   A +LL+   +M K+   P +  YN LIK FCQ   +
Sbjct: 428 GVSISQDIYSYLIVALCRENRPFAAKNLLE---RMSKDGHKPELEIYNELIKSFCQCDCI 484

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIE 527
            +A  L  E+++K + PN  TY+ V                  EM+  G +PD+E
Sbjct: 485 AEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLE 539



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 41/343 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    +++ N L+ +  ++G+ +D  Y+YK M RR +  +L S+  ++NGLCK G++ +A
Sbjct: 288 GFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREA 347

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+SP +VTYN LI GYCK+G   KM ++ ++  DM+ NGI P+  T   L
Sbjct: 348 HQLFHRMVHRGLSPDIVTYNTLIHGYCKEG---KMQESRSLLHDMIWNGISPDSFTCWVL 404

Query: 266 IDGF-----------------------------------CKDENISAAMKVFEEMGSHGI 290
           ++G+                                   C++    AA  + E M   G 
Sbjct: 405 VEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGH 464

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +  YN LI   C    + EA+ L+ EM+   +KPN+ T  A+I    +     +   
Sbjct: 465 KPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGES 524

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L  ++   G+ P +     L   YC+E  ++ A ++ +       + D  ++N LI   S
Sbjct: 525 LVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITS 584

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYN---ILVGALCKDGKS 450
            +G++     I + ++  G+    +T N   IL   L  D K+
Sbjct: 585 AKGDIARSLEIQDMMLKMGLLPNPLTCNPFAILTSRLRVDVKA 627


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 200/363 (55%), Gaps = 9/363 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+  N ++      G+ +    +  +M    +E +  ++N ++ GLC  G+ + A  ++E
Sbjct: 134 VMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLE 190

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           DM   G  P VVTY IL++  CK+ G  +  K   +  +M + G  P+ VT+N +++G C
Sbjct: 191 DMFRRGCLPDVVTYTILLEATCKRSGYKQAMK---LLDEMHDKGCAPDIVTYNVVLNGIC 247

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           ++  +  AM+  + + S+G     V+YN ++ GL    + ++A  L +EM   G  PNVV
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI+  C++ LVE A  + + + + G +P+ ++YN L+ A+CK+ ++  A      M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           + RG  PD+ +YN L+  L R G V+    ++++L + G    L++YN ++  L K GK+
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           K+A+ LLDE   M  +   P+I+TY+ +  G C++ ++E+A     ++ + G+ P    Y
Sbjct: 428 KEALELLDE---MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALY 484

Query: 511 QIV 513
             +
Sbjct: 485 NAI 487



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 208/386 (53%), Gaps = 6/386 (1%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           A +   D  ++    + N L+R L   G+  +   V ++M RR    ++ ++  +L   C
Sbjct: 153 ARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATC 212

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K     +A  ++++M   G +P +VTYN++++G C++   G++  A    K++   G  P
Sbjct: 213 KRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE---GRVEDAMEFLKNLPSYGCEP 269

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N V++N ++ G    E    A K+ EEM   G    VVT+N LI+ LC  G ++ A+ + 
Sbjct: 270 NTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVL 329

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           ++M   G  PN ++ N L++ FCK+K + KA    + +  +G  P +++YNTL+ A C+ 
Sbjct: 330 EQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRN 389

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A  + + + D+G  P + +YN +I GL++ G  +    +++E+ + G++  ++TY
Sbjct: 390 GEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITY 449

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + +   LC++ + ++AV       K++     P    YN ++ G C++ +  +A  L   
Sbjct: 450 STIASGLCREDRIEEAVRTF---CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++  G +PN++TY I+ E +  +G +
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLV 532



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 202/390 (51%), Gaps = 19/390 (4%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+R    G    V++   LL A  K   ++    +  EM  +    ++ ++N VLNG+C+
Sbjct: 193 FRR----GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++  A + ++++ S G  P  V+YNI++ G        +   A+ + ++M   G  PN
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAE---RWEDAEKLMEEMAHKGCPPN 305

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VTFN LI   C+   +  AM+V E+M  +G     ++YN L++  C   K+ +A+   +
Sbjct: 306 VVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M++ G  P++V+ N L+   C+   V+ A  L   + ++G SP +I+YNT+ID   K G
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           + ++A  + + M  +G+ PD+ TY+ + +GL RE  +E       ++ + G+R     YN
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++  LCK  ++  A+ L   M         PN  TY +L++G   +G +++A  L  +L
Sbjct: 486 AILLGLCKRRETHNAIDLFAYMI---SSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             +G         +V +++M+KG I  ++G
Sbjct: 543 CSRG---------VVNKKLMKKGSIKMLDG 563



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 188/401 (46%), Gaps = 40/401 (9%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV------LNGLCKAGK 201
           K+S  S  + LR LV+ G+ +D   +   +      LN  S   V      +  LC +G+
Sbjct: 64  KASSASATERLRVLVRRGELDDALRLVDSLA----GLNPPSPAAVGPCAALIKKLCASGR 119

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
              A  ++         P V+ YN ++ GYC   G G++  A  +  DM    + P+  T
Sbjct: 120 TADARRVLA-----ASGPDVMVYNAMVAGYC---GAGQLDAARRLVADM---PVEPDAYT 168

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NTLI G C     S A+ V E+M   G    VVTY  L+   C      +A+ L DEM 
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  P++VT N ++NG C++  VE A     ++   G  P+ ++YN ++       R E
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M  +G  P+V T+N LI+ L R G VE    ++ ++   G     ++YN L+
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            A CK  K  KA+  ++ M        +P+IV+YN L+   C+ G+++ A  LL++L +K
Sbjct: 349 HAFCKQKKIHKAMEFVELMV---SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK 405

Query: 502 GLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           G  P   +Y  V                 +EM  KG  PDI
Sbjct: 406 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 166/296 (56%), Gaps = 3/296 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    YG + + +S N +L+ L    ++ED E + +EM  +    N+ +FN +++
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A +++E M   G +P  ++YN L+  +CK+    K++KA    + MV  G
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQ---KKIHKAMEFVELMVSRG 371

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C++  +  A+++  ++   G +  +++YN++I+GL   GK  EA+
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L DEM + GL+P+++T + + +G C++  +E+A   F  + + G+ P+   YN ++   
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           CK     +A  +   M+  G +P+ STY  L+ GL+ EG V+  R +  +L + G+
Sbjct: 492 CKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 3/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E  ++   YG   + LS N LL A  K+ K        
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M  R    ++ S+N +L  LC+ G+++ A +++  +K  G SP +++YN +IDG  K 
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +M   G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 425 ---GKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             YN+++ GLC   +   A+ L   M++SG  PN  T   L+ G   + LV++AR LF  
Sbjct: 482 ALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541

Query: 355 ISEQGL 360
           +  +G+
Sbjct: 542 LCSRGV 547



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 25/203 (12%)

Query: 345 VEKARVL-----FDDI-----SEQGLSP----SVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            E+ RVL      DD      S  GL+P    +V     LI   C  GR  DA   R  +
Sbjct: 71  TERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADA---RRVL 127

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  PDV  YN ++AG    G ++  R ++ ++    +     TYN L+  LC  G++
Sbjct: 128 AASG--PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRT 182

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A+++L++MF+       P++VTY +L++  C++   + A  LL+E+ +KG  P+  TY
Sbjct: 183 SNALAVLEDMFR---RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
            +V   + ++G + D    + N+
Sbjct: 240 NVVLNGICQEGRVEDAMEFLKNL 262


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 41/436 (9%)

Query: 139 FKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            +R G D     +  S N ++  + + G+  D   V+ EM  R +  N  ++N +++G  
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K G L     + + M   G+ P  +TYN+L+ G C+ G   +M +  A+  +M    ++P
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG---RMGETSALLDEMASQKMVP 303

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T++ L DG  ++ +  A + +F +   +G+  G  T + L+NGLC DGK+  A  + 
Sbjct: 304 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 363

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++ +GL P  V  N LING+C+   +E A   F  +  + + P  ITYN LI+  CK 
Sbjct: 364 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 423

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ +A  +   M D GV P V T+N LI    R G +E    +++E+  NG++  +V+Y
Sbjct: 424 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 483

Query: 438 NILVGALCKDGKSKKAVSLLDEMF--------------------------------KMEK 465
             +V A CK+GK  +AV++LD+MF                                KM+ 
Sbjct: 484 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 543

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP- 524
               P+IVTYN+LIKG C + ++ +A  ++N L    LIP+  +Y  +      +G I  
Sbjct: 544 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 603

Query: 525 --DIEG--HMYNISGT 536
             D++   H Y I  T
Sbjct: 604 ALDLQQRMHKYGIKST 619



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 41/442 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  ++K      GF    +   +GLK + ++ N LL  L + G+  +   + 
Sbjct: 234 NHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 293

Query: 175 KEMKRRR--------------IELNLDS---------------------FNFVLNGLCKA 199
            EM  ++              +  N DS                      + +LNGLCK 
Sbjct: 294 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKD 353

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK++ A ++++ + + G+ P  V YN LI+GYC+    G++  A + F  M    I P+ 
Sbjct: 354 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ---TGELEGAFSTFGQMKSRHIKPDH 410

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+N LI+G CK E I+ A  +  EM  +G+   V T+N+LI+     G+L++   +  E
Sbjct: 411 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GLKPNVV+  +++N FCK   + +A  + DD+  + + P+   YN +IDAY + G 
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            + AF +   M   G+ P + TYN LI GL  +  +     I+N L N+ +    V+YN 
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ A C  G   KA   LD   +M K      + TY+ LI G    G+L +   L  +++
Sbjct: 591 LISACCYRGNIDKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647

Query: 500 EKGLIPNQTTYQIVREEMMEKG 521
           +  ++P+   + I+ E   + G
Sbjct: 648 QNNVVPSNAIHNIMVEAYSKYG 669



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 16/404 (3%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMF---VKNGKFTSVSTIFHAL----STCSDSLCRNSII 118
           T  LL  +   K  P   ++  +F    +NG   ++ ++F        T  D  C  SI+
Sbjct: 289 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC--SIL 346

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ L     K+ K  +  E  +   + GL  + +  N L+    + G+ E     + +MK
Sbjct: 347 LNGL----CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 402

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R I+ +  ++N ++NGLCKA ++  A D++ +M+  GV+P V T+N LID Y   G  G
Sbjct: 403 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAY---GRTG 459

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ K   V  +M ENG+ PN V++ ++++ FCK+  I  A+ + ++M    +      YN
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           ++I+     G  D+A  L ++M ++G+ P++VT N LI G C +  + +A  + + +S  
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 579

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            L P  ++YNTLI A C  G ++ A  ++  M   G+   V TY+ LI+GL   G +  +
Sbjct: 580 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 639

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             +  +++ N +      +NI+V A  K G   KA  L  EM +
Sbjct: 640 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 27/334 (8%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP-NEVTFNTLIDGFC 270
           + S G  P    +N  +      G +G+   A  + + M  +G  P N  ++N +I G  
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGE---AVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +      A++VF+EM    +    +TYN++I+G    G L+    LRD+M+  GLKPN +
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L++G C+   + +   L D+++ Q + P   TY+ L D   + G  +   ++    
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 391 LDRGVLPDVSTYNC--LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           L  GV   +  Y C  L+ GL ++G V     ++  LVN G+    V YN L+   C+ G
Sbjct: 332 LKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 389

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           + + A S   +   M+     P+ +TYN LI G C+  ++ +A  LL E+ + G+ P   
Sbjct: 390 ELEGAFSTFGQ---MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 446

Query: 509 TYQ----------------IVREEMMEKGFIPDI 526
           T+                 IV  EM E G  P++
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 9/369 (2%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           L L G+ L + V    Y      L+   K+GK +    +  +L      L    +I + L
Sbjct: 325 LSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAG--LVPTRVIYNTL 381

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  Y +  +    F  F +     +K   ++ N L+  L K  +  + + +  EM+   +
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
              +++FN +++   + G+L K   ++ +M+  G+ P VV+Y  +++ +CK    GK+ +
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN---GKIPE 498

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+  DM    +LPN   +N +ID + +      A  + E+M S+GI+  +VTYN LI 
Sbjct: 499 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 558

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   ++ EA  + + +    L P+ V+ N LI+  C +  ++KA  L   + + G+  
Sbjct: 559 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 618

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN---VEGVR 419
           +V TY+ LI      GR+ +   +   M+   V+P  + +N ++   S+ GN    E +R
Sbjct: 619 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 678

Query: 420 NIMNELVNN 428
             M +  NN
Sbjct: 679 KEMLQKRNN 687



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 41/217 (18%)

Query: 343 KLVEKARVLFDDISEQGLSP--SVITYNTLIDAYCKEGRMED---AFA------------ 385
           +L + A  L  D++++  +P  S+ + N L++A    GR  D   AF             
Sbjct: 106 RLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTF 165

Query: 386 ---------------------MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
                                +R    D    P+  +YN +IAG+ R G       + +E
Sbjct: 166 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 225

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +    +TYN ++    K G  +    L D+M     +   PN +TYNVL+ G C+
Sbjct: 226 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK---PNAITYNVLLSGLCR 282

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G++ + + LL+E+  + ++P+  TY I+ + +   G
Sbjct: 283 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 319


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 230/441 (52%), Gaps = 9/441 (2%)

Query: 82  IRSFLHMFVKNGKFT-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           +RSF+  + +  +F  +V  + + L+T    +  ++ + + L+    +  +  L    + 
Sbjct: 127 VRSFVESYARLRRFDDAVDLVRNQLNTFG--VQADTAVYNHLLNVLAEGSRMKLLESVYN 184

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
              D G++  V++ N L++AL +  +      + +EM    +  +  +F  ++ G  + G
Sbjct: 185 EMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEG 244

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            +  A  +   M   G SP  VT N+LI+GYCK   +G++  A    +  + +G  P++V
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCK---MGRVEDALGYIQKEIADGFEPDQV 301

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+NT +   C++ ++S A+KV + M   G    V TYN++IN L  +G+LDEA  + ++M
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G  P+  T N LI   C +  +E+A  L  +++ +GLSP V T+N LI+A CK G  
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
                +   M   G  PD  TYN LI  L   G +    +++ E+ +NG     VTYN +
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + ALCK  + ++A  + D+   M+      + VT+N LI G C+  +++DA  L+ ++++
Sbjct: 482 IDALCKQMRIEEAEEVFDQ---MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
           +GL P+  TY  +     ++G
Sbjct: 539 EGLQPSNITYNSILTHYCKQG 559



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 234/474 (49%), Gaps = 27/474 (5%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS-IIIDMLMLAYVK 128
           + S  VA       + +  F++ G   S+       +   ++ C  + + +++L+  Y K
Sbjct: 221 MSSHAVAPDETTFTTLMQGFIEEG---SIEAALRVKTKMMETGCSPTRVTVNVLINGYCK 277

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             +        ++    G +   ++ N  +  L + G       V   M +   + ++ +
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N V+N L K G+L++A  I+  M   G  P   T+N LI   C +    ++ +A  + +
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN---RLEEALDLAR 394

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           ++   G+ P+  TFN LI+  CK  +    +++FEEM S G A   VTYN LI+ LC  G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           KL  A+ L  EM ++G   + VT N +I+  CK+  +E+A  +FD +   G+S S +T+N
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CK  R++DA  +   M+  G+ P   TYN ++    ++G+++   +I+  +  N
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G    +VTY  L+  LCK G+++ A+ LL  M +++  +  P    YN +I+   ++  L
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGM-RIKGIRPTPK--AYNPVIQSLFRRNNL 631

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVRE-----------------EMMEKGFIPD 525
            DA  L  E+ E G  P+  TY+IV                   EM+ KGF+P+
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 194/363 (53%), Gaps = 7/363 (1%)

Query: 166 KFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           +F+D V+ V  ++    ++ +   +N +LN L +  ++     +  +M   G+ P VVT 
Sbjct: 139 RFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTL 198

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LI   C+     ++  A  + ++M  + + P+E TF TL+ GF ++ +I AA++V  +
Sbjct: 199 NTLIKALCRAH---QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G +   VT N LING C  G++++A+    + +A G +P+ VT N  ++  C+   
Sbjct: 256 MMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGH 315

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V  A  + D + ++G  P V TYNT+I+   K G +++A  + N M+DRG LPD +T+N 
Sbjct: 316 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 375

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI  L  +  +E   ++  EL   G+   + T+NIL+ ALCK G     + L +EM   +
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM---K 432

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
                P+ VTYN+LI   C  GKL +A  LL E+   G   +  TY  + + + ++  I 
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492

Query: 525 DIE 527
           + E
Sbjct: 493 EAE 495



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 151/291 (51%), Gaps = 4/291 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++L+ A  K   PHLG   F+     G     ++ N L+  L   GK  +   + KEM+ 
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                +  ++N +++ LCK  ++ +A ++ + M + G+S   VT+N LIDG CK   I  
Sbjct: 469 NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
              A  + + MV+ G+ P+ +T+N+++  +CK  ++  A  + E M ++G    VVTY +
Sbjct: 529 ---ATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LINGLC  G+   A+ L   M   G++P     N +I    ++  +  A  LF +++E G
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645

Query: 360 LSPSVITYNTLIDAYCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             P  +TY  +    C+ G  +++AF     M+++G +P+ S++  L  GL
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 20/259 (7%)

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL-RDEMMASGLKPNVVTSNALINGFCKK 342
           EM   G  AG     S +       + D+AV L R+++   G++ +    N L+N   + 
Sbjct: 114 EMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEG 173

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++    ++++++++G+ P V+T NTLI A C+  ++  A  M   M    V PD +T+
Sbjct: 174 SRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTF 233

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ G   EG++E    +  +++  G     VT N+L+   CK G+ + A+  + +   
Sbjct: 234 TTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIA 293

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
              E   P+ VTYN  +   CQ G +  A  +++ +L++G  P+  TY  V         
Sbjct: 294 DGFE---PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 514 -------REEMMEKGFIPD 525
                    +M+++G +PD
Sbjct: 351 LDEAKGIVNQMVDRGCLPD 369


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 221/425 (52%), Gaps = 35/425 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F    D G+  + ++ N ++   VK G  E    +  +M     + N+ ++N +L+
Sbjct: 213 ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI-- 237
           GLC+AG++++   +M++M S  + P   TY+IL DG  + G               G+  
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GK+ KA+ V + +V  G++P  V +NTLI+G+C+  ++  A  +F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M S  I    +TYN+LINGLC    + +A  L  EM  SG+ P+V T N LI+ +   
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +EK   +  D+ ++G+   VI++ +++ A+CK G++ +A A+ + M+ + V P+   Y
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I      G+ E    ++ ++ N+G+ A +VTYN+L+  LC+  +  +A  L+   + 
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI---YT 569

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           +  +   P++V+YN +I   C KG  + A  LL E+ + G+ P   TY  +   +   G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 629

Query: 523 IPDIE 527
           + D+E
Sbjct: 630 VHDME 634



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 204/409 (49%), Gaps = 43/409 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+ SCN LL +L+  G+  DV   +  +       +  ++N V+     AG L+ A  ++
Sbjct: 121 SLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMV 180

Query: 210 EDM-KSLGVSPK-VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             M +S G  P    +YN++I G  + G   K   A  VF +MV+ G++PN +T+NT+ID
Sbjct: 181 RRMGRSEGAPPPDAFSYNVVIAGLWRSG---KGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G  K  ++ A  ++ ++M   G    +VTYN L++GLC  G++DE   L DEM +  + P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 297

Query: 328 N-----------------------------------VVTSNALINGFCKKKLVEKARVLF 352
           +                                     T + L+NG CK   V KA  + 
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 357

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + +   GL P+ + YNTLI+ YC+   +  AF +   M  R + PD  TYN LI GL + 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             V    +++ E+  +G+   + T+N L+ A    G+ +K  ++L +   M+++    ++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD---MQQKGIKSDV 474

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +++  ++K FC+ GK+ +A  +L++++ K + PN   Y  + +  +E G
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 523



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 193/383 (50%), Gaps = 6/383 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             S N ++  L + GK  D   V+ EM    +  N  ++N +++G  K G L     + +
Sbjct: 194 AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 253

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G  P +VTYN+L+ G C+ G   +M +   +  +M  + + P+  T++ L DG  
Sbjct: 254 QMLHDGPKPNIVTYNVLLSGLCRAG---RMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +       + +F E    G+  G  T + L+NGLC DGK+ +A  + + ++ +GL P  V
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 370

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N LING+C+ + +  A  +F+ +  + + P  ITYN LI+  CK   +  A  +   M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              GV P V T+N LI      G +E    +++++   G+++ ++++  +V A CK+GK 
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +AV++LD+M   +     PN   YN +I  + + G  E A  L+ ++   G+  +  TY
Sbjct: 491 PEAVAILDDMIYKDVA---PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 547

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
            ++ + +     I + E  +Y +
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTL 570



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 187/363 (51%), Gaps = 6/363 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     +C+ LL  L K+GK    E V + +    +      +N ++NG C+   L  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I E MKS  + P  +TYN LI+G CK   +  + KA+ +  +M ++G+ P+  TFNTL
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCK---LEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +     +     V  +M   GI + V+++ S++   C +GK+ EAVA+ D+M+   +
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN    N++I+ + +    E+A +L + +   G+S S++TYN L+   C+  ++++A  
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  ++ ++G+ PDV +YN +I+    +G+ +    ++ E+   G+R  L TY+ LV AL 
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALA 625

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+      L  +M     E   P+   Y +++  + +         L  E+ EKG+  
Sbjct: 626 SAGRVHDMECLYQQMLHKNVE---PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 682

Query: 506 NQT 508
           + T
Sbjct: 683 DDT 685



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 174/346 (50%), Gaps = 5/346 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+   K+GK      +   L      L   ++I + L+  Y +       F  F++   
Sbjct: 340 LLNGLCKDGKVAKAEQVLEML--VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
             ++   ++ N L+  L K       E +  EM++  ++ ++++FN +++    AG+L K
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++ DM+  G+   V+++  ++  +CK    GK+ +A A+  DM+   + PN   +N+
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKN---GKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID + +  +   A  + E+M + G++A +VTYN L+ GLC   ++DEA  L   +   G
Sbjct: 515 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P+VV+ N +I+  C K   +KA  L  ++++ G+ P++ TY+TL+ A    GR+ D  
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            +   ML + V P  S Y  ++    R  N   V ++  E+   G+
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 40/197 (20%)

Query: 362 PSVITYNTLIDAYCKEGRMED-----------------------------------AFAM 386
           PS+ + N L+++    GR  D                                   A AM
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 387 --RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
             R    +    PD  +YN +IAGL R G       + +E+V+ G+    +TYN ++   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G  +    L D+M     +   PNIVTYNVL+ G C+ G++++   L++E+    + 
Sbjct: 240 VKGGDLEAGFRLRDQML---HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 296

Query: 505 PNQTTYQIVREEMMEKG 521
           P+  TY I+ + +   G
Sbjct: 297 PDGFTYSILFDGLTRTG 313


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 222/434 (51%), Gaps = 28/434 (6%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SIIID L     K+      F  F      G K+ ++    L+R     G+++D   + +
Sbjct: 251 SIIIDGL----CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M +R+I  ++ +F+ +++   K GKL +A ++ ++M   G+SP  VTY  LIDG+CK+ 
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
              ++ KA+ +   MV  G  PN  TFN LI+G+CK   I   +++F +M   G+ A  V
Sbjct: 367 ---QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN+LI G C  GKL+ A  L  EM++  ++P++V+   L++G C     EKA  +F+ I
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +  +   +  YN +I   C   +++DA+ +  S+  +GV PDV TYN +I GL ++G++
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE---------------- 459
                +  ++  +G      TYNIL+ A   +G + K+  L++E                
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603

Query: 460 ---MFKMEKEKKWPNIVTYNVLIKGFC--QKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
              + +M K    P++ T+  L++ FC  +   + DA  L   +   G  PN  TY  V 
Sbjct: 604 LSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVI 663

Query: 515 EEMMEKGFIPDIEG 528
           + ++    I  + G
Sbjct: 664 KGLLNGNMISQVPG 677



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 202/387 (52%), Gaps = 6/387 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E   R  + G K ++++ N L+  L   GK  D   +   M     + N  ++  VL 
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            +CK+G+   A +++  M+   +    V Y+I+IDG CK G +   +    +F +M   G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN---LFNEMEIKG 277

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              + + + TLI GFC         K+  +M    I   VV +++LI+    +GKL EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P+ VT  +LI+GFCK+  ++KA  + D +  +G  P++ T+N LI+ Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++D   +   M  RGV+ D  TYN LI G    G +E  + +  E+V+  +R  +
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V+Y IL+  LC +G+ +KA+ + +   K+EK K   +I  YN++I G C   K++DA  L
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKG 521
              L  KG+ P+  TY I+   + +KG
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKG 541



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 216/425 (50%), Gaps = 46/425 (10%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G + + ++   +L+ + K G+      + ++M+ R+I+L+   ++ +++GLCK G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            L+ A ++  +M+  G    ++ Y  LI G+C  G   +      + +DM++  I P+ V
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG---RWDDGAKLLRDMIKRKITPDVV 318

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            F+ LID F K+  +  A ++ +EM   GI+   VTY SLI+G C + +LD+A  + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++ G  PN+ T N LING+CK  L++    LF  +S +G+    +TYNTLI  +C+ G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------------GVRNIM 422
           E A  +   M+ R V PD+ +Y  L+ GL   G  E                  G+ NI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 423 NELVNN-----------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KME 464
              + N                 G++  + TYNI++G LCK G   +A    D +F KME
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA----DLLFRKME 554

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE---EMMEKG 521
           ++   PN  TYN+LI+    +G    +  L+ E+   G   + +T +        M++ G
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAG 614

Query: 522 FIPDI 526
             PD+
Sbjct: 615 HEPDV 619



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 204/413 (49%), Gaps = 49/413 (11%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  ++  ++L   + +  +++ V  + K+M+ + I  NL + + ++N  C+  KL+ A  
Sbjct: 69  RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            M  +  LG  P  VT++ LI+G C +G   ++ +A  +   MVE G  P  +T N L++
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEG---RVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 268 GF-----------------------------------CKDENISAAMKVFEEMGSHGIAA 292
           G                                    CK    + AM++  +M    I  
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
             V Y+ +I+GLC DG LD A  L +EM   G K +++    LI GFC     +    L 
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            D+ ++ ++P V+ ++ LID + KEG++ +A  +   M+ RG+ PD  TY  LI G  +E
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD---EMF-KMEKEKK 468
             ++   ++++ +V+ G    + T+NIL+   CK        +L+D   E+F KM     
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK-------ANLIDDGLELFRKMSLRGV 418

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             + VTYN LI+GFC+ GKLE A  L  E++ + + P+  +Y+I+ + + + G
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 190/398 (47%), Gaps = 65/398 (16%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +   V++ + L+   VKEGK  + E ++KEM +R I  +  ++  +++G CK  +L+KA+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M S G  P + T+NILI+GYCK   I    +   +F+ M   G++ + VT+NTLI
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE---LFRKMSLRGVVADTVTYNTLI 429

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG------------------ 308
            GFC+   +  A ++F+EM S  +   +V+Y  L++GLC +G                  
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 309 -----------------KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
                            K+D+A  L   +   G+KP+V T N +I G CKK  + +A +L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRME----------------DAFAMRNS------ 389
           F  + E G SP+  TYN LI A+  EG                   DA  +R +      
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           ML  G  PDV T+  L+     E N  V     +   +   G +  +VTYN ++  L   
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
               +   +LD+MF+   +   PN VT +  I G C++
Sbjct: 670 NMISQVPGVLDQMFERGCQ---PNAVTKSTFISGLCKQ 704



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 12/313 (3%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
           K + A D+ ++M      P+++ ++ L         + +  + D V    K M   GI  
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLF------SVVARTKQYDLVLDLCKQMELKGIAH 105

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T + +I+  C+   +S A     ++   G     VT+++LINGLC++G++ EA+ L 
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D M+  G KP ++T NAL+NG C    V  A +L D + E G  P+ +TY  ++   CK 
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G+   A  +   M +R +  D   Y+ +I GL ++G+++   N+ NE+   G +A ++ Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+   C  G+      LL +M    K K  P++V ++ LI  F ++GKL +A  L  E
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMI---KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342

Query: 498 LLEKGLIPNQTTY 510
           ++++G+ P+  TY
Sbjct: 343 MIQRGISPDTVTY 355



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 41/356 (11%)

Query: 50  FCWSTKELRASHSLLLTGRLLHSLVVAKKY-PKIRSF---LHMFVKNGKFTSVSTIFHAL 105
           FC   +  +A+H L         L+V+K   P IR+F   ++ + K         +F  +
Sbjct: 362 FCKENQLDKANHML--------DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S     +  +++  + L+  + +  K  +  E F+      ++  ++S   LL  L   G
Sbjct: 414 SL--RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           + E    +++++++ ++EL++  +N +++G+C A K++ A D+   +   GV P V TYN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I+I G CKKG + +   AD +F+ M E+G  PN  T+N LI     + + + + K+ EE+
Sbjct: 532 IMIGGLCKKGSLSE---ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588

Query: 286 GSHGIA------------------AG----VVTYNSLINGLCVD--GKLDEAVALRDEMM 321
              G +                  AG    V T+ +L+   C++    + +A  L   M 
Sbjct: 589 KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMK 648

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           A G KPNVVT N +I G     ++ +   + D + E+G  P+ +T +T I   CK+
Sbjct: 649 AMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 23/290 (7%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +  F + GK      +F  +   S  +  + +   +L+     N +P    E F++  
Sbjct: 427 TLIQGFCELGKLEVAKELFQEM--VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              ++  +   N ++  +    K +D   ++  +  + ++ ++ ++N ++ GLCK G L+
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-------------------AD 244
           +A  +   M+  G SP   TYNILI  +  +G   K  K                   A 
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFAL 604

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISA--AMKVFEEMGSHGIAAGVVTYNSLIN 302
           +    M++ G  P+  TF TL+  FC +EN S   A  +F+ M + G    VVTYN++I 
Sbjct: 605 STLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIK 664

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           GL     + +   + D+M   G +PN VT +  I+G CK+ L   A +L 
Sbjct: 665 GLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLL 714



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 3/229 (1%)

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           G V+Y   +    VD K D+AV L  EM  S  +P ++  + L +   + K  +    L 
Sbjct: 36  GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             +  +G++ ++ T + +I+  C+  ++  AF+    ++  G  PD  T++ LI GL  E
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G V     +++ +V  G +  L+T N LV  LC +GK   AV L+D M +   +   PN 
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ---PNE 212

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           VTY  ++K  C+ G+   A  LL ++ E+ +  +   Y I+ + + + G
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 256/551 (46%), Gaps = 51/551 (9%)

Query: 3   CSANSTIEDITELIRNHHW---------SKLKNTDPNTVILQLFNSDADPVLILRYFCWS 53
           C      + +  ++   HW         S L +T  N V+L L  S     +   +F W 
Sbjct: 8   CGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNL--SLDGCCVSWAFFKWV 65

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
              L   HSL  +  ++H+L   K++   ++ L         +S S + +A+    D   
Sbjct: 66  ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPS-VLNAVVRIHDDPD 124

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
            NS I+  L++ Y  +       + F+    +G K  + +C  LL +L K      V  V
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 184

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           YK+M R  +  N+  FN +++  CK+G + KA  ++ +M+S  + P + TYN LI  YCK
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244

Query: 234 KG------GI--------------------------GKMYKADAVFKDMVENGILPNEVT 261
           KG      GI                          G+M +A  +F+++  NG  PN VT
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVT 302

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + TLIDG+C+  ++  A+++ E M   G+  GVVTYNS++  LC +GK+ +A  L +EM 
Sbjct: 303 YTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMS 362

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              ++P+ VT N LIN +CK   +  A  +   + E GL P   T+  LI  +CK   ++
Sbjct: 363 ERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVD 422

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A      MLD G  P  STY+ L+     + N E V  + +EL   G+   +  Y  L+
Sbjct: 423 SAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALI 482

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK  K + A    + +F + + K    + V Y  L   + + GK   A+ +L+E+ +
Sbjct: 483 RRLCKIDKIESA----ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 538

Query: 501 KGLIPNQTTYQ 511
           + L+     Y+
Sbjct: 539 RRLMITLKIYR 549



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +L  LC+ GK+  A+ ++ +M    V P  VT N LI+ YCK G +G   K   V 
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK---VK 393

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M+E G+ P++ TF  LI GFCK   + +A +   EM   G +    TY+ L++     
Sbjct: 394 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQ 453

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
              +  + L DE+   GL  ++    ALI   CK   +E A  +F  +  +G+    + Y
Sbjct: 454 DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVY 513

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            +L  AY K G+   A  M + M  R ++  +  Y C  A  + +G++ G+
Sbjct: 514 TSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGL 564



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A+ + + M   G KP++     L+N   K +L      ++  +   G+ P++  +N L
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I A CK G +E A  + N M  R + PD+ TYN LI+   ++G       I + +   G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTYN L+   C++G+ ++A+ L  E+         PN VTY  LI G+C+   LE+
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI-----NGATPNHVTYTTLIDGYCRVNDLEE 318

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L   +  +GL P   TY  +  ++ E+G I D
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N +LR L +EGK +D   +  EM  R++E +  + N ++N  CK G +  A
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   G+ P   T+  LI G+CK   + ++  A     +M++ G  P+  T++ L
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCK---LHEVDSAKEFLFEMLDAGFSPSYSTYSWL 446

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D +   +N  A +++ +E+   G+   +  Y +LI  LC   K++ A  +   M   G+
Sbjct: 447 VDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 506

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           K + V   +L   + K      A  + D++ ++ L  ++  Y     +Y  +G +   F
Sbjct: 507 KGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 565


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 221/425 (52%), Gaps = 35/425 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F    D G+  + ++ N ++   VK G  E    +  +M     + N+ ++N +L+
Sbjct: 35  ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 94

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI-- 237
           GLC+AG++++   +M++M S  + P   TY+IL DG  + G               G+  
Sbjct: 95  GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 154

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GK+ KA+ V + +V  G++P  V +NTLI+G+C+  ++  A  +F
Sbjct: 155 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 214

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M S  I    +TYN+LINGLC    + +A  L  EM  SG+ P+V T N LI+ +   
Sbjct: 215 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 274

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +EK   +  D+ ++G+   VI++ +++ A+CK G++ +A A+ + M+ + V P+   Y
Sbjct: 275 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 334

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I      G+ E    ++ ++ N+G+ A +VTYN+L+  LC+  +  +A  L+   + 
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI---YT 391

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           +  +   P++V+YN +I   C KG  + A  LL E+ + G+ P   TY  +   +   G 
Sbjct: 392 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 451

Query: 523 IPDIE 527
           + D+E
Sbjct: 452 VHDME 456



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 187/363 (51%), Gaps = 6/363 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     +C+ LL  L K+GK    E V + +    +      +N ++NG C+   L  A
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 210

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I E MKS  + P  +TYN LI+G CK   +  + KA+ +  +M ++G+ P+  TFNTL
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLCK---LEMVTKAEDLVMEMEKSGVDPSVETFNTL 267

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +     +     V  +M   GI + V+++ S++   C +GK+ EAVA+ D+M+   +
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN    N++I+ + +    E+A +L + +   G+S S++TYN L+   C+  ++++A  
Sbjct: 328 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 387

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  ++ ++G+ PDV +YN +I+    +G+ +    ++ E+   G+R  L TY+ LV AL 
Sbjct: 388 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALA 447

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+      L  +M     E   P+   Y +++  + +         L  E+ EKG+  
Sbjct: 448 SAGRVHDMECLYQQMLHKNVE---PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 504

Query: 506 NQT 508
           + T
Sbjct: 505 DDT 507



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 171/338 (50%), Gaps = 41/338 (12%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P   +YN++I G  + G   K   A  VF +MV+ G++PN +T+NT+IDG  K  ++ A 
Sbjct: 14  PDAFSYNVVIAGLWRSG---KGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG 70

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN---------- 328
            ++ ++M   G    +VTYN L++GLC  G++DE   L DEM +  + P+          
Sbjct: 71  FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130

Query: 329 -------------------------VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
                                      T + L+NG CK   V KA  + + +   GL P+
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            + YNTLI+ YC+   +  AF +   M  R + PD  TYN LI GL +   V    +++ 
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 250

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+  +G+   + T+N L+ A    G+ +K  ++L +   M+++    +++++  ++K FC
Sbjct: 251 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD---MQQKGIKSDVISFGSVVKAFC 307

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + GK+ +A  +L++++ K + PN   Y  + +  +E G
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 345



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 174/346 (50%), Gaps = 5/346 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+   K+GK      +   L      L   ++I + L+  Y +       F  F++   
Sbjct: 162 LLNGLCKDGKVAKAEQVLEML--VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 219

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
             ++   ++ N L+  L K       E +  EM++  ++ ++++FN +++    AG+L K
Sbjct: 220 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 279

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++ DM+  G+   V+++  ++  +CK    GK+ +A A+  DM+   + PN   +N+
Sbjct: 280 CFTVLSDMQQKGIKSDVISFGSVVKAFCKN---GKIPEAVAILDDMIYKDVAPNAQVYNS 336

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID + +  +   A  + E+M + G++A +VTYN L+ GLC   ++DEA  L   +   G
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P+VV+ N +I+  C K   +KA  L  ++++ G+ P++ TY+TL+ A    GR+ D  
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            +   ML + V P  S Y  ++    R  N   V ++  E+   G+
Sbjct: 457 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 3/172 (1%)

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           SE    P   +YN +I    + G+  DA  + + M+D GV+P+  TYN +I G  + G++
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E    + ++++++G +  +VTYN+L+  LC+ G+  +   L+DE   M     +P+  TY
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDE---MASHSMFPDGFTY 124

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           ++L  G  + G+      L  E L+KG++    T  I+   + + G +   E
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 176


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 199/373 (53%), Gaps = 6/373 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A++I+
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M S G+ P VV YN ++ G C      +  +A+ +  +M +     ++VTFN L+D F
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAE---RWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C++  +   +++ E+M SHG    V+TY ++ING C +G +DEAV L   M + G KPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+   ++ G C       A  L   + +QG  P+ +T+NTLI+  CK+G +E A  +   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML  G  PD+ +Y+ +I GL + G  E    ++N +VN G+    + Y+ +  AL ++G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             K + + D    ++      + V YN +I   C++ + + A      ++  G +PN++T
Sbjct: 547 VNKVIQMFD---NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 510 YQIVREEMMEKGF 522
           Y ++ + +  +G 
Sbjct: 604 YTMLIKGLASEGL 616



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDYGLKSSVL-------------SCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R+G +     VL             +CN +L A+ ++G  ++   + +++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++M++M  +  +P +VT+N LI   C+ G   +
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   M E+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 270 VHE---VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++ GLC   +  EA  L  EM       + VT N L++ FC+  LV++   L + +   G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL   G      
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +M++++  G     VT+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 503

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK E+A  LLN ++ KG+ PN   Y  +   +  +G +  +     NI  T+
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 220/434 (50%), Gaps = 24/434 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +L  L +AK++  +   +   V+     ++ T     +T    LCRN +   +       
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT----FNTLIGYLCRNGLFERV------- 270

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                   E   +  ++G    +     ++  + KEG  E    +   M    ++ N+  
Sbjct: 271 -------HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N VL GLC A +  +A +++ +M         VT+NIL+D +C+ G + ++ +   + +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---LLE 380

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G +P+ +T+ T+I+GFCK+  I  A+ + + M S G     V+Y  ++ GLC  G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +  +A  L  +M+  G  PN VT N LIN  CKK LVE+A  L   +   G SP +I+Y+
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+ID   K G+ E+A  + N M+++G+ P+   Y+ +   LSREG V  V  + + + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +R+  V YN ++ +LCK  ++ +A+   D    M      PN  TY +LIKG   +G  
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAI---DFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 489 EDANGLLNELLEKG 502
           ++A  LL+EL  +G
Sbjct: 618 KEAQELLSELCSRG 631



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F  V+ GLC  G++  A +++++M   G +P    Y+++++  C+ GG     +  
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR-- 167

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V + M   G   +    N +++  C+   +  A+ +  ++   G  A +V+YN+++ GL
Sbjct: 168 -VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+  +  +   L DEM+     PN+VT N LI   C+  L E+   +   +SE G +P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             Y T+ID  CKEG +E A  + N M   G+ P+V  YN ++ GL      +    +++E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +         VT+NILV   C++G   + + LL++M         P+++TY  +I GFC+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML---SHGCMPDVITYTTVINGFCK 403

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +G +++A  LL  +   G  PN  +Y IV + +   G   D E  M
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 211/439 (48%), Gaps = 45/439 (10%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   +S   C+  +   + IID   
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID--- 294

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N +L+ L    ++++ E +  EM ++   
Sbjct: 295 -GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------ 237
           L+  +FN +++  C+ G +++  +++E M S G  P V+TY  +I+G+CK+G I      
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 238 --------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
                                     G+   A+ +   M++ G  PN VTFNTLI+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A+++ ++M  +G +  +++Y+++I+GL   GK +EA+ L + M+  G+ PN + 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            +++     ++  V K   +FD+I +  +    + YN +I + CK    + A      M+
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDGKS 450
             G +P+ STY  LI GL+ EG  +  + +++EL + G +R  L+ +  +     ++GK 
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQ 653

Query: 451 K---KAVSLLDEMFKMEKE 466
           K      S +D  +K+  E
Sbjct: 654 KCEENLTSAVDNNYKLPIE 672



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-- 245
           ++N ++ G C+AG+L  A  +   +    V P   T+  ++ G C +G I     ADA  
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRI-----ADALE 132

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V  +M   G  P    ++ +++  C+      +++V E M + G        N ++N +C
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +DEAV L  ++   G + ++V+ NA++ G C  K       L D++     +P+++
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+NTLI   C+ G  E    +   M + G  PD+  Y  +I G+ +EG++E    I+N +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G++  +V YN ++  LC   + K+A  LL EMF    +K  P + VT+N+L+  FCQ
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFNILVDFFCQ 368

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            G ++    LL ++L  G +P+  TY  V     ++G I
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 232/513 (45%), Gaps = 67/513 (13%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P L  R+F W+T+  R S    +T    H+LV+            M  K+  F +   I 
Sbjct: 77  PELGFRFFIWTTR--RRSFRSWVT----HNLVI-----------DMLAKDDGFDTYWKIL 119

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             L   +  +   +  +  L+ AY K+       E+F +  D+G K  V + N +L  +V
Sbjct: 120 EELKNSNIQIPPPTFSV--LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           ++  F     VY +M +     N  +F  +LNGLCK GK + A  + ++M   G+ P  +
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            Y I++ G C+      +++   +   M  +G  P+ +T N L+DGFCK   I  A  + 
Sbjct: 238 IYTIILSGLCQAKRTDDVHR---LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALL 294

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +     G   G+  Y+SLI+GL    + DE      +M  +G++P+VV    LI GFC+ 
Sbjct: 295 QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEV 354

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            +V+ A  + +D++++GLSP    YN LI  +C  G ++ A +++  +      P   TY
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-- 460
             LI G+ R G ++  R I N++ N G    ++T+N L+  LCK G+ ++A  L  +M  
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474

Query: 461 -------------------------------------------FKMEKEKKWPNIVTYNV 477
                                                       ++      P+I+TYNV
Sbjct: 475 GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNV 534

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           LI GFC+   +  A  L  EL  KG  P+  TY
Sbjct: 535 LINGFCKAKNINGAFKLFRELQLKGHSPDSVTY 567



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 218/477 (45%), Gaps = 32/477 (6%)

Query: 80  PKI-RSFLHMFVKNGKF-----------------TSVSTIFHALSTCSDSLCR-----NS 116
           P+I RS LH   K  +F                   V T+   ++   D+L +     +S
Sbjct: 5   PQICRSVLHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSS 64

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
            I++ +M    +  +P LGF  F          S ++ N ++  L K+  F+    + +E
Sbjct: 65  EIVNDVM---REQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEE 121

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +K   I++   +F+ ++    K+G   KA +    MK  G  P V TYN ++    +K  
Sbjct: 122 LKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKE- 180

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                 A AV+  M++    PN  TF  L++G CK+     A+K+F+EM   GI    + 
Sbjct: 181 --VFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMI 238

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  +++GLC   + D+   L + M  SG  P+ +T NAL++GFCK   +++A  L     
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G    +  Y++LID   +  R ++       M   G+ PDV  Y  LI G    G V+
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++N++   G+      YN L+   C  G   KA SL     ++ K   +P   TY 
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL---QLEISKNDCFPTSCTYT 415

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +LI G C+ G L++A  + N++   G  P+  T+  + + + + G + +     Y +
Sbjct: 416 ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 223/500 (44%), Gaps = 99/500 (19%)

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           C +SI  + L+  + K  +    F   +     G    +   + L+  L +  ++++V+ 
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
             ++M +  IE ++  +  ++ G C+ G ++ A +++ DM   G+SP    YN LI G+C
Sbjct: 328 WCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFC 387

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
               +G + KA ++  ++ +N   P   T+  LI G C++  +  A ++F +M + G + 
Sbjct: 388 D---VGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSP 444

Query: 293 GVVTYNSLINGLCVDGKLDEAVAL-------------------RDEMMA----------- 322
            ++T+N+LI+GLC  G+L+EA  L                    D +M            
Sbjct: 445 SIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERL 504

Query: 323 ------------------SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
                             SG+ P+++T N LINGFCK K +  A  LF ++  +G SP  
Sbjct: 505 CESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDS 564

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV--------- 415
           +TY TLID + +  R EDAF + + M+  G  P  + Y CL+    R+G +         
Sbjct: 565 VTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624

Query: 416 --------------------------EGVRNI--MNELVNNGMRAGLVTYNILVGALCKD 447
                                     + VR +  MN  +NN     +  Y I +  LC+ 
Sbjct: 625 YLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNN---FEIAPYTIWLIGLCQA 681

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG--LIP 505
            +S++A+ +   + + + +   P+ V   +LI G C+ G LE A  +    LEKG  L+P
Sbjct: 682 RRSEEALKIFLVLKECQMDVNPPSCV---MLINGLCKDGNLEMAVDIFLYTLEKGFMLMP 738

Query: 506 ---NQTTYQIVREEMMEKGF 522
              NQ    ++ ++ M+   
Sbjct: 739 RICNQLLRSLILQDKMKHAL 758



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 50/340 (14%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLD------ 187
           + F +  + G   S+++ N L+  L K G+ E+  +++ +M   K   + L L       
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRV 491

Query: 188 ----SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
               S   ++  LC++G + KA  ++  +   GV P ++TYN+LI+G+CK   I   +K 
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFK- 550

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +F+++   G  P+ VT+ TLIDGF + +    A +V ++M  +G       Y  L+  
Sbjct: 551 --LFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608

Query: 304 LCVDGKL------------------DEAVALRDEMMASG---------LKPNVVTSNALI 336
            C  GKL                  DE + L +E    G         L+ N   +N  I
Sbjct: 609 SCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEI 668

Query: 337 N-------GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                   G C+ +  E+A  +F  + E  +  +  +   LI+  CK+G +E A  +   
Sbjct: 669 APYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLY 728

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            L++G +      N L+  L  +  ++   +++N + + G
Sbjct: 729 TLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 768


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 256/551 (46%), Gaps = 51/551 (9%)

Query: 3   CSANSTIEDITELIRNHHW---------SKLKNTDPNTVILQLFNSDADPVLILRYFCWS 53
           C      + +  ++   HW         S L +T  N V+L L  S     +   +F W 
Sbjct: 8   CGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNL--SLDGCCVSWAFFKWV 65

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
              L   HSL  +  ++H+L   K++   ++ L         +S S + +A+    D   
Sbjct: 66  ESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPS-VLNAVVRIHDDPD 124

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
            NS I+  L++ Y  +       + F+    +G K  + +C  LL +L K      V  V
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 184

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           YK+M R  +  N+  FN +++  CK+G + KA  ++ +M+S  + P + TYN LI  YCK
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244

Query: 234 KG------GI--------------------------GKMYKADAVFKDMVENGILPNEVT 261
           KG      GI                          G+M +A  +F+++  NG  PN VT
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVT 302

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           + TLIDG+C+  ++  A+++ E M   G+  GVVTYNS++  LC +GK+ +A  L +EM 
Sbjct: 303 YTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMS 362

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              ++P+ VT N LIN +CK   +  A  +   + E GL P   T+  LI  +CK   ++
Sbjct: 363 ERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVD 422

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A      MLD G  P  STY+ L+     + N E V  + +EL   G+   +  Y  L+
Sbjct: 423 SAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALI 482

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK  K + A    + +F + + K    + V Y  L   + + GK   A+ +L+E+ +
Sbjct: 483 RRLCKIDKIESA----ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 538

Query: 501 KGLIPNQTTYQ 511
           + L+     Y+
Sbjct: 539 RRLMITLKIYR 549



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +L  LC+ GK+  A+ ++ +M    V P  VT N LI+ YCK G +G   K   V 
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK---VK 393

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M+E G+ P++ TF  LI GFCK   + +A +   EM   G +    TY+ L++     
Sbjct: 394 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQ 453

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
              +  + L DE+   GL  ++    ALI   CK   +E A  +F  +  +G+    + Y
Sbjct: 454 DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVY 513

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            +L  AY K G+   A  M + M  R ++  +  Y C  A  + +G++ G+
Sbjct: 514 TSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGL 564



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A+ + + M   G KP++     L+N   K +L      ++  +   G+ P++  +N L
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I A CK G +E A  + N M  R + PD+ TYN LI+   ++G       I + +   G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTYN L+   C++G+ ++A+ L  E+         PN VTY  LI G+C+   LE+
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI-----NGATPNHVTYTTLIDGYCRVNDLEE 318

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L   +  +GL P   TY  +  ++ E+G I D
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N +LR L +EGK +D   +  EM  R++E +  + N ++N  CK G +  A
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   G+ P   T+  LI G+CK   + ++  A     +M++ G  P+  T++ L
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCK---LHEVDSAKEFLFEMLDAGFSPSYSTYSWL 446

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D +   +N  A +++ +E+   G+   +  Y +LI  LC   K++ A  +   M   G+
Sbjct: 447 VDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 506

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           K + V   +L   + K      A  + D++ ++ L  ++  Y     +Y  +G +   F
Sbjct: 507 KGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 565


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 249/531 (46%), Gaps = 41/531 (7%)

Query: 15  LIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKEL-RASHSLLLTGRLLHSL 73
           L+R    S L  +  + V+ QL      P L    F W    +    HSL  +  ++H L
Sbjct: 29  LLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHIL 88

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
              K     +S L   +    F S  ++  AL    D    NS +   L++ Y       
Sbjct: 89  TKFKHLKTAQSLLEK-IAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQ 147

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              + F+     G +  + +C  LL +L K+   + V  VYK+M R  +E N+  +N ++
Sbjct: 148 EAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLI 207

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI- 237
           +  CK+G + KA +++ +M+S  V P + TYN LI  YCKKG               GI 
Sbjct: 208 HACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIK 267

Query: 238 ----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                           G+M +A  +FK++ +    PN VT+ TLIDG+C+  ++  A+++
Sbjct: 268 PDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLNDLDQALRL 325

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            EEM + G+   VVTYNS++  LC  G++ +A  L +EM    ++P+ VT N LIN +CK
Sbjct: 326 REEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCK 385

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              ++ A  + + + E GL     TY  LI  +CK   M+ A  +  SMLD G  P   T
Sbjct: 386 IGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCT 445

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ L+ G   + N E V  + +E V  G+      Y  L+   CK    ++ V    ++F
Sbjct: 446 YSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCK----REQVDYAKKIF 501

Query: 462 KMEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            + +EK    + V Y  L   + + GK   A+ LL+E+ ++ L+     Y+
Sbjct: 502 SLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYR 552



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 5/302 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  +++ N L+    KEG+  +   ++KE+  R    N  ++  +++G C+   L++A
Sbjct: 265 GIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQA 322

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+M++ G+ P VVTYN ++   C+   IG++  A+ +  +M E  I P+ VT NTL
Sbjct: 323 LRLREEMEAQGLYPTVVTYNSILRKLCE---IGRIRDANKLLNEMSEKKIEPDNVTCNTL 379

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+ +CK  ++ +A+KV   M   G+     TY +LI+G C   ++D A  L   M+ +G 
Sbjct: 380 INAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGF 439

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T + L++G+C ++  E    L D+   +GL      Y  LI  +CK  +++ A  
Sbjct: 440 SPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKK 499

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M ++G L D   Y  L     + G      ++++E+    +   L  Y  L  +  
Sbjct: 500 IFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYA 559

Query: 446 KD 447
            D
Sbjct: 560 GD 561



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 5/215 (2%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+ + + MM +G +P++     L+N   K +L +    ++  ++  G+  ++  YN L
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVL 206

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I A CK G +E A  + + M  + V PD+ TYN LI+   ++G      ++ + +   G+
Sbjct: 207 IHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI 266

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +  +VTYN L+   CK+G+ ++A+ L  E+         PN VTY  LI G+C+   L+ 
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEI-----RDATPNHVTYTTLIDGYCRLNDLDQ 321

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L  E+  +GL P   TY  +  ++ E G I D
Sbjct: 322 ALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRD 356



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 42/332 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H F K G+      +F  +   + +    + +ID     Y +           +   
Sbjct: 275 SLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLID----GYCRLNDLDQALRLREEME 330

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL  +V++ N +LR L + G+  D   +  EM  ++IE +  + N ++N  CK G + 
Sbjct: 331 AQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMK 390

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M   G+     TY  LI G+CK   I +M  A  +   M++ G  P+  T++
Sbjct: 391 SALKVKNRMVEAGLKLDQFTYKALIHGFCK---IREMDGAKELLLSMLDAGFSPSYCTYS 447

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+DG+C  +N  A +K+ +E               +  GLCVD  L             
Sbjct: 448 WLVDGYCNQQNEEAVLKLPDEF--------------VRKGLCVDKSL------------- 480

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
                     ALI  FCK++ V+ A+ +F  + E+G     + Y +L  AY K G+   A
Sbjct: 481 --------YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAA 532

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             + + M  R ++  +  Y  L A  + + ++
Sbjct: 533 SDLLDEMYKRRLMITLKIYRALNASYAGDNSI 564


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 208/387 (53%), Gaps = 16/387 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  +++ N L+      G+      V  ++ +R  + +  +F  ++ GLC  G++NKA
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKADAVFKDMVENGILPNEVT 261
               + + + G+    V+Y  LI+G CK    +G I  + K D            PN   
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTK-------PNVEM 201

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NT+ID  CK + +S A  +F EM + GI+A VVTY +LI G C+  KL EA+ L +EM+
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + PNV T N L++  CK+  V++A+ +   + +  + P VITY+TL+D Y     ++
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELK 321

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + N+M   GV PDV +Y  LI G  +   V+   N+  E+    M  G+VTY+ L+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK G+      L+DEM    +++  P N++TYN LI G C+ G L+ A  L N++ +
Sbjct: 382 DGLCKSGRISYVWDLIDEM----RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +G+ P   T+ I+ + + + G + D +
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQ 464



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 211/376 (56%), Gaps = 8/376 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   +S   L+  + K G       + +++  R  + N++ +N +++ LCK   +++A
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M + G+S  VVTY  LI G+C      K+ +A  +  +MV   I PN  T+N L
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIAS---KLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK+  +  A  V   M    +   V+TY++L++G  +  +L +A  + + M   G+
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGV 335

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V +   LINGFCK K+V++A  LF ++ ++ + P ++TY++LID  CK GR+   + 
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M DRG+  +V TYN LI GL + G+++    + N++ + G+R    T+ IL+  LC
Sbjct: 396 LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G+ K A     E F+    K +  ++  YNV+I G C++G LE+A  +L+++ E G +
Sbjct: 456 KGGRLKDA----QEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCV 511

Query: 505 PNQTTYQIVREEMMEK 520
           PN  T+ I+   + +K
Sbjct: 512 PNAVTFDIIINALFKK 527



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 198/357 (55%), Gaps = 6/357 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V   N ++ AL K     +   ++ EM  + I  ++ ++  ++ G C A KL +A  
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    ++P V TYNIL+D  CK+G   K+ +A  V   M++  + P+ +T++TL+D
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEG---KVKEAKNVLAVMLKACVKPDVITYSTLMD 312

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V +Y  LING C +  +DEA+ L  EM    + P
Sbjct: 313 GYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            +VT ++LI+G CK   +     L D++ ++G+  +VITYN+LID  CK G ++ A A+ 
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALF 432

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M D+G+ P   T+  L+ GL + G ++  +    +L+  G    +  YN+++   CK 
Sbjct: 433 NKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           G  ++A+++L    KME+    PN VT++++I    +K + + A  LL +++ +GL+
Sbjct: 493 GLLEEALTMLS---KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 183/326 (56%), Gaps = 3/326 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F      G+ + V++   L+       K ++   +  EM  + I  N+ ++N +++
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LCK GK+ +A +++  M    V P V+TY+ L+DGY     + ++ KA  VF  M   G
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL---VYELKKAQHVFNAMSLMG 334

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+  ++  LI+GFCK++ +  A+ +F+EM    +  G+VTY+SLI+GLC  G++    
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L DEM   G+  NV+T N+LI+G CK   +++A  LF+ + +QG+ P   T+  L+D  
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGL 454

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR++DA      +L +G   DV  YN +I G  ++G +E    +++++  NG     
Sbjct: 455 CKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNA 514

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEM 460
           VT++I++ AL K  ++ KA  LL +M
Sbjct: 515 VTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 166/284 (58%), Gaps = 3/284 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V + N L+ AL KEGK ++ + V   M +  ++ ++ +++ +++G     +L KA 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M  +GV+P V +Y ILI+G+CK   + +   A  +FK+M +  ++P  VT+++LI
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDE---ALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG CK   IS    + +EM   GI A V+TYNSLI+GLC +G LD A+AL ++M   G++
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIR 441

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P   T   L++G CK   ++ A+  F D+  +G    V  YN +I+ +CK+G +E+A  M
Sbjct: 442 PCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTM 501

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            + M + G +P+  T++ +I  L ++   +    ++ +++  G+
Sbjct: 502 LSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 138/250 (55%), Gaps = 3/250 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V++ + L+       + +  ++V+  M    +  ++ S+  ++NG CK   +++A 
Sbjct: 300 VKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEAL 359

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++ ++M    + P +VTY+ LIDG CK G I  ++    +  +M + GI  N +T+N+LI
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD---LIDEMRDRGIPANVITYNSLI 416

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG CK+ ++  A+ +F +M   GI     T+  L++GLC  G+L +A     +++  G  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYH 476

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +V   N +ING CK+ L+E+A  +   + E G  P+ +T++ +I+A  K+   + A  +
Sbjct: 477 LDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKL 536

Query: 387 RNSMLDRGVL 396
              M+ RG+L
Sbjct: 537 LRQMICRGLL 546



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 19/295 (6%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P  + FN ++D F K ++ S A+ +   +   GI   ++T N LIN  C  G++    ++
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +++  G +P+ +T   LI G C K  V KA    D +  QG+    ++Y TLI+  CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G    A  +   +  R   P+V  YN +I  L +   V     + +E+   G+ A +VT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+   C   K K+A+ LL+EM     +   PN+ TYN+L+   C++GK+++A  +L 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMV---LKTINPNVYTYNILVDALCKEGKVKEAKNVLA 293

Query: 497 ELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
            +L+  + P+  TY                Q V   M   G  PD+  +   I+G
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILING 348



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +N+  A+  F  M        ++ +N +++          AV+L   +   G++P+++T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N LIN FC    +     +   I ++G  P  IT+ TLI   C +G++  A    + +L 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G+  D  +Y  LI G+ + G+  G   ++ ++     +  +  YN ++ ALCK     +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L  E   M  +    ++VTY  LI GFC   KL++A GLLNE++ K + PN  TY I
Sbjct: 218 AYGLFSE---MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 513 VREEMMEKG 521
           + + + ++G
Sbjct: 275 LVDALCKEG 283


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 205/390 (52%), Gaps = 8/390 (2%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           FE  K AG      +V++   ++  L+K G+ ED    ++EM          ++  V++G
Sbjct: 131 FEELKTAG---CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDG 187

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCKA  L  A  + E M   G  P  +TY  LIDG+ K     KM +A  +   M+  G 
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS---KMDEARKLLDVMLTKGP 244

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P  VT+ +++ GFCK + I+ A +V  +M   G   G+  + SL++     G+ +EA  
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 304

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  EM A G  P+V+   +LI+       V +AR +FD + E+G +P  +TY T+I  + 
Sbjct: 305 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 364

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G +E A  +   M   GV PD   YN L+ G  +   V+    + + +V +G++   V
Sbjct: 365 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 424

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T+N+L+  L KDGK+ +A SL  EM  +EKE+  P +V+Y +LI G  + G++ +A    
Sbjct: 425 TFNVLMHGLFKDGKTDRAFSLFKEM--LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            E++++G+IP   TY  +   + + G IP+
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPE 512



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 206/417 (49%), Gaps = 19/417 (4%)

Query: 110 DSLCRNSII-IDMLMLAYVKNMKPHLGF----EAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D+ C   +I    L+  + K  +P +G     +A KR      +  V     ++    K 
Sbjct: 35  DNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-----FRPDVFLYTSVIHGYCKA 89

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G   D++  Y      +  L++ S+  V+ GL  + ++++A ++ E++K+ G SP VV Y
Sbjct: 90  G---DLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAY 146

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             +IDG  K G I    K    F++M  +  +P   T+  +IDG CK + +  A KVFE+
Sbjct: 147 TAVIDGLLKAGRIEDGLKN---FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQ 203

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G     +TY +LI+G     K+DEA  L D M+  G +P  VT  ++++GFCK  +
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 263

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           + +A+ +   + E+G  P +  + +L+  Y  +GR E+A+ +   M  RG  PDV  Y  
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI  L   G V   R++ + ++  G     +TY  ++    K G  + A  +L+    M 
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE---LMA 380

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           K    P+   YN L+ G+ +  +++ A G+ + ++  G+ PN  T+ ++   + + G
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 177/346 (51%), Gaps = 7/346 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + + ++   ++    K     + + V  +M+ R  E  L  F  +L+     G+  +A
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M + G +P V+ Y  LID     G   ++ +A  VF  M+E G  P+ +T+ T+
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTG---RVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F K  N+ AA ++ E M   G+      YNSL++G     ++D+A  + D M+ASG+
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAF 384
           KPN VT N L++G  K    ++A  LF ++ E + + P++++Y  LID   K GR+ +AF
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                M+DRG++P+  TY  LI  L++ G +   + ++ ++V  G+   +  Y+ L+  L
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
                   A  +  EM    K    PN VTY VL +GF   G+  D
Sbjct: 540 IDSSMVDTAWDVFQEMM---KRGCAPNEVTYKVLRRGFRAAGRALD 582



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 170/359 (47%), Gaps = 31/359 (8%)

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--GIG-- 238
           E  + S+N V++GL    K+++A      M   G  P V+ +  LI G+CK G   +G  
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 239 ------KMYKADAVFKDMVENG--------------ILPNE----VTFNTLIDGFCKDEN 274
                 K ++ D      V +G              + P      +++ T+I G    + 
Sbjct: 64  LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKR 123

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A ++FEE+ + G +  VV Y ++I+GL   G++++ +   +EM  S   P   T   
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I+G CK +++  A  +F+ + ++G  P  ITY TLID + K  +M++A  + + ML +G
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P   TY  ++ G  +   +   + ++ ++   G   GL  +  L+      G++++A 
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            +L E   M      P+++ Y  LI      G++ +A  + + ++EKG  P+  TY  +
Sbjct: 304 QVLTE---MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 38/349 (10%)

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G  P +V+YN +I G      I KM +A   F  M++NG  P+ + F TLI GFCK   
Sbjct: 1   MGCEPTIVSYNTVISGL---ASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ 57

Query: 275 ISAAMKVFEEMGS-------------HGIA-AG-----------------VVTYNSLING 303
                K+  +                HG   AG                 V++Y ++I G
Sbjct: 58  PQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKG 117

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           L    ++DEA  L +E+  +G  PNVV   A+I+G  K   +E     F+++S     P+
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TY  +ID  CK   + DA  +   M+ +G +PD  TY  LI G S+   ++  R +++
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++  G     VTY  +V   CK     +A  ++ +M +   E   P +  +  L+  + 
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE---PGLFIFTSLLSYYL 294

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            KG+ E+A  +L E+  +G  P+   Y  + + +   G +P+   H+++
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEAR-HVFD 342



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 10/308 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           S L  ++  G+      +   ++   C+  +   + +ID+L          H+    F  
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV----FDS 343

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + G     L+   +++   K G  E    + + M +  +  +  ++N +++G  K  +
Sbjct: 344 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 403

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEV 260
           +++A  + + M + G+ P  VT+N+L+ G  K G   K  +A ++FK+M+E   + P  V
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG---KTDRAFSLFKEMLEKEEVPPTLV 460

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++  LIDG  K   +S A   F+EM   GI     TY SLI  L   G++ EA  L ++M
Sbjct: 461 SYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 520

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G+ P+V   +ALI G     +V+ A  +F ++ ++G +P+ +TY  L   +   GR 
Sbjct: 521 VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580

Query: 381 EDAFAMRN 388
            D  A++ 
Sbjct: 581 LDLEAVKQ 588



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 34/253 (13%)

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G    +V+YN++I+GL    K+DEA    + M+ +G +P+V+    LI+GFCK    +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP----DVSTYNC 404
             L +   ++   P V  Y ++I  YCK G ++  +        R V P    DV +Y  
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYF-------RAVTPKASLDVISYTT 113

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I GL+    ++    +  EL   G    +V Y  ++  L K G+ +  +   +EM    
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM---S 170

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
                P   TY V+I G C+   L DA  +                    E+M++KG +P
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVF-------------------EQMVQKGCVP 211

Query: 525 DIEGHMYNISGTS 537
           D   +   I G S
Sbjct: 212 DTITYTTLIDGFS 224


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 248/552 (44%), Gaps = 82/552 (14%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVST 100
           DP L  ++F WS       HS+     + H L  A+ Y    S L  M +          
Sbjct: 121 DPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDV 180

Query: 101 IFHALSTCS------DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
           ++   + C       D+L   S++ID+ ML            + F +   + +     SC
Sbjct: 181 LWSTRNVCVPGFGVFDAL--FSVLIDLGML--------EEAIQCFSKMKRFRVFPKTRSC 230

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL    K GK +DV+  +K+M        + ++N +++ +CK G +  A  + E+MK 
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
            G+ P  VTYN +IDG+ K G +                                GK+  
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
               +++M  NG+ PN V+++TL+D FCK+  +  A+K + +M   G+     TY SLI+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C  G L +A  L +EM+  G++ NVVT  ALI+G C  + +++A  LF  +   G+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           ++ +YN LI  + K   M+ A  + N +  RG+ PD+  Y   I GL     +E  + +M
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK-------------- 468
           NE+   G++A  + Y  L+ A  K G   + + LLDEM +++ E                
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590

Query: 469 -------------------WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
                                N   +  +I G C+  ++E A  L  ++++KGL+P++T 
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650

Query: 510 YQIVREEMMEKG 521
           Y  + +   ++G
Sbjct: 651 YTSLMDGNFKQG 662



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 216/458 (47%), Gaps = 46/458 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
           S +  F K G+       F  +    D  C   +I  + L+  + K  K  +G E ++  
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMK---DMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              GLK +V+S + L+ A  KEG  +     Y +M+R  +  N  ++  +++  CK G L
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           + A  +  +M  +GV   VVTY  LIDG C      +M +A+ +F  M   G++PN  ++
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA---ERMKEAEELFGKMDTAGVIPNLASY 475

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI GF K +N+  A+++  E+   GI   ++ Y + I GLC   K++ A  + +EM  
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535

Query: 323 SGLKPN-----------------------------------VVTSNALINGFCKKKLVEK 347
            G+K N                                   VVT   LI+G CK KLV K
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595

Query: 348 ARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           A   F+ IS   GL  +   +  +ID  CK+ ++E A  +   M+ +G++PD + Y  L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  ++GNV     + +++   GM+  L+ Y  LV  L    + +KA S L+EM     E
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI---GE 712

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              P+ V    ++K   + G +++A  L + L++  L+
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 213/414 (51%), Gaps = 41/414 (9%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G++++    N LL  L +  K + +E  Y EM  + IE ++ +FN V++ LC+A +   
Sbjct: 155 FGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQART 214

Query: 205 ASDIMEDMKS-----------------------------------LGVSPKVVTYNILID 229
           A  ++E+M S                                   +G SP  VT N+LI+
Sbjct: 215 AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLIN 274

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           GYCK G +G    A    +  + +G  P+ VTF+T ++G C++ ++  A+KV   M   G
Sbjct: 275 GYCKLGRVG---DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               V TY+++IN LC +G+L+EA  + ++M+ SG  P+  T N LI   C +  +E+A 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L  +++ +GLSP+V T+N LI+A CK G    A  +   M   G  PD  TYN LI  L
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G +    +++ E+  +G     VTYN ++  LCK  + ++A  + D+   M+     
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ---MDVTGIG 508

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            N +T+N LI G C   +++DA  L+++++ +GL PN  TY  +     ++G I
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 237/488 (48%), Gaps = 29/488 (5%)

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRN 115
           R + + +L    + S  VA       + +  FV+ G   +   +   +S   CS +    
Sbjct: 210 RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT---- 265

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           S+ +++L+  Y K  +        ++    G +   ++ +  +  L + G  +    V  
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            M +   E ++ +++ V+N LC  G+L +A  I+  M   G  P   T+N LI   C + 
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
              ++ +A  + +++   G+ PN  TFN LI+  CK  +   A+++FEEM S G     V
Sbjct: 386 ---QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN LI+ LC  GKL +A+ L  EM  SG   + VT N +I+G CK++ +E+A  +FD +
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              G+  + IT+NTLID  C   R++DA  + + M+  G+ P+  TYN ++    ++GN+
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
               +I+  +  NG    +VTY  L+  LCK  +++ A+ LL  M +M+  K  P    Y
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM-RMKGMKPTPK--AY 619

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE-----------------EMM 518
           N +I+   +     DA  L  E+ E G  P+  TY+IV                   EM 
Sbjct: 620 NPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMA 679

Query: 519 EKGFIPDI 526
           + GFIP+ 
Sbjct: 680 DNGFIPEF 687



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 191/362 (52%), Gaps = 7/362 (1%)

Query: 167 FEDV-EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           F+D  + V  ++    ++ N + +N +L  L +  K+        +M S G+ P VVT+N
Sbjct: 141 FDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFN 200

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +ID  C+     +   A  + ++M    + P+E TF TL++GF ++ +I AA+++   M
Sbjct: 201 TVIDALCRAR---QARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G +   VT N LING C  G++ +A+    + +A G +P+ VT +  +NG C+   V
Sbjct: 258 SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV 317

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           + A  +   + ++G  P V TY+T+I+  C  G +E+A  + N M+D G LPD +T+N L
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I  L  E  +E   ++  EL   G+   + T+NIL+ ALCK G    AV L +EM   + 
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM---KS 434

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
               P+ VTYN+LI   C  GKL  A  LL E+   G   +  TY  + + + ++  I +
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEE 494

Query: 526 IE 527
            E
Sbjct: 495 AE 496



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 154/337 (45%), Gaps = 74/337 (21%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G      + N L+ AL  E + E+   + +E+  + +  N+ +FN ++N LCK G  +
Sbjct: 364 DSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPH 423

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  + E+MKS G +P  VTYNILID  C  G   K+ KA  + K+M  +G   + VT+N
Sbjct: 424 LAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG---KLAKALDLLKEMEVSGCPQSTVTYN 480

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           T+IDG CK   I  A +VF++M   GI    +T+N+LI+GLC   ++D+A  L D+M++ 
Sbjct: 481 TIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISE 540

Query: 324 GLKPNVVTSNA-----------------------------------LINGFCKKKLVEKA 348
           GL+PN VT N+                                   LING CK +  + A
Sbjct: 541 GLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAA 600

Query: 349 R-----------------------------------VLFDDISEQGLSPSVITYNTLIDA 373
                                                LF +++E G  P   TY  +   
Sbjct: 601 LKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRG 660

Query: 374 YCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            C+ G  +++AF     M D G +P+ S++  L  GL
Sbjct: 661 LCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 11/240 (4%)

Query: 279 MKVF-EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL-RDEMMASGLKPNVVTSNALI 336
           MKV   EM   G   G+    S I         D+A  L  +++   G++ N    N L+
Sbjct: 109 MKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLL 168

Query: 337 NGFC---KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
                  K KL+E A   + ++S QG+ P V+T+NT+IDA C+  +   A  M   M   
Sbjct: 169 TVLAEGSKIKLLESA---YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSC 225

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            V PD +T+  L+ G   EG++E    +   +   G     VT N+L+   CK G+   A
Sbjct: 226 DVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDA 285

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +  + +      E   P+ VT++  + G CQ G ++ A  +L  +L++G  P+  TY  V
Sbjct: 286 LGYIQQEIADGFE---PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 236/483 (48%), Gaps = 38/483 (7%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           +H +   G+    + +F  +   S  L  N +I +  + +  K+ +     E F      
Sbjct: 342 IHGYATLGRLKEAAKMFRKMK--SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  ++S   LL     EG F D+  ++  MK   I  +   FN +++   K G ++ A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I  +M+  GVSP VVTY+ +I  + +   +G++  A   F  MV  GI PN   ++++
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSR---MGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           I GFC    +  A ++  EM + GI    +V +NS+IN LC DG++ +A  + D +   G
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +P+V+T  +LI+G+C    ++KA  + D +   G+   ++TY+TL+D Y K GR+ D  
Sbjct: 577 ERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGL 636

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +GV P+  TY  ++AGL R G     R   +E++ +G    +  Y I++G L
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696

Query: 445 CKDGKSKKAV-------------------SLLDEMFKMEKEKK-------------WPNI 472
           C++  + +A+                   ++++ M+K++++++              PN 
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            TY V+I    + G +EDAN + + + + G++P       +   ++EKG I     ++  
Sbjct: 757 STYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSK 816

Query: 533 ISG 535
           + G
Sbjct: 817 VDG 819



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 203/409 (49%), Gaps = 10/409 (2%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKR 179
           +LM    +  +P LG   F      GLK   ++ + LL+ L    + E+ V  +   M  
Sbjct: 162 ILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSE 221

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGI 237
                N+ S++ +L GLC      +A D+ + M   G   SP VV YN +I G+ K+G  
Sbjct: 222 LGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGET 281

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GK   A ++F +M   G+ P+ VT+N +ID  CK   +  A  V  +M ++G     VTY
Sbjct: 282 GK---ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N +I+G    G+L EA  +  +M + GL PN+V  N+ +   CK    ++A  +FD ++ 
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G  P +++Y TL+  Y  EG   D   + NSM   G+  D   +N LI   ++ G V+ 
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I  E+   G+   +VTY+ ++ A  + G+   A+   ++M     +   PN   Y+ 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQ---PNTAVYHS 515

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKGFIPD 525
           +I+GFC  G L  A  L++E++ KG+  P+   +  V   + + G + D
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 197/384 (51%), Gaps = 7/384 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G+K  V++ N ++ AL K    +  E V ++M     + +  ++N +++G   
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+L +A+ +   MKS G+ P +V  N  +   CK    G+  +A  +F  M   G  P+
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKH---GRSKEAAEIFDSMTAKGHKPD 404

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V++ TL+ G+  +   +  + +F  M S+GIAA    +N LI+     G +D+A+ +  
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM   G+ P+VVT + +I+ F +   +  A   F+ +  +G+ P+   Y+++I  +C  G
Sbjct: 465 EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524

Query: 379 RMEDAFAMRNSMLDRGV-LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            +  A  + + M+++G+  PD+  +N +I  L ++G V    +I + + + G R  ++T+
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+   C  GK  KA  +LD M  +  E    +IVTY+ L+ G+ + G++ D   L  E
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAMEVVGVET---DIVTYSTLLDGYFKNGRINDGLTLFRE 641

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           +  KG+ PN  TY I+   +   G
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAG 665



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 153/303 (50%), Gaps = 3/303 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++ +L K+G+  D   ++  +       ++ +F  +++G C  GK++KA  I++ M+ 
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +GV   +VTY+ L+DGY K G I        +F++M   G+ PN VT+  ++ G  +   
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRIND---GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
             AA K F EM   G    V  Y  ++ GLC +   DEA+ L  ++    +K ++   N 
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +IN   K +  E+A+ LF  IS  GL P+  TY  +I    K+G +EDA  M +SM   G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG 786

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           ++P     N +I  L  +G +    N ++++    +     T ++++    + GK  + +
Sbjct: 787 IVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDM 846

Query: 455 SLL 457
            LL
Sbjct: 847 KLL 849



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 172/397 (43%), Gaps = 68/397 (17%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +D  +++ E+ R+   +   S N  L  L +A     +S  + D  +L ++        L
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLTALARA---TSSSACITDGPALALA--------L 139

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMG 286
            +  C++    +               ++P  V T++ L+D  C+       + +F  + 
Sbjct: 140 FNRVCREQAGPR---------------VVPLTVHTYSILMDCCCRARRPDLGLVLFGCIL 184

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAV------------------------ALRD---- 318
             G+    +T ++L+  LC   + +EAV                         L D    
Sbjct: 185 RTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMS 244

Query: 319 -------EMMA---SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
                  +MMA       PNVV  N +I+GF K+    KA  LF +++ QG+ P V+TYN
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            +IDA CK   M+ A  +   M   G  PD  TYNC+I G +  G ++    +  ++ + 
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   +V  N  + +LCK G+SK+A  + D    M  +   P+IV+Y  L+ G+  +G  
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDS---MTAKGHKPDIVSYCTLLHGYASEGWF 421

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            D  GL N +   G+  +   + I+     ++G + D
Sbjct: 422 ADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 222/405 (54%), Gaps = 15/405 (3%)

Query: 129 NMKPHLGFEAFKRAGDYGLKS---SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           N+  HL  E       YG+K     V + + L+  L KEGK  +   + + M +R   L+
Sbjct: 322 NIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 381

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG-KMYKAD 244
           + +++ ++ GLC   ++++A+ +   M+ LG  P  +TY  L+ G C+ G I   +    
Sbjct: 382 IVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQ 441

Query: 245 AVFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
            +  D    GI   P  ++++ +IDG CKD     A ++FEEM + GI   V++Y +LI+
Sbjct: 442 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIH 501

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C+ GK ++A  L +EM+  G++P+V TS+ LI+  CKK  V +A  L + + ++G   
Sbjct: 502 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL 561

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV----EGV 418
            V+T  TL+   C + R+  A  +   M   G +P+V T   L+ GL + GN+    E  
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621

Query: 419 RNIMNELVNNGM--RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
           +N++++    G+  +   ++Y+I++  LCK G+  +A  L  EM  +      P++++Y 
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL---GVIPDVISYT 678

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            LI GFC+ GK +DA  L NE+++ G+ P+ TT+ ++ + + ++G
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 215/394 (54%), Gaps = 12/394 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D G++  V + + L+  L K+GK  +   + + + +R   L++ +   ++ GLC 
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-VFKDMVENGI-- 255
             +++KA+ +   M+ LG  P VVT   L+ G C+ G I    +    +  D    GI  
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN ++++ +IDG CK      A ++F+EM + G+   V++Y SLI+G C  GK  +A  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM+  G++P+V T + LI+  CK+  V +A  L + + ++G  P+ +TY TL+   C
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG-- 433
              R+ +A  +   M   G LPDV TY  L+ GL + GN++    +  +++++  + G  
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 434 ----LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               +++Y+I++  LCK G+  +A  L  EM  +      PN+++Y  LI GFC+ GKLE
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKAL---GVIPNVISYTSLIHGFCRSGKLE 872

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           DA  L NE++++G+  N  TY ++     ++G I
Sbjct: 873 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 227/434 (52%), Gaps = 17/434 (3%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  +L   SIIID L     K+ +     E F+     G+   V+S   L+      GK+
Sbjct: 454 CKPTLISYSIIIDGL----CKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW 509

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E  + ++ EM    I+ ++ + + +++ LCK GK+ +A+ ++E +   G    VVT   L
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTL 569

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           + G C K    ++ KA  +F  M + G +PN VT  TL+ G C+  NI  A+++ + M S
Sbjct: 570 VKGLCMKH---RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626

Query: 288 HGIAAGV------VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
                G+      ++Y+ +I+GLC  G+ DEA  L  EM A G+ P+V++  +LI+GFC+
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
               + A+ LF+++ + G+ P V T++ LID  CKEG++ +A  +   M+ RG +P+  T
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  L+ GL     +     +  ++   G    +VTY  L+  LC+ G  K A+ L  +M 
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806

Query: 462 KMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
               +      P++++Y+++I G C+ G+ ++A  L  E+   G+IPN  +Y  +     
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866

Query: 519 EKGFIPDIEGHMYN 532
             G + D + H++N
Sbjct: 867 RSGKLEDAK-HLFN 879



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 183/330 (55%), Gaps = 15/330 (4%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR------RIELNLDSFN 190
           + F +    G   +V++C  L++ L + G  +    ++K M           + N  S++
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++GLCK G+ ++A ++ ++MK+LGV P V++Y  LI G+C+ G   K   A  +F +M
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG---KWKDAKYLFNEM 700

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           V+ G+ P+  TF+ LID  CK+  +  A ++ E M   G     VTY +L+ GLC++ ++
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCK----KKLVEKARVLFDDISEQG--LSPSV 364
            EA  L  +M   G  P+VVT   L+ G C+    K  +E  + +  D  + G    P V
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           I+Y+ +ID  CK GR ++A  +   M   GV+P+V +Y  LI G  R G +E  +++ NE
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +V+ G++   VTY++++   CK+G+  KA+
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 208/389 (53%), Gaps = 13/389 (3%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           Y ++  V + + L+  L KEGK  +   + + M +R   L++ +++ ++ GLC   ++++
Sbjct: 48  YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG-KMYKADAVFKDMVENGIL--PNEVT 261
           A+ +   M+ LG  P  +TY  L+ G C+ G I   +     +  D    GI   P  ++
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           ++ +IDG CKD     A ++F+EM + G+   V++Y SLI+G C  GK ++A  L +EM+
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G++P+V TS  LI+ FCK+  V +A  L + +  +G    ++TY+TLI   C + R+ 
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRIS 287

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-------MRAGL 434
           +A  +  SM   G  PD   Y  L+ GL + G +    ++  E++N+        +R  +
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            T ++L+  LCK+GK  +A  LL+ M    +     +IVTY+ LIKG C + ++ +A  L
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMI---QRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFI 523
              + + G  P+  TY  + + + + G I
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNI 433



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 183/354 (51%), Gaps = 24/354 (6%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI---------LIDGYCKKGGIG 238
           +FN ++N LC   ++N+    M  +   G  P +VTY+I         LID  CK+   G
Sbjct: 12  TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE---G 68

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ +A+ + + M++ G + + VT++TLI G C +  IS A  +F  M   G     +TY 
Sbjct: 69  KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 128

Query: 299 SLINGLCVDGKLDEAVALRDEMM------ASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
           +L+ GLC  G ++ A+ L  EM+          KP +++ + +I+G CK +  ++AR LF
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++  QG+ P VI+Y +LI  +C  G+ E A  + N MLD G+ PDV+T   LI    +E
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G V     ++  +V+ G    +VTY+ L+  LC   +  +A  L      M+K    P+ 
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF---MSMKKLGCRPDA 305

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           + Y  L+KG CQ GK+  A  L  E+L      +Q   + +R ++     + DI
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLND---TSQYGIKCIRPDVTTSSMLIDI 356



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 24/422 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +H F  +GK+     +F+ +        +  +S++IDML     K  K     +  + 
Sbjct: 498 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML----CKKGKVIEANKLLEV 553

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G    V++C  L++ L  + +      ++ +M++     N+ +   ++ GLC++G 
Sbjct: 554 VIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 613

Query: 202 LNKASDIMEDMKS------LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           +  A ++ ++M S      +   P  ++Y+I+IDG CK    G+  +A  +FK+M   G+
Sbjct: 614 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK---CGREDEARELFKEMKALGV 670

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+ +++ +LI GFC+      A  +F EM   G+   V T++ LI+ LC +GK+ EA  
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L + M+  G  PN VT   L+ G C    + +A  LF  + + G  P V+TY TL+   C
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790

Query: 376 KEGRMEDAFAMRNSML-DRGVL-----PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           + G ++ A  +   ML D G       PDV +Y+ +I GL + G  +  R +  E+   G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   +++Y  L+   C+ GK + A  L +EM     +    N VTY+V+I GFC++G+++
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD---QGVQLNAVTYSVMIHGFCKEGQID 907

Query: 490 DA 491
            A
Sbjct: 908 KA 909



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 209/415 (50%), Gaps = 23/415 (5%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  +L   SIIID L     K+ +     E FK     G+   V+S   L+      GK+
Sbjct: 161 CKPTLISYSIIIDGL----CKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKW 216

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E  + ++ EM    I+ ++ +   +++  CK GK+ +A++++E M   G    +VTY+ L
Sbjct: 217 EKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTL 276

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-- 285
           I G C K    ++ +A  +F  M + G  P+ + + TL+ G C+   I+ A+ + +EM  
Sbjct: 277 IKGLCMK---HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333

Query: 286 -----GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
                G   I   V T + LI+ LC +GK+ EA  L + M+  G   ++VT + LI G C
Sbjct: 334 DTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 393

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRG----- 394
            +  + +A  LF  + + G  P  ITY TL+   C+ G +  A  +   ML D G     
Sbjct: 394 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 453

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P + +Y+ +I GL ++   +  R +  E+   G+   +++Y  L+   C  GK +KA 
Sbjct: 454 CKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 513

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            L +EM  +  +   P++ T +VLI   C+KGK+ +AN LL  ++++G I +  T
Sbjct: 514 CLFNEMLDVGIQ---PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVT 565



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 169/333 (50%), Gaps = 16/333 (4%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA------VFKDMVENGILPNEVTFNTL 265
           M+  G+ P   T+NILI+  C    + +   A A         D+V   I P+  T + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK+  +  A ++ E M   G    +VTY++LI GLC++ ++ EA  L   M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 326 KPNVVTSNALINGFCKKKLVEKA----RVLFDDISEQGL--SPSVITYNTLIDAYCKEGR 379
           +P+ +T   L+ G C+   +  A    + + +D    G+   P++I+Y+ +ID  CK+ R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            ++A  +   M  +G++PDV +Y  LI G    G  E  + + NE+++ G++  + T  +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+   CK+GK  +A  LL+ M          +IVTY+ LIKG C K ++ +A  L   + 
Sbjct: 241 LIDMFCKEGKVIEANELLEVMV---HRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
           + G  P+   Y  + + + + G I +I  H++ 
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKI-NIALHLHQ 329


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 219/457 (47%), Gaps = 56/457 (12%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAY---VKNMKPHLGF-EAFKRAGDYGLKSSVLSCNQLLRA 160
           L+T   +L R+ ++ DM  LA    V+N+  +     A+  AGD  L ++    + LLRA
Sbjct: 46  LNTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGD--LPAAKRHLSSLLRA 103

Query: 161 ---------------LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
                            + G F     ++  M +R       ++  +L GLC AG + +A
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G +P    Y+I++ G C   G G+  +A A+  D +  G +PN   +N L
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLC---GAGRAGEAVALLTDAMGKGFVPNVAVYNAL 220

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C   ++  A+ +F+ M S G    V TY  LI G C  GK++ A+ L   M+ +GL
Sbjct: 221 IDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGL 280

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT   LI G C +  +E A  L   +   GL+P+  T   LIDA CK GR+E+A  
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ 340

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
              S++ +G+  +   Y  +I  L + G  +G  N+M +++  G       Y+ L+  LC
Sbjct: 341 FLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLC 400

Query: 446 KDGKSKKAVSLLDEMF--------------------------------KMEKEKKWPNIV 473
           ++ K  +A+SLL++M                                 +M      P++V
Sbjct: 401 RENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVV 460

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           TY V I+ +CQ G++EDA  ++ ++++ G+ PN TTY
Sbjct: 461 TYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 38/451 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  + + L+  Y       L  + FK     G   +V +  QL+    K GK E    +Y
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M    +  N+ ++  ++ G C  G L  A  ++  M++ G++P   T  +LID  CK 
Sbjct: 273 SRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKH 332

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   ++ +A      +V+ GI  N+V + ++ID  CK      A  + +++ + G     
Sbjct: 333 G---RIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDA 389

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y+SLI+GLC + KL EA++L ++M+ SG++ N V    LI+   ++   +  +++ D 
Sbjct: 390 HMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDR 449

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           ++  G+ P V+TY   I +YC++GRMEDA +M   M+D GV P+++TYN LI G +  G 
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGL 509

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS----------------LLD 458
           V    + +  +++NG +    +Y +L+G L K       V+                LL+
Sbjct: 510 VSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLE 569

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--- 515
           E+ K++          Y+  I+   +  +LE+A   L  +    L P++  Y  + E   
Sbjct: 570 EVIKLQCSSAS---YVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 516 -------------EMMEKGFIPDIEGHMYNI 533
                         M+++ ++P +E + + I
Sbjct: 627 RMKLLKEALRFLDSMVKRNYLPRLESYRFII 657



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 211/465 (45%), Gaps = 27/465 (5%)

Query: 80  PKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P +R++  +   F K+GK      ++  +      L  N +    L+            F
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRM--IEAGLAPNVVTYTTLIQGQCSEGHLEHAF 304

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                    GL  +  +C  L+ AL K G+ E+ +     + ++ I++N   +  +++ L
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK+GK + A ++M+ + + G  P    Y+ LIDG C++    K+ +A ++  DM+E+G+ 
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN---KLLEAISLLNDMIESGVQ 421

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            N V F  LID   ++    +   + + M + G+   VVTY   I   C DG++++A ++
Sbjct: 422 ANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M+  G++PN+ T N LI G+    LV +A     ++ + G  P+  +Y  L+    K
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLK 541

Query: 377 EGRMEDAFAMRNSM---LDRGVLPDV-------------STYNCLIAGLSREGNVEGVRN 420
           +    D  A   S+   +D  VL ++               Y+C I  LS+   +E  ++
Sbjct: 542 KNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKS 601

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            +  + +  +      Y  ++    +    K+A+  LD M K       P + +Y  +I 
Sbjct: 602 FLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVK---RNYLPRLESYRFIIC 658

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             C++G    A  +  ++L K    ++  ++I+ + +++KG   D
Sbjct: 659 ALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTAD 703



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 168/389 (43%), Gaps = 45/389 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIF------------HALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
           S +    K+GKF     +             H  S+  D LCR + +++ + L  + +M 
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISL--LNDMI 416

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
                       + G++++ +    L+   ++E + +  + +   M    ++ ++ ++  
Sbjct: 417 ------------ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTV 464

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
            +   C+ G++  A  +M  M   GV P + TYN LI GY   G + + + +    K+M+
Sbjct: 465 FIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSS---LKNMI 521

Query: 252 ENGILPNEVTFNTLIDGFCKD--------ENIS----AAMKVFEEMGSHGI----AAGVV 295
           +NG  PN+ ++  L+    K         ++IS      MKV EE+    I    ++   
Sbjct: 522 DNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASY 581

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            Y+  I  L    +L+EA +    M ++ L P+      +I    + KL+++A    D +
Sbjct: 582 VYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSM 641

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            ++   P + +Y  +I A C+EG    A ++   +L +    D   +  LI GL ++GN 
Sbjct: 642 VKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNT 701

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                +++ +     R G   Y+ L G +
Sbjct: 702 ADCSRLLSFMEEQNCRPGSAIYSRLTGEI 730


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 222/425 (52%), Gaps = 35/425 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F    D G+  + ++ N ++   VK G  E    +  +M +   + N+ ++N +L+
Sbjct: 214 ALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI-- 237
           GLC+AG++++   +M++M S  + P   TY+IL DG  + G               G+  
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GK+ KA+ V + +V  G++P    +NTLI+G+C+  ++  A  +F
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M S  I    +TYN+LINGLC    + EA  L  EM  SG+ P+V T N LI+ + + 
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +EK   +  D+ ++G+  +VI++ +++ A+CK G++ +A A+ + M+ + V+P+   Y
Sbjct: 454 GQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVY 513

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I      G  E    ++ ++ ++G+ A + TYN+L+  LCK+ +  +A  L+   + 
Sbjct: 514 NSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI---YN 570

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           +  +   P++V+YN +I   C KG  + A  LL E+ +  + P   TY  +   +   G 
Sbjct: 571 LTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGR 630

Query: 523 IPDIE 527
           + D+E
Sbjct: 631 VHDME 635



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 35/403 (8%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             S N ++  L + GK  D   V+ EM  R +  N  ++N +++G  K G L     + +
Sbjct: 195 AFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRD 254

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G  P VVTYN+L+ G C+    G+M +  A+  +M    +LP+  T++ L DG  
Sbjct: 255 QMLQDGRKPNVVTYNVLLSGLCRA---GRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +  +    + +F E    G+  G  T + L+NGLC DGK+ +A  + + ++ +GL P   
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N LING+C+ + ++ A  +F+ +  + + P  ITYN LI+  CK   + +A  +   M
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              GV P V T+N LI    R G +E    +++++ + G+++ ++++  +V A CK+GK 
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491

Query: 451 KKAVSLLDEMF--------------------------------KMEKEKKWPNIVTYNVL 478
            +AV++LD+M                                 KM+      +I TYN+L
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +KG C+  ++++A  L+  L  +GL P+  +Y  +      KG
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 160/315 (50%), Gaps = 9/315 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  +    N L+    +    +    ++++MK R I  +  ++N ++NGLCK   + +A
Sbjct: 365 GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEA 424

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++ +M+  GV P V T+N LID Y   G  G++ K   V  DM + GI  N ++F ++
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAY---GRAGQLEKCFTVLSDMQDKGIKSNVISFGSV 481

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +  FCK+  I  A+ + ++M    +      YNS+I+     G  ++A  L ++M +SG+
Sbjct: 482 VKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGV 541

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             ++ T N L+ G CK   +++A  L  +++ QGL P V++YNT+I A C +G  + A  
Sbjct: 542 SASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALE 601

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M    + P + TY+ L++ L   G V  +  +   +V+  +      Y    G  C
Sbjct: 602 LLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY----GTRC 657

Query: 446 KDGKSKKAVSLLDEM 460
           ++    K  SL  EM
Sbjct: 658 EN--ESKVASLKKEM 670



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 165/345 (47%), Gaps = 13/345 (3%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +L S N +L  L   G+          + + G  P    +N  +      G + +   A 
Sbjct: 122 SLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE---AL 178

Query: 245 AVFKDM--VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A+ + M   E    P+  ++N +I G  +    S A+KVF+EM   G+A   +TYN++I+
Sbjct: 179 AMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMID 238

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G    G L+    LRD+M+  G KPNVVT N L++G C+   +++ R L D+++   + P
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLP 298

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
              TY+ L D   + G      ++    L +GV+    T + L+ GL ++G V     ++
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             LV+ G+      YN L+   C+    + A S+ ++   M+     P+ +TYN LI G 
Sbjct: 359 EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQ---MKSRHIRPDHITYNALINGL 415

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           C+   + +A  L+ E+ + G+ P+  T+  +     R   +EK F
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 5/178 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           PS+ + N L+++    GR  D  A    ++  G  PD   +N  +      G+++    +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 422 MNEL--VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +  +            +YN+++  L + GK   A+ + DEM         PN +TYN +I
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD---RGVAPNQITYNTMI 237

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + G LE    L +++L+ G  PN  TY ++   +   G + +    M  ++  S
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ +S + + V      S S +F A+     +L  +  +  
Sbjct: 3   HTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFS 62

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++       +C ++L  L+K   F+ V   YKE+   
Sbjct: 63  GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILEC 122

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY + G + + 
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 182

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  I  A ++F+EM   G+    VT+ +L
Sbjct: 183 FRLKSA---MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTL 239

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L  +++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 240 IDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGL 299

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 300 KPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEK 359

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G       LL E   M+++   P++VT
Sbjct: 360 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGHVPSVVT 410



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 116 YKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIR 175

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ ++GL P+ +T
Sbjct: 176 LGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVT 235

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +  D+ TYN LI GL ++G+++  +N+++E+ 
Sbjct: 236 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMR 295

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A    +   +M +E    + V Y  LI G CQ+G
Sbjct: 296 MKGLKPDKITYTTLIDGCCKEGDLETA---FEHRKRMIQENIRLDDVVYTTLISGLCQEG 352

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 353 RSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 387


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 221/414 (53%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  +  + + ++  G+ P VV++N L++GY ++G + K 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F EM   G+    VT+ +L
Sbjct: 191 FRLKSA---MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +GK+D A+ +  +M++  L P+++T N LI G CKK  +++AR L +++S +GL
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CK+G +E AF  R  M++  +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGHVPSVVT 418



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 163/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  I  +  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LD+   L+  M ASG++P+V T + LING CK+  +++A  LF ++ ++GL P+ +T
Sbjct: 184 QGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G+++ A  +   ML + + PD+ TYN LI GL ++G+++  RN++NE+ 
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CKDG        L+  F+  K     NI    V Y  LI G 
Sbjct: 304 MKGLKPDKITYTTLIDGSCKDGD-------LETAFEYRKRMIEENIRLDDVAYTALISGL 356

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKG 395



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK+G I     + +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEI---RLSQSVFDAIRKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+DEA  L  EM+  GL P
Sbjct: 180 GYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M  +G+ PD  TY  LI G  ++G++E        ++   +R   V Y  L+  LC++
Sbjct: 300 NEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 230/467 (49%), Gaps = 25/467 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTCSDSLCRNSIIIDML 122
           +  H ++ +   P + SF H+     K    S +F+      LS  S   C  +I+++ L
Sbjct: 82  QFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCL 141

Query: 123 MLAYVKNMKPHLGFEA--FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
               V  +   L   A   +R    G    +++   L++ L  E +      ++  M++ 
Sbjct: 142 --CNVNRVGEGLAVMAGILRR----GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL 195

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDM------KSLGVSPKVVTYNILIDGYCKK 234
               N  ++  ++ GLC+ G ++ A  + ++M        +   P V++Y+I+ID  CK 
Sbjct: 196 GCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKD 255

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               +  +A  +F++M   G+ P  +++ +LI GFC       A ++F EM + G+   V
Sbjct: 256 R---REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNV 312

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+N LI+ LC +GK+ EA  L + M+  G+ PN++T N+LI GFC    +  AR LF  
Sbjct: 313 VTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 372

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P VI Y  LI+ YCK  ++E+A  + N ML  G  PDV TY  L+ GL + G 
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V   + +   +   G+   L  Y I +  LCK+G   +A+ L +   K++      +I  
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN---KLKSYNIKLDIEC 489

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +N LI G C+ GKLE A  L  +L ++ L P+  TY I+  E    G
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGG 536



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 204/367 (55%), Gaps = 8/367 (2%)

Query: 137 EAFKRAGDYGL--KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           E    +  YG+  K  V+S + ++ AL K+ + ++   +++EMK + +   + S+  +++
Sbjct: 226 EMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIH 285

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  GK  +A  +  +M + GV P VVT+N+LID  CK+G   K+ +A  + + M++ G
Sbjct: 286 GFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG---KVIEAKDLLEVMIQRG 342

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+PN +T+N+LI+GFC   ++++A ++F  M S G    V+ Y  LING C   K++EA+
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L + M+  G +P+V T  AL+ G  +   V  A+ LF  +   G+   +  Y   ++  
Sbjct: 403 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGL 462

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G + +A  + N +    +  D+  +NCLI GL + G +E    +  +L    ++  +
Sbjct: 463 CKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 522

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYNI++   C+ G+  KA  L     KMEK    P+ +TY  LI+GF +  KLE    L
Sbjct: 523 VTYNIMIHEFCRGGQVVKANILFQ---KMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 579

Query: 495 LNELLEK 501
           L+ ++++
Sbjct: 580 LHMMVQR 586



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L SF  +L+GL K    ++   +   M+  G+SP   T NIL++  C    +G+     A
Sbjct: 96  LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGE---GLA 152

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V   ++  G +P+ VT+ TLI G C +  IS A  +F  M   G     +TY +L+ GLC
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212

Query: 306 VDGKLDEAVALRDEMMASG------LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
             G +  A+ L  EM+          KP V++ + +I+  CK +  ++AR LF+++  QG
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           ++P+VI+Y +LI  +C  G+ E+A  + N M+++GV P+V T+N LI  L +EG V   +
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 332

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +++  ++  G+   L+TYN L+   C  G    A  L      M  +   P+++ Y VLI
Sbjct: 333 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF---VSMPSKGCEPDVICYTVLI 389

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            G+C+  K+E+A  L N +L+ G  P+  TY  +   + + G + D
Sbjct: 390 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGD 435



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 7/347 (2%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SIIID    A  K+ +     + F+     G+  +V+S   L+      GK+E+ + ++ 
Sbjct: 246 SIIID----ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EM  + ++ N+ +FN +++ LCK GK+ +A D++E M   G+ P ++TYN LI+G+C   
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL-- 359

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +G +  A  +F  M   G  P+ + +  LI+G+CK   +  AMK++  M   G    V 
Sbjct: 360 -VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY +L+ GL   GK+ +A  L   M   G+  ++      +NG CK   + +A  LF+ +
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 478

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
               +   +  +N LID  CK G++E A+ +   +    + PDV TYN +I    R G V
Sbjct: 479 KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 538

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
                +  ++  NG     +TY  L+    +  K +K V LL  M +
Sbjct: 539 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 32/294 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ +V++ N L+  L KEGK  + + + + M +R I  NL ++N ++ G C 
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
            G LN A ++   M S G  P V+ Y +LI+GYCK   +                     
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 238 -----------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                      GK+  A  +F  M   GI  +   +   ++G CK+  +  AM++F ++ 
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S+ I   +  +N LI+GLC  GKL+ A  L +++    L+P+VVT N +I+ FC+   V 
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           KA +LF  + + G +P  ITY TLI  + +  ++E    + + M+ R V  DV+
Sbjct: 540 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 5/151 (3%)

Query: 375 CKEGRME--DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           CK G +    AF   + M+     P +S++  L++GL++  +   V  + N++  +G+  
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              T NIL+  LC   +  + ++++  +    +    P+IVTY  LIKG C + ++  A 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGIL---RRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            L   + + G  PN  TY  + + +   G I
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 205/396 (51%), Gaps = 41/396 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  K+E V  +++ ++   I  +L SF  +++  C+  +L+ A   +
Sbjct: 78  SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L++G+C    + + Y+A ++   +V  G  PN V +NT+ID  
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCH---VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN---------------------GLCVD- 307
           C+   ++ A+ V + M   GI   VVTYNSLI                      G+  D 
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254

Query: 308 -------------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                        G+L EA    +EM+   + PN+VT N+LING C   L+++A+ + + 
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P+ +TYNTLI+ YCK  R++D   +   M   GV  D  TYN L  G  + G 
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                 ++  +V+ G+   + T+NIL+  LC  GK  KA+  L+++   +K K    I+T
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL---QKSKTVVGIIT 431

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           YN++IKG C+  K+EDA  L   L  KG+ P+  TY
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 227/464 (48%), Gaps = 34/464 (7%)

Query: 47  LRYFCWSTKELRASH---SLLLTGRLLHSLVVAKKYPKIRS-FLHMFVKNGKFTSVSTIF 102
           L  FC    ++  SH   S++   RLL ++    KY  + S F H+     +   +S   
Sbjct: 64  LTLFC----DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-----EMLGISHDL 114

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
           ++ +T  D  CR +              +  L      +    G + S+++   L+    
Sbjct: 115 YSFTTLIDCFCRCA--------------RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
              +F +   +  ++     E N+  +N +++ LC+ G++N A D+++ MK +G+ P VV
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYN LI      G  G    +  +  DM+  GI P+ +TF+ LID + K+  +  A K +
Sbjct: 221 TYNSLITRLFHSGTWGV---SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM    +   +VTYNSLINGLC+ G LDEA  + + +++ G  PN VT N LING+CK 
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           K V+    +   +S  G+     TYNTL   YC+ G+   A  +   M+  GV PD+ T+
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N L+ GL   G +      + +L  +    G++TYNI++  LCK  K + A  L      
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF---CS 454

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL-EKGLIP 505
           +  +   P+++TY  ++ G  +K    +A+ L  ++  E GL+P
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 191/367 (52%), Gaps = 8/367 (2%)

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           LR+ +   KF D   ++ +M       ++  F+ +L  + K  K      +   ++ LG+
Sbjct: 51  LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           S  + ++  LID +C+     ++  A +    M++ G  P+ VTF +L++GFC       
Sbjct: 111 SHDLYSFTTLIDCFCR---CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           AM + +++   G    VV YN++I+ LC  G+++ A+ +   M   G++P+VVT N+LI 
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227

Query: 338 G-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             F        AR+L  D+   G+SP VIT++ LID Y KEG++ +A    N M+ R V 
Sbjct: 228 RLFHSGTWGVSARIL-SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P++ TYN LI GL   G ++  + ++N LV+ G     VTYN L+   CK  +    + +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
           L     M ++    +  TYN L +G+CQ GK   A  +L  ++  G+ P+  T+ I+ + 
Sbjct: 347 L---CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403

Query: 517 MMEKGFI 523
           + + G I
Sbjct: 404 LCDHGKI 410



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +  DA  +   M +   LP +  ++ L+  +++    E V ++   L   G+   L ++ 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   C+  +   A+S L +M K+  E   P+IVT+  L+ GFC   +  +A  L++++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFE---PSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIP---DIEGHM 530
           +  G  PN   Y  + + + EKG +    D+  HM
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 205/371 (55%), Gaps = 9/371 (2%)

Query: 132 PHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           P L      F++A D G  S   + N L+  LV+    E     Y++M      +N  S 
Sbjct: 52  PQLKNAVSVFQQAVDSG-GSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSL 110

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + +L    +  K   A  ++  M   G +  V  YNIL+ G C+    GK   A ++ ++
Sbjct: 111 SGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGK---AVSLLRE 167

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M +N ++P+ V++NT+I GFC+ + +  A+++  EM   G +  +VT+  LI+  C  GK
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +DEA+ L  EM   GL+ +++   +LI GFC    +++ + LFD++ E+G SP  ITYNT
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI  +CK GR+++A  +   M++RGV P+V TY  LI GL   G  +    ++N ++   
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               +VTYNI++  LCKD     A+ +++    M+K +  P+ +TYN L+ G C KG L+
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVE---LMKKRRTRPDNITYNSLLGGLCAKGDLD 404

Query: 490 DANGLLNELLE 500
           +A+ LL  +L+
Sbjct: 405 EASKLLYLMLK 415



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 230/461 (49%), Gaps = 13/461 (2%)

Query: 64  LLTGRLLHSLV--VAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           LL+ RL   LV   ++   K+RS       N +  +  ++F        SL   S   + 
Sbjct: 23  LLSQRLCSKLVNTFSETETKLRSLCE--DSNPQLKNAVSVFQQAVDSGGSL---SFAGNN 77

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM   V++    + F  +++  +     + +S + LL   V+  K      V   M +R 
Sbjct: 78  LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRG 137

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-M 240
              N+ ++N +L GLC+  +  KA  ++ +M+   + P VV+YN +I G+C+    GK +
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCE----GKEL 193

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA  +  +M  +G   + VT+  LID FCK   +  AM + +EM   G+ A ++ Y SL
Sbjct: 194 EKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSL 253

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I G C  G+LD   AL DE++  G  P  +T N LI GFCK   +++A  +F+ + E+G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P+V TY  LID  C  G+ ++A  + N ML +   P+V TYN +I  L ++  V     
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALE 373

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           I+  +     R   +TYN L+G LC  G   +A  LL  M K +     P+++++N LI 
Sbjct: 374 IVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLK-DSSYTDPDVISFNALIH 432

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C+  +L  A  + + L+EK    +  T  I+    ++ G
Sbjct: 433 GLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 220/422 (52%), Gaps = 12/422 (2%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S CS SL    I+ID    A+ K  K        K     GL++ ++    L+R     G
Sbjct: 206 SGCSWSLVTWGILID----AFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           + +  + ++ E+  R       ++N ++ G CK G+L +AS+I E M   GV P V TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYT 321

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LIDG C   G+GK  +A  +   M++    PN VT+N +I+  CKD  ++ A+++ E M
Sbjct: 322 GLIDGLC---GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELM 378

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM--ASGLKPNVVTSNALINGFCKKK 343
                    +TYNSL+ GLC  G LDEA  L   M+  +S   P+V++ NALI+G CK  
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            + +A  ++D + E+  +  ++T N L+++  K G +  A  +   + +  ++P+  TY 
Sbjct: 439 RLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYT 498

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I G  + G +   + ++ ++  + +   +  YN L+ +LCK G   +A  L +E   M
Sbjct: 499 TMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE---M 555

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +++  +P+++++N++I G  + G ++ A  LL  +   GL P+  TY  +    ++ G++
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615

Query: 524 PD 525
            +
Sbjct: 616 DE 617



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 215/457 (47%), Gaps = 18/457 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  F   G+      +F  +    DS C  +I  + L+  + K  +     E F+   
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPC--AITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V +   L+  L   GK ++   +   M ++  E N+ ++N ++N LCK   + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------ADAVFKDMVENGILP 257
            A +I+E MK     P  +TYN L+ G C KG + +  K       D+ + D       P
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD-------P 422

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + ++FN LI G CK   +  A+ +++ +     A  +VT N L+N     G +++A+ L 
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            ++  S + PN  T   +I+GFCK  ++  A+ L   +    L PSV  YN L+ + CK+
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A+ +   M      PDV ++N +I G  + G+++   +++  + + G+   L TY
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + L+    K G   +A+S  D+M     E   P+    + ++K    +G+ +     + +
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFE---PDAHICDSVLKYCISQGETDKLTEFVKK 659

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           L++K ++ ++     V + M       DI   +  ++
Sbjct: 660 LVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVA 696



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI---AGLSREGNVEGVRNIMNE 424
           N L+    +    E AF+    ML+     +  + + L+     + + G   GV  +M  
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALM-- 133

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            +  G    +  YNIL+  LC++ +  KAVSLL EM    +    P++V+YN +I+GFC+
Sbjct: 134 -LKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM---RQNSLMPDVVSYNTVIRGFCE 189

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             +LE A  L NE+   G   +  T+ I+ +   + G + +  G
Sbjct: 190 GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 203/422 (48%), Gaps = 41/422 (9%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            ++   + G +G   ++   N L+ AL K    +  E +YK M    + LN  +++ +++
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK G L+ A      M   G+   +  YN LI+G+CK    G +  A+ ++  M+  G
Sbjct: 402 SFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCK---FGDLSAAEFLYTKMINEG 458

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P   TF TLI G+CKD  +  A K++ EM    IA  V T+ +LI GLC   ++ EA 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID-- 372
            L DEM+   +KP  VT N +I G+CK   ++KA  L +D+   GL P   TY  LI   
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 373 ---------------------------------AYCKEGRMEDAFAMRNSMLDRGVLPDV 399
                                             YC +GR+ +A +    M+ RG+  D+
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             +  LI G  ++ +++ +  ++ ++ + G+R   V Y  ++ A  K+G  KK+   LD 
Sbjct: 639 VCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDL 698

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M     EK +PN+VTY   + G C+ G+++ A  L  ++L   + PN  TY    + + +
Sbjct: 699 MV---TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 520 KG 521
           +G
Sbjct: 756 EG 757



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 202/376 (53%), Gaps = 7/376 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+ +  +   L+    K+ + E    +Y+EM  + I  ++ +F  ++ GLC   ++ +A
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S + ++M    + P  VTYN++I+GYCK   + K ++   + +DM+ NG++P+  T+  L
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFE---LLEDMLHNGLVPDTYTYRPL 574

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C    +SAA    +++    +    + Y++L++G C  G+L EA++   EM+  G+
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             ++V    LI+G  K++ +++   L   + +QGL P  + Y ++IDAY KEG  + +  
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M+     P+V TY   + GL + G ++   ++  +++   +    VTY   + +L 
Sbjct: 695 CLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLT 754

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G  K+A  L  EM K        N  TYN+LI+GFC+ G+L +A  +L+E+ E G+ P
Sbjct: 755 KEGNMKEATDLHHEMLK----GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810

Query: 506 NQTTYQIVREEMMEKG 521
           +  TY  +  E    G
Sbjct: 811 DCITYSTIIYEHCRSG 826



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 260/554 (46%), Gaps = 37/554 (6%)

Query: 9   IEDITELIRNHHWSKLKNTDPNT--------VILQLFNSDADPVLILRYFCWSTKELRAS 60
           I  I++++R +   K+   DP+         V   L N+  D  L LR+F +       +
Sbjct: 34  ITHISDIVRGNLSWKIAFNDPSISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMN 93

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG---KFTSVSTIFHALSTCSDSLCRNSI 117
           H+      L+H+LV  K +    S LH  +  G   KF        +   C  S   +++
Sbjct: 94  HTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFV-FEKFLESHKQCKFS---STL 149

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
             D L+ +Y++N +        +      L   V + + +L  L++  KF  V  V+ E 
Sbjct: 150 GFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDES 209

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               ++ +  + + V+  LC+     +A + +  M+S      +VTYN+LI G CK GG+
Sbjct: 210 VNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGV 269

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
               +A  V K + E G+  + VT+ TL+ GFC+ +     + +  EM   G        
Sbjct: 270 ---LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAV 326

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           + L++GL   G +D A  L  ++   G  PN+   NALIN  CK + ++KA +L+ ++  
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHS 386

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
             L  + +TY+ LID++CK G ++ A +    M++ G+   +  YN LI G  + G++  
Sbjct: 387 MNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSA 446

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  +++N G+     T+  L+   CKD + +KA  L  EM   EKE   P++ T+  
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM--NEKEIA-PSVYTFTA 503

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           LI G C   ++ +A+ L +E++E+ + P + TY +                + E+M+  G
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 522 FIPDIEGHMYNISG 535
            +PD   +   ISG
Sbjct: 564 LVPDTYTYRPLISG 577



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 224/473 (47%), Gaps = 39/473 (8%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           GR++   +    YP   S ++   K G  ++   ++  +   ++ L   +     L+  Y
Sbjct: 417 GRMIEDGIRETIYP-YNSLINGHCKFGDLSAAEFLYTKM--INEGLEPTATTFTTLISGY 473

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K+++    F+ ++   +  +  SV +   L+  L    +  +   ++ EM  R+I+   
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
            ++N ++ G CKA  ++KA +++EDM   G+ P   TY  LI G C  G           
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 236 ---------------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
                                G G++ +A +   +M++ GI  + V    LIDG  K ++
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +     + ++M   G+    V Y S+I+    +G   ++    D M+     PNVVT  A
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTA 713

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            +NG CK   +++A  LF+ +    +SP+ +TY   +D+  KEG M++A  + + ML +G
Sbjct: 714 FMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KG 772

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +L + +TYN LI G  + G +     +++E+  NG+    +TY+ ++   C+ G    AV
Sbjct: 773 LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAV 832

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            L D M +   E   P+ V +N+LI G C  G L+ A  L N++L +GL P Q
Sbjct: 833 ELWDTMLRKGVE---PDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 15/325 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           LK + +  + LL     +G+  +      EM +R I ++L     +++G  K   + +  
Sbjct: 599 LKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLF 658

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +++ M   G+ P  V Y  +ID Y K+G   K   +      MV     PN VT+   +
Sbjct: 659 GLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKK---SGECLDLMVTEKCFPNVVTYTAFM 715

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G CK   I  A  +FE+M +  I+   VTY   ++ L  +G + EA  L  EM+  GL 
Sbjct: 716 NGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLL 774

Query: 327 PNVVTSNALINGFCK-KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            N  T N LI GFCK  +L+E  +VL  +++E G+ P  ITY+T+I  +C+ G +  A  
Sbjct: 775 ANTATYNILIRGFCKLGRLIEATKVL-SEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA---------GLVT 436
           + ++ML +GV PD   +N LI G    G ++    + N++++ G++           L  
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGV 893

Query: 437 YNILVGALCKDGKSKKAVSLLDEMF 461
            N L+   C  G+   A+ L   M 
Sbjct: 894 CNFLMHGGCVTGEVDTALRLYHSML 918



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 31/339 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCR--------NSIIIDMLMLAYVKNMKPHLG 135
           + LH +   G+ T       ALS   + + R        ++++ID  M    ++MK   G
Sbjct: 608 ALLHGYCGQGRLTE------ALSASCEMIQRGINMDLVCHAVLIDGAMKQ--QDMKRLFG 659

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
               K+  D GL+   +    ++ A  KEG F+        M   +   N+ ++   +NG
Sbjct: 660 L--LKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCK G++++A  + E M +  +SP  VTY   +D   K+G    M +A  +  +M++ G+
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGN---MKEATDLHHEMLK-GL 773

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           L N  T+N LI GFCK   +  A KV  EM  +GI    +TY+++I   C  G +  AV 
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI---------T 366
           L D M+  G++P+ V  N LI G C    ++KA  L +D+  +GL P  I          
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGV 893

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            N L+   C  G ++ A  + +SML R V   +  + CL
Sbjct: 894 CNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 257/566 (45%), Gaps = 66/566 (11%)

Query: 11  DITELIRNHHWSK---LKNTDPN---TVILQLFNSDADPVLILRYFCWSTKELRASHSLL 64
            I  ++    W K   LK   P+   +++  LFN + DP+  L +F W  +     HSL 
Sbjct: 28  QIFTILSRPRWRKDPSLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLA 87

Query: 65  LTGRLL----------------HSLVVAKKYPKIRSFL-----------------HMFVK 91
               LL                +S++ +   P   +FL                 H    
Sbjct: 88  THHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAF 147

Query: 92  NGKFTSVSTIFHALSTCS-----------------DSLCRNSIIIDMLMLAYVKNMKPHL 134
               TS + +   LS  S                 +S+  N I ++ ++ +Y K     +
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F R         + +   L+    +    E    V+  M RR    N  S+  +++
Sbjct: 208 ARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIH 263

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC+AGKL++A +    M+  G  P V TY +L+   C+ G   +  +A ++F +M E G
Sbjct: 264 GLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESG---RELEALSLFGEMRERG 320

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  T+  LID  CK+  +  A+K+  EM   G+A  VV +N+LI   C  G +++AV
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +   M +  + PNV T N LI GFC+ K +++A  L + + E  LSP V+TYNTLI   
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C+ G ++ A  +   M+  G  PD  T+N  +  L R G V     I+  L    ++A  
Sbjct: 441 CEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANE 500

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             Y  L+   CK GK + A SL   M     E+  PN +T+NV+I G  ++GK++DA  L
Sbjct: 501 HAYTALIDGYCKAGKIEHAASLFKRML---AEECLPNSITFNVMIDGLRKEGKVQDAMLL 557

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEK 520
           + ++ +  + P   TY I+ EE++++
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKE 583



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN++    L+    +  K H   E + R  + G   +V +   L+ AL + G+  +   +
Sbjct: 253 RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSL 312

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           + EM+ R  E N+ ++  +++ LCK G++++A  ++ +M   GV+P VV +N LI  YCK
Sbjct: 313 FGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK 372

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G    M  A  V   M    + PN  T+N LI GFC+ +++  AM +  +M    ++  
Sbjct: 373 RG---MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTYN+LI+GLC  G +D A  L   M+  G  P+  T NA +   C+   V +A  + +
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + E+ +  +   Y  LID YCK G++E A ++   ML    LP+  T+N +I GL +EG
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V+    ++ ++    ++  L TYNILV  + K+    +A  +L+ +     +   PN+V
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ---PNVV 606

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           TY   IK +C +G+LE+A  ++ ++  +G++ +   Y ++       G +    G +  +
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM 666

Query: 534 SGT 536
            GT
Sbjct: 667 FGT 669



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 197/380 (51%), Gaps = 6/380 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + + +S   L+  L + GK  +    +  M+       + ++  ++  LC++G+  +A  
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +  +M+  G  P V TY +LID  CK+   G+M +A  +  +MVE G+ P+ V FN LI 
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKE---GRMDEALKMLNEMVEKGVAPSVVPFNALIG 368

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
            +CK   +  A+ V   M S  +   V TYN LI G C    +D A+AL ++M+ S L P
Sbjct: 369 SYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSP 428

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VVT N LI+G C+  +V+ A  LF  +   G SP   T+N  +   C+ GR+ +A  + 
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL 488

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            S+ ++ V  +   Y  LI G  + G +E   ++   ++        +T+N+++  L K+
Sbjct: 489 ESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK + A+ L+++M K + +   P + TYN+L++   ++   + AN +LN L+  G  PN 
Sbjct: 549 GKVQDAMLLVEDMAKFDVK---PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605

Query: 508 TTYQIVREEMMEKGFIPDIE 527
            TY    +    +G + + E
Sbjct: 606 VTYTAFIKAYCSQGRLEEAE 625



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 189/403 (46%), Gaps = 14/403 (3%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +C N    + L+  + +            +  +  L   V++ N L+  L + G  +
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +++ M R     +  +FN  +  LC+ G++ +A  I+E +K   V      Y  LI
Sbjct: 448 SASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           DGYCK    GK+  A ++FK M+    LPN +TFN +IDG  K+  +  AM + E+M   
Sbjct: 508 DGYCKA---GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
            +   + TYN L+  +  +   D A  + + +++SG +PNVVT  A I  +C +  +E+A
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +   I  +G+      YN LI+AY   G ++ AF +   M   G  P   TY+ L+  
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKH 684

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEK 467
           L  E + +   N +      G+   L   NI V     D  SK    +   +F KM +  
Sbjct: 685 LVIEKHKKEGSNPV------GLDVSLT--NISVDN--TDIWSKIDFGITTVLFEKMAECG 734

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             PN+ TY+ LI G C+ G+L  A  L + + E G+ P++  +
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 175/388 (45%), Gaps = 35/388 (9%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y K  K       FKR        + ++ N ++  L KEGK +D   + ++M +  
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           ++  L ++N ++  + K    ++A++I+  + S G  P VVTY   I  YC +G   ++ 
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG---RLE 622

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A+ +   +   G+L +   +N LI+ +     + +A  V   M   G     +TY+ L+
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682

Query: 302 NGLCVD---------------------------GKLDEAVA--LRDEMMASGLKPNVVTS 332
             L ++                            K+D  +   L ++M   G  PN+ T 
Sbjct: 683 KHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTY 742

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + LING CK   +  A  L+  + E G+SPS I +N+L+ + CK G   +A  + +SM++
Sbjct: 743 SKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
              L  + +Y  LI GL  + N E    +   L+  G     V + +L+  L K G   +
Sbjct: 803 CSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQ 862

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
              LL+    MEK     +  TY++L++
Sbjct: 863 CSELLN---LMEKNGCRLHPETYSMLMQ 887



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 19/291 (6%)

Query: 243 ADAVFKDMVENGILPNEVTF--NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A+ V   M+++   P++ TF  N L         ++ A    +          + +YN L
Sbjct: 105 AENVRNSMIKSCTSPHDATFLLNLL-------RRMNTAAAAADHQHQLAFKLSLTSYNRL 157

Query: 301 INGLCVDGKLDEAVALRDEMMA---SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           +  L     +DE ++L  EM+    + + PN++T N ++N +CK   +  AR+ F  I  
Sbjct: 158 LMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILR 217

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
               P + TY +L+  YC+   +E A  +   M  R  +    +Y  LI GL   G +  
Sbjct: 218 CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNLIHGLCEAGKLHE 273

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
                  +  +G    + TY +LV ALC+ G+  +A+SL  EM +   E   PN+ TY V
Sbjct: 274 ALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCE---PNVYTYTV 330

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           LI   C++G++++A  +LNE++EKG+ P+   +  +     ++G + D  G
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVG 381



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 26/301 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E   R    G + +V++    ++A   +G+ E+ E +  ++K   + L+   +N ++N  
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY 650

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNIL-----IDGYCKKGG--IGK---------- 239
              G L+ A  ++  M   G  P  +TY+IL     I+ + K+G   +G           
Sbjct: 651 GCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710

Query: 240 ----MYKAD-----AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                 K D      +F+ M E G +PN  T++ LI+G CK   ++ A  ++  M   GI
Sbjct: 711 NTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGI 770

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           +   + +NSL++  C  G   EAV L D MM      ++ +   LI G  ++   EKA  
Sbjct: 771 SPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEA 830

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +F  +   G +   + +  LID   K G ++    + N M   G      TY+ L+  L+
Sbjct: 831 VFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELN 890

Query: 411 R 411
           R
Sbjct: 891 R 891


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 225/455 (49%), Gaps = 40/455 (8%)

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQ 156
           FH   + S  +    I  D+     + N   HLG     F    +    G     ++   
Sbjct: 80  FHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITT 139

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L++ L   GK  +  + + ++  +   L+  S+  ++NGLCK G+   A  ++  +  L 
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199

Query: 217 VSPKVVTYNILIDGYCKKG--------------------------------GIGKMYKAD 244
           V P VV YN +ID  CK                                   +G++ +A 
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +F  M+   I P+  TFN L+DG CK+  +  A  V   M   G+ + +VTYNSL++G 
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            +  + ++A  + + M   G+ P+V + + +ING CK K+V++A  LF ++  + ++P+ 
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TYN+LID   K GR+ DA+ + N M +RG   DV TY+ L+  L +   V+    ++ +
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITK 439

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           + + G++  + TY ILV  LCK+G+ K A ++  ++     +    ++  YNV++ G C+
Sbjct: 440 IKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL---IKGYHLDVKMYNVMVNGLCK 496

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           +G  ++A  L++++ + G IP+  TY+ +   + E
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFE 531



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 213/439 (48%), Gaps = 70/439 (15%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +   N++L +LVK   F       K+M+ ++I+ +L +FN ++N  C  G LN A  ++ 
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGG-----------IGKMYKADAVFKDMVENG----- 254
            +  LG  P  VT   LI G C  G            I K +  D V    + NG     
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 255 ----------------ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
                           + PN V +NT+ID  CKD+ +  A  +  EM    I   VVTY 
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI G  + G+L EAV L ++M+   +KP+V T N L++G CK+  ++KAR +   + +Q
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS------------------ 400
           G+  +++TYN+L+D Y    +   A  + N+M  RGV PDV                   
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 401 -----------------TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                            TYN LI GL + G +    +++NE+ N G  A ++TY+ L+ A
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK+ +  KA++L+    K++ +   PNI TY +L+ G C+ G+L+DA  +  +LL KG 
Sbjct: 424 LCKNHQVDKAITLIT---KIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 504 IPNQTTYQIVREEMMEKGF 522
             +   Y ++   + ++G 
Sbjct: 481 HLDVKMYNVMVNGLCKEGL 499



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 201/358 (56%), Gaps = 23/358 (6%)

Query: 106 STCSDSLCRNSIII---DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
           +T  DSLC++ ++I   D+     VK + P                  V++   L+   +
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFP-----------------DVVTYTTLIYGCL 250

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
             G+ ++   ++ +M  + I+ ++ +FN +++GLCK G++ KA +++  M   GV   +V
Sbjct: 251 IVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIV 310

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TYN L+DGY     + +  KA  VF  M   G+ P+  +++ +I+G CK + +  A+ +F
Sbjct: 311 TYNSLMDGYFL---VKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM S  +A   VTYNSLI+GL   G++ +A  L +EM   G   +V+T ++L++  CK 
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V+KA  L   I +QG+ P++ TY  L+D  CK GR++DA A+   +L +G   DV  Y
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           N ++ GL +EG  +   ++++++ +NG     VTY  LV AL ++ K+ KAV LL EM
Sbjct: 488 NVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 195/356 (54%), Gaps = 6/356 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           ++ +V+  N ++ +L K+        +  EM  +RI  ++ ++  ++ G    G+L +A 
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M    + P V T+NIL+DG CK+G   +M KA  V   M++ G+  N VT+N+L+
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEG---EMKKARNVLAVMIKQGVDSNIVTYNSLM 316

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG+   +  + A  VF  M   G+   V +Y+ +INGLC    +DEAV L  EM +  + 
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN VT N+LI+G  K   +  A  L +++  +G    VITY++L+DA CK  +++ A  +
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              + D+G+ P++ TY  L+ GL + G ++  + +  +L+  G    +  YN++V  LCK
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +G   +A+SL+    KME     P+ VTY  L++   +  K + A  LL E++ +G
Sbjct: 497 EGLFDEALSLVS---KMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 178/339 (52%), Gaps = 11/339 (3%)

Query: 101 IFHALSTCSDSLCRNSI--IIDMLMLAY----VKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
           + HA   CS+ + +     ++    L Y    V  +K  +G   F +     +K  V + 
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL--FNQMLLKNIKPDVYTF 277

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L KEG+ +    V   M ++ ++ N+ ++N +++G     + NKA+ +   M  
Sbjct: 278 NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMAR 337

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P V +Y+I+I+G CK   + +   A  +FK+M    + PN VT+N+LIDG  K   
Sbjct: 338 RGVTPDVQSYSIMINGLCKTKMVDE---AVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           IS A  +  EM + G  A V+TY+SL++ LC + ++D+A+ L  ++   G++PN+ T   
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK   ++ A+ ++ D+  +G    V  YN +++  CKEG  ++A ++ + M D G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            +PD  TY  L+  L      +    ++ E++  G   G
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVG 553



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 54/315 (17%)

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +   + A +  K M    I P+  TFN LI+ FC   +++ A  V  ++   G     VT
Sbjct: 77  LNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVT 136

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
             +LI GLC++GK+ EA+   D+++A G   + V+   LING CK      A  +   I 
Sbjct: 137 ITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKID 196

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
              + P+V+ YNT+ID+ CK+  +  A  + + M+ + + PDV TY  LI G        
Sbjct: 197 GLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC------- 249

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
                                 ++VG L      K+AV L ++M  + K  K P++ T+N
Sbjct: 250 ----------------------LIVGRL------KEAVGLFNQM--LLKNIK-PDVYTFN 278

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------IVREE---------MMEK 520
           +L+ G C++G+++ A  +L  ++++G+  N  TY        +V++E         M  +
Sbjct: 279 ILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARR 338

Query: 521 GFIPDIEGHMYNISG 535
           G  PD++ +   I+G
Sbjct: 339 GVTPDVQSYSIMING 353



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 380 MEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++DA +  N +L  R  +  +  +N +++ L +  +     +   ++    ++  L T+N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+   C  G    A S+L ++FK+      P+ VT   LIKG C  GK+ +A    +++
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFH---PDTVTITTLIKGLCLNGKVREALHFHDDV 160

Query: 499 LEKGLIPNQTTY 510
           + KG   +Q +Y
Sbjct: 161 IAKGFHLDQVSY 172


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 234/479 (48%), Gaps = 7/479 (1%)

Query: 34  LQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG 93
           L L N   +P   L +F  ++K+ +    +    +++H L  A+ Y ++R +L+  V   
Sbjct: 103 LVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLC 162

Query: 94  KFTSV-STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           K   + S ++  L +       +  + DM++  + +          F   G  G   S+ 
Sbjct: 163 KNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLR 222

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN LL  LV+ G+      VY++M    I  ++ S+  ++N  CK G++++A + +++M
Sbjct: 223 SCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM 282

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +     P VVTYN LIDGY     +G +  A  V   M E GI  N  T+  LI G+CK 
Sbjct: 283 ERSCCEPNVVTYNSLIDGYV---SLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A K+   M    +      Y  LI+  C  G++D+A+ +RD M+  GLK N V  
Sbjct: 340 GQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVIC 399

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N+LING+CK   V KA  +   + +  L P    YNTL+D +CK+     AF + + M +
Sbjct: 400 NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHN 459

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +GV   V TYN L+  L   G+VE   +I N +   G+    VTY  L+ A  K G   +
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           A+ +  +       K   +I  YN +I GFC+  KL  A  +  ++ E G  P++ TY+
Sbjct: 520 AMMIWKDALSKGFTK---SITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYR 575



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 197/417 (47%), Gaps = 78/417 (18%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL A  K G F+    ++K+   +    ++  +N ++ G CK  KL +A +I   MK LG
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE------------------------ 252
             P  +TY  LIDGYCK G + +  K     KDM E                        
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALK----LKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 253 ---NGIL---------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
              NG+L         PN VT+ +LI G+C    +  A   + +M   GIA  ++  + +
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKI 682

Query: 301 INGLCVDGKLDEA------VALRDEMMA---------SGLK------------------- 326
           ++ L   GK+DEA      +A  D + A         S L+                   
Sbjct: 683 VSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIP 742

Query: 327 -PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N +  N  I G CK K ++  R +  D+  +G  P   TY +LI A    G++ +AF 
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +R+ M++ G++P++  YN LI GL + GN++  R + N+L   G+   +VTYN L+   C
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           K G++ +A+ L D   KM +E   P+ +TY+ LI G   +GK E + GLLNE+++ G
Sbjct: 863 KGGRTTEALELKD---KMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 207/430 (48%), Gaps = 57/430 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++ N LL+ L   G  E   +++  M +R +  N  ++  +L+   K G  ++A
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I +D  S G +  +  YN +I G+CK   + K+ +A  +F  M E G  P+E+T+ TL
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCK---MEKLVQAQEIFLKMKELGFPPDEITYRTL 577

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+CK  N+  A+K+ +     GI++    YNSLI G+    +L +   L  EM    L
Sbjct: 578 IDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNREL 637

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVVT  +LI G+C K +++KA   +  + ++G++P++I  + ++ +  + G++++A  
Sbjct: 638 SPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANL 697

Query: 386 MRNSMLD--------------RGVLPDVST---------------------YNCLIAGLS 410
           + + + D              +  L  + T                     YN  I GL 
Sbjct: 698 ILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLC 757

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           +  N++ VR I+++L+  G      TY  L+ A    GK  +A  L D+M         P
Sbjct: 758 KSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN---AGLVP 814

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           NIV YN LI G C+ G L+ A  L N+L  KGL P   TY                  ++
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELK 874

Query: 515 EEMMEKGFIP 524
           ++M E+G  P
Sbjct: 875 DKMREEGICP 884



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 225/472 (47%), Gaps = 27/472 (5%)

Query: 51  CWSTKELRASHSLL----LTGRLLHSLVVAKK------YPKIRSFLHMFVKNGKFTSVST 100
           C     LR+ +SLL      G    +L+V ++       P I S+  M     K   V  
Sbjct: 215 CGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDE 274

Query: 101 IFHALSTCSDSLCR------NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
            F+ +     S C       NS+I   + L  V   K  L   + K     G+  +  + 
Sbjct: 275 AFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEK-----GIPENSRTY 329

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
             L++   K G+ E  E +   M  + + ++   +  +++  C AG+++ A  I + M  
Sbjct: 330 TLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLK 389

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+    V  N LI+GYCK   +G + KA  V   M +  + P+   +NTL+DGFCK E+
Sbjct: 390 VGLKMNTVICNSLINGYCK---LGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A K+ +EM + G+   VVTYN+L+  L   G ++ A+ + + M   G+ PN VT   
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ F K    ++A +++ D   +G + S+  YNT+I  +CK  ++  A  +   M + G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD  TY  LI G  + GN+     + +    +G+ +    YN L+  + +  + +K  
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            LL EM   E     PN+VTY  LI G+C KG ++ A     ++++KG+ PN
Sbjct: 627 GLLAEMKNRELS---PNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 202/428 (47%), Gaps = 22/428 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++I + L+  Y K    +   E      D+ LK      N LL    K+  F     + 
Sbjct: 395 NTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLC 454

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + +   + ++N +L  L   G +  A  I   M   GV+P  VTY  L+D + K 
Sbjct: 455 DEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK- 513

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G   +A  ++KD +  G   +   +NT+I GFCK E +  A ++F +M   G     
Sbjct: 514 --VGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDE 571

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY +LI+G C  G L EA+ L+D     G+  +    N+LI G  + + ++K   L  +
Sbjct: 572 ITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + LSP+V+TY +LI  +C +G M+ A+     M+D+G+ P++   + +++ L R G 
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    I++++ +    A       L  +  +  +++K V   D   K        N + 
Sbjct: 692 IDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIV---DSFGKKAMSIPISNNIV 748

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMM 518
           YN+ I G C+   ++D   +L++LL KG  P+  TY                  +R++M+
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808

Query: 519 EKGFIPDI 526
             G +P+I
Sbjct: 809 NAGLVPNI 816



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 194/431 (45%), Gaps = 75/431 (17%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+H   VA       + L  F K G F     I+      S    ++  + + ++  + K
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK--DALSKGFTKSITLYNTMICGFCK 548

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K     E F +  + G     ++   L+    K G   +   +    +R  I  + + 
Sbjct: 549 MEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEM 608

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ G+ ++ +L K + ++ +MK+  +SP VVTY  LI G+C KG + K Y  +A FK
Sbjct: 609 YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAY--NAYFK 666

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAA------------------------------ 278
            M++ GI PN +  + ++    +   I  A                              
Sbjct: 667 -MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL 725

Query: 279 --MKVFEEMGSHGIAAGV---VTYNSLINGLC----VD---------------------- 307
              K+ +  G   ++  +   + YN  I GLC    +D                      
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 308 ---------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
                    GK++EA  LRD+M+ +GL PN+V  NALING CK   +++AR LF+ ++ +
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GLSP+V+TYNTLID YCK GR  +A  +++ M + G+ P   TY+ LI GL  EG  E  
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905

Query: 419 RNIMNELVNNG 429
             ++NE++  G
Sbjct: 906 VGLLNEMMKAG 916



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 101/177 (57%), Gaps = 3/177 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N  + GLCK+  ++    I+ D+   G  P   TY  LI   C    +GK+ +A  +  
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHA-C--SAVGKVNEAFCLRD 805

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           DM+  G++PN V +N LI+G CK  N+  A ++F ++   G++  VVTYN+LI+G C  G
Sbjct: 806 DMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGG 865

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           +  EA+ L+D+M   G+ P+ +T + LI+G   +   E++  L +++ + G   SV+
Sbjct: 866 RTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVM 922



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 20/268 (7%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F   +  +CK  +I +  ++++E+  +     V+  N+ I         DE V++  E  
Sbjct: 128 FRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYI----ASAVWDELVSVYREFS 183

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            S   P V   + ++  F +K + + A  +FD++ + G  PS+ + N+L+    + G   
Sbjct: 184 FS---PTVF--DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAF 238

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  +   M+  G+LPD+ +Y  ++    +EG V+   N + E+  +     +VTYN L+
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLI 298

Query: 442 GALCKDGK---SKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNE 497
                 G    +KK ++L+ E       K  P N  TY +LIKG+C++G++E A  L+  
Sbjct: 299 DGYVSLGDVCGAKKVLALMSE-------KGIPENSRTYTLLIKGYCKRGQMEQAEKLIGC 351

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++EK L  ++  Y ++       G + D
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDD 379



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 11/193 (5%)

Query: 339 FCKKKLVEKARVLFDDI----SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
            CK   +  A  ++D++     E   SP+V  ++ ++  + ++G  + A  + ++M   G
Sbjct: 161 LCKNNYI--ASAVWDELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCG 216

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
            +P + + N L++ L + G       +  +++  G+   + +Y I+V A CK+G+  +A 
Sbjct: 217 RVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAF 276

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           + + EM   E+    PN+VTYN LI G+   G +  A  +L  + EKG+  N  TY ++ 
Sbjct: 277 NFVKEM---ERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLI 333

Query: 515 EEMMEKGFIPDIE 527
           +   ++G +   E
Sbjct: 334 KGYCKRGQMEQAE 346


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 199/373 (53%), Gaps = 6/373 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A++I+
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M S G+ P VV YN ++ G C      +  +A+ +  +M +     ++VTFN L+D F
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAE---RWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C++  +   +++ E+M SHG    V+TY ++ING C +G +DEAV L   M + G KPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+   ++ G C       A  L   + +QG  P+ +T+NTLI+  CK+G +E A  +   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML  G  PD+ +Y+ +I GL + G  E    ++N +VN G+    + Y+ +  AL ++G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             K + + D    ++      + V YN +I   C++ + + A      ++  G +PN++T
Sbjct: 547 VNKVIQMFD---NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 510 YQIVREEMMEKGF 522
           Y ++ + +  +G 
Sbjct: 604 YTMLIKGLASEGL 616



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDYGLKSSVL-------------SCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R+G +     VL             +CN +L A+ ++G  ++   + +++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++M++M  +  +P +VT+N LI   C+ G   +
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   M E+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 270 VHE---VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++ GLC   +  EA  L  EM       + VT N L++ FC+  LV++   L + +   G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL   G      
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +M++++  G     VT+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 503

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK E+A  LLN ++ KG+ PN   Y  +   +  +G +  +     NI  T+
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 222/436 (50%), Gaps = 24/436 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +L  L +AK++  +   +   V+     ++ T     +T    LCRN +           
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT----FNTLIGYLCRNGLF---------- 267

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             + H   E   +  ++G    +     ++  + KEG  E    +   M    ++ N+  
Sbjct: 268 -ERVH---EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N VL GLC A +  +A +++ +M         VT+NIL+D +C+ G + ++ +   + +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---LLE 380

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G +P+ +T+ T+I+GFCK+  I  A+ + + M S G     V+Y  ++ GLC  G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +  +A  L  +M+  G  PN VT N LIN  CKK LVE+A  L   +   G SP +I+Y+
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+ID   K G+ E+A  + N M+++G+ P+   Y+ +   LSREG V  V  + + + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +R+  V YN ++ +LCK  ++ +A+   D    M      PN  TY +LIKG   +G  
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAI---DFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 489 EDANGLLNELLEKGLI 504
           ++A  LL+EL  +G +
Sbjct: 618 KEAQELLSELCSRGAL 633



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F  V+ GLC  G++  A +++++M   G +P    Y+++++  C+ GG     +  
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR-- 167

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V + M   G   +    N +++  C+   +  A+ +  ++   G  A +V+YN+++ GL
Sbjct: 168 -VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+  +  +   L DEM+     PN+VT N LI   C+  L E+   +   +SE G +P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             Y T+ID  CKEG +E A  + N M   G+ P+V  YN ++ GL      +    +++E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +         VT+NILV   C++G   + + LL++M         P+++TY  +I GFC+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML---SHGCMPDVITYTTVINGFCK 403

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +G +++A  LL  +   G  PN  +Y IV + +   G   D E  M
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 211/440 (47%), Gaps = 45/440 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDML 122
            L+  +V     P I +F   +    +NG F  V  +   +S   C+  +   + IID  
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID-- 294

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
                K     +  E   R   YGLK +V+  N +L+ L    ++++ E +  EM ++  
Sbjct: 295 --GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----- 237
            L+  +FN +++  C+ G +++  +++E M S G  P V+TY  +I+G+CK+G I     
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 238 ---------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
                                      G+   A+ +   M++ G  PN VTFNTLI+  C
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +  A+++ ++M  +G +  +++Y+++I+GL   GK +EA+ L + M+  G+ PN +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             +++     ++  V K   +FD+I +  +    + YN +I + CK    + A      M
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG-MRAGLVTYNILVGALCKDGK 449
           +  G +P+ STY  LI GL+ EG  +  + +++EL + G +R  L+ +  +     ++GK
Sbjct: 593 VSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGK 652

Query: 450 SK---KAVSLLDEMFKMEKE 466
            K      S +D  +K+  E
Sbjct: 653 QKCEENLTSAVDNNYKLPIE 672



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-- 245
           ++N ++ G C+AG+L  A  +   +    V P   T+  ++ G C +G I     ADA  
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRI-----ADALE 132

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V  +M   G  P    ++ +++  C+      +++V E M + G        N ++N +C
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +DEAV L  ++   G + ++V+ NA++ G C  K       L D++     +P+++
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+NTLI   C+ G  E    +   M + G  PD+  Y  +I G+ +EG++E    I+N +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G++  +V YN ++  LC   + K+A  LL EMF    +K  P + VT+N+L+  FCQ
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFNILVDFFCQ 368

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            G ++    LL ++L  G +P+  TY  V     ++G I
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 206/402 (51%), Gaps = 16/402 (3%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H G +   R    G   + ++   L+  L + GK ++ + +  ++       N   F  +
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP----NDVHFTIL 350

Query: 193 LNGLCKAGKLNKASDIMED-MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +NG  K+G+L++A+  + D M   G  P V T+N LI G CKKG +G    A  +  DM 
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGS---AVDMVNDMS 407

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
            NG  PN +T+ TL+DGFCK   +  A  V  EM + G    ++ YN L+  LC +GK+ 
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+ +  EM   G KP++ T N LI G CK    E A  L+ D+   G+  + +TYNTLI
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
            A+ + G +++A  + N ML RG   D  TYN LI    + G  E    + +E+V   + 
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              ++ N+L+  LC+ GK   A+ LL +M         P++VTYN LI G C+ G + +A
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIH---RGLAPDVVTYNSLINGLCKMGNIREA 644

Query: 492 NGLLNELLEKGLIPNQTTYQIV-----REEMMEKGFIPDIEG 528
             L N+L  +G+ P+  TY  +     R  M +  ++  + G
Sbjct: 645 FNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRG 686



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 216/397 (54%), Gaps = 11/397 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS++   L+ A  K  + +   +  +     G    V + N ++  L +  +  +   + 
Sbjct: 242 NSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLV 301

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    N  ++  ++NGLC+ GK+++A  ++  + +    P  V + ILI+GY K 
Sbjct: 302 DRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKS 357

Query: 235 GGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           G   ++ +A+A   D M++NG  P+  TFNTLI G CK   + +A+ +  +M ++G    
Sbjct: 358 G---RLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           ++TY +L++G C   +L+EA  + +EM A G + N++  N L+   CK   V KA  +  
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++S++G  P + T+NTLI   CK  R EDA A+   ML  GV+ +  TYN LI    R G
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            ++    ++N+++  G     +TYN L+ A CK G ++KA+ L DEM    ++   P+ +
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV---RKDLVPSNI 591

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + N+LI G C+ GK+ +A  LL +++ +GL P+  TY
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTY 628



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 199/358 (55%), Gaps = 7/358 (1%)

Query: 157 LLRALVKEGKFEDVE-YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+   VK G+ ++   ++Y +M +     ++ +FN +++GLCK G +  A D++ DM + 
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G +P ++TY  L+DG+CKK    ++ +A  V  +M   G   N + +N L+   CK+  +
Sbjct: 410 GCTPNLITYTTLLDGFCKKN---QLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ +  EM   G    + T+N+LI GLC   + ++A+AL  +M+  G+  N VT N L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+ F +   +++A  L +D+  +G     ITYN LI A+CK G  E A  + + M+ + +
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P   + N LI GL R G V     ++ ++++ G+   +VTYN L+  LCK G  ++A +
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           L +   K++ E   P+ +TYN LI   C+ G  +DA  LL   +E   IPN  T+ I+
Sbjct: 647 LFN---KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYIL 701



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 188/375 (50%), Gaps = 38/375 (10%)

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           E    S+N VL+ L  A   + A+++  +M S GV P V T+ +++   C    + ++  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCM---VNEVDN 226

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++ +DM ++G +PN V + TLI    K + ++ A+K+ EEM   G    V T+N +I 
Sbjct: 227 ACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIY 286

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL----------- 351
           GLC   ++ E   L D M+  G  PN +T   L+NG C+   V++A+VL           
Sbjct: 287 GLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH 346

Query: 352 ---------------------FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
                                +D + + G  P V T+NTLI   CK+G M  A  M N M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  P++ TY  L+ G  ++  +E    ++NE+   G    ++ YN+L+ ALCK+GK 
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            KA+ +L EM   +K  K P+I T+N LI G C+  + EDA  L  ++L  G+I N  TY
Sbjct: 467 PKALDMLGEM--SDKGCK-PDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTY 523

Query: 511 QIVREEMMEKGFIPD 525
             +    +  G I +
Sbjct: 524 NTLIHAFLRGGAIQE 538



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++   LL    K+ + E+  YV  EM  +  ELN+  +N +L  LCK GK+ KA
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++ +M   G  P + T+N LI G CK   + +   A A+++DM+ +G++ N VT+NTL
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCK---VDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F +   I  A+K+  +M   G     +TYN LI   C  G  ++A+ L DEM+   L
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ ++ N LING C+   V  A  L  D+  +GL+P V+TYN+LI+  CK G + +AF 
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N +   G+ PD  TYN LI    R G  +    ++   V N      VT+ ILV    
Sbjct: 647 LFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFI 706

Query: 446 KDGKSKKAVSL 456
           K+   +  +S 
Sbjct: 707 KEIGKENGISF 717



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 245/492 (49%), Gaps = 60/492 (12%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           G+ T +      +  C  +    ++++D+L+ A   ++  ++ +E   +    G+  +V 
Sbjct: 154 GQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK----GVIPTVY 209

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +   +++AL    + ++   + ++M +     N   +  +++ L K  ++N+A  ++E+M
Sbjct: 210 TFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM 269

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
             +G  P V T+N +I G C+   + ++++   +   M+  G  PN++T+  L++G C+ 
Sbjct: 270 FLMGCLPDVDTFNDVIYGLCR---LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326

Query: 273 ENISAAMK--------------------------------VFEEMGSHGIAAGVVTYNSL 300
             +  A                                  ++++M  +G    V T+N+L
Sbjct: 327 GKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTL 386

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+GLC  G +  AV + ++M A+G  PN++T   L++GFCKK  +E+A  + +++S +G 
Sbjct: 387 IHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGF 446

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             +++ YN L+ A CK G++  A  M   M D+G  PD+ T+N LI GL +    E    
Sbjct: 447 ELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALA 506

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLI 479
           +  +++ +G+ A  VTYN L+ A  + G  ++A+ L+++M      +  P + +TYN LI
Sbjct: 507 LYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF----RGCPLDEITYNGLI 562

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFI 523
           K FC+ G  E A GL +E++ K L+P+  +  +                +  +M+ +G  
Sbjct: 563 KAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLA 622

Query: 524 PDIEGHMYNISG 535
           PD+  +   I+G
Sbjct: 623 PDVVTYNSLING 634


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 203/370 (54%), Gaps = 7/370 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG+     S N L+  L+  G  E+   +  +M+++ ++ ++ ++  V  G    G ++ 
Sbjct: 214 YGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSG 273

Query: 205 ASDIMEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           A +I++ M +  G+ P +VTY +LI G+C+ G I +  +   + +D++ +G   N + ++
Sbjct: 274 AREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALR---LRRDLLSSGFQLNVILYS 330

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+   CK   +  A+++  EM ++ +   +VTY+ LI+GLC  GK+ +A+ L  EM  +
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + PN    + ++ G C+K ++  AR+ FD +    L P V  YN +ID Y K G +E+A
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   + D+ + P + T+N LI G  +   V   R ++  +  +G+    VTY  L+ A
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C++G   K   LL EM   + E   P +VTY V+IKG C++ KLE++  LL ++  KGL
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIE---PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567

Query: 504 IPNQTTYQIV 513
            P+Q TY  +
Sbjct: 568 APDQITYNTI 577



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 209/388 (53%), Gaps = 15/388 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+  +++ + L+  L K+GK +    +YKEM   RI  N  + + +L GLC+ G L+ A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              + +    + P V  YNI+IDGY K   +G + +A  ++K + +  I P+ VTFN+LI
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVK---LGDVEEAVRLYKRLRDKAITPSIVTFNSLI 473

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFCK+  +  A ++ E +  HG+    VTY +L+N  C +G +++   L  EM    ++
Sbjct: 474 YGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE 533

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P VVT   +I G CK++ +E++  L +D+  +GL+P  ITYNT+I  +CK   M  AF +
Sbjct: 534 PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFEL 593

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + ML   + P  +TYN LI GL R G+VE    ++  L +  +    V Y  ++ A C 
Sbjct: 594 LDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCV 653

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            G +++AV +  +M     EK +  +I  Y+ +I   C++  + +A      +L  G+ P
Sbjct: 654 KGDAQRAVKVFHQMV----EKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSP 709

Query: 506 NQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +Q  +     EMM   F     GH++++
Sbjct: 710 DQEIF-----EMMLNAF--HRAGHVHSV 730



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 209/399 (52%), Gaps = 22/399 (5%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           K   D GLK  +++   L+    + G  E+   + +++     +LN+  ++ +L+ LCK 
Sbjct: 280 KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G++++A  ++ +M++  + P +VTY+ILI G CK+   GK+ +A  ++K+M  N I PN 
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ---GKVQQAIQLYKEMCFNRIFPNS 396

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
              + ++ G C+   +S A   F+ +    +   V  YN +I+G    G ++EAV L   
Sbjct: 397 FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           +    + P++VT N+LI GFCK + V +AR L + I   GL PS +TY TL++AYC+EG 
Sbjct: 457 LRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGN 516

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +     +   M  + + P V TY  +I GL ++  +E    ++ ++   G+    +TYN 
Sbjct: 517 INKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNT 576

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           ++   CK    +KA  LLD+M     E   P   TYNVLI G C+ G +EDA+ +L  L 
Sbjct: 577 IIQCFCKAKDMRKAFELLDDMLIHNLE---PTPATYNVLIDGLCRYGDVEDADRVLVSLQ 633

Query: 500 EKGLIPNQTTYQI----------------VREEMMEKGF 522
           ++ +   +  Y                  V  +M+EKGF
Sbjct: 634 DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 163/316 (51%), Gaps = 3/316 (0%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+  V   N ++   VK G  E+   +YK ++ + I  ++ +FN ++ G CK  K+ +A 
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++E +K  G+ P  VTY  L++ YC++G I K+++   +  +M    I P  VT+  +I
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE---LLLEMNLKDIEPTVVTYTVVI 543

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G CK   +  ++++ E+M + G+A   +TYN++I   C    + +A  L D+M+   L+
Sbjct: 544 KGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P   T N LI+G C+   VE A  +   + ++ ++ + + Y T+I A+C +G  + A  +
Sbjct: 604 PTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKV 663

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M+++G    +  Y+ +I  L +   +   +     ++++G+      + +++ A  +
Sbjct: 664 FHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHR 723

Query: 447 DGKSKKAVSLLDEMFK 462
            G       LL  M K
Sbjct: 724 AGHVHSVFELLAVMIK 739



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           +I+ID     YVK          +KR  D  +  S+++ N L+    K  K  +   + +
Sbjct: 435 NIMID----GYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            +K   +E +  ++  ++N  C+ G +NK  +++ +M    + P VVTY ++I G CK+ 
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
              K+ ++  + +DM   G+ P+++T+NT+I  FCK +++  A ++ ++M  H +     
Sbjct: 551 ---KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TYN LI+GLC  G +++A  +   +    +    V    +I   C K   ++A  +F  +
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            E+G   S+  Y+ +I+  CK   + +A      ML  GV PD   +  ++    R G+V
Sbjct: 668 VEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHV 727

Query: 416 EGVRNIMNELVNNGM 430
             V  ++  ++  G+
Sbjct: 728 HSVFELLAVMIKFGL 742



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 142/282 (50%), Gaps = 3/282 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +  + L+  + KN K        +    +GL+ S ++   L+ A  +EG    +  +  E
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLE 526

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  + IE  + ++  V+ GLCK  KL ++  ++EDM++ G++P  +TYN +I  +CK   
Sbjct: 527 MNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAK- 585

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
              M KA  +  DM+ + + P   T+N LIDG C+  ++  A +V   +    I    V 
Sbjct: 586 --DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVA 643

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y ++I   CV G    AV +  +M+  G + ++   +A+IN  CK+ L+ +A+  F  + 
Sbjct: 644 YTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIML 703

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
             G+SP    +  +++A+ + G +   F +   M+  G+L D
Sbjct: 704 SDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 44/320 (13%)

Query: 244 DAVFK--DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DA+F    M E  + P+  T+N+L+       +      V+ ++   G      T + ++
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIV 157

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC   +  +AV    +       P+VV+ N +++ +CK  L + A+  F  + + G+ 
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD----------------------- 398
           P   +YN LI      G ME+A  + N M  +G+ PD                       
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 399 -------------VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
                        + TY  LI G  + GN+E    +  +L+++G +  ++ Y++L+ +LC
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+  +A+ LL   ++ME     P++VTY++LI G C++GK++ A  L  E+    + P
Sbjct: 338 KRGQVDEALQLL---YEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394

Query: 506 NQTTYQIVREEMMEKGFIPD 525
           N   +  + + + EKG + D
Sbjct: 395 NSFAHSGILKGLCEKGMLSD 414



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A+ V  +M    +   + TYNSL+  L      D    + +++  SG   +  TS+ 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSI 155

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++G C +     A +       +  +PSV+++NT++  YCK G  + A +    ML  G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +LPD  +YN LI GL   G++E    + N++   G++  +VTY I+       G    A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            ++ +M   E  K  P++VTY VLI G CQ G +E+A  L  +LL  G   N   Y ++ 
Sbjct: 276 EIIQKMLTDEGLK--PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLL 333

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
             + ++G + +    +Y +  
Sbjct: 334 SSLCKRGQVDEALQLLYEMEA 354


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 215/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S +   V      S S +F A+     +   +  +   L+ AY++
Sbjct: 8   MIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSGLITAYLE 67

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 68  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYF 127

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L+ GY + G + + ++  +   
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSA-- 185

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M  +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 186 -MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNG 244

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A VL  ++S +G  P  ITY 
Sbjct: 245 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYT 304

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       ++ E+++ 
Sbjct: 305 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 364

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G +    TY +++   CK G       LL EM   +++   P++VTYNVL+ G
Sbjct: 365 GXKPDTRTYTMIINEFCKKGDVWTGSKLLKEM---QRDGHVPSVVTYNVLMNG 414



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 52  RSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V++NTL+ 
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEGNI---RVAQSVFDAITKWGLRPSVVSYNTLMS 168

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+DEA  L DEM+  GL P
Sbjct: 169 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVP 228

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
             VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 229 XGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLI 288

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +G  PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 289 XEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 348

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 349 GRSVDAEKMLREMLSVGXK---PDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405

Query: 508 TTYQIV 513
            TY ++
Sbjct: 406 VTYNVL 411



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 158/279 (56%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCK+ NI  A  VF+ +   G+   VV+YN+L++G   
Sbjct: 113 YQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIR 172

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  +++A  LFD++   GL P  +T
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVT 232

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++GB++    ++ E+ 
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMS 292

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G +   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 293 LKGXKPDKITYTTLIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 345

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  G  P+  TY ++  E  +KG
Sbjct: 346 CQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKG 384


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 236/478 (49%), Gaps = 20/478 (4%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSV--ST 100
           P L+L +F WS   + A  S     RL  SL  A  +P+    LH  +       +  ++
Sbjct: 96  PKLLLDFFYWSRPRI-APPSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLAS 154

Query: 101 IFHALSTCSDSLCRN--------SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           I  A+    DS  R+        + ++D+L+  Y KN       +     GD GL  +  
Sbjct: 155 IQRAIQ---DSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRR 211

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
            CN LL+ L++    E V  +   M+   I  ++ +++  L   CKA   + A  + E+M
Sbjct: 212 CCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEM 271

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +    +   VTYN++I G C+ G + + +      ++MV+ G+ P+  T+  L++G CK 
Sbjct: 272 RRRDCAMNEVTYNVMISGLCRSGAVEEAF---GFKEEMVDYGLSPDAFTYGALMNGLCKG 328

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A  + +EM   G+   VV Y +L++G   +GK  EA  + +EM+++G++PN +  
Sbjct: 329 GRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMY 388

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + LI G CK   + +A  L +++ + G  P   TY+ L+  + +    + AF + N M +
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRN 448

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G+LP+  TY  +I GL + G  +   N++ E+++ G++     Y  L+    K+G    
Sbjct: 449 SGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISL 508

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           A   L+    M K    P++  YN LIKG    G++E+A     ++ ++GL+P++ TY
Sbjct: 509 ACESLE---NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTY 563



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 218/417 (52%), Gaps = 8/417 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ L  N+ +   L++ + K     L  E+ +      +   +   N L++ L   G+ E
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIE 542

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           + E  Y ++++R +  +  +++ +++G CK   L KA  +++ M + G+ P   TY  L+
Sbjct: 543 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLL 602

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           +GY K        K  ++ + M+ +G  P+   +  +I    + EN+  A  V  E+  +
Sbjct: 603 EGYFKSN---DHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   +  Y+SLI+GLC    +++AV L DEM   GL+P +V  NALI+GFC+   + +A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R +FD I  +GL P+ +TY  LID  CK G + DAF +   MLDRG+ PD   YN L  G
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            S   ++E    +  E+ N G  A +  ++ LV   CK G+ ++   LL  M  M++E  
Sbjct: 780 CSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVM--MDRE-I 835

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT-TYQIVREEMMEKGFIP 524
            PN  T   +I  F + GKL +A+ +  EL +K    + T  + ++  +M+ KG IP
Sbjct: 836 VPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKGLIP 892



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 212/442 (47%), Gaps = 59/442 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +V+    L+   +KEGK  +   +  EM    ++ N   ++ ++ GLCK G+L +A
Sbjct: 345 GLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 404

Query: 206 S-----------------------------------DIMEDMKSLGVSPKVVTYNILIDG 230
           S                                   +++ +M++ G+ P   TY I+I+G
Sbjct: 405 SKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMING 464

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            C+ G   +  +A  + ++M+  G+ PN   +  LI G  K+ +IS A +  E M    +
Sbjct: 465 LCQNG---ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +  YNSLI GL   G+++EA     ++   GL P+  T + LI+G+CK + +EKA  
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L   +   GL P+  TY  L++ Y K    E   ++  SML  G  PD   Y  +I  LS
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R  N+E    ++ E+  NG+   L  Y+ L+  LCK    +KAV LLDE   M KE   P
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE---MAKEGLEP 698

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
            IV YN LI GFC+ G +  A  + + +L KGL+PN  TY                  + 
Sbjct: 699 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLY 758

Query: 515 EEMMEKGFIPDIEGHMYNISGT 536
           ++M+++G  PD    +YN+  T
Sbjct: 759 KDMLDRGIAPD--AFVYNVLAT 778



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 31/360 (8%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV------------------------ 222
           D+F  +   LC A    +A+ ++  M      P +V                        
Sbjct: 116 DAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHST 175

Query: 223 -TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
              ++L+D Y K G +    +   +  D+   G+ P     N L+    + + +    K+
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDL---GLAPTRRCCNGLLKDLLRADAMELVWKL 232

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
              M   GI   V TY++ +   C     D A  + +EM       N VT N +I+G C+
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              VE+A    +++ + GLSP   TY  L++  CK GR+++A A+ + M   G+ P+V  
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  L+ G  +EG      +I+NE+++ G++   + Y+ L+  LCK G+  +A  LL+EM 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           K+      P+  TY+ L++G  Q    + A  LLNE+   G++PN  TY I+   + + G
Sbjct: 413 KVGHR---PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNG 469


>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 248/511 (48%), Gaps = 17/511 (3%)

Query: 24  LKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIR 83
           L +  P+ +   L    +D   +L +F W   +L  + +L     ++H L  ++ +    
Sbjct: 81  LPHMGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAM 140

Query: 84  SFLHMFVKNGKFTSVST-----IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           + L   ++  +   V       I+  L  C++    N  I DML+ AYVK      G   
Sbjct: 141 NLLSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLAT 200

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+R  +     +V++CN LL  L +         VY+EM R  I  N  +FN + + LCK
Sbjct: 201 FRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCK 260

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G  +K +  ++ M+  G  P +VTYN L++ YCKK    ++  A  ++K M   G++PN
Sbjct: 261 DGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKK---RRLEDAFYLYKIMYIRGVMPN 317

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +T   L++G C++  +  A ++F +M   GI   VV+YN+L++G C +GK+    +L  
Sbjct: 318 LITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLH 377

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+ +G+ P+ VT   ++ GF +   +  A     ++    +      Y+ LI A C EG
Sbjct: 378 EMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEG 437

Query: 379 RMEDAFAMRNSML---DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           R    FA R+ +L     G +P ++TYN L+  L +  NVE    + +E+V   M   LV
Sbjct: 438 R---PFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLV 494

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  ++  LC+  ++ +A  LL+EM         P++     LI G+C++ K++ A  LL
Sbjct: 495 AYRAVISCLCRVNRTLEAEGLLEEMV---SSGILPDVEISRALINGYCEENKVDKAVSLL 551

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
                +  + +  +Y  V +   + G + ++
Sbjct: 552 KFFANEFQVYDTESYNAVVKVFCDVGNVAEL 582



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 22/355 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ ++    KAG + K              P V+  N L+ G  +   IG+ +   AV++
Sbjct: 181 FDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCW---AVYE 237

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   GI  N  TFN +    CKD +     +  ++M   G    +VTYN+L+N  C   
Sbjct: 238 EMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKR 297

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L++A  L   M   G+ PN++T   L+NG C++  V++A  LF  +  +G+ P V++YN
Sbjct: 298 RLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYN 357

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+  YC+EG+M+   ++ + M+  G+ PD  T   ++ G +R+G +    N + EL   
Sbjct: 358 TLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRF 417

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            ++     Y+ L+ ALC +G+   A S L    ++ ++   P I TYN L++  C+   +
Sbjct: 418 RIKIPEDLYDYLIVALCIEGRPFAARSFL---LRISQDGYMPKINTYNKLVESLCKFNNV 474

Query: 489 EDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIE 527
           E+A  L +E++++ +I N   Y+ V                 EEM+  G +PD+E
Sbjct: 475 EEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVE 529



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 44/351 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  +++ N L+ +  K+ + ED  Y+YK M  R +  NL +   ++NGLC+ GK+ +A
Sbjct: 278 GFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEA 337

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VV+YN L+ GYC++G   KM    ++  +M+ NGI P+ VT   +
Sbjct: 338 HQLFHQMVHRGIDPDVVSYNTLVSGYCREG---KMQMCRSLLHEMIGNGICPDSVTCRLI 394

Query: 266 IDGFCKDENISAAM-----------KVFEEMGSHGIAAGVV------------------- 295
           ++GF +D  + +A+           K+ E++  + I A  +                   
Sbjct: 395 VEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGY 454

Query: 296 -----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                TYN L+  LC    ++EA+ L+ EM+   +  N+V   A+I+  C+     +A  
Sbjct: 455 MPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEG 514

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L +++   G+ P V     LI+ YC+E +++ A ++     +   + D  +YN ++    
Sbjct: 515 LLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFC 574

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
             GNV  +  + ++L+  G  +  +T   ++  L      +KA+   DEM 
Sbjct: 575 DVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL------QKAMEQDDEML 619



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 167/357 (46%), Gaps = 34/357 (9%)

Query: 87  HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           H+  K+G    V+     +    +    + +  + L+ +Y K  +    F  +K     G
Sbjct: 256 HVLCKDGDTDKVTRFLDKME--EEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRG 313

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  ++++   L+  L +EGK ++   ++ +M  R I+ ++ S+N +++G C+ GK+    
Sbjct: 314 VMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCR 373

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------------------- 237
            ++ +M   G+ P  VT  ++++G+ + G +                             
Sbjct: 374 SLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVAL 433

Query: 238 ---GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G+ + A +    + ++G +P   T+N L++  CK  N+  A+ +  EM    +   +
Sbjct: 434 CIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNL 493

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y ++I+ LC   +  EA  L +EM++SG+ P+V  S ALING+C++  V+KA  L   
Sbjct: 494 VAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKF 553

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            + +       +YN ++  +C  G + +   +++ +L  G + +  T   +I GL +
Sbjct: 554 FANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGLQK 610


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 199/373 (53%), Gaps = 6/373 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A++I+
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M S G+ P VV YN ++ G C      +  +A+ +  +M +     ++VTFN L+D F
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAE---RWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C++  +   +++ E+M SHG    V+TY ++ING C +G +DEAV L   M + G KPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+   ++ G C       A  L   + +QG  P+ +T+NTLI+  CK+G +E A  +   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML  G  PD+ +Y+ +I GL + G  E    ++N +VN G+    + Y+ +  AL ++G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             K + + D    ++      + V YN +I   C++ + + A      ++  G +PN++T
Sbjct: 547 VNKVIQMFD---NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 510 YQIVREEMMEKGF 522
           Y ++ + +  +G 
Sbjct: 604 YTMLIKGLASEGL 616



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDYGLKSSVL-------------SCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R+G +     VL             +CN +L A+ ++G  ++   + +++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++M++M  +  +P +VT+N LI   C+ G   +
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   M E+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 270 VHE---VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++ GLC   +  EA  L  EM       + VT N L++ FC+  LV++   L + +   G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL   G      
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +M++++  G     VT+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 503

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK E+A  LLN ++ KG+ PN   Y  +   +  +G +  +     NI  T+
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 221/434 (50%), Gaps = 24/434 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +L  L +AK++  +   +   V+     ++ T     +T    LCRN +           
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT----FNTLIGYLCRNGLF---------- 267

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             + H   E   +  ++G    +     ++  + KEG  E    +   M    ++ N+  
Sbjct: 268 -ERVH---EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N VL GLC A +  +A +++ +M         VT+NIL+D +C+ G + ++ +   + +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---LLE 380

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G +P+ +T+ T+I+GFCK+  I  A+ + + M S G     V+Y  ++ GLC  G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +  +A  L  +M+  G  PN VT N LIN  CKK LVE+A  L   +   G SP +I+Y+
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+ID   K G+ E+A  + N M+++G+ P+   Y+ +   LSREG V  V  + + + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +R+  V YN ++ +LCK  ++ +A+   D    M      PN  TY +LIKG   +G  
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAI---DFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 489 EDANGLLNELLEKG 502
           ++A  LL+EL  +G
Sbjct: 618 KEAQELLSELCSRG 631



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F  V+ GLC  G++  A +++++M   G +P    Y+++++  C+ GG     +  
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR-- 167

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V + M   G   +    N +++  C+   +  A+ +  ++   G  A +V+YN+++ GL
Sbjct: 168 -VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+  +  +   L DEM+     PN+VT N LI   C+  L E+   +   +SE G +P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             Y T+ID  CKEG +E A  + N M   G+ P+V  YN ++ GL      +    +++E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +         VT+NILV   C++G   + + LL++M         P+++TY  +I GFC+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML---SHGCMPDVITYTTVINGFCK 403

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +G +++A  LL  +   G  PN  +Y IV + +   G   D E  M
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-- 245
           ++N ++ G C+AG+L  A  +   +    V P   T+  ++ G C +G I     ADA  
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRI-----ADALE 132

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V  +M   G  P    ++ +++  C+      +++V E M + G        N ++N +C
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +DEAV L  ++   G + ++V+ NA++ G C  K       L D++     +P+++
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+NTLI   C+ G  E    +   M + G  PD+  Y  +I G+ +EG++E    I+N +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G++  +V YN ++  LC   + K+A  LL EMF    +K  P + VT+N+L+  FCQ
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFNILVDFFCQ 368

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            G ++    LL ++L  G +P+  TY  V     ++G I
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 76/400 (19%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   +S   C+  +   + IID   
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID--- 294

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N +L+ L    ++++ E +  EM ++   
Sbjct: 295 -GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------ 237
           L+  +FN +++  C+ G +++  +++E M S G  P V+TY  +I+G+CK+G I      
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 238 --------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
                                     G+   A+ +   M++ G  PN VTFNTLI+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV-- 329
              +  A+++ ++M  +G +  +++Y+++I+GL   GK +EA+ L + M+  G+ PN   
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 330 ---------------------------------VTSNALINGFCKKKLVEKARVLFDDIS 356
                                            V  NA+I+  CK+   ++A   F  + 
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             G  P+  TY  LI     EG  ++A  + + +  RG L
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 199/373 (53%), Gaps = 6/373 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++++ N L+  L + G FE V  V  +M       ++  +  +++G+CK G L  A++I+
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M S G+ P VV YN ++ G C      +  +A+ +  +M +     ++VTFN L+D F
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAE---RWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C++  +   +++ E+M SHG    V+TY ++ING C +G +DEAV L   M + G KPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+   ++ G C       A  L   + +QG  P+ +T+NTLI+  CK+G +E A  +   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML  G  PD+ +Y+ +I GL + G  E    ++N +VN G+    + Y+ +  AL ++G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             K + + D    ++      + V YN +I   C++ + + A      ++  G +PN++T
Sbjct: 547 VNKVIQMFD---NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 510 YQIVREEMMEKGF 522
           Y ++ + +  +G 
Sbjct: 604 YTMLIKGLASEGL 616



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 133 HLGFEAFKRAGDYGLKSSVL-------------SCNQLLRALVKEGKFEDVEYVYKEMKR 179
           H+  EA  R+G +     VL             +CN +L A+ ++G  ++   + +++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
              E ++ S+N VL GLC A +     ++M++M  +  +P +VT+N LI   C+ G   +
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +++   V   M E+G  P+   + T+IDG CK+ ++  A ++   M S+G+   VV YN+
Sbjct: 270 VHE---VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           ++ GLC   +  EA  L  EM       + VT N L++ FC+  LV++   L + +   G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P VITY T+I+ +CKEG +++A  +  SM   G  P+  +Y  ++ GL   G      
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +M++++  G     VT+N L+  LCK G  ++A+ LL +M         P++++Y+ +I
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML---VNGCSPDLISYSTVI 503

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + GK E+A  LLN ++ KG+ PN   Y  +   +  +G +  +     NI  T+
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 221/434 (50%), Gaps = 24/434 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           +L  L +AK++  +   +   V+     ++ T     +T    LCRN +           
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT----FNTLIGYLCRNGLF---------- 267

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             + H   E   +  ++G    +     ++  + KEG  E    +   M    ++ N+  
Sbjct: 268 -ERVH---EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N VL GLC A +  +A +++ +M         VT+NIL+D +C+ G + ++ +   + +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---LLE 380

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G +P+ +T+ T+I+GFCK+  I  A+ + + M S G     V+Y  ++ GLC  G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +  +A  L  +M+  G  PN VT N LIN  CKK LVE+A  L   +   G SP +I+Y+
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+ID   K G+ E+A  + N M+++G+ P+   Y+ +   LSREG V  V  + + + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +R+  V YN ++ +LCK  ++ +A+   D    M      PN  TY +LIKG   +G  
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAI---DFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 489 EDANGLLNELLEKG 502
           ++A  LL+EL  +G
Sbjct: 618 KEAQELLSELCSRG 631



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F  V+ GLC  G++  A +++++M   G +P    Y+++++  C+ GG     +  
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR-- 167

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V + M   G   +    N +++  C+   +  A+ +  ++   G  A +V+YN+++ GL
Sbjct: 168 -VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+  +  +   L DEM+     PN+VT N LI   C+  L E+   +   +SE G +P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
             Y T+ID  CKEG +E A  + N M   G+ P+V  YN ++ GL      +    +++E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +         VT+NILV   C++G   + + LL++M         P+++TY  +I GFC+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML---SHGCMPDVITYTTVINGFCK 403

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +G +++A  LL  +   G  PN  +Y IV + +   G   D E  M
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA-- 245
           ++N ++ G C+AG+L  A  +   +    V P   T+  ++ G C +G I     ADA  
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRI-----ADALE 132

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V  +M   G  P    ++ +++  C+      +++V E M + G        N ++N +C
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G +DEAV L  ++   G + ++V+ NA++ G C  K       L D++     +P+++
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T+NTLI   C+ G  E    +   M + G  PD+  Y  +I G+ +EG++E    I+N +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
            + G++  +V YN ++  LC   + K+A  LL EMF    +K  P + VT+N+L+  FCQ
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFNILVDFFCQ 368

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            G ++    LL ++L  G +P+  TY  V     ++G I
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 76/400 (19%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
           L+  +V     P I +F   +    +NG F  V  +   +S   C+  +   + IID   
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID--- 294

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N +L+ L    ++++ E +  EM ++   
Sbjct: 295 -GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------ 237
           L+  +FN +++  C+ G +++  +++E M S G  P V+TY  +I+G+CK+G I      
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 238 --------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
                                     G+   A+ +   M++ G  PN VTFNTLI+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV-- 329
              +  A+++ ++M  +G +  +++Y+++I+GL   GK +EA+ L + M+  G+ PN   
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 330 ---------------------------------VTSNALINGFCKKKLVEKARVLFDDIS 356
                                            V  NA+I+  CK+   ++A   F  + 
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             G  P+  TY  LI     EG  ++A  + + +  RG L
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 211/422 (50%), Gaps = 32/422 (7%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           II+ M+   Y       +     K + D   K S+   N+LL  L + G  +++  +Y E
Sbjct: 123 IIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTE 182

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    + +++ +FN ++N  CK G + +A   M  M   G+SP   T    I GYC+   
Sbjct: 183 MLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKD 242

Query: 237 I----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +                            G++ +A ++F  M ++   PN  T+  LI G
Sbjct: 243 VDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG 302

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C+ +N+  AM + +EM    +   ++TYNSLI G C  G LD A  L   M   GL P+
Sbjct: 303 LCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T    I+  CK   VE+AR LFD ++E+G+S +VI Y+ LID YCK G++++A  +  
Sbjct: 362 QRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFE 421

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ML +   P+  T+N LI GL   GN++   ++ +++V  G++  + T+NIL+G + K G
Sbjct: 422 KMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQG 481

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
               A   L    KM    + P   TYN  I+ +C  GK+++A  ++ ++ E+G+ P+  
Sbjct: 482 DFDDAHKCLQ---KMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538

Query: 509 TY 510
           TY
Sbjct: 539 TY 540



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 210/424 (49%), Gaps = 21/424 (4%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
            +L Y ++      F  F+   +     + +S NQL+  L + G+ ++   ++  MK   
Sbjct: 233 FILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDC 288

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++  ++ GLC+   ++KA  ++++M    + P ++TYN LI G C+ G +   Y
Sbjct: 289 CYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAY 347

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +  ++ K   E G++P++ T+   ID  CK   +  A ++F+ +   G++A V+ Y+ LI
Sbjct: 348 RLLSLMK---ERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLI 404

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  GK+DEA  L ++M++    PN  T NALI+G C    +++A  LFD + + GL 
Sbjct: 405 DGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK 464

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V T+N LI    K+G  +DA      M+  G  P   TYN  I      G V+   ++
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM 524

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           M ++   G+     TY  L+ A  K G +  A  +L  MF  + E   P+  T+  LIK 
Sbjct: 525 MVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCE---PSHHTFLSLIKQ 581

Query: 482 FCQKGKLEDANGL--LNELLEKGLIPNQTTYQIVR--------EEMMEKGFIPDIEGHMY 531
              K  + + +G   +  +   G +P    ++++         EEM + G  PD + +  
Sbjct: 582 LFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEK 641

Query: 532 NISG 535
            ISG
Sbjct: 642 LISG 645



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 169/380 (44%), Gaps = 23/380 (6%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM--LAYVKNMKPHLGFEAFKRAGDYG 146
           + K GK      +F  +   S +   N+   + L+  L    N+K  L    F +    G
Sbjct: 407 YCKVGKVDEAGCLFEKM--LSKNCSPNAYTFNALIHGLCSAGNLKEALSL--FDQMVKMG 462

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           LK +V + N L+  ++K+G F+D     ++M     +    ++N  +   C AGK+ +A 
Sbjct: 463 LKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAE 522

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           D+M  MK  GV P   TY  LI  Y   G +G  Y A  V K M +    P+  TF +LI
Sbjct: 523 DMMVQMKEEGVPPDDFTYTSLIKAY---GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLI 579

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAA----GVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
                 + +     V E+ G  G+ +    G V  +++   +    + D  + L +EM  
Sbjct: 580 ------KQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMM----EFDIVIELFEEMEK 629

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P+      LI+G CK + +  A  L D + ++G+SPS + +N +I   CK  +  +
Sbjct: 630 HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGE 689

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M+  G  P +     LI GL  EG  E   ++  +L   G     + + IL+ 
Sbjct: 690 AANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILID 749

Query: 443 ALCKDGKSKKAVSLLDEMFK 462
            + K G  ++   L +EM K
Sbjct: 750 GMLKQGLVEEFSQLFEEMEK 769



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 35/411 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G+ ++V+  + L+    K GK ++   ++++M  +    N  +FN +++GLC 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AG L +A  + + M  +G+ P V T+NILI    K+G     +K     + M+ +G  P 
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC---LQKMMSSGEKPV 501

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             T+N  I+ +C    +  A  +  +M   G+     TY SLI      G    A  +  
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 319 EMMASGLKPNVVTSNALING-FCKKKLVEKARV--------------------------- 350
            M  +  +P+  T  +LI   F K+ +VEK+                             
Sbjct: 562 SMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621

Query: 351 -LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF+++ + G +P    Y  LI   CK   +  A  + + M   G+ P    +N +I+  
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            +        NI+ +++ +G    L     L+  L ++G++++  S+     K+      
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK---KLRGCGYN 738

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + + + +LI G  ++G +E+ + L  E+ + G   +  TY I+ +++  K
Sbjct: 739 DDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGK 789


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 218/421 (51%), Gaps = 6/421 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L      +H L   + + + +S + + V      S   +F A+     +   +  +  
Sbjct: 6   HTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFS 65

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+   
Sbjct: 66  GLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILEC 125

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 126 GYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 185

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 186 FRLKSA---MRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTL 242

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N L+ G CKK  + +A  L D++  +GL
Sbjct: 243 IDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGL 302

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 303 KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEK 362

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ E+++ G++    TY +++   CK G   K   LL E   M++    P +VTYNVL+ 
Sbjct: 363 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE---MQRNGHVPXVVTYNVLMN 419

Query: 481 G 481
           G
Sbjct: 420 G 420



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 160/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 119 YEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIR 178

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 179 LGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVT 238

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN L+ GL ++G++     +++E+ 
Sbjct: 239 FTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMX 298

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 299 XKGLKPDKFTYTTLIDGCCKEGD-------LDAAFEHRKRMIQENIRLDDVAYTALISGL 351

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 352 CQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 390



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 58  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 117

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A  VF  + + G+ P+ V++NTL++
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAPLVFDAITKWGLRPSVVSYNTLMN 174

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC +  +D+A  L DEM+  GL P
Sbjct: 175 GYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVP 234

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTL+   CK+G +  A  + 
Sbjct: 235 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLI 294

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 295 DEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQE 354

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P  
Sbjct: 355 GRSXDAEKMLREMLSVGLK---PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXV 411

Query: 508 TTYQIV 513
            TY ++
Sbjct: 412 VTYNVL 417



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 3/235 (1%)

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +  ++ LI      G L +A+          L     T   ++    K +  +     ++
Sbjct: 61  IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 120

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           +I E G   S+  +N L+  +CK+G +  A  + +++   G+ P V +YN L+ G  R G
Sbjct: 121 EILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLG 180

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           +++    + + +  +G++  + TY++L+  LCK+     A  L DEM     +   PN V
Sbjct: 181 DLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLV---KGLVPNXV 237

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           T+  LI G C+ G+++ A  +  ++L + L+P+  TY  +   + +KG +    G
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHG 292


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 47/438 (10%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED- 169
           ++C  +I++D    A+    +P +GF  F R    GLK+ V+  N LL+ L    + +D 
Sbjct: 118 TVCTYNILMDCCCRAH----RPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDA 173

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNIL 227
           V  +   M    +E +  S++ VL  LC+  +  +A D++  M  KS G SP VV+YN +
Sbjct: 174 VNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTV 233

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I G+ ++G +    KA  +F +M++ G++P+ VT+++ ID  CK   +  A  V  +M S
Sbjct: 234 IHGFFREGEVS---KACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
           +G     VTYN +I+G  + G+  E   +  EM   GL P++ T N+ ++  CK    ++
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 348 ARVLFDDISEQGLSPSVIT-----------------------------------YNTLID 372
           A   FD ++ +G  P ++T                                   YN LID
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           AY K G M++A  +   M +RGV+PD  TY  +IA  SR G +    +  N+++  G++ 
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             + YN L+   C  G   KA  L+ EM  M +    PN V +N +I   C++G++ +A 
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEM--MSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 493 GLLNELLEKGLIPNQTTY 510
            + + ++  G  P+  T+
Sbjct: 529 DIFDLVIHIGERPDVITF 546



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 257/558 (46%), Gaps = 91/558 (16%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK--YPKIRSF---LHMFVKNGKFTSVST 100
           +L+  C  ++  RA         LLH++V       P + S+   +H F + G+ +    
Sbjct: 196 VLKSLCEDSRSQRALD-------LLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACN 248

Query: 101 IFHAL------------STCSDSLCRNSII--IDMLMLAYVKNMKPHLGFEA-------- 138
           +FH +            S+  D+LC+   +   ++++   + N     GFE         
Sbjct: 249 LFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN-----GFEPDKVTYNCM 303

Query: 139 ----------------FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
                           F+     GL   + +CN  + +L K GK ++    +  M  +  
Sbjct: 304 IHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH 363

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + +L +++ +L+G    G +    ++   M+  G+      YNILID Y K+G    M +
Sbjct: 364 KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG---MMDE 420

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  +F  M E G++P+  T+ T+I  F +   ++ AM  F +M + G+    + YNSLI 
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480

Query: 303 GLCVDGKLDEAVALRDEMMASGL-KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           G C+ G L +A  L  EMM+ G+ +PN V  N++IN  CK+  V +A+ +FD +   G  
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGER 540

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P VIT+N+LID Y   G+ME AF + ++M+  G+ PDV TY+ L+ G  R G ++    +
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------------------- 461
             E+++ G++   +TY I++  L  DG++  A  +  EM                     
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 462 ------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
                       K+       NI   N +I    +  K E+AN L + +   GL+PN +T
Sbjct: 661 NNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAST 720

Query: 510 YQIVREEMMEKGFIPDIE 527
           Y ++   ++++G + + +
Sbjct: 721 YGVMITNLLKEGSVEEAD 738



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 185/393 (47%), Gaps = 45/393 (11%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS--------- 218
           ED  +++ E+ R+   +   + N  L  L +A     +S    D  SL V+         
Sbjct: 54  EDTHHLFDELLRQTTPVPERALNGFLTALARA----PSSATCRDGPSLAVALFNRICREE 109

Query: 219 -------PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
                  P V TYNIL+D  C+     +     A+F   ++ G+  + +  N L+   C 
Sbjct: 110 ARPRVALPTVCTYNILMDCCCRA---HRPTVGFALFGRFLKTGLKTDVIVANILLKCLCH 166

Query: 272 DENISAAMKV-FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM--ASGLKPN 328
            +    A+ V    M   G+    ++Y++++  LC D +   A+ L   M+  + G  PN
Sbjct: 167 AKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPN 226

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           VV+ N +I+GF ++  V KA  LF ++ +QG+ P V+TY++ IDA CK   M+ A  +  
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLR 286

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+  G  PD  TYNC+I G S  G  +    +  E+   G+   + T N  + +LCK G
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           KSK+A    D    M  +   P++VTY+VL+ G+  +G + D   L N +   G++ + +
Sbjct: 347 KSKEAAEFFDS---MAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403

Query: 509 TYQI----------------VREEMMEKGFIPD 525
            Y I                +  +M E+G +PD
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 180/346 (52%), Gaps = 7/346 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-ELNLDSFNFVLNGLCKAGKLNK 204
           GLK   +  N L++     G     + +  EM  R I   N   FN ++N LCK G++ +
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A DI + +  +G  P V+T+N LIDGY   G +GKM KA  V   M+  GI P+ VT++ 
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGY---GLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+DG+C++  I   + +F EM S G+    +TY  +++GL  DG+   A  +  EM+ SG
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              ++ T   ++ G C+    ++A  LF  +    +  ++   NT+IDA  K  + E+A 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + +S+   G++P+ STY  +I  L +EG+VE   N+ + +  +G        N ++  L
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            + G+  KA + L    K++ +       T ++++  F +KGK  +
Sbjct: 764 LEKGEISKAGNYLS---KVDGKTISLEASTASLMLSLFSRKGKYRE 806



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 17/204 (8%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D  CRN  I D L+L              F+     G+K + ++   +L  L  +G+   
Sbjct: 586 DGYCRNGRIDDGLIL--------------FREMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            + +  EM      +++ +   +L GLC+    ++A  + + + ++ V   +   N +ID
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMID 691

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
              K   + K  +A+ +F  +   G++PN  T+  +I    K+ ++  A  +F  M   G
Sbjct: 692 AMYK---VRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748

Query: 290 IAAGVVTYNSLINGLCVDGKLDEA 313
            A      N++I  L   G++ +A
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKA 772


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 193/354 (54%), Gaps = 9/354 (2%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL ++ +   +  V  +YK+M    I  N  + N ++N  C   +L  A  ++
Sbjct: 9   SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 68

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            D+  LG  P   T+  LI G C +G IG+   A  +F  M   G  P+ +T+ TLI+G 
Sbjct: 69  GDILKLGYQPSTATFTTLIRGLCVEGKIGE---ALQLFDKMTGEGFQPDVLTYGTLINGL 125

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CKD  ++ A+ +F +M + GI+    TY+SLI+GLC+ G   EA+ L   M+   + P+ 
Sbjct: 126 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 185

Query: 330 VTSNALINGFCKKKLVE---KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           +T N L++  CK+ +++   KA  LF+++S+QGL P  +TYNTLI   C  GR+ DA A+
Sbjct: 186 LTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M+  G +PD+ TY  L   L +   +     ++  +    +   +  Y+I++  +C+
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 305

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
            G+ + A  L     K+  +   P++ TY ++I G CQ+G L +A+ L  E+ E
Sbjct: 306 AGELEAARDLFS---KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 192/352 (54%), Gaps = 9/352 (2%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R R   ++  F+ +L  + +    +    + + M S G+     T NILI+ +C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +G  +   +V  D+++ G  P+  TF TLI G C +  I  A+++F++M   G    V+T
Sbjct: 61  LGFAF---SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLT 117

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y +LINGLC D +L EA++L  +M+A G+ PN  T ++LI+G C     ++A  LF  + 
Sbjct: 118 YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 177

Query: 357 EQGLSPSVITYNTLIDAYCKEGR---MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + P  +T+NTL+DA CKEG    M+ A  +   M  +G++PD  TYN LI GL   G
Sbjct: 178 HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +     + +E+V  G    LVTY IL   LCK+ +  +A+ LL     +E     P+I 
Sbjct: 238 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK---VIEGTNLDPDIH 294

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            Y++++ G C+ G+LE A  L ++L  KGL P+  TY I+   + ++G + +
Sbjct: 295 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 346



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 10/305 (3%)

Query: 134 LGFEAFKRAGD---YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           LGF AF   GD    G + S  +   L+R L  EGK  +   ++ +M     + ++ ++ 
Sbjct: 61  LGF-AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            ++NGLCK  +L +A  +  DM + G+SP   TY+ LI G C    +G   +A  +F  M
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI---LGHWKEAIRLFYAM 176

Query: 251 VENGILPNEVTFNTLIDGFCKDENIS---AAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           +   I+P+++TFNTL+D  CK+  I     AM +FEEM   G+    VTYN+LI+GLC  
Sbjct: 177 IHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 236

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+L +A+AL  EM+  G  P++VT   L +  CK   + +A VL   I    L P +  Y
Sbjct: 237 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 296

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + ++D  C+ G +E A  + + +  +G+ PDV TY  +I GL ++G +     +  E+  
Sbjct: 297 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356

Query: 428 NGMRA 432
           N + +
Sbjct: 357 NDIES 361



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 143/269 (53%), Gaps = 1/269 (0%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F +    G +  VL+   L+  L K+ +  +   ++ +M  + I  N  +++ +++
Sbjct: 99  ALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 158

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC  G   +A  +   M    + P  +T+N L+D  CK+G I  M KA  +F++M + G
Sbjct: 159 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQG 218

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           ++P+ VT+NTLI G C    +  A+ +F EM  +G    +VTY  L + LC + +L EA+
Sbjct: 219 LIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAM 278

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L   +  + L P++   + +++G C+   +E AR LF  +S +GL P V TY  +I+  
Sbjct: 279 VLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 338

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           C++G + +A  +   M D   +   ST++
Sbjct: 339 CQQGLLAEASKLFGEM-DENDIESYSTFS 366


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 41/436 (9%)

Query: 139 FKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            +R G D     +  S N ++  + + G+  D   V+ EM  R +  N  ++N +++G  
Sbjct: 50  LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 109

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K G L     + + M   G+ P  +TYN+L+ G C+ G   +M +  A+  +M    ++P
Sbjct: 110 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG---RMGETSALLDEMASQKMVP 166

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T++ L DG  ++ +  A + +F +   +G+  G  T + L+NGLC DGK+  A  + 
Sbjct: 167 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 226

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++ +GL P  V  N LING+C+   +E A   F  +  + + P  ITYN LI+  CK 
Sbjct: 227 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 286

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ +A  +   M D GV P V T+N LI    R G +E    +++E+  NG++  +V+Y
Sbjct: 287 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 346

Query: 438 NILVGALCKDGKSKKAVSLLDEMF--------------------------------KMEK 465
             +V A CK+GK  +AV++LD+MF                                KM+ 
Sbjct: 347 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 406

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP- 524
               P+IVTYN+LIKG C + ++ +A  ++N L    LIP+  +Y  +      +G I  
Sbjct: 407 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 466

Query: 525 --DIEG--HMYNISGT 536
             D++   H Y I  T
Sbjct: 467 ALDLQQRMHKYGIKST 482



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 41/442 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  ++K      GF    +   +GLK + ++ N LL  L + G+  +   + 
Sbjct: 97  NHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 156

Query: 175 KEMKRRR--------------IELNLDS---------------------FNFVLNGLCKA 199
            EM  ++              +  N DS                      + +LNGLCK 
Sbjct: 157 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKD 216

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK++ A ++++ + + G+ P  V YN LI+GYC+ G   ++  A + F  M    I P+ 
Sbjct: 217 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELEGAFSTFGQMKSRHIKPDH 273

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+N LI+G CK E I+ A  +  EM  +G+   V T+N+LI+     G+L++   +  E
Sbjct: 274 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 333

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GLKPNVV+  +++N FCK   + +A  + DD+  + + P+   YN +IDAY + G 
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            + AF +   M   G+ P + TYN LI GL  +  +     I+N L N+ +    V+YN 
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 453

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ A C  G   KA   LD   +M K      + TY+ LI G    G+L +   L  +++
Sbjct: 454 LISACCYRGNIDKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510

Query: 500 EKGLIPNQTTYQIVREEMMEKG 521
           +  ++P+   + I+ E   + G
Sbjct: 511 QNNVVPSNAIHNIMVEAYSKYG 532



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 16/404 (3%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMF---VKNGKFTSVSTIFHAL----STCSDSLCRNSII 118
           T  LL  +   K  P   ++  +F    +NG   ++ ++F        T  D  C  SI+
Sbjct: 152 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC--SIL 209

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ L     K+ K  +  E  +   + GL  + +  N L+    + G+ E     + +MK
Sbjct: 210 LNGL----CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 265

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R I+ +  ++N ++NGLCKA ++  A D++ +M+  GV+P V T+N LID Y   G  G
Sbjct: 266 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAY---GRTG 322

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ K   V  +M ENG+ PN V++ ++++ FCK+  I  A+ + ++M    +      YN
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           ++I+     G  D+A  L ++M ++G+ P++VT N LI G C +  + +A  + + +S  
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 442

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            L P  ++YNTLI A C  G ++ A  ++  M   G+   V TY+ LI+GL   G +  +
Sbjct: 443 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 502

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             +  +++ N +      +NI+V A  K G   KA  L  EM +
Sbjct: 503 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 23/332 (6%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP-NEVTFNTLIDGFC 270
           + S G  P    +N  +      G +G+   A  + + M  +G  P N  ++N +I G  
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGE---AVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +      A++VF+EM    +    +TYN++I+G    G L+    LRD+M+  GLKPN +
Sbjct: 75  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L++G C+   + +   L D+++ Q + P   TY+ L D   + G  +   ++    
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L  GV     T + L+ GL ++G V     ++  LVN G+    V YN L+   C+ G+ 
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A S   +   M+     P+ +TYN LI G C+  ++ +A  LL E+ + G+ P   T+
Sbjct: 255 EGAFSTFGQ---MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311

Query: 511 Q----------------IVREEMMEKGFIPDI 526
                            IV  EM E G  P++
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 343



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 9/369 (2%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           L L G+ L + V    Y      L+   K+GK +    +  +L      L    +I + L
Sbjct: 188 LSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAG--LVPTRVIYNTL 244

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  Y +  +    F  F +     +K   ++ N L+  L K  +  + + +  EM+   +
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
              +++FN +++   + G+L K   ++ +M+  G+ P VV+Y  +++ +CK    GK+ +
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN---GKIPE 361

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+  DM    +LPN   +N +ID + +      A  + E+M S+GI+  +VTYN LI 
Sbjct: 362 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 421

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   ++ EA  + + +    L P+ V+ N LI+  C +  ++KA  L   + + G+  
Sbjct: 422 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 481

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN---VEGVR 419
           +V TY+ LI      GR+ +   +   M+   V+P  + +N ++   S+ GN    E +R
Sbjct: 482 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 541

Query: 420 NIMNELVNN 428
             M +  NN
Sbjct: 542 KEMLQKRNN 550


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 218/413 (52%), Gaps = 6/413 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++H L   +   + +S + + V      S S +F A+     +   +  +   L+ AY++
Sbjct: 6   MIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIAAYLE 65

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           +       E ++   ++       +C ++L  L+K   F+ V   Y+E+       +L  
Sbjct: 66  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYF 125

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + +   +   
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSX-- 183

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +LI+G C +G
Sbjct: 184 -MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           ++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL P  ITY 
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 302

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI+  CKEG ++ AF  R  M+   +  D   Y  LI+G  +EG       ++ E+++ 
Sbjct: 303 TLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSV 362

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           G++    TY +++   CK G       LL EM   +++   P++VTYNVL+ G
Sbjct: 363 GLKPDARTYTMIINEFCKXGDVWXGSKLLKEM---QRDGHVPSVVTYNVLMNG 412



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 171 XGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 290

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 291 VKGLKPDKITYTTLINGCCKEGD-------LDSAFEHRKRMIQENIRLDEVAYTALISGX 343

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  + G
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXG 382



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 50  RSDIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 166

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++     +   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 167 GYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 226

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 286

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+   C++
Sbjct: 287 DEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQE 346

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+ G +   + LL E+   G +P+ 
Sbjct: 347 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSV 403

Query: 508 TTYQIV 513
            TY ++
Sbjct: 404 VTYNVL 409



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 34/232 (14%)

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAM 386
           ++ + +LI     +K    A  +F  I E +G   S +  ++ LI AY + G + DA   
Sbjct: 16  LLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIAAYLESGFLRDAIEC 75

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
                +        T   ++  L +    + V     E++  G  A L  +NIL+   CK
Sbjct: 76  YRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 135

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           DG  + A S+ D +       KW   P++V+YN L+ G+ + G L++   L + +L  G+
Sbjct: 136 DGDIRVAQSVFDAI------TKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGV 189

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD-------IEGHMYN 532
            P+  TY +                + +EM+ KG +P+       I+GH  N
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  +   LL  L+  G   +   V+  M+      +   +  +++GLC+AG+  +A
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E+  S G  P +V YN LIDGYC     G+M  A  VF+ M  N   PN  T+  L
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   +  AM +F  M   G+   VVTY +LI G C +G L  A  L   M  +GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T + LI+  CK++ VE+A++    + ++G+  + + Y +LID  CK G+++ A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  G +PD  +Y+ LI GL R+  +     ++ +++  G++A  VTY I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++  S+    + D+M         P+IVTY V ++ +C++G++EDA  ++ +++++G+ P
Sbjct: 434 REVGSEGPKKIFDKMIATGIN---PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 506 NQTTY 510
           N  TY
Sbjct: 491 NLVTY 495



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 206/409 (50%), Gaps = 42/409 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +++  N L+      G+ E    V++ M   R   N+ ++  +++GLCK+GK+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VVTY  LI G C +G +   ++   +   M  NG++PN+ TF+ L
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR---LLHLMETNGLVPNDWTFSVL 323

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK E +  A      +   G+    V Y SLI+GLC  GK+D A  L  +M++ G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID------------- 372
            P+  + ++LI+G C++K + +A ++ +D+ E+G+  S +TY  +ID             
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 373 ----------------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                 +YC+EGRMEDA +M   M+DRGV P++ TYN LI G +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL--LDEMFKMEKEKK 468
             G V    +    +V  G +    +Y +L+  + K   S  +V +  + +M  ++ E  
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ-ESN 562

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           +  IV + +LI G  QKG + + + LL+ + E G  P+ T   ++  E+
Sbjct: 563 YDEIV-WKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEI 610



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 195/388 (50%), Gaps = 27/388 (6%)

Query: 152 LSC-NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           L C N LL AL +   F D+E +   M  R    NL ++  ++N  C AG +  A   + 
Sbjct: 41  LRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +   G++P    Y   + GYC+ G    +  A  VF  M   G L    T+  L+ G  
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAG---MLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +  AM VF  M +   A     Y ++++GLC  G+ +EA  L +E M++G +PN+V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             NALI+G+C    +E A  +F+ +     SP+V TY  LI   CK G++E A  + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G+ P+V TY  LI G   EG+++    +++ +  NG+     T+++L+ ALCK  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++A   L  + K   +    N V Y  LI G C+ GK++ A+ L+ +++ +G +P+  +Y
Sbjct: 334 EEAQLFLGSLVKKGVKV---NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 511 Q----------------IVREEMMEKGF 522
                            ++ E+MMEKG 
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 22/359 (6%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           LN L  A   ++    ME + S   +  + TY  LI+ YC  G I     A      ++ 
Sbjct: 44  LNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIP---AAKQHLTSLLH 100

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+   + + + G+C+   ++ A +VF  M   G      TY +L++GL   G + E
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+A+   M A    P+      +++G C+    E+A VL ++    G  P+++ YN LID
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YC  G ME A  +   M      P+V TY  LI GL + G VE    + + +V  G+  
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VTY  L+   C +G  + A  LL     ME     PN  T++VLI   C++ K+E+A 
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLH---LMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337

Query: 493 GLLNELLEKGLIPNQTTYQIV------------REEMMEK----GFIPDIEGHMYNISG 535
             L  L++KG+  N+  Y  +             +E+M+K    GF+PD   +   I G
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 205/405 (50%), Gaps = 36/405 (8%)

Query: 139 FKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            +R G D     +  S N ++  + + G+  D   V+ EM  R +  N  ++N +++G  
Sbjct: 2   LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 61

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K G L     + + M   G+ P  +TYN+L+ G C+ G   +M +  A+  +M    ++P
Sbjct: 62  KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG---RMGETSALLDEMASQKMVP 118

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T++ L DG  ++ +  A + +F +   +G+  G  T + L+NGLC DGK+  A  + 
Sbjct: 119 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++ +GL P  V  N LING+C+   +E A   F  +  + + P  ITYN LI+  CK 
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ +A  +   M D GV P V T+N LI    R G +E    +++E+  NG++  +V+Y
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298

Query: 438 NILVGALCKDGKSKKAVSLLDEMF--------------------------------KMEK 465
             +V A CK+GK  +AV++LD+MF                                KM+ 
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
               P+IVTYN+LIKG C + ++ +A  ++N L    LIP+  +Y
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 403



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 41/442 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  ++K      GF    +   +GLK + ++ N LL  L + G+  +   + 
Sbjct: 49  NHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 108

Query: 175 KEMKRRR--------------IELNLDS---------------------FNFVLNGLCKA 199
            EM  ++              +  N DS                      + +LNGLCK 
Sbjct: 109 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKD 168

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           GK++ A ++++ + + G+ P  V YN LI+GYC+ G   ++  A + F  M    I P+ 
Sbjct: 169 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELEGAFSTFGQMKSRHIKPDH 225

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           +T+N LI+G CK E I+ A  +  EM  +G+   V T+N+LI+     G+L++   +  E
Sbjct: 226 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 285

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +GLKPNVV+  +++N FCK   + +A  + DD+  + + P+   YN +IDAY + G 
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
            + AF +   M   G+ P + TYN LI GL  +  +     I+N L N+ +    V+YN 
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ A C  G   KA   LD   +M K      + TY+ LI G    G+L +   L  +++
Sbjct: 406 LISACCYRGNIDKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462

Query: 500 EKGLIPNQTTYQIVREEMMEKG 521
           +  ++P+   + I+ E   + G
Sbjct: 463 QNNVVPSNAIHNIMVEAYSKYG 484



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 16/404 (3%)

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMF---VKNGKFTSVSTIFHAL----STCSDSLCRNSII 118
           T  LL  +   K  P   ++  +F    +NG   ++ ++F        T  D  C  SI+
Sbjct: 104 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC--SIL 161

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           ++ L     K+ K  +  E  +   + GL  + +  N L+    + G+ E     + +MK
Sbjct: 162 LNGL----CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 217

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            R I+ +  ++N ++NGLCKA ++  A D++ +M+  GV+P V T+N LID Y   G  G
Sbjct: 218 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAY---GRTG 274

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           ++ K   V  +M ENG+ PN V++ ++++ FCK+  I  A+ + ++M    +      YN
Sbjct: 275 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 334

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           ++I+     G  D+A  L ++M ++G+ P++VT N LI G C +  + +A  + + +S  
Sbjct: 335 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 394

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            L P  ++YNTLI A C  G ++ A  ++  M   G+   V TY+ LI+GL   G +  +
Sbjct: 395 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 454

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             +  +++ N +      +NI+V A  K G   KA  L  EM +
Sbjct: 455 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 19/286 (6%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  ++N +I G  +      A++VF+EM    +    +TYN++I+G    G L+    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           RD+M+  GLKPN +T N L++G C+   + +   L D+++ Q + P   TY+ L D   +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G  +   ++    L  GV     T + L+ GL ++G V     ++  LVN G+    V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   C+ G+ + A S   +   M+     P+ +TYN LI G C+  ++ +A  LL 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQ---MKSRHIKPDHITYNALINGLCKAERITNAQDLLM 249

Query: 497 ELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPDI 526
           E+ + G+ P   T+                 IV  EM E G  P++
Sbjct: 250 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 295



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 9/369 (2%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           L L G+ L + V    Y      L+   K+GK +    +  +L   +  L    +I + L
Sbjct: 140 LSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSL--VNAGLVPTRVIYNTL 196

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
           +  Y +  +    F  F +     +K   ++ N L+  L K  +  + + +  EM+   +
Sbjct: 197 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 256

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
              +++FN +++   + G+L K   ++ +M+  G+ P VV+Y  +++ +CK    GK+ +
Sbjct: 257 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN---GKIPE 313

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+  DM    +LPN   +N +ID + +      A  + E+M S+GI+  +VTYN LI 
Sbjct: 314 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 373

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC   ++ EA  + + +    L P+ V+ N LI+  C +  ++KA  L   + + G+  
Sbjct: 374 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 433

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN---VEGVR 419
           +V TY+ LI      GR+ +   +   M+   V+P  + +N ++   S+ GN    E +R
Sbjct: 434 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 493

Query: 420 NIMNELVNN 428
             M +  NN
Sbjct: 494 KEMLQKRNN 502


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  +   LL  L+  G   +   V+  M+      +   +  +++GLC+AG+  +A
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E+  S G  P +V YN LIDGYC     G+M  A  VF+ M  N   PN  T+  L
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   +  AM +F  M   G+   VVTY +LI G C +G L  A  L   M  +GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T + LI+  CK++ VE+A++    + ++G+  + + Y +LID  CK G+++ A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  G +PD  +Y+ LI GL R+  +     ++ +++  G++A  VTY I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++  S+    + D+M         P+IVTY V ++ +C++G++EDA  ++ +++++G+ P
Sbjct: 434 REVGSEGPKKIFDKMIATGIN---PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 506 NQTTY 510
           N  TY
Sbjct: 491 NLVTY 495



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 47/409 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +++  N L+      G+ E    V++ M   R   N+ ++  +++GLCK+GK+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VVTY  LI G C +G +   ++   +   M  NG++PN+ TF+ L
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR---LLHLMETNGLVPNDWTFSVL 323

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK E +  A      +   G+    V Y SLI+GLC  GK+D A  L  +M++ G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID------------- 372
            P+  + ++LI+G C++K + +A ++ +D+ E+G+  S +TY  +ID             
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 373 ----------------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                 +YC+EGRMEDA +M   M+DRGV P++ TYN LI G +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL--------LDEMFK 462
             G V    +    +V  G +    +Y +L+  + K   S  +V +        L  + +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 463 MEKEKKWPNIV-TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              E++ P     Y+  I+  C+  +LE+A      +    L P++  Y
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 196/388 (50%), Gaps = 27/388 (6%)

Query: 152 LSC-NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           L C N LL AL +   F D+E +   M  R    NL ++  ++N  C AG +  A   + 
Sbjct: 41  LRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +   G++P    Y   + GYC+ G    +  A  VF  M   G L    T+  L+ G  
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAG---MLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +  AM VF  M +   A     Y ++++GLC  G+ +EA  L +E M++G +PN+V
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             NALI+G+C    +E A  +F+ +     SP+V TY  LI   CK G++E A  + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G+ P+V TY  LI G   EG+++    +++ +  NG+     T+++L+ ALCK  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++A   L  + K  K  K  N V Y  LI G C+ GK++ A+ L+ +++ +G +P+  +Y
Sbjct: 334 EEAQLFLGSLVK--KGVKV-NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 511 Q----------------IVREEMMEKGF 522
                            ++ E+MMEKG 
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 55/377 (14%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P +R++   +H   K+GK      +F  +      L  N +    L+            F
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRM--VEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                    GL  +  + + L+ AL K  K E+ +     + ++ +++N   +  +++GL
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK GK++ A ++M+ M S G  P   +Y+ LIDG C++    K+ +A  + +DM+E GI 
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK---KLSQATLMLEDMMEKGIQ 419

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+  +ID   ++       K+F++M + GI   +VTY   +   C +G++++A ++
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKA---------------------------- 348
             +M+  G+ PN+VT N LI G+    LV +A                            
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539

Query: 349 -------------------RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                              +VL +DI+E+ L  +   Y+  I   C+  R+E+A      
Sbjct: 540 KSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMG 599

Query: 390 MLDRGVLPDVSTYNCLI 406
           M +  + P    Y  +I
Sbjct: 600 MQNANLTPSEDVYTSII 616



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 50/274 (18%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K + +    L+  L K GK +  + + ++M       +  S++ +++GLC+  KL++A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + ++EDM   G+    VTY I+ID   ++ G     K   +F  M+  GI P+ VT+   
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK---IFDKMIATGINPDIVTYTVF 463

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +  +C++  +  A  +  +M   G+   +VTYN+LI G    G + +A +  + M+  G 
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523

Query: 326 KPN----------VVTSNA-------------------------------------LING 338
           KPN          VV  ++                                      I  
Sbjct: 524 KPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRC 583

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            C+   +E+A+  F  +    L+PS   Y ++ID
Sbjct: 584 LCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 203/387 (52%), Gaps = 22/387 (5%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LLR+L +  +FE+   V++ M  +    N+ S++ ++ GLC+  K+++A++++ +M   G
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P VVTY  L+ G CK   +GK+ +A  +F  MV  G  P+ V +N LIDGF K  ++ 
Sbjct: 118 HQPNVVTYGSLLSGLCK---MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++FEEM   G    V TYNSL++G    G+     +L  +M+  G  PN+ T N L+
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GFCK   + +A  LF ++   G  P V++YNTLI   C +G+  +A  +   M+  GV 
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN LI G S+ G ++    +  E+  +G+     +Y+ ++  LC+ GK   A  +
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP-----NQTTYQ 511
             +M         P+      L+ G C+  +L ++  L   +++   +P     N   Y+
Sbjct: 355 FKDMI---ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411

Query: 512 IVR-----------EEMMEKGFIPDIE 527
           + +            E+ E+GF PD+E
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVE 438



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 185/359 (51%), Gaps = 6/359 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            LS N LL  L K G+ + V   Y +M       N  ++ ++L  LC+A +  +A  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + G SP V +Y+ILI G C+     K+ +A  +  +M++ G  PN VT+ +L+ G C
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRG---QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +  A+ +F  M   G     V YN LI+G    G + EA  L +EM+  G  P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+L++GF +K    + + LF D+  QG  P++ T+N L+D +CK G M +A  +   M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  PDV +YN LI G+  +G     + ++ E++ +G+   +V+YNIL+    K G  
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             A+ L  E+ K   E   P+  +Y+ +I   C+ GK+  A  +  +++  G  P+   
Sbjct: 314 DHAIKLFYEIPKSGLE---PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 163/293 (55%), Gaps = 6/293 (2%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
            ++YN L++   K G    +Y     + DM+  G +PN  T+  L+   C+ +    A  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVY---GTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           VF  M + G +  V +Y+ LI GLC   K+DEA  L +EM+  G +PNVVT  +L++G C
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +++A  LF  +  +G  P  + YN LID + K+G M +A+ +   ML++G +P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN L++G SR+G    V+++  +++  G    + T+N L+   CK G   +A  L  EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             +      P++V+YN LI+G C KGK  +A  LL E++  G+ P+  +Y I+
Sbjct: 254 RSLGCP---PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 185/368 (50%), Gaps = 23/368 (6%)

Query: 60  SHSLLLTG-----------RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL 105
           S+S+L+ G            LL+ ++     P + ++   L    K GK      +F  +
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 106 --STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
               C      + ++ ++L+  + K       +  F+   + G   +V + N LL    +
Sbjct: 149 VYRGCPP----DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           +G+F  V+ ++K+M R+    N+ +FN +L+G CK G + +A  +  +M+SLG  P VV+
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN LI G C KG   K ++A  + ++M+ +G+ P+ V++N LIDG+ K   +  A+K+F 
Sbjct: 265 YNTLIRGMCSKG---KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E+   G+     +Y+++I+ LC  GK+  A  +  +M+A+G  P+      L+ G C+ +
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            + ++  LF  + +    P +  YN L+   CK  R +D   + + + +RG  PDV    
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISK 441

Query: 404 CLIAGLSR 411
            ++  L R
Sbjct: 442 VILETLRR 449



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 28/385 (7%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR------------ 114
           G LL SL  A+++ + RS        G     S    + S     LCR            
Sbjct: 56  GYLLRSLCQAQRFEEARSVFRGMAAQG----CSPNVFSYSILIAGLCRGQKVDEAAELLN 111

Query: 115 ---------NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
                    N +    L+    K  K     + F R    G     +  N L+    K+G
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
              +   +++EM  +     + ++N +L+G  + G+  +   + +DM   G  P + T+N
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DG+CK   +G M +A  +F +M   G  P+ V++NTLI G C       A ++  EM
Sbjct: 232 NLLDGFCK---MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+   +V+YN LI+G    G LD A+ L  E+  SGL+P+  + + +I+  C+   V
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A V+F D+   G +P       L+   C+  R+ ++  +  +M+    +P +  YN L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 406 IAGLSREGNVEGVRNIMNELVNNGM 430
           +  L +    + V  I +EL   G 
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTERGF 433



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 4/233 (1%)

Query: 279 MKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           M  F+  GS      G ++YN L+  L   G+ D      ++M+A+G  PN  T   L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             C+ +  E+AR +F  ++ QG SP+V +Y+ LI   C+  ++++A  + N M+D G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V TY  L++GL + G ++   ++ + +V  G     V YN+L+    K G   +A  L 
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +EM    ++   P + TYN L+ GF +KG+      L  ++L +G +PN  T+
Sbjct: 181 EEML---EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
             ++ N L+    K    +     ++D+   G  P+  TY  L+ + C+  R E+A ++ 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +G  P+V +Y+ LIAGL R   V+    ++NE+++ G +  +VTY  L+  LCK 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK K+AV L     +M      P+ V YNVLI GF +KG + +A  L             
Sbjct: 136 GKLKEAVDLFS---RMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF------------ 180

Query: 508 TTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
                  EEM+EKG IP +  +   +SG S
Sbjct: 181 -------EEMLEKGCIPTVFTYNSLLSGFS 203


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 250/524 (47%), Gaps = 73/524 (13%)

Query: 68  RLLHSLVVAKKYPKIRSF--LHMFVKNGKFTSVSTIFHAL-----STCSDSLCRNSIIID 120
           +L   ++   +   +R+F  L   V   + +S S +  +L       CS  +  +S    
Sbjct: 37  KLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYT 96

Query: 121 MLMLAYVKNMKPHLGFEAFK---RAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKE 176
           +L+  + +  +   GF AF    + G + L ++V+   QLL+ L    +  E  + + + 
Sbjct: 97  ILIGCFCRMGRLKHGFAAFGLILKTG-WSLNNTVIF-GQLLKGLCDAKRVDEATDILLRR 154

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG---VSPKVVTYNILIDGYCK 233
           M      LN+ S+N +L GLC   +  +A ++M  M   G    +P VVTY  +IDG CK
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
              + +   A  VF+ M++ G+ PN  T+  LI G+         +++ +EM +HG+   
Sbjct: 215 AQMVDR---AKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS--------------------- 332
            V Y  L++ LC +G+  EA  + D ++  G+KP+V                        
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 333 --------------NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
                         N + N + KK ++++A  +FD + +Q LSP V+ Y  LIDA CK G
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R++DA    N M++ GV PD+  ++ L+ GL      E    +  E+++ G+R     +N
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+  LC++G+  +A  L+D M +++     P++++YN L+ G C  G++++A  LL+ +
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVR---PDVISYNTLVDGHCLTGRIDEAAKLLDVM 508

Query: 499 LEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
           +  GL P++ TY  +                  EM+ KG  P +
Sbjct: 509 VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 222/447 (49%), Gaps = 16/447 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++  GK+  V  +   +ST    L  + +I  +L+    KN +       F     
Sbjct: 243 LIHGYLSTGKWKEVVQMLQEMST--HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR 300

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K  V     LL     EG   ++      M R  +  +   FN + N   K   +++
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE 360

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I + M+   +SP VV Y  LID  CK   +G++  A   F  M+  G+ P+   F++
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCK---LGRVDDAVLKFNQMINEGVTPDIFVFSS 417

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C  +    A K+F E+   GI      +N L+  LC +G++ EA  L D M+   
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+V++ N L++G C    +++A  L D +   GL P   TYNTL+  YCK  R++DA+
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAY 537

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++   ML +G+ P V TYN ++ GL + G     + +   ++NN  +  + TY I++  L
Sbjct: 538 SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGL 597

Query: 445 CKDGKSKKAVSLLDEMFKMEK----EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           C++       + +DE FKM +    +    +I T N++I    + G+ EDA  L   +  
Sbjct: 598 CRN-------NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISA 650

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIE 527
            GL+P+  TY+++ E ++++G + +++
Sbjct: 651 YGLVPDVETYRLIAENLIKEGSLEELD 677



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 170/340 (50%), Gaps = 4/340 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIM-EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           F  +L GLC A ++++A+DI+   M   G +  V++YNIL+ G C +    +  +   + 
Sbjct: 131 FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM 190

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            D  +    PN VT+ T+IDG CK + +  A  VF+ M   G+     TY  LI+G    
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLST 250

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK  E V +  EM   GL+P+ V    L++  CK     +AR +FD +  +G+ P V  Y
Sbjct: 251 GKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIY 310

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             L+  Y  EG + +  +  + M+  GV PD   +N +    +++  ++   +I +++  
Sbjct: 311 GILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQ 370

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             +  G+V Y  L+ ALCK G+   AV   ++M     E   P+I  ++ L+ G C   K
Sbjct: 371 QWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMI---NEGVTPDIFVFSSLVYGLCTVDK 427

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            E A  L  E+L++G+  N   + I+   +  +G + + +
Sbjct: 428 WEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQ 467



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 202/418 (48%), Gaps = 33/418 (7%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           G LLH         ++ SFL + V+NG    VS   H  +   ++  + ++I D  M  +
Sbjct: 311 GILLHGYATEGALSEMHSFLDLMVRNG----VSPDHHIFNIMFNAYAKKAMI-DEAMHIF 365

Query: 127 VKNMKPHLG---------FEAFKRAG-------------DYGLKSSVLSCNQLLRALVKE 164
            K  +  L           +A  + G             + G+   +   + L+  L   
Sbjct: 366 DKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTV 425

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
            K+E  E ++ E+  + I LN   FN ++  LC+ G++ +A  +++ M  + V P V++Y
Sbjct: 426 DKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N L+DG+C  G I +   A  +   MV  G+ P+E T+NTL+ G+CK   I  A  +F E
Sbjct: 486 NTLVDGHCLTGRIDE---AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFRE 542

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+  GVVTYN++++GL   G+  EA  L   M+ +  K ++ T   ++NG C+   
Sbjct: 543 MLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNF 602

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V++A  +F  +  + L   + T N +I A  K GR EDA  +  ++   G++PDV TY  
Sbjct: 603 VDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRL 662

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
           +   L +EG++E +  + + +  NG        N LV  L   G   +A   +S LDE
Sbjct: 663 IAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDE 720



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 15/315 (4%)

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA---MKVFE 283
           +I G  + G +G +  A  +F +M+      +  TFN L+    +    SA+   + +F 
Sbjct: 20  VIAGRARSGSLG-LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFN 78

Query: 284 EM---GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK-PNVVTSNALINGF 339
            M    S  +A    TY  LI   C  G+L    A    ++ +G    N V    L+ G 
Sbjct: 79  RMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGL 138

Query: 340 CKKKLVEKAR-VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG---V 395
           C  K V++A  +L   + E G + +VI+YN L+   C E R E+A  + + M D G    
Sbjct: 139 CDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH 198

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            P+V TY  +I GL +   V+  + +   +++ G+R    TY  L+      GK K+ V 
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           +L EM         P+ V Y VL+   C+ G+  +A  + + L+ KG+ P+ T Y I+  
Sbjct: 259 MLQEM---STHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLH 315

Query: 516 EMMEKGFIPDIEGHM 530
               +G + ++   +
Sbjct: 316 GYATEGALSEMHSFL 330


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +  +   LL  L+  G   +   V+  M+      +   +  +++GLC+AG+  +A
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++E+  S G  P +V YN LIDGYC     G+M  A  VF+ M  N   PN  T+  L
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNA---GEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   +  AM +F  M   G+   VVTY +LI G C +G L  A  L   M  +GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T + LI+  CK++ VE+A++    + ++G+  + + Y +LID  CK G+++ A  
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+  G +PD  +Y+ LI GL R+  +     ++ +++  G++A  VTY I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           ++  S+    + D+M         P+IVTY V ++ +C++G++EDA  ++ +++++G+ P
Sbjct: 434 REVGSEGPKKIFDKMIATGIN---PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 506 NQTTY 510
           N  TY
Sbjct: 491 NLVTY 495



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 210/449 (46%), Gaps = 63/449 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + +++  N L+      G+ E    V++ M   R   N+ ++  +++GLCK+GK+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+ P VVTY  LI G C +G +   ++   +   M  NG++PN+ TF+ L
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR---LLHLMETNGLVPNDWTFSVL 323

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK E +  A      +   G+    V Y SLI+GLC  GK+D A  L  +M++ G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID------------- 372
            P+  + ++LI+G C++K + +A ++ +D+ E+G+  S +TY  +ID             
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 373 ----------------------AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                                 +YC+EGRMEDA +M   M+DRGV P++ TYN LI G +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL--------LDEMFK 462
             G V    +    +V  G +    +Y +L+  + K   S  +V +        L  + +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 463 MEKEKKWPNIV-TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------- 513
              E++ P     Y+  I+  C+  +LE+A      +    L P++  Y  +        
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLK 623

Query: 514 --------REEMMEKGFIPDIEGHMYNIS 534
                    + M + G++P +E +   IS
Sbjct: 624 ILTDALTLLDSMTKSGYLPHLESYRIIIS 652



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 196/388 (50%), Gaps = 27/388 (6%)

Query: 152 LSC-NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           L C N LL AL +   F D+E +   M  R    NL ++  ++N  C AG +  A   + 
Sbjct: 41  LRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            +   G++P    Y   + GYC+ G    +  A  VF  M   G L    T+  L+ G  
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAG---MLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +  AM VF  M +   A     Y ++++GLC  G+ +EA  L +E M++G +PN+V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             NALI+G+C    +E A  +F+ +     SP+V TY  LI   CK G++E A  + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           ++ G+ P+V TY  LI G   EG+++    +++ +  NG+     T+++L+ ALCK  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           ++A   L  + K  K  K  N V Y  LI G C+ GK++ A+ L+ +++ +G +P+  +Y
Sbjct: 334 EEAQLFLGSLVK--KGVKV-NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 511 Q----------------IVREEMMEKGF 522
                            ++ E+MMEKG 
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 218/488 (44%), Gaps = 58/488 (11%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P +R++   +H   K+GK      +F  +      L  N +    L+            F
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRM--VEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                    GL  +  + + L+ AL K  K E+ +     + ++ +++N   +  +++GL
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK GK++ A ++M+ M S G  P   +Y+ LIDG C++    K+ +A  + +DM+E GI 
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK---KLSQATLMLEDMMEKGIQ 419

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+  +ID   ++       K+F++M + GI   +VTY   +   C +G++++A ++
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKA---------------------------- 348
             +M+  G+ PN+VT N LI G+    LV +A                            
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539

Query: 349 -------------------RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                              +VL +DI+E+ L  +   Y+  I   C+  R+E+A      
Sbjct: 540 KSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMG 599

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +  + P    Y  +I    R   +     +++ +  +G    L +Y I++ +LC+ G 
Sbjct: 600 MQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGN 659

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            + A  +  ++  + KE  +  IV + +LI G  QKG + + + LL+ + E G  P+ T 
Sbjct: 660 FRTAKEVFGDL--LLKESNYDEIV-WKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI 716

Query: 510 YQIVREEM 517
             ++  E+
Sbjct: 717 NAMITGEI 724



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 22/359 (6%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           LN L  A   ++    ME + S   +  + TY  LI+ YC  G I     A      ++ 
Sbjct: 44  LNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIP---AAKQHLTSLLH 100

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G+ P+   + + + G+C+   ++ A +VF  M   G      TY +L++GL   G + E
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+A+   M A    P+      +++G C+    E+A VL ++    G  P+++ YN LID
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YC  G ME A  +   M      P+V TY  LI GL + G VE    + + +V  G+  
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VTY  L+   C +G  + A  LL     ME     PN  T++VLI   C++ K+E+A 
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLH---LMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337

Query: 493 GLLNELLEKGLIPNQTTYQIV------------REEMMEK----GFIPDIEGHMYNISG 535
             L  L++KG+  N+  Y  +             +E+M+K    GF+PD   +   I G
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 224/413 (54%), Gaps = 6/413 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I  + ++  ++K      GF  + +   +GLK +V++ N LL  L + G+  +   V 
Sbjct: 222 NHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVL 281

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  R++  +  +++ + +G  + G       + E+    GV     T +IL++G CK 
Sbjct: 282 DEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKD 341

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   K+ KA+ V + +V +G+L   V +NTLI+G+C+  ++  A  +F++M S  I    
Sbjct: 342 G---KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TYN+LINGL    ++ EA  L  EM  +G+ P+V T N LI+ + +   +EK  ++  D
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E+GL P+V++Y ++++A+CK G++ +A A+ + M  + VLP    YN +I      G+
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +    +  ++ ++G+   +VTYN+L+  LCK  +  +A  LLD    +      P++++
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLD---SLRNYGLAPDVIS 575

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           YN LI   C +   + A  L  E+ + G+ P+  TY+++   +   G + ++E
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 195/395 (49%), Gaps = 46/395 (11%)

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVT 223
           G+  DV   ++ +   R   +  ++N  +     AG L++A  ++  M   G  +P   +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 224 YNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           YN++I G  K G        DAV  F +M E  ++PN +T+NT+IDG  K  ++ +  ++
Sbjct: 191 YNVVIAGLWKAG-----TDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA------------------- 322
           + +M  HG+   V+TYN L++GLC  G++ E  A+ DEM +                   
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 323 ----------------SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
                            G+K    T + L+NG CK   + KA  +   +   GL  + + 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI+ YC+ G +E AF++   M  R + PD  TYN LI GL +   +    +++ E+ 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG+   + T+N L+ A  + G+ +K   +L +M   EK  K PN+V+Y  ++  FC+ G
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDM--QEKGLK-PNVVSYGSIVNAFCKNG 482

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           K+ +A  +L+++  K ++P    Y  + +  +E G
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECG 517



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 169/315 (53%), Gaps = 3/315 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  + +  N L+    + G  E    ++++MK R I  +  ++N ++NGL K  ++ +A
Sbjct: 358 GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEA 417

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++ +M+  GV+P V T+N LID Y   G  G++ K   +  DM E G+ PN V++ ++
Sbjct: 418 HDLVIEMEKNGVNPSVETFNTLIDAY---GRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ++ FCK+  I  A+ + ++M    +  G   YN++I+     G  D+A  L ++M +SG+
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++VT N LI G CK+  + +A  L D +   GL+P VI+YNTLI A C     + A  
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G+ P   TY  L + L   G V  + N+  ++++  +      YNI+V A  
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654

Query: 446 KDGKSKKAVSLLDEM 460
           K G+  K  +L  EM
Sbjct: 655 KCGEESKVEALRKEM 669



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 5/349 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+   K+GK +    +   L   +  L + ++I + L+  Y +       F  F++   
Sbjct: 334 LLNGLCKDGKISKAEEVLQTL--VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS 391

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
             ++   ++ N L+  L K  +  +   +  EM++  +  ++++FN +++   +AG+L K
Sbjct: 392 RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEK 451

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              I+ DM+  G+ P VV+Y  +++ +CK G   K+ +A A+  DM    +LP    +N 
Sbjct: 452 CFIILSDMQEKGLKPNVVSYGSIVNAFCKNG---KILEAVAILDDMFIKDVLPGAQVYNA 508

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID + +  +   A  + E+M S G+   +VTYN LI GLC   ++ EA  L D +   G
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L P+V++ N LI+  C +   ++A  L  ++ + G+ PS  TY  L  +    GR+ +  
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            +   MLD+ V+P    YN ++   ++ G    V  +  E+ + G+  G
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG 677



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 38/222 (17%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +V+S   ++ A  K GK  +   +  +M  + +      +N +++   + G  ++A
Sbjct: 463 GLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQA 522

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E MKS GV P +VTYN+LI G CK+  I +   A+ +   +   G+ P+ +++NTL
Sbjct: 523 FMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISE---AEELLDSLRNYGLAPDVISYNTL 579

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE------------- 312
           I   C   N   A+++ +EM   GI     TY  L + L   G++ E             
Sbjct: 580 ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639

Query: 313 ----------------------AVALRDEMMASGLKPNVVTS 332
                                   ALR EM   G+     TS
Sbjct: 640 VPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTS 681



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI----IIDMLMLAYVKNMKPHLGFEAF 139
           S ++ F KNGK      I  A++   D   ++ +    + + ++ AY++       F   
Sbjct: 473 SIVNAFCKNGK------ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLA 526

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           ++    G+  S+++ N L++ L K+ +  + E +   ++   +  ++ S+N +++  C  
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
              ++A ++ ++M   G+ P   TY +L   +   GG G++++ + +++ M++  ++P  
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRML---FSSLGGAGRVHEMENLYQQMLDKDVVPCS 643

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
             +N ++D + K    S    + +EM   GIA G   Y S+ N
Sbjct: 644 GIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG--DYTSMTN 684


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 243/520 (46%), Gaps = 68/520 (13%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDMLML 124
           L  S++ ++  P +  F  +F   G           L+ C       +  +   +++++ 
Sbjct: 77  LFQSMLRSRPLPTVIDFNRLF---GLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIE 183
            + +  K    F A  +    G + + ++ N LL  L  EG+ FE VE V   +  + + 
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +L + N ++NGLC   ++++A D++  M + G  P   TY  +++  CK G       A
Sbjct: 194 -DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS---A 249

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + + M    I P+ VT+  +ID  CKD  +  A+  F EM + GI A V TYNSLI  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 304 LCV-----------------------------------DGKLDEAVALRDEMMASGLKPN 328
            C                                    +GKL EA  L +EM+  G++PN
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPN 369

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            +T N+LI G C  K +++A  + D +  +G  P + TYN LI+ +CK  +++D   +  
Sbjct: 370 TITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR 429

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  RG++ D  TY+ LI G  +   +   + +  E+V+ G+  G++TY IL+  LC +G
Sbjct: 430 KMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG 489

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           + ++A+ +LD+M K + E    +I  YN++I G C   K++DA  L   L  KG+  +  
Sbjct: 490 ELEEALGILDQMHKCKME---LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546

Query: 509 TYQIVR----------------EEMMEKGFIPDIEGHMYN 532
           +Y I+                  +M E G+ PD  G  YN
Sbjct: 547 SYNIMLSGLCKRSSLSEADALFRKMKEDGYEPD--GCTYN 584



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 211/387 (54%), Gaps = 12/387 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V++   ++  L K+G+ +D    + EM+ + I+ N+ ++N ++   C  G+ +  +
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++ DM +  ++P VVT++ LID   K+G   K+ +A  ++ +M+  GI PN +T+N+LI
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEG---KLTEAKDLYNEMITRGIEPNTITYNSLI 377

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G C D+ +  A ++ + M S G    + TYN LING C   ++D+ + L  +M   G+ 
Sbjct: 378 YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            + VT + LI GFC+ + +  A+ +F ++  QG+ P ++TY  L+D  C  G +E+A  +
Sbjct: 438 ADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGI 497

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M    +  D+  YN +I G+     V+   ++   L + G++  + +YNI++  LCK
Sbjct: 498 LDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK 557

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
               + ++S  D +F+  KE  + P+  TYN LI+   +   +  +  L+ E+   G   
Sbjct: 558 ----RSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSS 613

Query: 506 NQTTYQIVREEM----MEKGFIPDIEG 528
           + +T +IV + +    ++K F+  + G
Sbjct: 614 DASTVKIVMDMLSSGELDKSFLNMLSG 640



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 194/362 (53%), Gaps = 8/362 (2%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S  + LR+ + + K +D   +++ M R R    +  FN +   L +  + +    + + M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKA-DAVFKDMVENGILPNEVTFNTLIDGFCK 271
           +  G++  + T NI+I+ +C++  +G  + A   +FK     G  PN VTFNTL++G C 
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFK----LGYEPNTVTFNTLLNGLCL 172

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +  A+++ + M        ++T N+++NGLC+  ++ EAV L   MMA+G +PN  T
Sbjct: 173 EGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFT 232

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              ++N  CK      A  L   +  + + P V+TY  +ID  CK+GR++DA +  + M 
Sbjct: 233 YGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEME 292

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +G+  +V TYN LI      G  +    ++ +++   +   +VT++ L+ +L K+GK  
Sbjct: 293 TKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLT 352

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A  L +EM     E   PN +TYN LI G C   +L++AN +++ ++ KG  P+  TY 
Sbjct: 353 EAKDLYNEMITRGIE---PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN 409

Query: 512 IV 513
           I+
Sbjct: 410 IL 411



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 175/315 (55%), Gaps = 3/315 (0%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + L+ +LVKEGK  + + +Y EM  R IE N  ++N ++ GLC   +L++A+
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +M+ M S G  P + TYNILI+G+CK   +    +   +F+ M   G++ + VT++TLI
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR---LFRKMSLRGMIADTVTYSTLI 447

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   +  A KVF+EM S G+  G++TY  L++GLC +G+L+EA+ + D+M    ++
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            ++   N +I+G C    V+ A  LF  +  +G+   + +YN ++   CK   + +A A+
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADAL 567

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M + G  PD  TYN LI    R  ++     ++ E+   G  +   T  I++  L  
Sbjct: 568 FRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627

Query: 447 DGKSKKAVSLLDEMF 461
               K  +++L   F
Sbjct: 628 GELDKSFLNMLSGPF 642



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 184/345 (53%), Gaps = 7/345 (2%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           +IIID L     K+ +       F      G+K++V + N L+ +    G+++D   + +
Sbjct: 269 TIIIDNL----CKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M  R+I  N+ +F+ +++ L K GKL +A D+  +M + G+ P  +TYN LI G C   
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND- 383

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
              ++ +A+ +   MV  G  P+  T+N LI+GFCK + +   M++F +M   G+ A  V
Sbjct: 384 --KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY++LI G C   KL  A  +  EM++ G+ P ++T   L++G C    +E+A  + D +
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
            +  +   +  YN +I   C   +++DA+++  S+  +GV  D+ +YN +++GL +  ++
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
                +  ++  +G      TYN L+ A  +      +V L++EM
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 155/301 (51%), Gaps = 6/301 (1%)

Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           + G+  + K DAV  F+ M+ +  LP  + FN L     + +     + + ++M   GIA
Sbjct: 63  RSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIA 122

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + T N +IN  C   KL  A +   ++   G +PN VT N L+NG C +  V +A  L
Sbjct: 123 YDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVEL 182

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            D +      P +IT NT+++  C + R+ +A  +   M+  G  P+  TY  ++  + +
Sbjct: 183 VDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCK 242

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            GN     +++ ++ +  ++  +VTY I++  LCKDG+   A+S   E   ME +    N
Sbjct: 243 SGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSE---METKGIKAN 299

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           + TYN LI  FC  G+ +D   LL +++ + + PN  T+  + + ++++G + + +  +Y
Sbjct: 300 VFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK-DLY 358

Query: 532 N 532
           N
Sbjct: 359 N 359



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 12/187 (6%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIF 102
           +++ FC S K       L++  ++   +V    +P I ++   L     NG+      I 
Sbjct: 446 LIQGFCQSRK-------LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             +  C   L  +  I ++++       K    +  F      G+K  + S N +L  L 
Sbjct: 499 DQMHKCKMEL--DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K     + + ++++MK    E +  ++N ++    +   +  +  ++E+MK  G S    
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616

Query: 223 TYNILID 229
           T  I++D
Sbjct: 617 TVKIVMD 623


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 202/381 (53%), Gaps = 22/381 (5%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GKF+    + K M R+    +  +++ V+  LC+A K+ KA  + ++MKS+GV 
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY ILID +CK   +G + +A + F +M   G  P+ VT+  L+  + K + +  A
Sbjct: 488 PDVYTYTILIDSFCK---VGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-------------- 324
             +F  M   G A   +TY++L++GLC  G+  +A  +  +M+ +               
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604

Query: 325 --LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             + PNVVT  ALI+G CK   V  A+ L D +S  G  P+ I Y+ LID +CK G++++
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G LP V TY  LI  + ++  ++    ++++++ +     +VTY  ++ 
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMID 724

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G+ +KA+ LL     MEK    PN+VTY  LI G  + GK++ +  L  +++ +G
Sbjct: 725 GLCRIGECQKALKLLS---MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN  TY+++       G +
Sbjct: 782 CAPNYVTYRVLINHCCAAGLL 802



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 199/380 (52%), Gaps = 22/380 (5%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  K     G      + ++++  L +  K E    +++EMK   +  ++ ++  +++
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK G + +A    ++M+S+G SP VVTY  L+  Y K   +    +A  +F  MV+ G
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVP---QASDIFHRMVDAG 555

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------------GSH--GIAAGVVTYN 298
             PN +T++ L+DG CK      A +V+ +M              G H   IA  VVTY 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +LI+GLC   K+ +A  L D M ++G +PN +  +ALI+GFCK   ++ A+ +F  +S+ 
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+V TY +LIDA  K+ R++ A  + + ML+    P+V TY  +I GL R G  +  
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++ +   G    +VTY  L+  L K GK   ++ L  +M     +   PN VTY VL
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI---TQGCAPNYVTYRVL 792

Query: 479 IKGFCQKGKLEDANGLLNEL 498
           I   C  G L++A+ LL+E+
Sbjct: 793 INHCCAAGLLDEAHSLLSEM 812



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 213/440 (48%), Gaps = 27/440 (6%)

Query: 89  FVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
           F K G      + F  + +  CS S+    +    L+ AY+K  +     + F R  D G
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSV----VTYTALLHAYLKTKQVPQASDIFHRMVDAG 555

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEM----------------KRRRIELNLDSFN 190
              + ++ + L+  L K G+ +    VY +M                    I  N+ ++ 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +++GLCKA K+  A ++++ M S G  P  + Y+ LIDG+CK   +GK+  A  VF  M
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK---VGKLDNAQEVFFRM 672

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
            + G LP   T+ +LID   KD  +  A+KV  +M        VVTY ++I+GLC  G+ 
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A+ L   M   G  PNVVT  +LI+G  K   V+ +  LF  +  QG +P+ +TY  L
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+  C  G +++A ++ + M        V  Y  ++ G S++        ++ EL ++GM
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK--FIASLGLLEELESHGM 850

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            +    Y +L+ +  K G+ +KA+ L  EM ++       +  TY  LI+  C   +LE 
Sbjct: 851 VSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEK 910

Query: 491 ANGLLNELLEKGLIPNQTTY 510
           A  L +E+  KG++P  + +
Sbjct: 911 AFELYSEITRKGVVPELSAF 930



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 189/406 (46%), Gaps = 20/406 (4%)

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           MK    F  F+     G+   V +   L+ +  K G  E     + EM+      ++ ++
Sbjct: 469 MKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTY 528

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-------------G 236
             +L+   K  ++ +ASDI   M   G +P  +TY+ L+DG CK G             G
Sbjct: 529 TALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIG 588

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                 +D  F+    + I PN VT+  LIDG CK   +  A ++ + M S+G     + 
Sbjct: 589 TSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHII 648

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y++LI+G C  GKLD A  +   M   G  P V T  +LI+   K + ++ A  +   + 
Sbjct: 649 YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E   +P+V+TY  +ID  C+ G  + A  + + M  RG  P+V TY  LI GL + G V+
Sbjct: 709 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVD 768

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT-Y 475
               +  +++  G     VTY +L+   C  G   +A SLL EM    K+  WP  V  Y
Sbjct: 769 MSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM----KQTYWPKYVQGY 824

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             +++GF +  K   + GLL EL   G++     Y ++ +   + G
Sbjct: 825 CSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAG 868



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 223/552 (40%), Gaps = 77/552 (13%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHS----------------LLLTGRLLHSL 73
           + V++ +  S   P L +R+F W+ +++  SH+                   T RLL  +
Sbjct: 104 DAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREI 163

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS-IIIDMLMLAYVKNMKP 132
               +    R    +  K  +  + +     L    D   R S    + L+       + 
Sbjct: 164 GEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQM 223

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            +GF   K   + G  +   +     +AL KEG++ D   +   ++R   +L+      +
Sbjct: 224 DMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQM 280

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GL +A   ++A   +  M+     P VVTY  L+ G+ KK  +G   +   +   M+ 
Sbjct: 281 ISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR---IISMMMN 337

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD----- 307
            G  PN   FN+L+  +C   +   A K+   M   G   G V YN  I  +C       
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPS 397

Query: 308 ------------------------------------GKLDEAVALRDEMMASGLKPNVVT 331
                                               GK D+A  +   MM  G  P+  T
Sbjct: 398 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST 457

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + +I   C+   VEKA +LF ++   G+ P V TY  LID++CK G +E A +  + M 
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEME 517

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  P V TY  L+    +   V    +I + +V+ G     +TY+ LV  LCK G+S+
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQ 577

Query: 452 KAVSLLDEM----------FKMEKEKK---WPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           KA  +  +M          F  E E      PN+VTY  LI G C+  K+ DA  LL+ +
Sbjct: 578 KACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637

Query: 499 LEKGLIPNQTTY 510
              G  PN   Y
Sbjct: 638 SSNGCEPNHIIY 649



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 8/298 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N II D L+  + K  K     E F R    G   +V +   L+ A+ K+ + +    V 
Sbjct: 645 NHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVL 704

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+ ++  +++GLC+ G+  KA  ++  M+  G +P VVTY  LIDG    
Sbjct: 705 SQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL--- 761

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+  +  +F  M+  G  PN VT+  LI+  C    +  A  +  EM        V
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYV 821

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y S++ G     K   ++ L +E+ + G+         LI+ F K   +EKA  L  +
Sbjct: 822 QGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKE 879

Query: 355 ISEQGLSPSVI---TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + E   S ++    TY +LI A C   ++E AF + + +  +GV+P++S + CLI GL
Sbjct: 880 MMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 29/329 (8%)

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N+++   C+ G   K  +     KD    G  P+  T+N L+        +    +V +E
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDF---GYRPSGATYNALVQVLATAGQMDMGFRVQKE 232

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G      T       LC +G+  +A+ + +       K + V    +I+G  +  L
Sbjct: 233 MSELGFCTDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASL 289

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            ++A      +      P+V+TY TL+  + K+ ++     + + M++ G  P+ S +N 
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+       +      ++N +   G   G V YNI +G++C  G+   +  LL    K+ 
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC-SGEELPSPDLLALAEKVY 408

Query: 465 KEKKWPNIVTYNVLIKGF----CQKGKLEDANGLLNELLEKGLIPNQTTYQ--------- 511
           +E    + V   V    F    C  GK + A  ++  ++ KG +P+ +TY          
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEA 468

Query: 512 -------IVREEMMEKGFIPDIEGHMYNI 533
                  ++ +EM   G IPD+  + Y I
Sbjct: 469 MKVEKAFLLFQEMKSVGVIPDV--YTYTI 495


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++       +C ++L  L+K   F+ V   Y+E+   
Sbjct: 71  GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  +   +   G+ P VV++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 191 FRLKTA---MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G C+K  +++AR L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++   +TY +++   CK G       LL E   M+++ + P++VT
Sbjct: 368 VLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKE---MQRDGQMPSVVT 418



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF  +   G+   VV++N+L+NG   
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ ++GL P+ +T
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL R+G+++  R++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A    +   +M +E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETA---FEHRKRMIQENIQLDDVGYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 361 RYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKG 395



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEEILECGYPASLYFFNILMHKFCKDGDI---RVAQSVFNAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   C++G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   ++   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A  +L EM  +  +   P+ +TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRYLDAEKVLREMLSVGLK---PDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 100/255 (39%), Gaps = 65/255 (25%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 15  SYCTMIHLLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++  G  A L  +NIL+   CKDG  + A S+ + +       KW   P
Sbjct: 116 YFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAI------TKWGLRP 169

Query: 471 NIVTYNV-----------------------------------LIKGFCQKGKLEDANGLL 495
           ++V++N                                    LI G C++ K++DAN L 
Sbjct: 170 SVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 496 NELLEKGLIPNQTTY 510
           +E+L+KGL+PN  T+
Sbjct: 230 DEMLDKGLVPNGVTF 244


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 219/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYAPSVVT 418



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 186/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K          
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  N+    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL PN
Sbjct: 181 YIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTD 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G  P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++ +E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 150/287 (52%), Gaps = 10/287 (3%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           G C+KG L+ A  L +E+  KGL P++ TY  +     +E  +E  F
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   ++  L +    + V     
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L N +   G+ P+  TY +                + +EM++ G +P
Sbjct: 180 GYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 240 NGVTFTTLIDGHCKN 254


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 212/423 (50%), Gaps = 46/423 (10%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF------- 189
           E   R   YG +   +S   +L+ L    ++EDVE ++ EM  +    N  +F       
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 190 ----------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
                                       N V+N +CK G+++ A   + +M S G SP  
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           ++Y  ++ G C+     +   A  + K+MV     PNEVTFNT I   C+   I  A  +
Sbjct: 387 ISYTTVLKGLCRAE---RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E+M  HG    +VTYN+L+NG CV G++D A+ L   M     KPN +T   L+ G C 
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCN 500

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + ++ A  L  ++ ++  +P+V+T+N L+  +C++G M++A  +   M++ G  P++ T
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L+ G++++ N E    +++ LV+NG+   +VTY+ ++G L ++ + ++A+    +MF
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI----KMF 616

Query: 462 KMEKE-KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + ++    P  V YN ++   C++   + A      ++  G +PN+ TY  + E +  +
Sbjct: 617 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 676

Query: 521 GFI 523
            F+
Sbjct: 677 DFL 679



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 202/390 (51%), Gaps = 9/390 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  DML+  + +        +  ++   +G  ++   CN ++  + K+G+ +D     
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M       +  S+  VL GLC+A +   A +++++M      P  VT+N  I   C+K
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G I    +A  + + M E+G   N VT+N L++GFC    + +A+++F  M         
Sbjct: 435 GLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNT 488

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY +L+ GLC   +LD A  L  EM+     PNVVT N L++ FC+K L+++A  L + 
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E G +P++ITYNTL+D   K+   E+A  + + ++  GV PD+ TY+ +I  LSRE  
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           VE    + + + + GMR   V YN ++ ALCK   +  A+   D    M      PN +T
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI---DFFAYMVSNGCMPNELT 665

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           Y  LI+G   +  L++   LL EL  +G++
Sbjct: 666 YITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 47/405 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           RA   G    V  C +L+R L + G+  D   V +  +R    +++ ++N ++ G C+ G
Sbjct: 99  RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYG 158

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +L+ A  ++    S+ V+P   TY  +I G C +G +G+   A ++  DM+  G  P+ V
Sbjct: 159 QLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGE---ALSLLDDMLHRGCQPSVV 212

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA----- 315
           T+  L++  CK      AM+V +EM + G    +VTYN +ING+C +G++D+A       
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 316 ------------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLV 345
                                         L  EMM     PN VT + L+  FC+  +V
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           E+A  + + +S  G + +    N +I+  CK+GR++DAF   N+M   G  PD  +Y  +
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 392

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + GL R    E  + ++ E+V        VT+N  +  LC+ G  ++A  L+++M +   
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E    NIVTYN L+ GFC +G+++ A  L   +  K   PN  TY
Sbjct: 453 EV---NIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 491



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 205/417 (49%), Gaps = 49/417 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV++   LL A+ K   F     V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + +  + S G  P  V+Y  ++ G C      +    + +F +M+E   +PNEVTF+ L
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLC---AAKRWEDVEELFAEMMEKNCMPNEVTFDML 322

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA---------- 315
           +  FC+   +  A++V E+M  HG AA     N +IN +C  G++D+A            
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 382

Query: 316 -------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                                    L  EM+     PN VT N  I   C+K L+E+A +
Sbjct: 383 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 442

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +SE G   +++TYN L++ +C +GR++ A  +  SM  +   P+  TY  L+ GL 
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLC 499

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
               ++    ++ E++       +VT+N+LV   C+ G   +A+ L+++M +       P
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME---HGCTP 556

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           N++TYN L+ G  +    E+A  LL+ L+  G+ P+  TY  +     RE+ +E+  
Sbjct: 557 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 13/259 (5%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A ++ +   S G A  V     LI  LC  G+  +A  +      SG   +V   N L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G+C+   ++ AR L   I+   ++P   TY  +I   C  GR+ +A ++ + ML RG  P
Sbjct: 153 GYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            V TY  L+  + +         +++E+   G    +VTYN+++  +C++G+   A   L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---- 513
           +   ++      P+ V+Y  ++KG C   + ED   L  E++EK  +PN+ T+ ++    
Sbjct: 270 N---RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 514 -REEMMEKGF--IPDIEGH 529
            R  M+E+    +  + GH
Sbjct: 327 CRGGMVERAIQVLEQMSGH 345



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 51/227 (22%)

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D  + +G +P V     LI   C+ GR  DA  +  +    G   DV  YN L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 407 AGLSREGNVEGVR--------------------------------NIMNELVNNGMRAGL 434
           AG  R G ++  R                                ++++++++ G +  +
Sbjct: 152 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY +L+ A+CK     +A+ +LDE   M  +   PNIVTYNV+I G C++G+++DA   
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDE---MRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 495 LNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
           LN L   G  P+  +Y  V +                EMMEK  +P+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 315


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 210/406 (51%), Gaps = 6/406 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  ++L+  Y +      G          GL  +V++   L+  L ++G  E +  + 
Sbjct: 293 NAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLL 352

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+ RR+  N+  +N V++ LCK    ++A  +++ M + G  P  +T++ LI G C++
Sbjct: 353 SEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQE 412

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G++ +A+ + ++     + PN  ++ +LI GFC    +  A  +  EM   G    V
Sbjct: 413 ---GRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDV 469

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+ +LI+GL V G++ EA+ +R++M A  L P+    N LI+G CKKK++  AR L ++
Sbjct: 470 VTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEE 529

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + EQ + P    Y TLID + +   +++A  +   M  +G+ PDV  YN +I G  + G 
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +      M+ +   G      TY  L+G   K G    A+SLL +M    K +  PN+V 
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM---KRRCQPNVVA 646

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           Y+ LI G+C+ G  + A  L   +  +GL PN  TY I+   + +K
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 239/522 (45%), Gaps = 49/522 (9%)

Query: 24  LKNTDPNTVILQLFNSDADPVLILRYFCWSTKELR-ASHSLLLTGRLLHSLVVAKKYPKI 82
           L +  P+  +     S ADP   L    WS    R  + +L     L HS          
Sbjct: 105 LPSPLPDARLADAVASLADPDHALALLSWSRSRSRHEAAALPAATPLAHS---------- 154

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTC-SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
            + L +  + G+F +V      +S   + +       +  L+  Y          E  +R
Sbjct: 155 -ALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQR 213

Query: 142 AGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           A + +G        N+LLR LV+  +++D   +Y EM       +  S   ++ GLC  G
Sbjct: 214 AREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEG 273

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK--------------------- 239
            + K   ++E     G  P  V YN+LIDGYC++G +G+                     
Sbjct: 274 LVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333

Query: 240 -----------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                      + K  ++  +M E  + PN   +N++ID  CK  + S A+ V ++M + 
Sbjct: 334 TLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAG 393

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G     +T+++LI+GLC +G++ EA  L  E     L PN+ +  +LI+GFC +  V  A
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L  ++ E+G +P V+T+  LI      G++ +A  +R  M  R +LPD + YN LI+G
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L ++  +   RN++ E++   +      Y  L+    ++    +A  + +    ME++  
Sbjct: 514 LCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE---FMEQKGI 570

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            P++V YN +IKG+CQ G + +A   ++ + + G IP++ TY
Sbjct: 571 HPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 188/413 (45%), Gaps = 52/413 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G     ++ + L+  L +EG+ ++ E + +E  R  +  NL S+  +++G C  G++  A
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453

Query: 206 SDIMEDMKSLGVSPKVVT-----------------------------------YNILIDG 230
           S+++ +M   G +P VVT                                   YN+LI G
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513

Query: 231 YCKKGGIGKMYKADA-VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            CKK    KM  A   + ++M+E  + P++  + TLIDGF ++E++  A K+FE M   G
Sbjct: 514 LCKK----KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   VV YN++I G C  G ++EAV     M   G  P+  T   LI G+ K+  +  A 
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L  D+ ++   P+V+ Y++LI+ YCK G  + A  +  SM  +G+ P+V TY  LI  L
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL 689

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS------------KKAVSLL 457
            ++  V         ++ N       T + LV  LC    S                +LL
Sbjct: 690 FKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALL 749

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           D    +  ++  P    YN +I   C    L +A  L N++  KG  P+  T+
Sbjct: 750 DIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATF 802



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           +++ G C +G + K  K   + +     G +PN V +N LIDG+C+  ++   + +  EM
Sbjct: 264 VMVRGLCLEGLVEKGLK---LIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM 320

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            + G+   VVTY +L++ L   G L++  +L  EM    L PNV   N++I+  CK +  
Sbjct: 321 EAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSA 380

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A V+   +   G  P  IT++TLI   C+EGR+++A  +        + P++S+Y  L
Sbjct: 381 SQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSL 440

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G    G V    N++ E++  G    +VT+  L+  L   G+  +A+ L+ E  KM  
Sbjct: 441 IHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL-LVRE--KMAA 497

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREE---- 516
            +  P+   YNVLI G C+K  L  A  L+ E+LE+ + P++  Y       +R E    
Sbjct: 498 RQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDE 557

Query: 517 -------MMEKGFIPDIEGHMYNISG 535
                  M +KG  PD+ G+   I G
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKG 583



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 177/361 (49%), Gaps = 26/361 (7%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT---YNILIDGYCKKGGIGKMYKADAVFK 248
           +L  L +AG+ +     + DM   G +  V T      L+  Y   G   K   A+   +
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAK--AAEMCQR 213

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
               +G LP     N L+    +      A K+++EM +    A   +   ++ GLC++G
Sbjct: 214 AREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEG 273

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            +++ + L +    +G  PN V  N LI+G+C++  V +  +L  ++  +GL P+V+TY 
Sbjct: 274 LVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+    ++G +E   ++ + M +R + P+V  YN +I  L +  +      ++ ++   
Sbjct: 334 TLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAG 393

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G     +T++ L+  LC++G+ ++A  LL E  + E     PN+ +Y  LI GFC +G++
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN---PNLSSYTSLIHGFCVRGEV 450

Query: 489 EDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPDIEGHMYN 532
             A+ LL E++E+G  P+  T+                 +VRE+M  +  +PD   ++YN
Sbjct: 451 IVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD--ANIYN 508

Query: 533 I 533
           +
Sbjct: 509 V 509



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+   ++    ++   +++ M+++ I  ++  +N ++ G C+ G +N+A + M  M+ +G
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P   TY  LI GY K+G I     A ++  DM++    PN V +++LI+G+CK  +  
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISG---ALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA  +F  M S G+   V+TY  LI  L    K+  A    + M+ +   PN  T ++L+
Sbjct: 662 AAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721

Query: 337 NGFC-------------------KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            G C                   K  L++  R L +D  +    P    YN +I + C  
Sbjct: 722 TGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCD----PRNSAYNAIIFSLCIH 777

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
             + +A  ++N M ++G  PD +T+  L+ G    G     R I+
Sbjct: 778 NMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 18/233 (7%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K+G       +  +M +RR + N+ +++ ++NG CK G  + A  +   M+S G
Sbjct: 615 LIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQG 674

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD---- 272
           + P V+TY ILI    KK    K+ +A   F+ M+ N   PN+ T ++L+ G C      
Sbjct: 675 LFPNVITYTILIGSLFKKD---KVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731

Query: 273 -----------ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
                          A + +F  + +         YN++I  LC+   L EA+ L+++M 
Sbjct: 732 ISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMA 791

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
             G KP+  T  +L+ GFC      + R +  +  ++        Y  L D Y
Sbjct: 792 NKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQY 844


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 244/483 (50%), Gaps = 23/483 (4%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---L 86
           N  +L+  N    P  I R++  +    R S +L     L  +++ ++  P I  F   L
Sbjct: 18  NLCLLEKGNRVTAP-FISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLL 76

Query: 87  HMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
               K+  +  V ++FH +  C     L   +I+I+ L     +  +  +      +   
Sbjct: 77  SNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCL----CRCSRFVIALSVVGKMMK 132

Query: 145 YGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +G +  V++ + L+    +  + F  V+ V K M+  R +L++  +N +++G CK G +N
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK-MEEMRCKLDVVIYNTIIDGFCKTGLVN 191

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M+  GV    VTYN L+ G C  G   +   A  + +DMV   I+PN +TF 
Sbjct: 192 NALVLFGRMERDGVRADTVTYNSLVTGLCCSG---RRSDAARLMRDMVMRDIVPNVITFT 248

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+ F ++     A K +EEM    I   V TYNS+I+GLC+ G++DEA  + D M+  
Sbjct: 249 ALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK 308

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+VVT N LINGFCK K V++   L  ++S++GL    +T+NT+I  Y + GR + A
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M   G  P++ TY+ L+ GL     VE    +   +  + M   + TYNI++  
Sbjct: 369 QEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHG 425

Query: 444 LCKDGKSKKAVSLLDEM-FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           +C  G  + A  L   + FK  +    P++VTY  +I GFC+K   + A+ L  ++ E G
Sbjct: 426 MCMIGNVEDAWDLFCSLSFKGLE----PDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481

Query: 503 LIP 505
           L+P
Sbjct: 482 LLP 484



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 195/365 (53%), Gaps = 9/365 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   + + N ++  L +  +F     V  +M +   E ++ + + ++NG C+  ++  A
Sbjct: 99  GIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGA 158

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  M+ +     VV YN +IDG+CK G +     A  +F  M  +G+  + VT+N+L
Sbjct: 159 VDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNN---ALVLFGRMERDGVRADTVTYNSL 215

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G C     S A ++  +M    I   V+T+ +LIN    +GK  EA    +EM+   +
Sbjct: 216 VTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCI 275

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T N++I+G C    V++A+ + D +  +G  P V+TYNTLI+ +CK  R+++   
Sbjct: 276 DPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTK 335

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG++ D  T+N +I G  + G  +  + I + +   G R  + TY+IL+  LC
Sbjct: 336 LVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLC 392

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            + + +KA+ L + M K E E    +I TYN++I G C  G +EDA  L   L  KGL P
Sbjct: 393 YNWRVEKALVLFESMQKSEME---LDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEP 449

Query: 506 NQTTY 510
           +  TY
Sbjct: 450 DVVTY 454



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 3/269 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  +F +M+++  LP+ V F+ L+    K +N    + +F  M   GI   + TYN +I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC   +   A+++  +MM  G +P+VVT ++LINGFC+   V  A  L   + E    
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             V+ YNT+ID +CK G + +A  +   M   GV  D  TYN L+ GL   G       +
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           M ++V   +   ++T+  L+ A  ++GK  +A    +EM +   +   P++ TYN +I G
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCID---PDVFTYNSMIHG 288

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C  G++++A  +L+ ++ KG  P+  TY
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTY 317



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 19/278 (6%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           N+  A+ +F  M        +V ++ L++ +      D  ++L   M   G+  ++ T N
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +IN  C+      A  +   + + G  P V+T ++LI+ +C+  R+  A  + + M + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
               DV  YN +I G  + G V     +   +  +G+RA  VTYN LV  LC  G+   A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--- 510
             L+ +M   +     PN++T+  LI  F ++GK  +A     E++ + + P+  TY   
Sbjct: 229 ARLMRDMVMRDIV---PNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285

Query: 511 -------------QIVREEMMEKGFIPDIEGHMYNISG 535
                        + + + M+ KG  PD+  +   I+G
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLING 323


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 230/455 (50%), Gaps = 24/455 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           ++L SLV AK +    S       NG  +   T F+ L  C   L  NS           
Sbjct: 75  KILSSLVKAKHHSTALSLHQQMELNGIVSDFFT-FNILINCFSQLGLNS----------- 122

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
                 L F  F +    G   + ++ N L++ L  +G        + ++  +   L+  
Sbjct: 123 ------LSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+  ++NGLCK G++  A  +++ +    V P  V YN++ID  CK   +   +    ++
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFD---LY 233

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV   I P++ T N+LI GFC    +  A+ +  +M    I   + T++ L++  C +
Sbjct: 234 SQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKE 293

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK+ EA  +    M   +  +VVT N+L++G+C  K + KA+ +FD ++ +G+  +V +Y
Sbjct: 294 GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSY 353

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            T+I+  CK   +++A  +   M  R ++P+V TYN LI GL + G +  V  +++E+ +
Sbjct: 354 TTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHD 413

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    ++TYN ++ ALCK+    KA++LL     ++ +   P++ TY VLIKG CQ GK
Sbjct: 414 RGQPPNIITYNSILDALCKNHHVDKAIALLTN---LKDQGIRPDMYTYTVLIKGLCQSGK 470

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           LEDA  +  +LL KG   +  TY ++ +    KG 
Sbjct: 471 LEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGL 505



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 211/382 (55%), Gaps = 6/382 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  KR     ++ + +  N ++  + K     D   +Y +M  +RI  +  + N ++ 
Sbjct: 194 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIY 253

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C  G+L +A  ++  M    ++P++ T++IL+D +CK+G   K+ +A  +    ++  
Sbjct: 254 GFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEG---KVKEAKMMLGVTMKKD 310

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I+ + VT+N+L+DG+C  + I+ A  +F+ M S G+ A V +Y ++INGLC    +DEAV
Sbjct: 311 IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAV 370

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM    + PNVVT N+LI+G  K   +     L D++ ++G  P++ITYN+++DA 
Sbjct: 371 NLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDAL 430

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++ A A+  ++ D+G+ PD+ TY  LI GL + G +E  + +  +L+  G    +
Sbjct: 431 CKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDV 490

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY +++   C  G    A++LL    KME     PN  TY ++I    +K + + A  L
Sbjct: 491 YTYTVMIQGFCVKGLFDAALALLS---KMEDNGCIPNAKTYEIVILSLFEKDENDMAEKL 547

Query: 495 LNELLEKGLIPNQTTYQIVREE 516
           L E++ +GL+  ++   +  +E
Sbjct: 548 LREMIARGLLDEKSYIYLASKE 569



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 152/293 (51%), Gaps = 6/293 (2%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           +P ++ +N ++    K         A ++ + M  NGI+ +  TFN LI+ F +    S 
Sbjct: 67  TPPIIQFNKILSSLVKAK---HHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           +  VF ++   G     +T+N+LI GLC+ G + +A+   D+++A G   + V+   LIN
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G CK   +  A  L   +  + + P+ + YN +ID  CK   + DAF + + M+ + + P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           D  T N LI G    G ++    ++++++   +   + T++ILV A CK+GK K+A  +L
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                  K+    ++VTYN L+ G+C   ++  A  + + +  +G+I N  +Y
Sbjct: 304 GVTM---KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSY 353



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 8/295 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           LLH +++    P++ +F   +  F K GK      +     T    +  + +  + LM  
Sbjct: 267 LLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV--TMKKDIILDVVTYNSLMDG 324

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y    + +   + F      G+ ++V S   ++  L K    ++   +++EM+ R+I  N
Sbjct: 325 YCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPN 384

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           + ++N +++GL K GK++    ++++M   G  P ++TYN ++D  CK   +    KA A
Sbjct: 385 VVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVD---KAIA 441

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +  ++ + GI P+  T+  LI G C+   +  A KVFE++   G    V TY  +I G C
Sbjct: 442 LLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFC 501

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           V G  D A+AL  +M  +G  PN  T   +I    +K   + A  L  ++  +GL
Sbjct: 502 VKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 211/402 (52%), Gaps = 6/402 (1%)

Query: 111 SLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           S CR N +I   L+  +++N +        K   + G+   +   N L+  L K  + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                 EM    ++ N  ++   ++G  +A +   A   +++M+  GV P  V    LI+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            YCKKG   K+ +A + ++ MV+ GIL +  T+  L++G  K++ +  A ++F EM   G
Sbjct: 566 EYCKKG---KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA  V +Y  LING    G + +A ++ DEM+  GL PNV+  N L+ GFC+   +EKA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L D++S +GL P+ +TY T+ID YCK G + +AF + + M  +G++PD   Y  L+ G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK-K 468
            R  +VE    I       G  +    +N L+  + K GK++    +L+ +     ++  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN VTYN++I   C++G LE A  L +++    L+P   TY
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 193/379 (50%), Gaps = 22/379 (5%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KEG  E  + ++  M    +     ++  ++ G C+   + +  +++ +MK   +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  ++ G C  G +   Y    + K+M+ +G  PN V + TLI  F ++     AM+V 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYN---IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   GIA  +  YNSLI GL    ++DEA +   EM+ +GLKPN  T  A I+G+ + 
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                A     ++ E G+ P+ +    LI+ YCK+G++ +A +   SM+D+G+L D  TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ GL +   V+    I  E+   G+   + +Y +L+    K G  +KA S+ DEM  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV- 654

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
             +E   PN++ YN+L+ GFC+ G++E A  LL+E+  KGL PN  TY  +         
Sbjct: 655 --EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 514 -------REEMMEKGFIPD 525
                   +EM  KG +PD
Sbjct: 713 LAEAFRLFDEMKLKGLVPD 731



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 228/495 (46%), Gaps = 61/495 (12%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           KE   +  +     L+  L  AK+  + RSFL   V+NG                  L  
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG------------------LKP 520

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+      +  Y++  +     +  K   + G+  + + C  L+    K+GK  +    Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M  + I  +  ++  ++NGL K  K++ A +I  +M+  G++P V +Y +LI+G+ K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK- 639

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G M KA ++F +MVE G+ PN + +N L+ GFC+   I  A ++ +EM   G+    
Sbjct: 640 --LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF-- 352
           VTY ++I+G C  G L EA  L DEM   GL P+      L++G C+   VE+A  +F  
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 353 ------------------------------------DDISEQGLSPSVITYNTLIDAYCK 376
                                               D   ++   P+ +TYN +ID  CK
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG +E A  + + M +  ++P V TY  L+ G  + G    +  + +E +  G+    + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP--NIVTYNVLIKGFCQKGKLEDANGL 494
           Y++++ A  K+G + KA+ L+D+MF           +I T   L+ GF + G++E A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 495 LNELLEKGLIPNQTT 509
           +  ++    IP+  T
Sbjct: 938 MENMVRLQYIPDSAT 952



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 186/389 (47%), Gaps = 35/389 (8%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K  + ED + +  EM    + L+  +++ +++GL K    + A  ++ +M S G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           ++ K   Y+  I   C     G M KA A+F  M+ +G++P    + +LI+G+C+++N+ 
Sbjct: 343 INIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++  EM    I     TY +++ G+C  G LD A  +  EM+ASG +PNVV    LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             F +      A  +  ++ EQG++P +  YN+LI    K  RM++A +    M++ G+ 
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS- 455
           P+  TY   I+G             + E+   G+    V    L+   CK GK  +A S 
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 456 ------------------LLDEMFK-------------MEKEKKWPNIVTYNVLIKGFCQ 484
                             L++ +FK             M  +   P++ +Y VLI GF +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            G ++ A+ + +E++E+GL PN   Y ++
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNML 668



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 143/610 (23%), Positives = 251/610 (41%), Gaps = 91/610 (14%)

Query: 11  DITELIRNHHW------SKLKNTDPNTVILQLFNSDA--DPVLILRYFCWSTKELRASHS 62
           +I  +++  +W      S L       V+L +  S    DP  +L +F W   +      
Sbjct: 37  EIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQK 96

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS---III 119
           L     L   L     + K  S +   ++      V+ ++ ++  CS      S   ++ 
Sbjct: 97  LDSFSFLALDLCNFGSFEKALSVVERMIERN--WPVAEVWSSIVRCSQEFVGKSDDGVLF 154

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +L   Y+           F  +    L   +  C  LL AL++  + +    VYK M  
Sbjct: 155 GILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE 214

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIM---------------------EDMKSLGVS 218
           R +  ++ +++ ++   C+AG +    D++                     E M   G+ 
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV 274

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P   TY++LIDG CK   I ++  A ++  +M   G+  +  T++ LIDG  K  N  AA
Sbjct: 275 PLKYTYDVLIDGLCK---IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
             +  EM SHGI      Y+  I  +  +G +++A AL D M+ASGL P      +LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 339 FCKKKLVEKARVLFDDISEQ-----------------------------------GLSPS 363
           +C++K V +   L  ++ ++                                   G  P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+ Y TLI  + +  R  DA  +   M ++G+ PD+  YN LI GLS+   ++  R+ + 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+V NG++    TY   +    +  +   A   + EM    +    PN V    LI  +C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
           +KGK+ +A      ++++G++ +  TY +                +  EM  KG  PD+ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 528 GHMYNISGTS 537
            +   I+G S
Sbjct: 629 SYGVLINGFS 638



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 6/370 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y +      G+E         +  S  +   +++ +   G  +    + KEM    
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+  +  ++    +  +   A  ++++MK  G++P +  YN LI G  K     +M 
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA---KRMD 504

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A +   +MVENG+ PN  T+   I G+ +    ++A K  +EM   G+    V    LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C  GK+ EA +    M+  G+  +  T   L+NG  K   V+ A  +F ++  +G++
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P V +Y  LI+ + K G M+ A ++ + M++ G+ P+V  YN L+ G  R G +E  + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++E+   G+    VTY  ++   CK G   +A  L DE   M+ +   P+   Y  L+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSFVYTTLVDG 741

Query: 482 FCQKGKLEDA 491
            C+   +E A
Sbjct: 742 CCRLNDVERA 751



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           +F R G    K + ++ N ++  L KEG  E  + ++ +M+   +   + ++  +LNG  
Sbjct: 796 SFDRFG----KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVF-KDMVENGI 255
           K G+  +   + ++  + G+ P  + Y+++I+ + K+G   K +   D +F K+ V++G 
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +  T   L+ GF K   +  A KV E M          T   LIN  C+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 211/402 (52%), Gaps = 6/402 (1%)

Query: 111 SLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           S CR N +I   L+  +++N +        K   + G+   +   N L+  L K  + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                 EM    ++ N  ++   ++G  +A +   A   +++M+  GV P  V    LI+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            YCKKG   K+ +A + ++ MV+ GIL +  T+  L++G  K++ +  A ++F EM   G
Sbjct: 566 EYCKKG---KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA  V +Y  LING    G + +A ++ DEM+  GL PNV+  N L+ GFC+   +EKA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L D++S +GL P+ +TY T+ID YCK G + +AF + + M  +G++PD   Y  L+ G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK-K 468
            R  +VE    I       G  +    +N L+  + K GK++    +L+ +     ++  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN VTYN++I   C++G LE A  L +++    L+P   TY
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 193/379 (50%), Gaps = 22/379 (5%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KEG  E  + ++  M    +     ++  ++ G C+   + +  +++ +MK   +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  ++ G C  G +   Y    + K+M+ +G  PN V + TLI  F ++     AM+V 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYN---IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   GIA  +  YNSLI GL    ++DEA +   EM+ +GLKPN  T  A I+G+ + 
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                A     ++ E G+ P+ +    LI+ YCK+G++ +A +   SM+D+G+L D  TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ GL +   V+    I  E+   G+   + +Y +L+    K G  +KA S+ DEM  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV- 654

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
             +E   PN++ YN+L+ GFC+ G++E A  LL+E+  KGL PN  TY  +         
Sbjct: 655 --EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 514 -------REEMMEKGFIPD 525
                   +EM  KG +PD
Sbjct: 713 LAEAFRLFDEMKLKGLVPD 731



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 228/495 (46%), Gaps = 61/495 (12%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           KE   +  +     L+  L  AK+  + RSFL   V+NG                  L  
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG------------------LKP 520

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+      +  Y++  +     +  K   + G+  + + C  L+    K+GK  +    Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M  + I  +  ++  ++NGL K  K++ A +I  +M+  G++P V +Y +LI+G+ K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK- 639

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G M KA ++F +MVE G+ PN + +N L+ GFC+   I  A ++ +EM   G+    
Sbjct: 640 --LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF-- 352
           VTY ++I+G C  G L EA  L DEM   GL P+      L++G C+   VE+A  +F  
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 353 ------------------------------------DDISEQGLSPSVITYNTLIDAYCK 376
                                               D   ++   P+ +TYN +ID  CK
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG +E A  + + M +  ++P V TY  L+ G  + G    +  + +E +  G+    + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP--NIVTYNVLIKGFCQKGKLEDANGL 494
           Y++++ A  K+G + KA+ L+D+MF           +I T   L+ GF + G++E A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 495 LNELLEKGLIPNQTT 509
           +  ++    IP+  T
Sbjct: 938 MENMVRLQYIPDSAT 952



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 186/389 (47%), Gaps = 35/389 (8%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K  + ED + +  EM    + L+  +++ +++GL K    + A  ++ +M S G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           ++ K   Y+  I   C     G M KA A+F  M+ +G++P    + +LI+G+C+++N+ 
Sbjct: 343 INIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++  EM    I     TY +++ G+C  G LD A  +  EM+ASG +PNVV    LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
             F +      A  +  ++ EQG++P +  YN+LI    K  RM++A +    M++ G+ 
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS- 455
           P+  TY   I+G             + E+   G+    V    L+   CK GK  +A S 
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 456 ------------------LLDEMFK-------------MEKEKKWPNIVTYNVLIKGFCQ 484
                             L++ +FK             M  +   P++ +Y VLI GF +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            G ++ A+ + +E++E+GL PN   Y ++
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNML 668



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/610 (23%), Positives = 251/610 (41%), Gaps = 91/610 (14%)

Query: 11  DITELIRNHHW------SKLKNTDPNTVILQLFNSDA--DPVLILRYFCWSTKELRASHS 62
           +I  +++  +W      S L       V+L +  S    DP  +L +F W   +      
Sbjct: 37  EIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQK 96

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS---III 119
           L     L   L     + K  S +   ++      V+ ++ ++  CS      S   ++ 
Sbjct: 97  LDSFSFLALDLCNFGSFEKALSVVERMIERN--WPVAEVWSSIVRCSQEFVGKSDDGVLF 154

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +L   Y+           F  +    L   +  C  LL AL++  + +    VYK M  
Sbjct: 155 GILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE 214

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIM---------------------EDMKSLGVS 218
           R +  ++ +++ ++   C+AG +    D++                     E M   G+ 
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV 274

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P   TY++LIDG CK   I ++  A ++  +M   G+  +  T++ LIDG  K  N  AA
Sbjct: 275 PLKYTYDVLIDGLCK---IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
             +  EM SHGI      Y+  I  +  +G +++A AL D M+ASGL P      +LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 339 FCKKKLVEKARVLFDDISEQ-----------------------------------GLSPS 363
           +C++K V +   L  ++ ++                                   G  P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+ Y TLI  + +  R  DA  +   M ++G+ PD+  YN LI GLS+   ++  R+ + 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+V NG++    TY   +    +  +   A   + EM    +    PN V    LI  +C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
           +KGK+ +A      ++++G++ +  TY +                +  EM  KG  PD+ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 528 GHMYNISGTS 537
            +   I+G S
Sbjct: 629 SYGVLINGFS 638



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 6/370 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y +      G+E         +  S  +   +++ +   G  +    + KEM    
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+  +  ++    +  +   A  ++++MK  G++P +  YN LI G  K     +M 
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA---KRMD 504

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A +   +MVENG+ PN  T+   I G+ +    ++A K  +EM   G+    V    LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C  GK+ EA +    M+  G+  +  T   L+NG  K   V+ A  +F ++  +G++
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P V +Y  LI+ + K G M+ A ++ + M++ G+ P+V  YN L+ G  R G +E  + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++E+   G+    VTY  ++   CK G   +A  L DE   M+ +   P+   Y  L+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSFVYTTLVDG 741

Query: 482 FCQKGKLEDA 491
            C+   +E A
Sbjct: 742 CCRLNDVERA 751



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           +F R G    K + ++ N ++  L KEG  E  + ++ +M+   +   + ++  +LNG  
Sbjct: 796 SFDRFG----KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVF-KDMVENGI 255
           K G+  +   + ++  + G+ P  + Y+++I+ + K+G   K +   D +F K+ V++G 
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +  T   L+ GF K   +  A KV E M          T   LIN  C+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 214/431 (49%), Gaps = 31/431 (7%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
            M  Y+      +G E F+RA +      V+ C  ++R   + GKF++   +  EM+   
Sbjct: 140 FMRFYIVCATSFIGNENFERAHE------VMDC--MVRVFAEIGKFQEAVNMVIEMENHG 191

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           + L + + N V     + G +  A ++ ++M+  GV P  V+Y ++   YC+   +G++ 
Sbjct: 192 LVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCR---MGRIS 248

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
             D   KDMV  G + +  T   +I  FC+    S     F++    G+   ++ + SLI
Sbjct: 249 DTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLI 308

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGL 360
           NGLC  G + +A  + +EM+  G KPNV T  ALI+G CKK   EKA R+    +     
Sbjct: 309 NGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDY 368

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P+V TY ++I  YCKE ++  A  + + M ++G++P+  TY CLI G S+ GN E    
Sbjct: 369 KPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYE 428

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +M+ +   G  A + TYN  + +LCK G+  +A  LL + F++  +    + VTY +LI 
Sbjct: 429 LMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ---ADTVTYTILIS 485

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEK-----------GFIP 524
             C++    +A    +++ + G+ P+  TY  +     R+  ME+           G +P
Sbjct: 486 ELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVP 545

Query: 525 DIEGHMYNISG 535
             E +   I G
Sbjct: 546 TKETYTSMICG 556



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 191/400 (47%), Gaps = 9/400 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +C +S+   ++ +AY +  +        K     G      +C  ++    ++G    V 
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           + + +     ++ NL +F  ++NGLCK G + +A +++E+M   G  P V T+  LIDG 
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 232 CKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           CKKG   K ++   +F  +V  +   PN  T+ ++I G+CK++ ++ A  +   M   G+
Sbjct: 347 CKKGWTEKAFR---LFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGL 403

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                TY  LI+G    G  ++A  L D M   G   N+ T NA I+  CKK    +A  
Sbjct: 404 VPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACK 463

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L       GL    +TY  LI   C+     +A    + M   GV PD+ TYN LIA  S
Sbjct: 464 LLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFS 523

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKW 469
           R+  +E    +  E V  G+     TY  ++   C+D    + VSL  + F +M      
Sbjct: 524 RQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRD----RNVSLALKFFNRMSDHGCT 579

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           P+ +TY  LI G C++ KL++A  L   +++KGL P + T
Sbjct: 580 PDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT 619



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 195/386 (50%), Gaps = 9/386 (2%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F  F +  + GLK ++++   L+  L K G  +    + +EM ++  + N+ +   +++G
Sbjct: 286 FWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDG 345

Query: 196 LCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LCK G   KA  + ++ ++S    P V TY  +I GYCK+    K+ +A+ +   M E G
Sbjct: 346 LCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKED---KLNRAEMLLSRMKEQG 402

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           ++PN  T+  LIDG  K  N   A ++ + MG  G +A + TYN+ I+ LC  G+  EA 
Sbjct: 403 LVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEAC 462

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +    GL+ + VT   LI+  C++    +A V F  + + G+ P + TYNTLI A+
Sbjct: 463 KLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAF 522

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            ++ RME++  +    +  G++P   TY  +I G  R+ NV       N + ++G     
Sbjct: 523 SRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDS 582

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TY  L+  LCK+ K  +A  L + M     +   P  VT   L   +C++     A  +
Sbjct: 583 LTYGALISGLCKESKLDEACQLYEAMV---DKGLSPCEVTRLTLAYEYCKQDDSATAMVI 639

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEK 520
           L  L +K  I  +T   ++R+   E+
Sbjct: 640 LERLDKKLWI--RTVNTLIRKLCSER 663



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 36/322 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + GL  +  +   L+    K G FE    +   M +     N+ ++N  ++ LCK G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG 456

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-------IGKMYKA---------- 243
           +  +A  +++    LG+    VTY ILI   C++           KM+KA          
Sbjct: 457 RFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYN 516

Query: 244 ---------------DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                          + +F + V  G++P + T+ ++I G+C+D N+S A+K F  M  H
Sbjct: 517 TLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDH 576

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G     +TY +LI+GLC + KLDEA  L + M+  GL P  VT   L   +CK+     A
Sbjct: 577 GCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATA 636

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
            V+ + + ++     + T NTLI   C E ++  A    + +LD+    D  T       
Sbjct: 637 MVILERLDKKLW---IRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTA 693

Query: 409 LSREGNVEGVRNIMNELVNNGM 430
              E N   + + ++E ++ G+
Sbjct: 694 -CYESNKYALVSDLSERISKGI 714


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 232/483 (48%), Gaps = 38/483 (7%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           +H +   G+    + +F  +      L  N +  +  + +  K+ +     E F      
Sbjct: 342 IHGYATLGRLKEAAKMFREMK--KRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK 399

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  + S   LL     EG F D+  ++  MK   I  N   F  +++   K G ++ A
Sbjct: 400 GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDA 459

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I  +M+  GVSP VVTY+ +I  + +   +G++  A   F  MV  GI PN   ++++
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISTFSR---MGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           I GFC    +  A ++  EM + GI    +V ++S+IN LC DG++ +A  + D     G
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +P V+T N+LI+G+C    ++KA  + D +   G+ P ++TYNTL+D Y K GR+ D  
Sbjct: 577 ERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGL 636

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +GV P+  TY  ++AGL R G     R   +E++ +G    +  Y I++G L
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696

Query: 445 CKDGKSKKAV-------------------SLLDEMFKMEKEKK-------------WPNI 472
           C++  + +A+                   ++++ M+K++++++              PN 
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            TY V+I    + G +EDAN + + + + G++P       +   ++EKG I     ++  
Sbjct: 757 STYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSK 816

Query: 533 ISG 535
           + G
Sbjct: 817 VDG 819



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 196/410 (47%), Gaps = 10/410 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMK 178
           ++LM    +  +P LG   F      GLK   ++ N LL+ L    + E+ V  +   M 
Sbjct: 161 NILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMS 220

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGG 236
                 N  S++ VL  LC      +A D+++ M   G   SP VV Y+ +I G+  +G 
Sbjct: 221 ELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGE 280

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
            GK   A ++F +M   G+ P+ VT+N +ID  CK   +  A  V  +M + G     VT
Sbjct: 281 TGK---ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y+ +I+G    G+L EA  +  EM   GL PN+VT N+ +   CK    ++A   FD ++
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMT 397

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
            +G  P + +Y TL+  Y  EG   D   + NSM   G+  +   +  LI   ++ G V+
Sbjct: 398 AKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVD 457

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               I  E+   G+   +VTY+ ++    + G+   A+   ++M         PN   Y+
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV---ARGIQPNTAVYS 514

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKGFIPD 525
            +I+GFC  G L  A  L++E++ KG+  P+   +  V   + + G + D
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 173/380 (45%), Gaps = 34/380 (8%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS--------- 218
           +D  +++ E+ R+   +   S N  L  L +A     +S  + D  +L ++         
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLAALARA---TSSSACITDGPALALALFNRVCREE 147

Query: 219 -------PKVVTYNILIDGYCKKGGIGKMYKAD---AVFKDMVENGILPNEVTFNTLIDG 268
                  P   TYNIL+D  C+        + D   A+F  ++  G+  +++T NTL+  
Sbjct: 148 AGTQVAVPTFCTYNILMDCCCRA------RRPDLGLALFGCILRTGLKMDQITANTLLKC 201

Query: 269 FCKDENISAAMKV-FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--L 325
            C       A+ V    M   G     V+Y+ ++  LC +     A+ L   M   G   
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGAC 261

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VV  + +I+GF  +    KA  LF +++ QG+ P V+TYN +IDA CK   M+ A  
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M   G  PD  TY+C+I G +  G ++    +  E+   G+   +VT N  + +LC
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G+SK+A    D    M  +   P+I +Y  L+ G+  +G   D  GL N +   G+  
Sbjct: 382 KHGRSKEAAEFFDS---MTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA 438

Query: 506 NQTTYQIVREEMMEKGFIPD 525
           N   + I+     ++G + D
Sbjct: 439 NCHVFTILIHAYAKRGMVDD 458



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++ +L K+G+  D   ++           + +FN +++G C  GK++KA  I++ M+ 
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +GV P +VTYN L+DGY K G I        +F++M   G+ PN VT+  ++ G  +   
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRIND---GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
             AA K F EM   G    V  Y  ++ GLC +   DEA+ L  ++    +K ++   N 
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +IN   K +  E+A+ LF  IS  GL P+  TY  +I    K+G +EDA  M +SM   G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSG 786

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           ++P     N +I  L  +G +    N ++++    +     T ++++    + GK ++ +
Sbjct: 787 IVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDI 846

Query: 455 SLLDEMFK 462
            LL   ++
Sbjct: 847 KLLPAKYQ 854


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 236/523 (45%), Gaps = 39/523 (7%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAK-KYPKIRSFLHMFVKNGK 94
           LF    D  L L +F WS   + + H++     ++H LV     +  +   LH+   N  
Sbjct: 70  LFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSG 129

Query: 95  FTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
                 IF  +            +  ML+  YVK     +  +   +     +   +  C
Sbjct: 130 EEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVC 189

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL+AL++  +        KEMK + + LN    +  ++G C  G ++    ++ +MK 
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL------------------ 256
           LG+ P VV Y I+ID  CK   +  + +A ++   M + G+                   
Sbjct: 250 LGIKPDVVAYTIVIDSLCK---MSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGK 306

Query: 257 --------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
                         PN   FN+ I   C D N+  A KVF++M   G+     +Y +++ 
Sbjct: 307 SEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C    +  A+    +M+  G++P+V T   LI+  CK   +E A  LF  +  +GL P
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP 426

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V++YNTL++ Y K+G ++ AF + + M   GV PD+ TYN LI GL + G V   ++I+
Sbjct: 427 DVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDIL 486

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +EL   G    +VT+  ++G     G  ++A  L    F M +    P++VT + L+ G+
Sbjct: 487 DELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLF---FYMSEHHLEPDVVTCSALLNGY 543

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           C+   + +AN L +++L+ GL  +   Y  +       G I D
Sbjct: 544 CRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDD 586



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 162/297 (54%), Gaps = 3/297 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           + L  ++   N  +  L  +G       V+++M    +  +  S+  ++ G CK   ++ 
Sbjct: 317 FNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISN 376

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A   +  M   G+ P V TY +LID  CK G    M  A+ +F+ M+  G++P+ V++NT
Sbjct: 377 ALKYLGKMLKRGIRPSVATYTLLIDSCCKPG---NMEMAEYLFQRMITEGLVPDVVSYNT 433

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L++G+ K  ++  A ++   M S G++  +VTYN LI+GL   G ++EA  + DE+   G
Sbjct: 434 LMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRG 493

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT   +I GF  K   E+A +LF  +SE  L P V+T + L++ YC+   M +A 
Sbjct: 494 FSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEAN 553

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            + + MLD G+  DV  YN LI G    GN++   ++++ ++ +G+    +T++ LV
Sbjct: 554 VLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 148/276 (53%), Gaps = 3/276 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           + F+   + GL     S   ++    K     +      +M +R I  ++ ++  +++  
Sbjct: 344 KVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSC 403

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G +  A  + + M + G+ P VV+YN L++GY KKG + K ++   +   M   G+ 
Sbjct: 404 CKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE---LLSMMRSAGVS 460

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ VT+N LI G  K   ++ A  + +E+   G +  VVT+ ++I G    G  +EA  L
Sbjct: 461 PDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLL 520

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M    L+P+VVT +AL+NG+C+ + + +A VLF  + + GL   VI YN+LI  +C 
Sbjct: 521 FFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCS 580

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            G ++DA  + + M++ G++P+  T++ L+ G  ++
Sbjct: 581 LGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKK 616



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 131/284 (46%), Gaps = 22/284 (7%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E  +  L++ + K+     A+K+  +M    I   +   NSL+  L    +L+ A     
Sbjct: 151 ETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM + GL  N    +  I+G+C +  ++    L  ++   G+ P V+ Y  +ID+ CK  
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +++A ++   M   GV  D  + + ++ G  + G  E   +++ E+ N  +   +  +N
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVL-EVFN--LSPNIFVFN 327

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             +  LC DG   KA  +  +M +M      P+  +Y  ++ G+C+   + +A   L ++
Sbjct: 328 SFISKLCTDGNMLKAAKVFQDMCEM---GLIPDCFSYTTMMAGYCKVKDISNALKYLGKM 384

Query: 499 LEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           L++G+ P+  TY +                + + M+ +G +PD+
Sbjct: 385 LKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDV 428


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  S++S N ++    K+G  +D   V   +    ++ N  ++  ++ G  K G    A
Sbjct: 461 GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M + G+ P   T+N +I+G CK   +G++ +A       ++   +P  +T+N +
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCK---VGRVSEARDKLNTFIKQSFIPTSMTYNCI 577

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+ K+  I +A  V+ EM    I+  V+TY SLING C   K+D A+ + D+M   GL
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGL 637

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + ++     LI GFCK + +E A   F  + E GL+P+ I YN +I AY     ME A  
Sbjct: 638 ELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALN 697

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M++  +  D+  Y  LI GL +EG +    ++ +E++  G+   +  YN+L+  LC
Sbjct: 698 LHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLC 757

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+ + A  +L E   M+     P ++ YN LI G  ++G L++A  L +E+L+KGL+P
Sbjct: 758 NHGQLENAGKILKE---MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVP 814

Query: 506 NQTTYQIV 513
           + TTY I+
Sbjct: 815 DDTTYDIL 822



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 200/393 (50%), Gaps = 22/393 (5%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           +SV++ N +L  L + GK  +   ++ +M  + I  +L S+N ++ G CK G ++ A ++
Sbjct: 429 ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEV 488

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           M  +   G+ P  +TY IL++G  KKG     +    +F  MV  GI+P + TFN++I+G
Sbjct: 489 MNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN---MFDQMVAAGIVPTDYTFNSIING 545

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK   +S A                +TYN +I+G   +G +D A ++  EM  S + PN
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V+T  +LINGFCK   ++ A  + DD+  +GL   +  Y TLI  +CK   ME+A    +
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            +L+ G+ P+   YN +I+      N+E   N+  E++NN +   L  Y  L+  L K+G
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEG 725

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K   A+ L  EM         P+I  YNVLI G C  G+LE+A  +L E+    + P   
Sbjct: 726 KLSFALDLYSEMLC---RGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVL 782

Query: 509 TYQIV----------------REEMMEKGFIPD 525
            Y  +                 +EM++KG +PD
Sbjct: 783 LYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPD 815



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 204/378 (53%), Gaps = 9/378 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E + R    GL+ +V   N LL+   K+   E+   +        I  ++ ++N VL  L
Sbjct: 383 ELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWL 441

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ GK+N+A ++ + M   G++P +V+YN +I G+CKKG    M  A  V   ++E+G+ 
Sbjct: 442 CELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGC---MDDAHEVMNGIIESGLK 498

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN +T+  L++G  K  +   A  +F++M + GI     T+NS+INGLC  G++ EA   
Sbjct: 499 PNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDK 558

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +  +     P  +T N +I+G+ K+  ++ A  ++ ++    +SP+VITY +LI+ +CK
Sbjct: 559 LNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCK 618

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             +M+ A  M + M  +G+  D++ Y  LIAG  +  ++E      ++L+  G+    + 
Sbjct: 619 SNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIV 678

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLL 495
           YNI++ A       + A++L  EM       K P ++  Y  LI G  ++GKL  A  L 
Sbjct: 679 YNIMISAYRNLNNMEAALNLHKEMIN----NKIPCDLKIYTSLIDGLLKEGKLSFALDLY 734

Query: 496 NELLEKGLIPNQTTYQIV 513
           +E+L +G++P+   Y ++
Sbjct: 735 SEMLCRGIVPDIFMYNVL 752



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 220/439 (50%), Gaps = 9/439 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           +V+  K T     F A+    D +      +++L+ A ++          F    +  + 
Sbjct: 162 YVRANKITEAVECFRAM--LEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIY 219

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
               +   L+RA +K GKF + E  + +   R ++L+  S++ V+  +C+   L+ AS +
Sbjct: 220 GDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKL 279

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +E  + LG  P   TY  +I    + G  G+  +      +MV++ +  N     +LI G
Sbjct: 280 VEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLK---DEMVDSRVPVNVAVATSLIKG 336

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           +C   ++++A+++F+E+   G+   V  ++ LI      G +++A  L   M   GL+P 
Sbjct: 337 YCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPT 396

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V   N L+ GF K+ L+E A +L D   E G++ SV+TYN ++   C+ G++ +A  + +
Sbjct: 397 VFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWD 455

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+ +G+ P + +YN +I G  ++G ++    +MN ++ +G++   +TY IL+    K G
Sbjct: 456 KMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKG 515

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             + A ++ D+M         P   T+N +I G C+ G++ +A   LN  +++  IP   
Sbjct: 516 DCEHAFNMFDQMV---AAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572

Query: 509 TYQIVREEMMEKGFIPDIE 527
           TY  + +  +++G I   E
Sbjct: 573 TYNCIIDGYVKEGAIDSAE 591



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 189/370 (51%), Gaps = 7/370 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  +  +V     L++     G       ++ E+    +  N+  F+ ++    K G + 
Sbjct: 320 DSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVE 379

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA+++   MK +G+ P V   N L+ G+ K+  +   Y    +    VENGI  + VT+N
Sbjct: 380 KANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY---LLLDGAVENGI-ASVVTYN 435

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++   C+   ++ A  ++++M   GI   +V+YN +I G C  G +D+A  + + ++ S
Sbjct: 436 IVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIES 495

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GLKPN +T   L+ G  KK   E A  +FD +   G+ P+  T+N++I+  CK GR+ +A
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEA 555

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
               N+ + +  +P   TYNC+I G  +EG ++   ++  E+  + +   ++TY  L+  
Sbjct: 556 RDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLING 615

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK  K   A+ + D+M +   E    +I  Y  LI GFC+   +E+A    ++LLE GL
Sbjct: 616 FCKSNKMDLALKMHDDMKRKGLEL---DITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 504 IPNQTTYQIV 513
            PN   Y I+
Sbjct: 673 TPNTIVYNIM 682



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 150/257 (58%), Gaps = 3/257 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           ++ N ++   VKEG  +  E VY+EM R  I  N+ ++  ++NG CK+ K++ A  + +D
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  G+   +  Y  LI G+CK   +  M  A   F  ++E G+ PN + +N +I  +  
Sbjct: 632 MKRKGLELDITVYATLIAGFCK---MQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+ AA+ + +EM ++ I   +  Y SLI+GL  +GKL  A+ L  EM+  G+ P++  
Sbjct: 689 LNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFM 748

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LING C    +E A  +  ++    ++P+V+ YNTLI  + KEG +++AF + + ML
Sbjct: 749 YNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808

Query: 392 DRGVLPDVSTYNCLIAG 408
           D+G++PD +TY+ L+ G
Sbjct: 809 DKGLVPDDTTYDILVNG 825



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 238/511 (46%), Gaps = 60/511 (11%)

Query: 32  VILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVV-----AKKYPKIRSFL 86
           V+  L    ADP   LR+F    K++        T  +L  L+       + +   +  L
Sbjct: 64  VLDTLLLHKADPRSALRFF----KQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLL 119

Query: 87  HMFVKNGKFTSVSTIFHALSTCSDSL---CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +V      +   +   L  C++       +S + + L+++YV+  K     E F+   
Sbjct: 120 NKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAML 179

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+   V   N LL A+++    ED   ++ EM  RRI            G C      
Sbjct: 180 EDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIY-----------GDC------ 222

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
                              T  +L+   C KGG  K  +A+  F      G+  +  +++
Sbjct: 223 ------------------YTLQVLMRA-CLKGG--KFVEAERYFGQAAGRGLKLDAASYS 261

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-GKLDEAVALRDEMMA 322
            +I   C+  ++  A K+ E     G      TY ++I G CV  G   EA+ L+DEM+ 
Sbjct: 262 IVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVI-GACVRLGNFGEALRLKDEMVD 320

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           S +  NV  + +LI G+C +  V  A  LFD++ E G++P+V  ++ LI+   K G +E 
Sbjct: 321 SRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEK 380

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G+ P V   N L+ G  ++  +E    +++  V NG+ A +VTYNI++ 
Sbjct: 381 ANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLL 439

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ GK  +A +L D   KM  +   P++V+YN +I G C+KG ++DA+ ++N ++E G
Sbjct: 440 WLCELGKVNEACNLWD---KMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESG 496

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           L PN  TY I+ E   +KG   D E H +N+
Sbjct: 497 LKPNAITYTILMEGSFKKG---DCE-HAFNM 523



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 42/85 (49%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   +   N L+  L   G+ E+   + KEM    I   +  +N ++ G  K G L +A
Sbjct: 741 GIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEA 800

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDG 230
             + ++M   G+ P   TY+IL++G
Sbjct: 801 FRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 212/423 (50%), Gaps = 46/423 (10%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF------- 189
           E   R   YG +   +S   +L+ L    ++EDVE ++ EM  +    N  +F       
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 190 ----------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
                                       N V+N +CK G+++ A   + +M S G SP  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           ++Y  ++ G C+     +   A  + K+MV     PNEVTFNT I   C+   I  A  +
Sbjct: 356 ISYTTVLKGLCRAE---RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E+M  HG    +VTYN+L+NG CV G++D A+ L   M     KPN +T   L+ G C 
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCN 469

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + ++ A  L  ++ ++  +P+V+T+N L+  +C++G M++A  +   M++ G  P++ T
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L+ G++++ N E    +++ LV+NG+   +VTY+ ++G L ++ + ++A+    +MF
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI----KMF 585

Query: 462 KMEKE-KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + ++    P  V YN ++   C++   + A      ++  G +PN+ TY  + E +  +
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645

Query: 521 GFI 523
            F+
Sbjct: 646 DFL 648



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 202/390 (51%), Gaps = 9/390 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  DML+  + +        +  ++   +G  ++   CN ++  + K+G+ +D     
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M       +  S+  VL GLC+A +   A +++++M      P  VT+N  I   C+K
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G I    +A  + + M E+G   N VT+N L++GFC    + +A+++F  M         
Sbjct: 404 GLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNT 457

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY +L+ GLC   +LD A  L  EM+     PNVVT N L++ FC+K L+++A  L + 
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E G +P++ITYNTL+D   K+   E+A  + + ++  GV PD+ TY+ +I  LSRE  
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           VE    + + + + GMR   V YN ++ ALCK   +  A+   D    M      PN +T
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI---DFFAYMVSNGCMPNELT 634

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           Y  LI+G   +  L++   LL EL  +G++
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 47/405 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           RA   G    V  C +L+R L + G+  D   V +  +R    +++ ++N ++ G C+ G
Sbjct: 68  RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYG 127

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +L+ A  ++    S+ V+P   TY  +I G C +G +G+   A ++  DM+  G  P+ V
Sbjct: 128 QLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGE---ALSLLDDMLHRGCQPSVV 181

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA----- 315
           T+  L++  CK      AM+V +EM + G    +VTYN +ING+C +G++D+A       
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241

Query: 316 ------------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLV 345
                                         L  EMM     PN VT + L+  FC+  +V
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           E+A  + + +S  G + +    N +I+  CK+GR++DAF   N+M   G  PD  +Y  +
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 361

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + GL R    E  + ++ E+V        VT+N  +  LC+ G  ++A  L+++M +   
Sbjct: 362 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E    NIVTYN L+ GFC +G+++ A  L   +  K   PN  TY
Sbjct: 422 EV---NIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 205/417 (49%), Gaps = 49/417 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV++   LL A+ K   F     V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + +  + S G  P  V+Y  ++ G C      +    + +F +M+E   +PNEVTF+ L
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLC---AAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA---------- 315
           +  FC+   +  A++V E+M  HG AA     N +IN +C  G++D+A            
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 316 -------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                                    L  EM+     PN VT N  I   C+K L+E+A +
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +SE G   +++TYN L++ +C +GR++ A  +  SM  +   P+  TY  L+ GL 
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLC 468

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
               ++    ++ E++       +VT+N+LV   C+ G   +A+ L+++M +       P
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME---HGCTP 525

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           N++TYN L+ G  +    E+A  LL+ L+  G+ P+  TY  +     RE+ +E+  
Sbjct: 526 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 13/264 (4%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           ++++ A ++ +   S G A  V     LI  LC  G+  +A  +      SG   +V   
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+ G+C+   ++ AR L   I+   ++P   TY  +I   C  GR+ +A ++ + ML 
Sbjct: 117 NTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  P V TY  L+  + +         +++E+   G    +VTYN+++  +C++G+   
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A   L+   ++      P+ V+Y  ++KG C   + ED   L  E++EK  +PN+ T+ +
Sbjct: 234 AREFLN---RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 513 V-----REEMMEKGF--IPDIEGH 529
           +     R  M+E+    +  + GH
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGH 314



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 22/244 (9%)

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+ +  L     L EA  L D   + G  P+V     LI   C++     A  +      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G +  V  YNTL+  YC+ G+++ A  +  SM    V PD  TY  +I GL   G V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             ++++++++ G +  +VTY +L+ A+CK     +A+ +LDEM     +   PNIVTYNV
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM---RAKGCTPNIVTYNV 220

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKG 521
           +I G C++G+++DA   LN L   G  P+  +Y  V +                EMMEK 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 522 FIPD 525
            +P+
Sbjct: 281 CMPN 284


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 214/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   ++  + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+    +       +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N LI+GY + G + K 
Sbjct: 131 GYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T   LI+G CK+  +  A ++F EM   G+    VT+ +L
Sbjct: 191 FRLKTA---MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C  G++D A+ +  +M+  G  P+++T N LI G C+K  +++AR L  ++S +GL
Sbjct: 248 IDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF +R  M++  +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G  K A  LL E   M+++   P +VT
Sbjct: 368 MLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKE---MQRDGHVPCVVT 418



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+LING   
Sbjct: 124 YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LD+   L+  M ASG+ P+V T+  LING CK+  +++A  LF+++ ++GL P+ +T
Sbjct: 184 LGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML +G  PD+ TYN LI GL R+G+++  R+++ E+ 
Sbjct: 244 FTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A  L   M    +E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMI---EESIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++     ++G
Sbjct: 361 RAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQG 395



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 188/358 (52%), Gaps = 6/358 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    ++  ++ +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTLI+
Sbjct: 123 FYKEILECGYPTSLYFFNILMHRFCKEGEI---RLAQSVFDAITKCGLRPSVVSFNTLIN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V T   LINGLC + K+DEA  L +EM+  GL P
Sbjct: 180 GYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  QG SP +ITYNTLI   C++G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +G+ PD  TY  LI G  +EG++E    +   ++   +R   V Y  L+  LC++
Sbjct: 300 VEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           G++  A  +L EM  +  +   P   TY ++I GFC++G ++ A+ LL E+   G +P
Sbjct: 360 GRAVDAEKMLREMLSVGLK---PENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 133/246 (54%), Gaps = 3/246 (1%)

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           ++E+   G    +  +N L++  C +G++  A ++ D +   GL+P+VV+ N LING+ +
Sbjct: 124 YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIR 183

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              ++K   L   +   G+ P V T   LI+  CKE +M++A  + N MLD+G++P+  T
Sbjct: 184 LGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVT 243

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  LI G  + G V+    I  +++  G    L+TYN L+  LC+ G  K+A  L+ EM 
Sbjct: 244 FTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEM- 302

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            M+  K  P+ +TY  LI G C++G LE A  L   ++E+ +  +   Y  +   + ++G
Sbjct: 303 SMKGLK--PDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEG 360

Query: 522 FIPDIE 527
              D E
Sbjct: 361 RAVDAE 366


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 205/389 (52%), Gaps = 5/389 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F++    G   +V++   ++  L+K G+ ED    +++M          ++  V++GL
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CKA  L  A  + E M   G  P  +TY  LIDG+ K     KM +A  +   M+  G  
Sbjct: 444 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS---KMDEARKLLDVMLTKGPE 500

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P  VT+ +++ GFCK + I+ A +V  +M   G   G+  + SL++     G+ +EA  +
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM A G  P+V+   +LI+       V +AR +FD + E+G +P  +TY T+I  + K
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +E A  +   M   GV PD   YN L+ G  +   V+    + + +V +G++   VT
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +N+L+  L KDGK+ +A SL  EM  +EK++  P +V+Y +LI G  + G++ +A     
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEM--LEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQ 738

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           E++++G+IP   TY  +   + + G IP+
Sbjct: 739 EMIDRGIIPECHTYTSLIYSLAKAGRIPE 767



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 12/387 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E FK    YG K +  +   +++ L    + E+ +  + E       L++ S+  V+ 
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIK 371

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GL  + ++++A ++ E +K+ G SP VV Y  +IDG  K G I    K    F+DM  + 
Sbjct: 372 GLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN---FEDMSGSS 428

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            +P   T+  +IDG CK + +  A KVFE+M   G     +TY +LI+G     K+DEA 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L D M+  G +P  VT  ++++GFCK  ++ +A+ +   + E+G  P +  + +L+  Y
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
             +GR E+A+ +   M  RG  PDV  Y  LI  L   G V   R++ + ++  G     
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TY  ++    K G  + A  +L+    M K    P+   YN L+ G+ +  +++ A G+
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILE---LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKG 521
            + ++  G+ PN  T+ ++   + + G
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDG 692



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 198/423 (46%), Gaps = 40/423 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++CN +L  L K  K +    ++ EM     E  + S+N V++GL    K+++A
Sbjct: 15  GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGG--IGKM--------YKADA---------- 245
                 M   G  P V+ +  LI G+CK G   +G M        ++ D           
Sbjct: 75  YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGY 134

Query: 246 -----------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                      + ++M+  G +P+   +  LID  CK   +  A ++FE M   G     
Sbjct: 135 CKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDY 194

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+ +LI  L   GKLDEA  L  EM+  G +P +   ++LI   CK   V++A  ++  
Sbjct: 195 VTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQT 254

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + ++ S + YN+L+D YCK GR++D   +   M++    PD+ TYN L+AG SR   
Sbjct: 255 VVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANR 314

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +   L + G +    TY  ++  L    + ++A +  DE           ++++
Sbjct: 315 LDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL---------DVIS 365

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           Y  +IKG     ++++A  L  +L   G  PN   Y  V + +++ G I D   +  ++S
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425

Query: 535 GTS 537
           G+S
Sbjct: 426 GSS 428



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 178/346 (51%), Gaps = 7/346 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + + ++   ++    K     + + V  +M+ R  E  L  F  +L+     G+  +A
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M + G +P V+ Y  LID     G   ++ +A  VF  M+E G  P+ +T+ T+
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTG---RVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F K  N+ AA ++ E M   G+      YNSL++G     ++D+A  + D M+ASG+
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAF 384
           KPN VT N L++G  K    ++A  LF ++ E+  + P++++Y  LID   K GR+ +AF
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           +    M+DRG++P+  TY  LI  L++ G +   + ++ ++V  G+   +  Y+ L+  L
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
                   A  +  EM    K    PN VTY VL +GF   G+  D
Sbjct: 795 IDSSMVDTAWDVFQEMM---KRGCAPNEVTYKVLRRGFRAAGRALD 837



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 162/351 (46%), Gaps = 50/351 (14%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK--------------------------- 234
           + +A D +++M + G+ P VV  NI+++G CK                            
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 235 -----GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-------ISAAMKVF 282
                  I KM +A   F  M++NG  P+ + F TLI GFCK          ++ A+K F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
                      V  Y S+I+G C  G LD    + +EM+A+G  P+      LI+  CK 
Sbjct: 121 R--------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKL 172

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             V++A  LF+ + + G     +T+ TLI+A    G++++A  +   M++RG  P +   
Sbjct: 173 GRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQ 232

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + LI  L + G V+    I   +V   +    V YN L+   CK G+    + LL +M +
Sbjct: 233 DSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            +    +P+I TYN+L+ GF +  +L+DA  L   L   G  PN  TY  +
Sbjct: 293 CD---NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTI 340



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 20/314 (6%)

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           M +A    K+M   G++P+ V  N +++G CK   I  A+++F EM S G    +V+YN+
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +I+GL    K+DEA    + M+ +G +P+V+    LI+GFCK    +   +L +   ++ 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             P V  Y ++I  YCK G ++  F +   ML  G +PD + Y  LI  L + G V+   
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            +   +  +G     VT+  L+ AL   GK  +A  L  EM +   E   P +   + LI
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYE---PYLEVQDSLI 236

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFI 523
              C+ GK+++AN +   ++ K +  ++  Y  + +                +M+E    
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 524 PDIEGHMYNISGTS 537
           PDI+ +   ++G S
Sbjct: 297 PDIQTYNILVAGFS 310



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 9/321 (2%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
            I   L+  Y+   +    ++        G    V+    L+  L   G+  +  +V+  
Sbjct: 539 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 598

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  +    +  ++  ++    K G +  A +I+E M   GV P    YN L+DGY K   
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK--- 655

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVV 295
           + ++ +A  V+  MV +GI PN VTFN L+ G  KD     A  +F+EM     +   +V
Sbjct: 656 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLV 715

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y  LI+GL   G++ EA +   EM+  G+ P   T  +LI    K   + +A+ L +D+
Sbjct: 716 SYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG-- 413
            + G++P V  Y+ LI        ++ A+ +   M+ RG  P+  TY  L  G    G  
Sbjct: 776 VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 835

Query: 414 -NVEGVRNIMNELVNNGMRAG 433
            ++E V+   ++ V   M AG
Sbjct: 836 LDLEAVKQHFSQGV--AMEAG 854


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 223/446 (50%), Gaps = 16/446 (3%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFT--SVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           LL+ L  A+K+  +R+ L   V     T   VS +   +  C         + DML    
Sbjct: 67  LLYRLFAARKFAAMRTLLDSLVTTEVETKRPVSDVVSLVDECEFEPHFVETLCDMLFRVC 126

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE-DVEYVYKEMKRRRIELN 185
             N       + F    + GL     SC        K  K E  V +  + ++  R+++ 
Sbjct: 127 ADNRMFRDALKVFDYVMEKGLVVEGRSC-----FXKKCNKVELCVRFFRRMVESGRVDIG 181

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG-YCKKGGIGKMYKAD 244
           + S   V++ LC+ G++ +A ++M +M + GV P V TYN L++    +K   G     D
Sbjct: 182 VQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREG----VD 237

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   M   G++ + VT+  LI+ +   E I  A KV+EEM    +   V  Y S+I+  
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G +  A AL DEM+  G+ PN  T  ALI+G CK   +E A +L +++  +G+  +V
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           + +NT++D YCK G M++AF +++ M  +G   DV TYN L +GL +    E  + ++N 
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNV 417

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V  G+   +VT    +   C++G   +    L     +EK    PNIVTYN LI  + +
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLR---NIEKRGVVPNIVTYNTLIDAYSK 474

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY 510
             K++ A+ L  E++EKGL+P+  TY
Sbjct: 475 NEKVKQAHXLKAEMVEKGLLPDVFTY 500



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 193/366 (52%), Gaps = 6/366 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V + N LL A V     E V+ +   M+R  +  +L ++  ++     + ++ +A
Sbjct: 212 GVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEA 271

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+M    V   V  Y  +I   C+ G +    +A A+F +M+  GI+PN  TF  L
Sbjct: 272 EKVYEEMCERNVEMDVYVYTSMISWNCRAGNV---RRASALFDEMICRGIVPNTXTFGAL 328

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   + AA  + EEM   G+   VV +N++++G C  G +DEA  L+D M   G 
Sbjct: 329 ISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGF 388

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           + +V T N L +G CK    E+A+ + + + E+G++P+V+T  T I+ YC+EG + +   
Sbjct: 389 EADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPER 448

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
              ++  RGV+P++ TYN LI   S+   V+    +  E+V  G+   + TY  L+   C
Sbjct: 449 FLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGEC 508

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
              K  +A+ L +EM     +    N+ TY  +I G  ++G+ ++A  L +E++  GLIP
Sbjct: 509 IVDKVDEALKLFNEMLV---KGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIP 565

Query: 506 NQTTYQ 511
           +   ++
Sbjct: 566 DDRVFE 571



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 153/285 (53%), Gaps = 5/285 (1%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G       ++ EM  R I  N  +F  +++G+CKAG++  A  ++E+M+  GV   VV
Sbjct: 299 RAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVV 358

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKV 281
            +N ++DGYCK+G + + ++     +D++E  G   +  T+N L  G CK      A +V
Sbjct: 359 IFNTMMDGYCKRGMMDEAFR----LQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRV 414

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
              M   G+A  VVT  + I   C +G L E       +   G+ PN+VT N LI+ + K
Sbjct: 415 LNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSK 474

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + V++A  L  ++ E+GL P V TY +LI   C   ++++A  + N ML +G+  +V T
Sbjct: 475 NEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKT 534

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
           Y  +I+GLS+EG  +    + +E++  G+      +  LVG+L K
Sbjct: 535 YTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 153/292 (52%), Gaps = 12/292 (4%)

Query: 247 FKDMVENGILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           F+ MVE+G +   V +   ++D  C+   +  A ++  EM + G+   V TYN+L+N  C
Sbjct: 169 FRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNA-C 227

Query: 306 VDGKLDEAVALRDEMMA----SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           V  K  E V   DE++      G+  ++VT   LI  +   + + +A  +++++ E+ + 
Sbjct: 228 VVRKDREGV---DEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVE 284

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             V  Y ++I   C+ G +  A A+ + M+ RG++P+  T+  LI+G+ + G +E    +
Sbjct: 285 MDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEIL 344

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+   G+   +V +N ++   CK G   +A  L D    ME++    ++ TYN+L  G
Sbjct: 345 LEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQD---IMERKGFEADVFTYNILASG 401

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            C+  + E+A  +LN ++EKG+ PN  T     E   ++G + + E  + NI
Sbjct: 402 LCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNI 453


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C +++  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +V   M  +G+ P+  T + LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKSV---MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++   L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M++    PN VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRXGYXPNXVT 418



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 185/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   V+  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEI---RLAQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V T++ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++    + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R     Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G  PN 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNX 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M    KE    +   Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI---KENIRLDDXAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 232/484 (47%), Gaps = 46/484 (9%)

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
           L  + S++  G++L SLV  K YP + S  +    NG                  +  N 
Sbjct: 65  LNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNG------------------IKPNI 106

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           + + +L+  Y    +    F  F +    G   + ++   L++      K ++  + +  
Sbjct: 107 VSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDH 166

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +       N  S+  ++NGLCK G+   A  ++  ++   VS  VV Y+ +IDG CK   
Sbjct: 167 VLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKL 226

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +   Y+   ++ +M+   I P  VT N+LI G+C       A  +  EM    I   V T
Sbjct: 227 VNDAYE---LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYT 283

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL--------------------I 336
           +N L++ LC +GK+ EA +    MM  G+ P+VVT ++L                    I
Sbjct: 284 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVI 343

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NGFCK K+V+KA  LF ++  + ++P  +TYN+LID  CK GR+  A+ + + M D G  
Sbjct: 344 NGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQP 403

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA-VS 455
            D+ TYN LI  L +  +V+    ++ ++ + G++  + TYNIL+  LCK G+ K A V 
Sbjct: 404 ADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVI 463

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             D + K      W    TY ++I G C +G L +A  LL+++ + G +P+  T + +  
Sbjct: 464 FQDLLIKGYNLTVW----TYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIR 519

Query: 516 EMME 519
            + E
Sbjct: 520 ALFE 523



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 199/384 (51%), Gaps = 35/384 (9%)

Query: 78  KYPKIRSFLHMFVK-NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           K  + R+ L M  +  GK  S   + +  ST  D LC++ ++ D               +
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMY--STIIDGLCKDKLVND--------------AY 231

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E +       +  +V++ N L+      G+F++   + +EM  + I  ++ +FN +++ L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK GK+ +A   +  M   GV P VVTY+ L+DGYC    + ++ KA  V+         
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCL---VNEVNKAKHVY--------- 339

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
                 + +I+GFCK + +  A+ +F EM    IA   VTYNSLI+GLC  G++  A  L
Sbjct: 340 ------SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWEL 393

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM  SG   +++T N+LI+  CK   V+KA  L   I +QG+   + TYN LID  CK
Sbjct: 394 VDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCK 453

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +GR++DA  +   +L +G    V TY  +I GL  EG +     +++++ +NG     VT
Sbjct: 454 QGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVT 513

Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
              ++ AL ++ K+++A  LL EM
Sbjct: 514 CETIIRALFENDKNERAEKLLREM 537



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F  M     A  V+ +  +++ L         ++L  ++  +G+KPN+V+ + LIN +C 
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +  A  +F  I + G  P+ IT  TL+  +C   ++++A    + +L  G   +  +
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  LI GL + G       ++ ++    +   +V Y+ ++  LCKD     A  L  EM 
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
               ++  P +VT N LI G+C  G+ ++A GLL E++ K + P+  T+ I+ + + ++G
Sbjct: 239 ---TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEG 295

Query: 522 FIPD 525
            I +
Sbjct: 296 KIKE 299


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++       +C ++L  L+K   F+ V   Y+E+   
Sbjct: 71  GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 191 FRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG ++ AF  R  M+   +  D   Y  L +GL +EG       
Sbjct: 308 KPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK G   K   LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE---MQRDGHVPSVVT 418



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  L  G 
Sbjct: 304 VKGLKPDKITYTTLIDGCCKEGD-------LDSAFEHRKRMIQENIRLDEVAYTALXSGL 356

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 395



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 63  RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L   LC++
Sbjct: 300 DEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 53/264 (20%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y ++I+ LC    L EA                    +LI     +K    A  +F  I 
Sbjct: 16  YCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAAIX 56

Query: 357 EQ-GLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           E  G   S +  ++ LI AY + G + DA        +        T   ++  L +   
Sbjct: 57  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 116

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PN 471
            + V     E++  G  A L  +NIL+   CKDG  + A S+ D +       KW   P+
Sbjct: 117 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI------TKWGLRPS 170

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VRE 515
           +V+YN L+ G+ + G L++   L + +L  G+ P+  TY +                + +
Sbjct: 171 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 516 EMMEKGFIPD-------IEGHMYN 532
           EM+ KG +P+       I+GH  N
Sbjct: 231 EMLVKGLVPNGVTFTTLIDGHCKN 254


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/508 (30%), Positives = 246/508 (48%), Gaps = 45/508 (8%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM-----FVKNGKFTSVSTIFHALSTCS 109
           K+ +   S++    LL  L  A++  + R  L+      FV +G FT  S IF  L    
Sbjct: 163 KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDG-FT-YSIIFDGLLKSD 220

Query: 110 DS------LCRNSI---------IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
           D       L R +I            +L+    K  K     E  K   ++GL    +  
Sbjct: 221 DGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIY 280

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    + G  +      ++M+ R +  N  +FN V++  C+   ++KA + ++ M  
Sbjct: 281 NTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG 340

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P V TYNILIDGY   G +    +   + ++M ENG  PN +++ +LI+  CKD  
Sbjct: 341 KGIAPSVETYNILIDGY---GRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A  V  +M   G+      YN LI+G C  GKL EA+   DEM  +G+   +VT N+
Sbjct: 398 ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI G CK   +++A  +F  I+  G  P VITYN+LI  Y   G  +    +  +M   G
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLG 517

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + P ++T++ LI+G S+EG ++    + NE++   +    V YN ++    + G  +KA 
Sbjct: 518 LKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAF 576

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           SL  EM  M      P+  TYN LI G  ++GKL +   L++++  KGLIP   TY ++ 
Sbjct: 577 SLQKEMVDMGVR---PDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633

Query: 515 E----------------EMMEKGFIPDI 526
           +                EM+E GF+P++
Sbjct: 634 QGHCDLKDFNGAYVWYREMLENGFLPNV 661



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 224/465 (48%), Gaps = 44/465 (9%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +R  +   V++ KF +V  +F  +         + ++    MLA VK     L  E F+ 
Sbjct: 34  VRMIVESLVESKKFDNVLDLFKEMVGLG--FRPDKLVYGRAMLAAVKLGDLKLAMELFET 91

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
                +  +V   N L+  L KE +  D E ++ EM  R +  N  +FN +++G CKAG+
Sbjct: 92  MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGE 151

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           ++ A  + E MK   V P ++T+N L+ G CK     ++ +A  +  ++  NG +P+  T
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA---RRIEEARCMLNEIKCNGFVPDGFT 208

Query: 262 FNTLID------------------------------------GFCKDENISAAMKVFEEM 285
           ++ + D                                    G CK+  +  A +V + +
Sbjct: 209 YSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSL 268

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
             HG+  G V YN+++NG C  G +D A+   ++M + GL+PN +  N++I+ FC+ +++
Sbjct: 269 VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMI 328

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA      +  +G++PSV TYN LID Y +       F +   M + G  P+V +Y  L
Sbjct: 329 DKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL 388

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I  L ++G +     ++ ++V  G+      YN+L+   C  GK ++A+   DE   M K
Sbjct: 389 INCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDE---MSK 445

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                 IVTYN LIKG C+ GKL++A  +   +   G  P+  TY
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 37/329 (11%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F+  +   + G K +V+S   L+  L K+GK  + E V ++M  R +  N + +N +++G
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            C  GKL +A    ++M   G+   +VTYN LI G CK   +GK+ +A+ +F  +   G 
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK---MGKLKEAEEMFFLITSTGH 483

Query: 256 LPNEVTFNTLIDGF----------------------------------CKDENISAAMKV 281
            P+ +T+N+LI G+                                  C  E I     +
Sbjct: 484 CPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL 543

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F EM    ++   V YN++I+     G + +A +L+ EM+  G++P+  T N+LI G  K
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           +  + + + L DD+  +GL P   TY+ LI  +C       A+     ML+ G LP+V  
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            N L  GL ++G ++  ++I +E++ NGM
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 4/283 (1%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +FK+MV  G  P+++ +   +    K  ++  AM++FE M    +   V  YN LI GLC
Sbjct: 53  LFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLC 112

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            + ++ +A  L  EM    L PN VT N LI+G+CK   V+ A  L + + ++ + PS+I
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSII 172

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR-NIMNE 424
           T+N+L+   CK  R+E+A  M N +   G +PD  TY+ +  GL +  +  G   ++  E
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE 232

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            +  G++    T +IL+  LCK+GK +KA  +L  +    +    P  V YN ++ G+CQ
Sbjct: 233 AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLV---EHGLVPGEVIYNTIVNGYCQ 289

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            G ++ A   + ++  +GL PN   +  V ++  E   I   E
Sbjct: 290 IGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 137/273 (50%), Gaps = 4/273 (1%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   ++  M + G LP+      +++   + +     + +F+EM   G     + Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
                 G L  A+ L + M    + PNV   N LI G CK+K +  A  LF ++S + L 
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +T+NTLID YCK G ++ A  +R  M    V P + T+N L++GL +   +E  R +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 422 MNELVNNGMRAGLVTYNILVGALCK-DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +NE+  NG      TY+I+   L K D  +  A+ L  E   + K  K  N  T ++L+ 
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE--AIGKGVKIDN-YTCSILLN 250

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           G C++GK+E A  +L  L+E GL+P +  Y  +
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           +L  + ++ + ++  Y +       F   K   D G++    + N L+   +KEGK  + 
Sbjct: 551 NLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSET 610

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           + +  +MK + +    D+++ ++ G C     N A     +M   G  P V   N L  G
Sbjct: 611 KDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTG 670

Query: 231 YCKKGGIGKMYKADAVFKDMVENGI 255
             K    G++ +A ++  +M+ NG+
Sbjct: 671 LRKD---GRLQEAQSICSEMIANGM 692


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 222/440 (50%), Gaps = 17/440 (3%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           P + S+   L+ F K G      + +H +       D +  +SII      A  K     
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA-----ALCKAQAMD 253

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              E        G+    ++ N +L      G+ ++     K+M+   +E N+ +++ ++
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N LCK G+  +A  I + M   G+ P + TY  L+ GY  KG + +M+   A+   MV N
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH---ALLDLMVRN 370

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+   FN LI  + K E +  AM VF +M  HG+   VV Y ++I+ LC  G +D+A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +   ++M+  GL PN++   +LI+G C     +KA  L  ++ ++G+  + I +N++ID+
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CKEGR+ ++  + + M+  GV PD+ TYN LI G    G ++    ++  +V+ G++  
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY  L+   C+  +   A++L  EM         PNI+TYN++++G     +   A  
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMV---SSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L   + + G     +TY I+
Sbjct: 608 LYVSITKSGTQLELSTYNII 627



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 232/478 (48%), Gaps = 27/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTC--------------SDS 111
           ++ +L  A+   K    L+  VKNG      T   I H   +               SD 
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  N +    LM    KN +     + F      GL+  + +   LL+    +G   ++ 
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +   M R  I+ +   FN ++    K  K+++A  +   M+  G++P VV Y  +ID  
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G +     A   F+ M++ G+ PN + + +LI G C  +    A ++  EM   GI 
Sbjct: 422 CKSGSVDD---AMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              + +NS+I+  C +G++ E+  L D M+  G+KP+++T N LI+G C    +++A  L
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              +   G+ P ++TY TLI+ YC+  RM+DA A+   M+  GV P++ TYN ++ GL  
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE--MFKMEKEKKW 469
                  + +   +  +G +  L TYNI++  LCK+  + +A+ +     +  ++ E + 
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR- 657

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               T+N++I    + G++++A  L       GL+P+  TY ++ E ++E+G + +++
Sbjct: 658 ----TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 229/459 (49%), Gaps = 26/459 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-----LMLAYVKN---MKPHLG 135
           S ++   KNG+ T    IF       DS+ +  +  D+     L+  Y      ++ H  
Sbjct: 311 SLMNYLCKNGRSTEARKIF-------DSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            +   R G   ++      N L+ A  K+ K +    V+ +M++  +  N+  +  V++ 
Sbjct: 364 LDLMVRNG---IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCK+G ++ A    E M   G++P ++ Y  LI G C      K  KA+ +  +M++ GI
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT---CDKWDKAEELILEMLDRGI 477

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N + FN++ID  CK+  +  + K+F+ M   G+   ++TYN+LI+G C+ GK+DEA  
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L   M++ G+KP++VT   LING+C+   ++ A  LF ++   G+SP++ITYN ++    
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
              R   A  +  S+   G   ++STYN ++ GL +    +    +   L    ++    
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGL 494
           T+NI++GAL K G+  +A     ++F         P++ TY+++ +   ++G LE+ + L
Sbjct: 658 TFNIMIGALLKCGRMDEA----KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
              + E G   +      +  +++++G I     +++ I
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 752



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 197/376 (52%), Gaps = 4/376 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           +    RAG   +  +V +   L+    + G+ +        + ++   ++  +F  +L G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 196 LCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LC   + + A DI +  M  LG  P V +YN L+ G C +    +  +   +  D    G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NT+++GF K+ +   A   + EM   GI   VVTY+S+I  LC    +D+A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + + M+ +G+ P+ +T N++++G+C     ++A      +   G+ P+V+TY++L++  
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR  +A  + +SM  RG+ PD++TY  L+ G + +G +  +  +++ +V NG++   
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             +NIL+ A  K  K  +A+ +     KM +    PN+V Y  +I   C+ G ++DA   
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFS---KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 495 LNELLEKGLIPNQTTY 510
             +++++GL PN   Y
Sbjct: 434 FEQMIDEGLTPNIIVY 449



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 217/439 (49%), Gaps = 20/439 (4%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI-----IIDMLMLAYVKNMKPHLGFE 137
           R+ L  +   G    +    HAL    D + RN I     + ++L+ AY K  K      
Sbjct: 345 RTLLQGYATKGALVEM----HALL---DLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F +   +GL  +V+    ++  L K G  +D    +++M    +  N+  +  +++GLC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
              K +KA +++ +M   G+    + +N +ID +CK+G   ++ +++ +F  MV  G+ P
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG---RVIESEKLFDLMVRIGVKP 514

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +T+NTLIDG C    +  A K+   M S G+   +VTY +LING C   ++D+A+AL 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM++SG+ PN++T N ++ G    +    A+ L+  I++ G    + TYN ++   CK 
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
              ++A  M  ++    +  +  T+N +I  L + G ++  +++      NG+   + TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 438 NILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +++   L + G  ++    LD++F  ME+     +    N +++   Q+G +  A   L 
Sbjct: 695 SLMAENLIEQGSLEE----LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLF 750

Query: 497 ELLEKGLIPNQTTYQIVRE 515
            + EK      +T   + E
Sbjct: 751 MIDEKHFSLEASTASFLLE 769



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 1/155 (0%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           ++P+V TY  LI   C+ GR++  FA   +++ +G   D  T+  L+ GL  +       
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 420 NI-MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           +I +  +   G    + +YN L+  LC + +S++A+ LL  M         P++V+YN +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + GF ++G  + A    +E+L++G++P+  TY  +
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/321 (18%), Positives = 132/321 (41%), Gaps = 46/321 (14%)

Query: 99  STIFHALSTCSD--------------SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           +++ H L TC                 +C N+I  + ++ ++ K  +     + F     
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K  +++ N L+      GK ++   +   M    ++ ++ ++  ++NG C+  +++ 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDG--YCKKGGIGK-MY-------------------- 241
           A  + ++M S GVSP ++TYNI++ G  + ++    K +Y                    
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629

Query: 242 ---------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
                    +A  +F+++    +     TFN +I    K   +  A  +F    ++G+  
Sbjct: 630 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 689

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            V TY+ +   L   G L+E   L   M  +G   +    N+++    ++  + +A    
Sbjct: 690 DVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749

Query: 353 DDISEQGLSPSVITYNTLIDA 373
             I E+  S    T + L+++
Sbjct: 750 FMIDEKHFSLEASTASFLLES 770



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  R++ +EL+  G  A +   N  +  + +   +  AVS  + M +    K  P + TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMM 518
            +LI   C+ G+L+     L  +++KG   +  T+                  IV   M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 519 EKGFIPDI 526
           E G IPD+
Sbjct: 156 ELGCIPDV 163


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 219/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    V++ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C DG++D A+ +  +M++  L P+++T N LI G CK   +++A+ L +++S +GL
Sbjct: 248 IDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       L+ E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE---MQRDGYVPSVVT 418



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++   M + G+   V TY+ LINGLC + KLD+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N V+   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK G ++ A  + 
Sbjct: 240 NSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 NEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + L+ E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ ++
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVS 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK+GR++ A  +   ML + + PD+ TYN LI GL + G+++  ++++NE+ 
Sbjct: 244 FTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ FCK+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G + + F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    V++  L+   CKDG+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+ G L+ A  L+NE+  KGL P++ TY
Sbjct: 285 GLCKNGDLKQAQDLINEMSMKGLKPDKITY 314



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 53/262 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ + CK+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGH 529
           +EM++ G +P+       I+GH
Sbjct: 230 DEMLDNGLVPNSVSFTTLIDGH 251


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 203/401 (50%), Gaps = 23/401 (5%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           VK  +    +E F      G+  SV++ N L+ A   +G     + ++ +M  R+I+ N+
Sbjct: 154 VKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNV 213

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            ++  ++  LC+ G +  A  + + MK  G+ P   TYN+L+ G+C+   +   +    +
Sbjct: 214 ITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAF---VL 270

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++ +G++PN V F TLIDGFCK +  S A  +F +M   G+A  V  YNSL++G   
Sbjct: 271 YQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFR 330

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G   EA++L  EM   GL P+  T + ++ G C    ++ A    + + E G++ +   
Sbjct: 331 SGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAA 390

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN LID YC+ G +E+A A    M + GV P+V +Y+ LI G S+ G ++    I  E+V
Sbjct: 391 YNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMV 450

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   +VTY  L+    K+G    A     EM    +    PN +T +VL+ G C++ 
Sbjct: 451 AKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMI---ENGISPNAITVSVLVDGLCREN 507

Query: 487 KLEDANGLLNE-----------------LLEKGLIPNQTTY 510
           +++DA   + E                   E+ LIPN   Y
Sbjct: 508 RVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIY 548



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 198/385 (51%), Gaps = 25/385 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL + G  ++  YV++   R      L + N VL+GL KA +   A ++ ++M   G
Sbjct: 117 LVIALSQMGLLDEALYVFR---RLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRG 173

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVTYN LI+    +G +    KA  ++  MV   I PN +T+ ++I   C++  I 
Sbjct: 174 MVPSVVTYNTLINACRYQGAVA---KAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIG 230

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++F+ M   G+     TYN L++G C    ++ A  L  E++ SGL PN V    LI
Sbjct: 231 DAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLI 290

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GFCK K   +A+ +F D+   G++P+V  YN+L+D   + G  ++A ++   M   G+ 
Sbjct: 291 DGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLC 350

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  T + ++ GL   G ++     +  +  +G+      YN L+   C++G  ++A++ 
Sbjct: 351 PDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALAT 410

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--- 513
              M ++  E   PN+V+Y+ LI G  + GK++ A  +  E++ KG+ PN  TY  +   
Sbjct: 411 CTRMTEVGVE---PNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 467

Query: 514 -------------REEMMEKGFIPD 525
                         +EM+E G  P+
Sbjct: 468 HAKNGGIDAAFRFHKEMIENGISPN 492



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 184/367 (50%), Gaps = 22/367 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N    ++LM  + +    +  F  ++   + GL  + +    L+    K  +F + + ++
Sbjct: 247 NQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF 306

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M R  +   +  +N +++G  ++G   +A  + ++M  LG+ P   T +I++ G C  
Sbjct: 307 RDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDG 366

Query: 235 GGIGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           G I    +  A F + V E+G+  N   +N LID +C++ N+  A+     M   G+   
Sbjct: 367 GQI----QVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPN 422

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VV+Y+SLI+G    GK+  A+A+  EM+A G++PNVVT  ALI+G  K   ++ A     
Sbjct: 423 VVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHK 482

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDA--FAMRNSML---------------DRGVL 396
           ++ E G+SP+ IT + L+D  C+E R++DA  F M +S +               +  ++
Sbjct: 483 EMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLI 542

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+ + Y  LI GL  +G       + + +  +GM +   TY +L+   C  G    A+ L
Sbjct: 543 PNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMML 602

Query: 457 LDEMFKM 463
             +M K+
Sbjct: 603 YADMMKI 609



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 24/323 (7%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N+++   L+  + K  +     + F+    +G+  +V   N L+    + G  ++  
Sbjct: 279 LIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338

Query: 172 YVYKEMKRRRIELNLDSF--NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            +Y+EM R  + L  D F  + V+ GLC  G++  A+  +E ++  GV+     YN LID
Sbjct: 339 SLYQEMTR--LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALID 396

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            YC+    G + +A A    M E G+ PN V++++LIDG  K   +  AM ++ EM + G
Sbjct: 397 EYCRN---GNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKG 453

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV---- 345
           I   VVTY +LI+G   +G +D A     EM+ +G+ PN +T + L++G C++  V    
Sbjct: 454 IEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV 513

Query: 346 ----EKARVLFDDI---------SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
               E + + + DI          E+ L P+   Y TLI     +G+  +A  + + M  
Sbjct: 514 RFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRK 573

Query: 393 RGVLPDVSTYNCLIAGLSREGNV 415
            G++ D  TY  LI G    G V
Sbjct: 574 SGMISDSFTYTLLIRGQCMLGYV 596



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 20/234 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  + N L+    + G  E+       M    +E N+ S++ +++G  K GK+  A
Sbjct: 383 GVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIA 442

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I  +M + G+ P VVTY  LI G+ K GGI   ++     K+M+ENGI PN +T + L
Sbjct: 443 MAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR---FHKEMIENGISPNAITVSVL 499

Query: 266 IDGFCKDENISAAMK-VFEEMGS-----HGIAAGVVT-----------YNSLINGLCVDG 308
           +DG C++  +  A++ V E  G      H   +   T           Y +LI GL +DG
Sbjct: 500 VDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDG 559

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           +  EA  L   M  SG+  +  T   LI G C    V  A +L+ D+ + G+ P
Sbjct: 560 QHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 14/232 (6%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D +  N+   + L+  Y +N           R  + G++ +V+S + L+    K GK + 
Sbjct: 382 DGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQI 441

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +Y EM  + IE N+ ++  +++G  K G ++ A    ++M   G+SP  +T ++L+D
Sbjct: 442 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVD 501

Query: 230 GYCKKGGIG------------KMYKADAVFKDMV--ENGILPNEVTFNTLIDGFCKDENI 275
           G C++  +             K     + F +    E  ++PN   + TLI G   D   
Sbjct: 502 GLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQH 561

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             A K+F  M   G+ +   TY  LI G C+ G +  A+ L  +MM  G+KP
Sbjct: 562 YEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 216/448 (48%), Gaps = 64/448 (14%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  K+ G++    S+ S N  L  L++ GK  +   V  EM    IE N+ S+N V++GL
Sbjct: 317 ETMKKGGNF---VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+   +  A  +M+ M S GV P  VTY  L+ GYC KG   K+++A A+  +M+  G  
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKG---KVFEAKAILNEMIRKGCH 430

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  T NTL++   K+   S A ++ ++M         VT N ++NGLC +G+L++A  +
Sbjct: 431 PNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV 490

Query: 317 RDEMMASGLK----------------------PNVVTSNALINGFCKKKLVEKARVLFDD 354
             EM   G                        P+V+T   LING CK   +E+A+  F +
Sbjct: 491 VSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIE 550

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + L P  +TY+T +  +CK+G++  A  +   M   G    + TYN LI GL  +G 
Sbjct: 551 MMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQ 610

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +  +  +M+E+   G+   + TYN ++  LC+ GK+K A SLL EM  ++K    PN+ +
Sbjct: 611 IFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEM--LDKGVVSPNVSS 668

Query: 475 YNVLIKGFCQK----------------------------------GKLEDANGLLNELLE 500
           + +LIK FC+                                   GKL DA  L    LE
Sbjct: 669 FKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLE 728

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           + L+     Y+ + +++ + G + D  G
Sbjct: 729 RSLLSKNFMYEDLIDKLCKDGRLDDAHG 756



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 210/398 (52%), Gaps = 30/398 (7%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNG 195
           E F +  + G + +  +   L+R   + G+ +  +E+V  +M      +N   +N +++ 
Sbjct: 172 ELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGG---NVNRVVYNTLVSS 228

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            CK    ++A  ++E M   G+ P VVT+N  I   C+ G   K+++A  +F+DM  +G 
Sbjct: 229 FCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAG---KVFEASRIFRDMQMDGE 285

Query: 256 L----PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           L    PN VTFN ++ GFC++  +  A  + E M   G    + +YN+ + GL  +GKL 
Sbjct: 286 LGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLL 345

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           E  ++ DEM+ +G++PN+ + N +++G C+  ++  AR L D +   G+ P  +TY TL+
Sbjct: 346 EGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             YC +G++ +A A+ N M+ +G  P+  T N L+  L +EG       ++ ++     +
Sbjct: 406 HGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQ 465

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMF-----KMEKEK--------------KWPNI 472
              VT NI+V  LC++G+ +KA  ++ EM+      + KE                 P++
Sbjct: 466 LDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDV 525

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +TY  LI G C+ GKLE+A     E++ K L P+  TY
Sbjct: 526 ITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTY 563



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 170/321 (52%), Gaps = 12/321 (3%)

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            + +  DM   GV+P+  T+N+LI   C+   +     A  +F  M E G  PN+ T   
Sbjct: 135 VTSLYTDMIQTGVNPETYTFNLLIQSLCESNALD---HARELFDKMSEKGCQPNKFTVGI 191

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ GFC+      A++  +  G  G     V YN+L++  C     DEA  L + M   G
Sbjct: 192 LVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDIS---EQGL-SPSVITYNTLIDAYCKEGRM 380
           L P+VVT N+ I+  C+   V +A  +F D+    E GL  P+V+T+N ++  +C+EG M
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMM 309

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A ++  +M   G    + +YN  + GL R G +   R++++E+V NG+   + +YNI+
Sbjct: 310 EEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIV 369

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LC++     A  L+D M        +P+ VTY  L+ G+C KGK+ +A  +LNE++ 
Sbjct: 370 MDGLCRNHMMLDARRLMDLMV---SNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
           KG  PN  T   +   + ++G
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEG 447



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 120/445 (26%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID---------------------M 121
           RS L   V+NG    +    ++ +   D LCRN +++D                      
Sbjct: 348 RSVLDEMVENG----IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTT 403

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y    K              G   +  +CN LL +L KEG+  + E + ++M  + 
Sbjct: 404 LLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKS 463

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS----------------------P 219
            +L+  + N V+NGLC+ G+L KAS+++ +M + G +                      P
Sbjct: 464 YQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVP 523

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            V+TY  LI+G CK   +GK+ +A   F +M+   + P+ VT++T +  FCK   IS+A+
Sbjct: 524 DVITYTTLINGLCK---VGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSAL 580

Query: 280 KVF-----------------------------------EEMGSHGIAAGVVTYNSLINGL 304
           +V                                    +EM   GI   + TYN++IN L
Sbjct: 581 RVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640

Query: 305 CVDGKLDEAVALRDEMMASGL-KPNVVTSNALINGFCKKKLVEKARVLFD---------- 353
           C  GK  +A +L  EM+  G+  PNV +   LI  FCK    + A  LFD          
Sbjct: 641 CEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKE 700

Query: 354 --------------------DISEQGLSPSVIT----YNTLIDAYCKEGRMEDAFAMRNS 389
                               ++ E  L  S+++    Y  LID  CK+GR++DA  +   
Sbjct: 701 ALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQK 760

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGN 414
           ++D+G   D S++  +I GLS+ GN
Sbjct: 761 LIDKGYCFDHSSFIPVIDGLSKRGN 785



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 23/239 (9%)

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             +L  +M+ +G+ P   T N LI   C+   ++ AR LFD +SE+G  P+  T   L+ 
Sbjct: 135 VTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVR 194

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +C+ GR + A    +  +   V  +   YN L++   ++   +    ++  +   G+  
Sbjct: 195 GFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLP 252

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLED 490
            +VT+N  + ALC+ GK  +A  +  +M +M+ E     PN+VT+N+++KGFCQ+G +E+
Sbjct: 253 DVVTFNSRISALCRAGKVFEASRIFRDM-QMDGELGLPKPNVVTFNLMLKGFCQEGMMEE 311

Query: 491 ANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNI 533
           A  L+  + + G   +  +Y                  V +EM+E G  P+I  + YNI
Sbjct: 312 ARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNI--YSYNI 368



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 32/234 (13%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S+  D  +L + K  K        K     G   ++ + N L+  L  +G+  ++  + 
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCK 233
            EM+ R I  ++ ++N ++N LC+ GK   A+ ++ +M   GV SP V ++ ILI  +CK
Sbjct: 619 DEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678

Query: 234 KGGI-------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
            G                                 GK+  A  +F+  +E  +L     +
Sbjct: 679 SGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMY 738

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
             LID  CKD  +  A  + +++   G      ++  +I+GL   G   +A  L
Sbjct: 739 EDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 245/497 (49%), Gaps = 55/497 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST------IFHALSTCSDSLCRNSIIIDML 122
             H ++    +P I+ F  +F    K    +T      I H+L   S  +C  +I I+ L
Sbjct: 61  FFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCL 120

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG----------KFEDVEY 172
                   K  LGF         GL+ ++++ N ++  L  EG          K E++ Y
Sbjct: 121 ----CHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGY 176

Query: 173 -------------------------VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
                                      K+M +R +  N+  +N +L+GLCK G + +A  
Sbjct: 177 HCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALG 236

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTLI 266
           ++ +M  + V P VVTYN LI G C  G  G   +   +F +MV E GI+P+  TF+ L+
Sbjct: 237 LLHEMGVVNVEPNVVTYNCLIQGLC--GEFGGWREGVGLFNEMVAEKGIVPDVQTFSILV 294

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM--ASG 324
           DGFCK+  +  A  V   M   G+   VVTYNSLI G C+  +++EA+ +   M+    G
Sbjct: 295 DGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEG 354

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT N+LI+G+CK K V+KA  L  ++  +GL P V T+ +LI  +C+  +   A 
Sbjct: 355 CLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAR 414

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  +M + G +P++ T   ++ GL +         +   ++ +G+   +V YNI++  +
Sbjct: 415 ELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGM 474

Query: 445 CKDGKSKKAVSLLD-EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           CK GK   A  LL   + K  K   +    TYN++IKG C++G L+DA  LL ++ E G 
Sbjct: 475 CKMGKLNDARKLLSCVLVKGLKIDSY----TYNIMIKGLCREGLLDDAEELLRKMKENGC 530

Query: 504 IPNQTTYQIVREEMMEK 520
            PN+ +Y +  + ++ K
Sbjct: 531 PPNKCSYNVFVQGLLRK 547



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 191/376 (50%), Gaps = 26/376 (6%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE-GKFE 168
           D LC+  ++ + L L +                G   ++ +V++ N L++ L  E G + 
Sbjct: 223 DGLCKRGLVGEALGLLH--------------EMGVVNVEPNVVTYNCLIQGLCGEFGGWR 268

Query: 169 DVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +   ++ EM   + I  ++ +F+ +++G CK G L +A  ++  M  +GV P VVTYN L
Sbjct: 269 EGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSL 328

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I GYC +    +M +A  VF  MV  G   LP+ VT N+LI G+CK + +  AM +  EM
Sbjct: 329 IAGYCLRS---QMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEM 385

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+   V T+ SLI G C   K   A  L   M   G  PN+ T   +++G  K  L 
Sbjct: 386 VGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLD 445

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  LF  + + GL   ++ YN ++D  CK G++ DA  + + +L +G+  D  TYN +
Sbjct: 446 SEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIM 505

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I GL REG ++    ++ ++  NG      +YN+ V  L +    K  ++   +  ++ K
Sbjct: 506 IKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR----KYDIARSRKYLQIMK 561

Query: 466 EKKWP-NIVTYNVLIK 480
           +K +P +  T  +LI+
Sbjct: 562 DKGFPVDATTAELLIR 577



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 164/343 (47%), Gaps = 27/343 (7%)

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A D    M +L   P +  +N+L     K            +   + +     +  T N 
Sbjct: 58  AVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGS--ADVCTLNI 115

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            I+  C     +    V   M   G+   +VT N+++NGLC++G ++ A+ L ++M   G
Sbjct: 116 AINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLG 175

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
              N  T  AL+NG CK      A      + ++ L P+V+ YN ++D  CK G + +A 
Sbjct: 176 YHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEAL 235

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSRE--GNVEGVRNIMNELV-NNGMRAGLVTYNILV 441
            + + M    V P+V TYNCLI GL  E  G  EGV  + NE+V   G+   + T++ILV
Sbjct: 236 GLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGV-GLFNEMVAEKGIVPDVQTFSILV 294

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE- 500
              CK+G   +A S++  M ++  E   PN+VTYN LI G+C + ++E+A  +   ++  
Sbjct: 295 DGFCKEGLLLRAESVVGFMVRIGVE---PNVVTYNSLIAGYCLRSQMEEAMRVFGLMVRE 351

Query: 501 -KGLIPNQTTYQI-------VRE---------EMMEKGFIPDI 526
            +G +P+  T+         V+E         EM+ KG  PD+
Sbjct: 352 GEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDV 394



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 5/308 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   V + + L+    KEG     E V   M R  +E N+ ++N ++ G C   ++ +A
Sbjct: 282 GIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEA 341

Query: 206 SDIMEDM--KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
             +   M  +  G  P VVT+N LI G+CK   + ++ KA ++  +MV  G+ P+  T+ 
Sbjct: 342 MRVFGLMVREGEGCLPSVVTHNSLIHGWCK---VKEVDKAMSLLSEMVGKGLDPDVFTWT 398

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI GFC+ +   AA ++F  M  HG    + T   +++GL       EAV L   MM S
Sbjct: 399 SLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKS 458

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL  ++V  N +++G CK   +  AR L   +  +GL     TYN +I   C+EG ++DA
Sbjct: 459 GLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDA 518

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M + G  P+  +YN  + GL R+ ++   R  +  + + G      T  +L+  
Sbjct: 519 EELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRF 578

Query: 444 LCKDGKSK 451
           L  + + K
Sbjct: 579 LSANEEDK 586



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +V T N  IN  C  +       +   +++ GL P+++T NT+++  C EG +  A  + 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M + G   +  TY  L+ GL + G+  G    + ++V   +   +V YN ++  LCK 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK-GKLEDANGLLNELLEKGLIPN 506
           G   +A+ LL EM  +  E   PN+VTYN LI+G C + G   +  GL NE++       
Sbjct: 229 GLVGEALGLLHEMGVVNVE---PNVVTYNCLIQGLCGEFGGWREGVGLFNEMVA------ 279

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
                       EKG +PD++
Sbjct: 280 ------------EKGIVPDVQ 288



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV T N  I  L           ++  +   G+   LVT N +V  LC +G    A+ L+
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
           +   KME      N  TY  L+ G C+ G    A   L +++++ L PN   Y  + + +
Sbjct: 169 E---KMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGL 225

Query: 518 MEKGFIPDIEGHMYNI 533
            ++G + +  G ++ +
Sbjct: 226 CKRGLVGEALGLLHEM 241


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 238/501 (47%), Gaps = 70/501 (13%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM-----LAYVKNMKPHLGFEA 138
           + L+  ++    T   ++  AL    D++  N+++  +       L   +++   +  EA
Sbjct: 56  ALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREA 115

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
              A     + + +S   ++R L    +  +   + + M+   +  ++ ++  ++ GLC 
Sbjct: 116 HPAA-----RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCD 170

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A +L+ A +++++M   GV P VV Y+ L+ GYC+ G   +      VF+DM   GI P+
Sbjct: 171 ASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSG---RWQDVGKVFEDMSRRGIKPD 227

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            + F  LID  CK+     A KV + M   G+   VVTYN LIN LC +G + EA+ LR 
Sbjct: 228 VIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRK 287

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI--SEQGLSPSVITYNTLIDAYCK 376
           EM   G+ P+VVT N LI G      +++A    +++   +  + P V+T+N++I   CK
Sbjct: 288 EMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCK 347

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GRM  A  +R  M +RG + ++ TYN LI G  R   V+   N+M+EL  +G+     T
Sbjct: 348 IGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFT 407

Query: 437 YNILV-----------------------------------GALCKDGKSKKAVSLLDEMF 461
           Y+IL+                                    A+C+ G  ++A+ L +EM 
Sbjct: 408 YSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD 467

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------- 512
           K        + + Y+ +I G C+ G ++    L+ ++L++GL P+  TY +         
Sbjct: 468 K----NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLG 523

Query: 513 -------VREEMMEKGFIPDI 526
                  V ++M   GF+PD+
Sbjct: 524 DLEEAERVLKQMTASGFVPDV 544



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 206/368 (55%), Gaps = 11/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +V+  + LLR   + G+++DV  V+++M RR I+ ++  F  +++ LCK GK  KA
Sbjct: 188 GVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKA 247

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + + + M   G+ P VVTYN+LI+  CK+G +    +A  + K+M + G+ P+ VT+NTL
Sbjct: 248 AKVKDMMVQRGLEPNVVTYNVLINSLCKEGSV---REALTLRKEMDDKGVAPDVVTYNTL 304

Query: 266 IDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           I G      +  AM   EEM  G   +   VVT+NS+I+GLC  G++ +AV +R+ M   
Sbjct: 305 IAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G   N+VT N LI GF +   V+ A  L D+++  GL P   TY+ LI+ + K   ++ A
Sbjct: 365 GCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRA 424

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVG 442
                +M  RG+  ++  Y  L+A + ++G +E    + NE+  N G+ A  + Y+ ++ 
Sbjct: 425 EKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDA--IAYSTMIH 482

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             CK G  K    L+ +M     E   P+ VTY++LI  + + G LE+A  +L ++   G
Sbjct: 483 GACKSGDMKTVKQLIQDMLD---EGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539

Query: 503 LIPNQTTY 510
            +P+   +
Sbjct: 540 FVPDVAVF 547



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 210/396 (53%), Gaps = 9/396 (2%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +  N ++   L+  Y ++ +     + F+     G+K  V+    L+  L KEGK 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
                V   M +R +E N+ ++N ++N LCK G + +A  + ++M   GV+P VVTYN L
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGIL--PNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           I G     G+ +M +A +  ++M++   +  P+ VTFN++I G CK   ++ A+KV E M
Sbjct: 305 IAGL---SGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMM 361

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    +VTYN LI G     K+  A+ L DE+  SGL+P+  T + LINGF K   V
Sbjct: 362 AERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEV 421

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           ++A      + ++G+   +  Y  L+ A C++G ME A  + N M D+    D   Y+ +
Sbjct: 422 DRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTM 480

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G  + G+++ V+ ++ ++++ G+    VTY++L+    K G  ++A  +L +   M  
Sbjct: 481 IHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQ---MTA 537

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
               P++  ++ LIKG+  +G+ +    L++E+  K
Sbjct: 538 SGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 27/248 (10%)

Query: 295 VTYNSLINGLCVDG--KLDEAVALRDEM---MASGLKPNVVTSNALINGFCKKKLVEKAR 349
           V+YN+++  LC  G   L +A +L  +M        +PN V+   ++ G C  +   +A 
Sbjct: 84  VSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAV 143

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   +   G+   V+TY TLI   C    ++ A  + + M   GV P+V  Y+CL+ G 
Sbjct: 144 ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGY 203

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            R G  + V  +  ++   G++  ++ +  L+  LCK+GK+ KA  + D M +   E   
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE--- 260

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           PN+VTYNVLI   C++G + +A  L                   R+EM +KG  PD+  +
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTL-------------------RKEMDDKGVAPDVVTY 301

Query: 530 MYNISGTS 537
              I+G S
Sbjct: 302 NTLIAGLS 309



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 6/284 (2%)

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           L+ V  M   + F      GD  ++  V++ N ++  L K G+      V + M  R   
Sbjct: 308 LSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCM 367

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            NL ++N+++ G  +  K+  A ++M+++   G+ P   TY+ILI+G+ K   + ++ +A
Sbjct: 368 CNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK---MWEVDRA 424

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLIN 302
           +     M + GI      +  L+   C+   +  AM +F EM  + G+ A  + Y+++I+
Sbjct: 425 EKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDA--IAYSTMIH 482

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C  G +     L  +M+  GL P+ VT + LIN + K   +E+A  +   ++  G  P
Sbjct: 483 GACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVP 542

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            V  +++LI  Y  EG+ +    + + M  + V  D    + +I
Sbjct: 543 DVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 220/432 (50%), Gaps = 57/432 (13%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA----- 199
           Y    +VLS N ++  L KEG+ +    ++ EM  +    N+ ++N V++GLCKA     
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192

Query: 200 -----------GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
                      G+L +A  +++ M   G+ P VVTY++LID YCK   IG+  +A  +F 
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCK---IGRCTEARNIFD 249

Query: 249 DMVENGILPNEVTFNTLIDGFC-----------------------------------KDE 273
            MV  G  P+  T+ TL+ G+                                    K+E
Sbjct: 250 SMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNE 309

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  AM  F EM   G +  VVTY ++I+ LC  G++++AV+   +M++ GL P+++T  
Sbjct: 310 TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFT 369

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +LI+G C     +K   L  ++  +G+ P+ I  NT++D+ CKEGR+ +A    + ++  
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV 429

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           GV PDV +Y  LI G   +G ++    ++  +V+ G+R   VTY+ L+   CK+G+   A
Sbjct: 430 GVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDA 489

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++L  EMF  + +   PN +TYN+++ G    G++  A     ++++ G+     TY IV
Sbjct: 490 LALYREMFSKDVK---PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546

Query: 514 REEMMEKGFIPD 525
              + E  F+ +
Sbjct: 547 LGGLCENSFVDE 558



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 200/370 (54%), Gaps = 8/370 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL     +G   D+  +   M +  I L    FN ++    K   L+KA     +M+  G
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            SP VVTY  +ID  CK G   ++  A + F  MV  G+ P+ +TF +LI G C      
Sbjct: 326 FSPNVVTYTTVIDILCKAG---RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              K+  EM + GI    +  N++++ LC +G++ EA    D+++  G+KP+VV+   LI
Sbjct: 383 KVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILI 442

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+C    ++++  L   +   GL P  +TY+ L++ YCK GR++DA A+   M  + V 
Sbjct: 443 DGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVK 502

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+  TYN ++ GL   G V   R    ++V++G++ G+ TYNI++G LC++    +A+  
Sbjct: 503 PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEAL-- 560

Query: 457 LDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
              MF+  + K++   + T+N++I G  + G++ DA  L + +L  GL+P+   Y ++ +
Sbjct: 561 --RMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQ 618

Query: 516 EMMEKGFIPD 525
             +E+G + +
Sbjct: 619 SHIEEGLLEE 628



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 222/450 (49%), Gaps = 16/450 (3%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           R+ LH +   G    +  +   +    D +     + ++L+ AY KN        AF   
Sbjct: 264 RTLLHGYATKGALVDMHDLLALM--IQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              G   +V++   ++  L K G+ ED    + +M    +  ++ +F  +++GLC  G+ 
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            K   +  +M + G+ P  +  N ++D  CK+G   ++ +A   F  ++  G+ P+ V++
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG---RVLEAHDFFDQIIHVGVKPDVVSY 438

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             LIDG+C D  +  ++K+   M S G+    VTY++L+NG C +G++D+A+AL  EM +
Sbjct: 439 TILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFS 498

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             +KPN +T N +++G      V  AR  +  I + G+   + TYN ++   C+   +++
Sbjct: 499 KDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDE 558

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  M   +  +    +V T+N +I GL + G +   +++ + ++ +G+    + Y +++ 
Sbjct: 559 ALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQ 618

Query: 443 ALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           +  ++G  +++    DE+F  MEK     N  T N +++   +KG +  A   L ++ EK
Sbjct: 619 SHIEEGLLEES----DELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674

Query: 502 GLIPNQTT----YQIVREEMMEK--GFIPD 525
                 +T      IV E   +K   F+P+
Sbjct: 675 EYSVEASTAVLLISIVSERKYQKEVKFLPE 704



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 68/392 (17%)

Query: 153 SCNQLLRALVKEGK-----FEDVEYVYKEMKRRRIELNLDSFNFVL----NGLCKAGKLN 203
           +C QL R +V++ +      ED   ++ E+  R    ++ +FN VL    +G   + + +
Sbjct: 11  TCLQLERIIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRH 70

Query: 204 KAS---DIMEDMKSLGV---SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            A+    +   M  +GV   +    T+ ILI  +C  G                      
Sbjct: 71  GAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVG---------------------- 108

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI--AAGVVTYNSLINGLCVDGKLDEAVA 315
                  L+D F  +E    +      M   G      V++YN +INGL  +G++D+A  
Sbjct: 109 -------LLD-FALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYT 160

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV----LFDD------------ISEQG 359
           L  EM+  G  PN+VT N++I+G CK + ++KA      +FD             +S  G
Sbjct: 161 LFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGG 220

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P V+TY+ LID YCK GR  +A  + +SM+ RG  PD  TY  L+ G + +G +  + 
Sbjct: 221 LQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMH 280

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVL 478
           +++  ++ +G+      +NIL+ A  K+    KA++   EM    ++K + PN+VTY  +
Sbjct: 281 DLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM----RQKGFSPNVVTYTTV 336

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I   C+ G++EDA    ++++ +GL P+  T+
Sbjct: 337 IDILCKAGRVEDAVSHFSQMVSEGLSPDIITF 368



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 125/283 (44%), Gaps = 36/283 (12%)

Query: 278 AMKVFEEMGSHGI---AAGVVTYNSLINGLCVDGKLDEAVALRDE---------MMAS-- 323
           A+ +F  M   G+   A    T+  LI   C  G LD   AL +E         MMA   
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLD--FALEEESRGSRAAVHMMADDG 132

Query: 324 -GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
               PNV++ N +ING  K+  V+KA  LF ++  QG  P+++TYN++ID  CK   M+ 
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192

Query: 383 AFAMRNSMLDRGVL----------------PDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           A A+   M D+G L                PDV TY+ LI    + G     RNI + +V
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G      TY  L+      G     V + D +  M ++        +N+LI+ + +  
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGA---LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNE 309

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
            L+ A     E+ +KG  PN  TY  V + + + G + D   H
Sbjct: 310 TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSH 352



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 47/271 (17%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALI-------NGFCKKKLVEKARVLFDDISEQG--- 359
           L++A+ L DE++      +V   N ++       +   ++     A  LF+ +++ G   
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAF--------AMRNSMLDRG--VLPDVSTYNCLIAGL 409
           L+    T+  LI  +C  G ++ A         A  + M D G    P+V +YN +I GL
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------- 461
            +EG V+    + +E++  G    +VTYN ++  LCK     KA ++L +MF        
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 462 -----KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                KM      P++VTY++LI  +C+ G+  +A  + + ++ +G  P+  TY+ +   
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 517 MMEKGFIPD--------------IEGHMYNI 533
              KG + D              +E H++NI
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNI 300


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 219/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E  +   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       L+ E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKE---MQRDGYVPSVVT 418



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D     +  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  +CK+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  + +   I TY ++I  FC+KG +   + L+ E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLKLE---IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 159/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL     TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKG 395



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K  + A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKDSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ + CK+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 211/409 (51%), Gaps = 37/409 (9%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S ++  N++L +LVK   +  V  + K+M  + IE NL + + ++N  C  G++  +  +
Sbjct: 8   SPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSL 67

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------ADAVFKDMVENGIL------ 256
           +  +  LG  P  +T+  L+ G C KG + K+        A A   + V  G L      
Sbjct: 68  LGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCK 127

Query: 257 --------------------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                               PN V ++ +IDG CKD+ ++ A  ++ EM +  I   V+T
Sbjct: 128 TGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVIT 187

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           YN+LI   C+ G+L  A +L  EM+   + P+V T + LI+  CK+   + A+ +F  + 
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMV 245

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           + G++P+V +YN +I+  CK  R+++A  +   ML + ++PD  TYN LI GL + G + 
Sbjct: 246 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 305

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N+MNE+ + G  A +VTY  L+ ALCK+    KA +L     KM++    P + TY 
Sbjct: 306 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF---MKMKERGIQPTMYTYT 362

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            LI G C+ G+L++A  L   LL KG   +  TY ++   + ++G   +
Sbjct: 363 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 208/406 (51%), Gaps = 13/406 (3%)

Query: 120 DMLMLAYVKNMKPHLGFEAFK-----RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +++ L+ + N   HLG  AF      +    G   + ++   L++ L  +G+ + + + +
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++  +  + N  S+  +LNGLCK G+   A  ++  ++     P VV Y+ +IDG CK 
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + + Y    ++ +M    I PN +T+NTLI  FC    +  A  +  EM    I   V
Sbjct: 164 KLVNEAYD---LYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDV 220

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            T++ LI+ LC +GK   A  +   M+  G+ PNV + N +ING CK K V++A  L  +
Sbjct: 221 YTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 278

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + + P  +TYN+LID  CK GR+  A  + N M  RG   DV TY  L+  L +  N
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++    +  ++   G++  + TY  L+  LCK G+ K A  L   +     +    ++ T
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL---VKGCCIDVWT 395

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           Y V+I G C++G  ++A  + +++ + G IPN  T++I+   + EK
Sbjct: 396 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 197/359 (54%), Gaps = 8/359 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
             +++ +S   LL  L K G+      + + ++ R    N+  ++ +++GLCK   +N+A
Sbjct: 110 AFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEA 169

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D+  +M +  + P V+TYN LI  +C  G   ++  A ++  +M+   I P+  TF+ L
Sbjct: 170 YDLYSEMDAREIFPNVITYNTLICAFCLAG---QLMGAFSLLHEMILKNINPDVYTFSIL 226

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK+     A ++F  M   G+   V +YN +INGLC   ++DEA+ L  EM+   +
Sbjct: 227 IDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 284

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ VT N+LI+G CK   +  A  L +++  +G    V+TY +L+DA CK   ++ A A
Sbjct: 285 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATA 344

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M +RG+ P + TY  LI GL + G ++  + +   L+  G    + TY +++  LC
Sbjct: 345 LFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLC 404

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K+G   +A+++     KME     PN VT+ ++I+   +K + + A  LL+E++ KGL+
Sbjct: 405 KEGMFDEALAIKS---KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 178/317 (56%), Gaps = 5/317 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   + +V+  + ++  L K+    +   +Y EM  R I  N+ ++N ++   C AG+L 
Sbjct: 143 DRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLM 202

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  ++ +M    ++P V T++ILID  CK+G       A  +F  MV+ G+ PN  ++N
Sbjct: 203 GAFSLLHEMILKNINPDVYTFSILIDALCKEGK-----NAKQIFHAMVQMGVNPNVYSYN 257

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+G CK + +  AM +  EM    +    VTYNSLI+GLC  G++  A+ L +EM   
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G   +VVT  +L++  CK + ++KA  LF  + E+G+ P++ TY  LID  CK GR+++A
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   +L +G   DV TY  +I+GL +EG  +    I +++ +NG     VT+ I++ +
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 444 LCKDGKSKKAVSLLDEM 460
           L +  ++ KA  LL EM
Sbjct: 438 LFEKDENDKAEKLLHEM 454


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 214/427 (50%), Gaps = 27/427 (6%)

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
           ++T    +S C D+ C N                  LGF A  +    GL++  ++   L
Sbjct: 144 IATFGILISCCCDAGCLN------------------LGFAALGQIIKTGLRAQAVTFTPL 185

Query: 158 LRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LR L  E +  D +  V + M       ++ S+  +L GLC   K  +A++++  M   G
Sbjct: 186 LRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDG 245

Query: 217 --VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
               P VV+Y  +I G+ K+G +GK Y    +F  M+++GI PN VT N++IDG CK + 
Sbjct: 246 DNCPPNVVSYTTVIHGFFKEGDVGKAY---TLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A  V ++M    I     TYNSLI+G    G+  EAV +  EM   G +PNVVT + 
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+  CK  L  +AR +F+ + + G  P+  TY +L+  Y  EG + D   +++ M+  G
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           + P    +N  I    + G ++      N++   G    +V Y  ++  LCK G+   A+
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           S   +M     +   P+I+T+N LI GF   GK E A  L  E++++G+ PN  T+  + 
Sbjct: 483 SRFCQMI---DDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMI 539

Query: 515 EEMMEKG 521
           +++ ++G
Sbjct: 540 DKLFKEG 546



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V+S   ++    KEG       ++ +M    I  N+ + N V++GLCK   ++KA  ++
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 310

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           + M    + P   TYN LI GY   G   +  +A  + K+M  +G  PN VT++ LID  
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSG---QWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK    + A ++F  M   G      TY SL++G   +G L +   ++D M+ +G++P  
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              N  I  +CK   +++A + F+ + +QG  P ++ Y T+ID  CK GR++DA +    
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+D G+ PD+ T+N LI G +  G  E    +  E+++ G+   + T+N ++  L K+GK
Sbjct: 488 MIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGK 547

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  L D    M +    PN+V+YN +I G+   G++ +   LL+++L  GL P   T
Sbjct: 548 VTEARKLFD---LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 604

Query: 510 YQIVREEMMEKGFIPDI 526
           +  + + M+  G  PD+
Sbjct: 605 FNTLLDGMVSMGLKPDV 621



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 191/358 (53%), Gaps = 25/358 (6%)

Query: 188 SFNFVLNGLCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           +F  +L  LC   + + A +I +  M  LG +P V +Y  L+ G C +    K  +A  +
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEK---KCEEAAEL 237

Query: 247 FKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              M E+G    PN V++ T+I GF K+ ++  A  +F +M  HGI   VVT NS+I+GL
Sbjct: 238 IHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 297

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C    +D+A A+  +M+   + PN  T N+LI+G+       +A  +  ++S  G  P+V
Sbjct: 298 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 357

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY+ LID  CK G   +A  + NSM+  G  P+ STY  L+ G + EGN+  + N+ + 
Sbjct: 358 VTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDL 417

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V NGMR G   +NI + A CK G+  +A    +   KM+++   P+IV Y  +I G C+
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFN---KMQQQGFMPDIVAYTTVIDGLCK 474

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
            G+L+DA     ++++ GL P+  T+  +                  EMM++G  P++
Sbjct: 475 IGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV 532



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 60/492 (12%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           +LR  C    E R S ++ +  R +  L          + L       K    + + H +
Sbjct: 185 LLRTLC---AEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM 241

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +   D+   N +    ++  + K       +  F +  D+G+  +V++CN ++  L K  
Sbjct: 242 AEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
             +  E V ++M    I  N  ++N +++G   +G+  +A  I+++M   G  P VVTY+
Sbjct: 302 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYS 361

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF---------------- 269
           +LID  CK G      +A  +F  M+++G  PN  T+ +L+ G+                
Sbjct: 362 MLIDCLCKSG---LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM 418

Query: 270 -------------------CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
                              CK   +  A   F +M   G    +V Y ++I+GLC  G+L
Sbjct: 419 VQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D+A++   +M+  GL P+++T N LI+GF      EKA  LF ++ ++G+ P+V T+N++
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID   KEG++ +A  + + M   G  P+V +YN +I G    G V  V  ++++++  G+
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +   VT+N                +LLD M  M  +   P++VT   LI   C+ G++ED
Sbjct: 599 KPTAVTFN----------------TLLDGMVSMGLK---PDVVTCKTLIDSCCEDGRIED 639

Query: 491 ANGLLNELLEKG 502
              L  E+L K 
Sbjct: 640 ILTLFREMLGKA 651



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 167/338 (49%), Gaps = 25/338 (7%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+P + T+ ILI   C  G +   +   A    +++ G+    VTF  L+   C ++  S
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGF---AALGQIIKTGLRAQAVTFTPLLRTLCAEKRTS 196

Query: 277 AAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSN 333
            AM  V   M   G    V +Y +L+ GLC + K +EA  L   M   G    PNVV+  
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I+GF K+  V KA  LF  + + G+ P+V+T N++ID  CK   M+ A A+   M+D 
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            ++P+ +TYN LI G    G       I+ E+  +G R  +VTY++L+  LCK G   +A
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
             + + M +  ++   PN  TY  L+ G+  +G L D N + + +++ G+ P +  + I 
Sbjct: 377 REIFNSMIQSGQK---PNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIE 433

Query: 513 ---------------VREEMMEKGFIPDIEGHMYNISG 535
                             +M ++GF+PDI  +   I G
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 164/346 (47%), Gaps = 24/346 (6%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H ++ +G++T    I   +S   D    N +   ML+    K+       E F    
Sbjct: 327 SLIHGYLSSGQWTEAVRILKEMS--RDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMI 384

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G K +  +   LL     EG   D+  V   M +  +      FN  +   CK G+L+
Sbjct: 385 QSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLD 444

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS     M+  G  P +V Y  +IDG CK   IG++  A + F  M+++G+ P+ +TFN
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVIDGLCK---IGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI GF        A ++F EM   GI   V T+NS+I+ L  +GK+ EA  L D M  +
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL------------- 370
           G KPNVV+ N +I+G+     V +   L DD+   GL P+ +T+NTL             
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDV 621

Query: 371 ------IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
                 ID+ C++GR+ED   +   ML +    D  T N  + G++
Sbjct: 622 VTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVT 667



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 19/204 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  D GL   +++ N L+      GK+E  E ++ EM  R I  N+++FN +++ L K
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFK 544

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK+ +A  + + M   G  P VV+YN +I GY   G +G++ K   +  DM+  G+ P 
Sbjct: 545 EGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK---LLDDMLLIGLKPT 601

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VTFNTL+DG                M S G+   VVT  +LI+  C DG++++ + L  
Sbjct: 602 AVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFR 645

Query: 319 EMMASGLKPNVVTSNALINGFCKK 342
           EM+    K + +T N  + G   K
Sbjct: 646 EMLGKADKTDTITENIKLRGVTVK 669



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 9/204 (4%)

Query: 313 AVALRDEMMASGLK---PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           AV++ + M  +G K   P++ T   LI+  C    +         I + GL    +T+  
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 370 LIDAYCKEGRMEDAF-AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           L+   C E R  DA   +   M + G  PDV +Y  L+ GL  E   E    +++ +  +
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 429 G--MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           G      +V+Y  ++    K+G   KA +L     KM      PN+VT N +I G C+  
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLF---CKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 487 KLEDANGLLNELLEKGLIPNQTTY 510
            ++ A  +L +++++ ++PN TTY
Sbjct: 302 AMDKAEAVLQQMIDEHIMPNCTTY 325


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 216/430 (50%), Gaps = 46/430 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI---ELNLDSFNFVLNG 195
            +R  + G     +S N LL+ L  E + E+   +   M   ++     N+ S++ V+NG
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY-KADAVFKDMVENG 254
               G+++K  ++  +M   G+ P VVTY  +IDG CK     +++ +A+AVF+ M++NG
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCK----AQLFDRAEAVFQQMIDNG 268

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN  T+N LI G+         +++ EEM + G      TY SL+N LC +G+  EA 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKK------------------------------- 343
              D M+  G+KP+V T   +++G+  K                                
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 344 ----LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
               +++KA  +F+ + +QGLSP  ++Y  LIDA CK GR++DA    N M++ GV PD+
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
             ++ L+ GL      E V  +  E++N G+   +V +N ++  LCK+G+  +   L+D 
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           +  M      P++++YN LI G C  G +++A+ LL  ++  GL P+  +Y  +     +
Sbjct: 509 IECMGVR---PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565

Query: 520 KGFIPDIEGH 529
            G I     H
Sbjct: 566 AGRIDSAYSH 575



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 208/430 (48%), Gaps = 10/430 (2%)

Query: 96  TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
           T VS     +  C   +  N     +L+  + +      GF AF      G +   +  N
Sbjct: 74  TVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVIN 133

Query: 156 QLLRALVKEGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI---MED 211
           QLL  L    +  E ++ + + M       +  S+N +L GLC   +  +A ++   M D
Sbjct: 134 QLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMAD 193

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
            +     P VV+Y+ +I+G+  +G + K Y    +F +M++ GI P+ VT+ T+IDG CK
Sbjct: 194 DQVWSCPPNVVSYSTVINGFFTEGQVDKPYN---LFLEMMDRGIPPDVVTYTTVIDGLCK 250

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            +    A  VF++M  +G+   + TYN LI+G    GK  E V + +EM A G KPN  T
Sbjct: 251 AQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCT 310

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
             +L+N  CK     +AR  FD +  +G+ PSV TY  ++  Y  +G + +   + N M+
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G+ P+   +N   +  ++ G ++   +I N++   G+    V+Y  L+ ALCK G+  
Sbjct: 371 ANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD 430

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A    ++M     E   P+IV ++ L+ G C   K E    L  E+L  G+ PN   + 
Sbjct: 431 DAEVKFNQMI---NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487

Query: 512 IVREEMMEKG 521
            +   + ++G
Sbjct: 488 TILCNLCKEG 497



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 211/411 (51%), Gaps = 34/411 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +  + G+   ++  + L+  L    K+E VE ++ EM    I  N+  FN +L  LCK
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 495

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +   +++ ++ +GV P V++YN LIDG+C  G I +   A  + + MV  G+ P+
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE---ASKLLEGMVSVGLKPD 552

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             ++NTL+ G+CK   I +A   F +M S+GI  GVVTYN++++GL    +  EA  L  
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+ SG K ++ T N ++NG CK   V++A  +F ++  +GL  ++IT+N +I A  K G
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R EDA  +  ++   G++ +V TY  ++  L  EG++E   ++ + +  NG        N
Sbjct: 673 RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 732

Query: 439 ILVGALCKDGKSKKA---VSLLDEM-FKME------------------------KEKKWP 470
            LV  L   G   +A   +S LDE  F +E                        K+ +  
Sbjct: 733 ALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 792

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           N    + LIK   +  +++DA  L  E+L KGL P+  TY  +   + + G
Sbjct: 793 NEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 840



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 200/410 (48%), Gaps = 35/410 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K SV +   +L     +G   ++  +   M    I  N   FN   +   K G ++KA
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKG------------------------------ 235
            DI   M+  G+SP  V+Y  LID  CK G                              
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 236 --GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
              + K  K + +F +M+  GI PN V FNT++   CK+  +    ++ + +   G+   
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V++YN+LI+G C+ G +DEA  L + M++ GLKP+  + N L++G+CK   ++ A   F 
Sbjct: 518 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFR 577

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +   G++P V+TYNT++    +  R  +A  +  +M++ G   D+ TYN ++ GL +  
Sbjct: 578 KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSN 637

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V+    +   L + G++  ++T+NI++GAL K G+ + A+ L      +       N+V
Sbjct: 638 CVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA---AIPANGLVQNVV 694

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           TY ++++   ++G LE+ + L + + + G  PN      +   ++ +G I
Sbjct: 695 TYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 220/494 (44%), Gaps = 112/494 (22%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F    + G+  +++  N +L  L KEG+  + + +   ++   +  ++ S+N +++G 
Sbjct: 469 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C AG +++AS ++E M S+G+ P   +YN L+ GYCK G I   Y     F+ M+ NGI 
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH---FRKMLSNGIT 585

Query: 257 PNEVTFNTLI-----------------------------------DGFCKDENISAAMKV 281
           P  VT+NT++                                   +G CK   +  A+K+
Sbjct: 586 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKM 645

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS--------- 332
           F+ + S G+   ++T+N +I  L   G+ ++A+ L   + A+GL  NVVT          
Sbjct: 646 FQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIE 705

Query: 333 --------------------------NALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
                                     NAL+     +  + +A      + E+  S    T
Sbjct: 706 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 765

Query: 367 YNTLIDAYC----------------------------KEGRMEDAFAMRNSMLDRGVLPD 398
            + LI  +                             K  R++DA+++   ML +G+ PD
Sbjct: 766 TSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPD 825

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V TYN ++ GL + G     + +   ++N+  +  + TYNI++  LCK        + +D
Sbjct: 826 VVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKS-------NCVD 878

Query: 459 EMFKMEK----EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           E FKM +    +    NI+T+N++I    + G+ EDA  L   +   GL+P+  TY++V 
Sbjct: 879 EAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVA 938

Query: 515 EEMMEKGFIPDIEG 528
           E ++E+G + + +G
Sbjct: 939 ENLIEEGSLEEFDG 952



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 211/439 (48%), Gaps = 38/439 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           +S   + L+  Y K  +    +  F++    G+   V++ N +L  L +  +F + + +Y
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 611

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M     + ++ ++N +LNGLCK+  +++A  + +++ S G+   ++T+NI+I G   K
Sbjct: 612 LNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMI-GALLK 670

Query: 235 GGIGKMYKADA--VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           GG     K DA  +F  +  NG++ N VT+  +++   ++ ++     +F  M  +G A 
Sbjct: 671 GG----RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK--------- 343
                N+L+  L   G +  A A   ++          T++ LI+ F   +         
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 344 -------------LVEKAR------VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
                        L++KAR       LF ++  +GL+P V+TYNT++    + GR  +A 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +  SM++     ++ TYN ++ GL +   V+    +   L + G++  ++T+NI++GAL
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G+ + A+ L      +      P++VTY ++ +   ++G LE+ +GL   + + G  
Sbjct: 907 LKGGRKEDAMDLFA---AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTP 963

Query: 505 PNQTTYQIVREEMMEKGFI 523
            +      +   ++++G I
Sbjct: 964 LDSRLLNALVRRLLQRGDI 982



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 13/355 (3%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           CS  L  N I  ++++ A +K  +     + F      GL  +V++   ++  L++EG  
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           E+ + ++  M++     N    N ++  L   G +++A   +  +     S +  T ++L
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I  +         Y+  A  K + +   + NE   + LI    K   I  A  +F EM  
Sbjct: 770 ISIFSSDE-----YQHHA--KSLPKKYRILNEANSSALIK---KARRIDDAYSLFREMLM 819

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   VVTYN++++GL   G+  EA  L   M+ S  + N+ T N ++NG CK   V++
Sbjct: 820 KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDE 879

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +F  +  +GL  ++IT+N +I A  K GR EDA  +  ++   G++PDV TY  +  
Sbjct: 880 AFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE 939

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
            L  EG++E    +   +  +G        N LV  L + G   +A   +S LDE
Sbjct: 940 NLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDE 994



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 130/334 (38%), Gaps = 87/334 (26%)

Query: 278 AMKVFEEMGSHGIAAGVV------------------------------------------ 295
           A+K+F+E+  H   A VV                                          
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 296 ---TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV-EKARVL 351
              TY+ LI   C  G L+   A    ++ +G + + +  N L+NG C  K V E   VL
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN----------------------- 388
              + E G  P  ++YN L+   C E R E+A  + +                       
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 389 ---------------SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
                           M+DRG+ PDV TY  +I GL +    +    +  ++++NG++  
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           + TYN L+      GK K+ V +L+E   M      PN  TY  L+   C+ G+  +A  
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEE---MSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             + ++ KG+ P+ TTY I+      KG + ++ 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMH 363



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 28/155 (18%)

Query: 405 LIAGLSREGNVE--GVRNIMNELVNNGMRAGLVTYNILVGALCKDG-------KSKKAVS 455
           +IA  +R G++       + +EL+ +   A +V +N L+ A+ +         +S+  VS
Sbjct: 18  VIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVS 77

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-----LIPNQ--- 507
           L + M +    K  PN  TY++LI  FC+ G LE        +L+ G     ++ NQ   
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 508 ---------TTYQIVREEMMEKGFIPDIEGHMYNI 533
                        ++ + M E G +PD     YNI
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVS--YNI 170


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 217/416 (52%), Gaps = 11/416 (2%)

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           T SD+   N+  +  L+ A+  + +   G+E   +    GL     + N+L+    +   
Sbjct: 222 TASDA---NTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKN 278

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           +  +  V   M  R     + ++  ++NGLCK  +  +A  +  D+K  G +P  V Y  
Sbjct: 279 YASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTT 338

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +I G C+ G  G+  K   ++ +M++ G+ PN  T+NT++ G  K  +   A +++ EM 
Sbjct: 339 MIHGLCEMGSFGEARK---LWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC 395

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           + G     VT N +I+ LC  GK DEA  +  +M  +G++ + +T N+LI GFCK+  V+
Sbjct: 396 NKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVD 455

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +   L +++  Q   PSV  Y  LI   CK+G  E A  +   M  +G+ P+  TY+ ++
Sbjct: 456 ERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTML 515

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEK 465
            G  + G+ E VR + NE  N G      T N ++  LC  GKS +A     EMF KM +
Sbjct: 516 HGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEA----SEMFKKMSE 571

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                + +TYN LI+GFC++GK+  +  LLNEL+ +GL P+ ++Y  +  ++ + G
Sbjct: 572 TGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNG 627



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 192/389 (49%), Gaps = 8/389 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI--ELNLDSFNFV 192
             E + +  + G++ S+++CN +L   +K GK E +   Y+EM +     + N ++   +
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCL 234

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +   C +G++ +  +++      G+ P   TYN LI G+C+      M +   V   M+ 
Sbjct: 235 IQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSE---VLHTMIA 291

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
              LP   T+  +I+G CK+E    A +VF ++   G A   V Y ++I+GLC  G   E
Sbjct: 292 RNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  EMM  G++PN  T N +++G  K    E+A  L++++  +G   + +T N +I 
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIIS 411

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  G+ ++AF +   M + G+  D  TYN LI G  +EG V+   N++NELV    + 
Sbjct: 412 ELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQP 471

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +  Y +L+   CKDG  + A  LL +   M  +   PN  TY+ ++ G  + G  E   
Sbjct: 472 SVSLYELLIIKSCKDGDFEAAKRLLGD---MSSKGLHPNAYTYDTMLHGSLKSGDFEHVR 528

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            L NE   KG      T   +  E+  +G
Sbjct: 529 ELYNETCNKGYGTTTATCNKIISELCSRG 557



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 206/452 (45%), Gaps = 24/452 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           +L+     AK Y  +   LH  +      ++ T    +    + LC+N   ++       
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEII----NGLCKNEECLE------- 316

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
                   +  F    D G     +    ++  L + G F +   ++ EM  + ++ N  
Sbjct: 317 -------AYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAY 369

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++N +L+G  K+G   +A ++  +M + G     VT N +I   C +G   K  +A  VF
Sbjct: 370 TYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRG---KSDEAFEVF 426

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M E GI  + +T+N+LI GFCK+  +   M +  E+ +      V  Y  LI   C D
Sbjct: 427 KKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKD 486

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G  + A  L  +M + GL PN  T + +++G  K    E  R L+++   +G   +  T 
Sbjct: 487 GDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC 546

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +I   C  G+ ++A  M   M + G+  D  TYN LI G  +EG V    N++NELV 
Sbjct: 547 NKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVA 606

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++    +Y  L+  LC++G ++ A  L  +M     E   P+      LI G C++G+
Sbjct: 607 QGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIE---PHANLREHLISGLCKQGR 663

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
             +    L  +LE  + P +  ++ + E +++
Sbjct: 664 ATEGMDRLMGMLENKIKPKKAAFEDLAECLIQ 695



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 83/369 (22%)

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           +P  ++ N+L +         K  +A  + +D+   G +P+  +    +   C    I  
Sbjct: 121 TPDPISSNMLFEALLD----AKAVRAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEE 174

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLING---------------------------------- 303
           A++V+ ++   GI   +V  NS+++G                                  
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCL 234

Query: 304 ---LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK----------------- 343
               C  G++     L ++ + +GL P   T N LI GFC+ K                 
Sbjct: 235 IQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNH 294

Query: 344 -------------------LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
                               +E  RV F+D+ ++G +P  + Y T+I   C+ G   +A 
Sbjct: 295 LPTIYTYQEIINGLCKNEECLEAYRV-FNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M+D+G+ P+  TYN ++ G  + G+ E    + NE+ N G     VT N ++  L
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  GKS +A  +     KM +     + +TYN LI+GFC++GK+++   LLNEL+ +   
Sbjct: 414 CSRGKSDEAFEVFK---KMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQ 470

Query: 505 PNQTTYQIV 513
           P+ + Y+++
Sbjct: 471 PSVSLYELL 479


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 222/440 (50%), Gaps = 17/440 (3%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           P + S+   L+ F K G      + +H +       D +  +SII      A  K     
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA-----ALCKAQAMD 253

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              E        G+    ++ N +L      G+ ++     K+M+   +E N+ +++ ++
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           N LCK G+  +A  I + M   G+ P + TY  L+ GY  KG + +M+   A+   MV N
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH---ALLDLMVRN 370

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+   FN LI  + K E +  AM VF +M  HG+   VV Y ++I+ LC  G +D+A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +   ++M+  GL PN++   +LI+G C     +KA  L  ++ ++G+  + I +N++ID+
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +CKEGR+ ++  + + M+  GV PD+ TYN LI G    G ++    ++  +V+ G++  
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +VTY  L+   C+  +   A++L  EM         PNI+TYN++++G     +   A  
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMV---SSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L   + + G     +TY I+
Sbjct: 608 LYVSITKSGTQLELSTYNII 627



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 232/478 (48%), Gaps = 27/478 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTC--------------SDS 111
           ++ +L  A+   K    L+  VKNG      T   I H   +               SD 
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  N +    LM    KN +     + F      GL+  + +   LL+    +G   ++ 
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +   M R  I+ +   FN ++    K  K+++A  +   M+  G++P VV Y  +ID  
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G +     A   F+ M++ G+ PN + + +LI G C  +    A ++  EM   GI 
Sbjct: 422 CKSGSVDD---AMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              + +NS+I+  C +G++ E+  L D M+  G+KP+++T N LI+G C    +++A  L
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              +   G+ P ++TY TLI+ YC+  RM+DA A+   M+  GV P++ TYN ++ GL  
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE--MFKMEKEKKW 469
                  + +   +  +G +  L TYNI++  LCK+  + +A+ +     +  ++ E + 
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR- 657

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
               T+N++I    + G++++A  L       GL+P+  TY ++ E ++E+G + +++
Sbjct: 658 ----TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 229/459 (49%), Gaps = 26/459 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-----LMLAYVKN---MKPHLG 135
           S ++   KNG+ T    IF       DS+ +  +  D+     L+  Y      ++ H  
Sbjct: 311 SLMNYLCKNGRSTEARKIF-------DSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
            +   R G   ++      N L+ A  K+ K +    V+ +M++  +  N+  +  V++ 
Sbjct: 364 LDLMVRNG---IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCK+G ++ A    E M   G++P ++ Y  LI G C      K  KA+ +  +M++ GI
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT---CDKWDKAEELILEMLDRGI 477

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N + FN++ID  CK+  +  + K+F+ M   G+   ++TYN+LI+G C+ GK+DEA  
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L   M++ G+KP++VT   LING+C+   ++ A  LF ++   G+SP++ITYN ++    
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
              R   A  +  S+   G   ++STYN ++ GL +    +    +   L    ++    
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGL 494
           T+NI++GAL K G+  +A     ++F         P++ TY+++ +   ++G LE+ + L
Sbjct: 658 TFNIMIGALLKCGRMDEA----KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
              + E G   +      +  +++++G I     +++ I
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 752



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 197/376 (52%), Gaps = 4/376 (1%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           +    RAG   +  +V +   L+    + G+ +        + ++   ++  +F  +L G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 196 LCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LC   + + A DI +  M  LG  P V +YN L+ G C +    +  +   +  D    G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NT+++GF K+ +   A   + EM   GI   VVTY+S+I  LC    +D+A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            + + M+ +G+ P+ +T N++++G+C     ++A      +   G+ P+V+TY++L++  
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK GR  +A  + +SM  RG+ PD++TY  L+ G + +G +  +  +++ +V NG++   
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             +NIL+ A  K  K  +A+ +     KM +    PN+V Y  +I   C+ G ++DA   
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFS---KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 495 LNELLEKGLIPNQTTY 510
             +++++GL PN   Y
Sbjct: 434 FEQMIDEGLTPNIIVY 449



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 213/425 (50%), Gaps = 20/425 (4%)

Query: 83  RSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI-----IIDMLMLAYVKNMKPHLGFE 137
           R+ L  +   G    +    HAL    D + RN I     + ++L+ AY K  K      
Sbjct: 345 RTLLQGYATKGALVEM----HALL---DLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F +   +GL  +V+    ++  L K G  +D    +++M    +  N+  +  +++GLC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
              K +KA +++ +M   G+    + +N +ID +CK+G   ++ +++ +F  MV  G+ P
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG---RVIESEKLFDLMVRIGVKP 514

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +T+NTLIDG C    +  A K+   M S G+   +VTY +LING C   ++D+A+AL 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            EM++SG+ PN++T N ++ G    +    A+ L+  I++ G    + TYN ++   CK 
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
              ++A  M  ++    +  +  T+N +I  L + G ++  +++      NG+   + TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 438 NILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           +++   L + G  ++    LD++F  ME+     +    N +++   Q+G +  A   L 
Sbjct: 695 SLMAENLIEQGSLEE----LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLF 750

Query: 497 ELLEK 501
            + EK
Sbjct: 751 MIDEK 755



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 1/155 (0%)

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           ++P+V TY  LI   C+ GR++  FA   +++ +G   D  T+  L+ GL  +       
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 420 NI-MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           +I +  +   G    + +YN L+  LC + +S++A+ LL  M         P++V+YN +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + GF ++G  + A    +E+L++G++P+  TY  +
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/321 (18%), Positives = 132/321 (41%), Gaps = 46/321 (14%)

Query: 99  STIFHALSTCSD--------------SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           +++ H L TC                 +C N+I  + ++ ++ K  +     + F     
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K  +++ N L+      GK ++   +   M    ++ ++ ++  ++NG C+  +++ 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDG--YCKKGGIGK-MY-------------------- 241
           A  + ++M S GVSP ++TYNI++ G  + ++    K +Y                    
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629

Query: 242 ---------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
                    +A  +F+++    +     TFN +I    K   +  A  +F    ++G+  
Sbjct: 630 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 689

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            V TY+ +   L   G L+E   L   M  +G   +    N+++    ++  + +A    
Sbjct: 690 DVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749

Query: 353 DDISEQGLSPSVITYNTLIDA 373
             I E+  S    T + L+++
Sbjct: 750 FMIDEKHFSLEASTASFLLES 770



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E  R++ +EL+  G  A +   N  +  + +   +  AVS  + M +    K  P + TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTY 95

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMM 518
            +LI   C+ G+L+     L  +++KG   +  T+                  IV   M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 519 EKGFIPDI 526
           E G IPD+
Sbjct: 156 ELGCIPDV 163


>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           javanica]
          Length = 431

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 221/435 (50%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   + + + +S + + V      S S +F A+ 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+ AY+++       E ++   ++ L     +C ++L  L+K   
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRY 122

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V   Y+E+       +L  FN +++  CK G +  A  + + +   G+ P V +YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNT 182

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M  +G+ P+  T++ LI+G  K+  +    ++F+EM 
Sbjct: 183 LMNGYIRLGXLDEGFRLKSA---MXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEML 239

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+ +T N L  G CKK  + 
Sbjct: 240 XKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLN 299

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 300 QAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALI 359

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K    L E   M++ 
Sbjct: 360 SGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKE---MQRN 416

Query: 467 KKWPNIVTYNVLIKG 481
              P +VTYNVL+ G
Sbjct: 417 GHVPXVVTYNVLMNG 431



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 154/281 (54%), Gaps = 11/281 (3%)

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
             +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   V +YN+L+NG 
Sbjct: 128 GFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGY 187

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G LDE   L+  M ASG++P+V T + LING  K+  ++    LFD++  +GL P+ 
Sbjct: 188 IRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNS 247

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+ TLID +CK GR++ A  +   ML + + PD  TYN L  GL ++G++     +++E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDE 307

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIK 480
           +   G++    TY  L+   CK+G        LD  F+  K     NI    V Y  LI 
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGD-------LDAAFEHRKRMIQENIXLDDVAYTALIS 360

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 361 GLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKG 401



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 6/366 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  ++ +  D+   VL  L K         
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 128

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P   ++NTL++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRV---AQSVFDAITKWGLRPXVXSYNTLMN 185

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +   +    ++   M + G+   V TY+ LINGL  +  +D+   L DEM+  GL P
Sbjct: 186 GYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVP 245

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P  ITYNTL    CK+G +  A  + 
Sbjct: 246 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLI 305

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +    V Y  L+  LC++
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQE 365

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +      L E+   G +P  
Sbjct: 366 GRSXDAEKMLREMLSVGLK---PDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXV 422

Query: 508 TTYQIV 513
            TY ++
Sbjct: 423 VTYNVL 428



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H +     T   +
Sbjct: 54  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E++  G   ++   N L++ FCK   +  A+ +FD I++ GL
Sbjct: 114 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P V +YNTL++ Y + G +++ F ++++M   GV PDV TY+ LI GL +    E   +
Sbjct: 174 RPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXK----ESXMD 229

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
             NEL +  +  GLV                                  PN VT+  LI 
Sbjct: 230 DXNELFDEMLXKGLV----------------------------------PNSVTFTTLID 255

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           G C+ G+++ A  +  ++L + L P+  TY  +   + +KG +    G
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHG 303


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 219/425 (51%), Gaps = 35/425 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             + F    D G+  + ++ N ++   VK G  E    +  +M     + N+ ++N +L+
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI-- 237
           GLC+ G++++   +M++M S  + P   TY+IL DG  + G               G+  
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GK+ KA  VF+ +V  G++P  V +NTLI+G+C+  ++  A  +F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E+M S  I    +TYN+LINGLC    + +A  L  EM  SG+ P+V T N LI+ +   
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +EK   +  D+ ++G+   VI++ +++ A+CK G++ +A A+ + M+ + V P+   Y
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +I      G+ E    ++ ++ N+G+ A +VTYN+L+  LC+  +  +A  L+   + 
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI---YT 569

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           +  +   P++V+YN +I   C KG  + A  LL E+ + G+ P   T   +   +   G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 523 IPDIE 527
           + D+E
Sbjct: 630 VHDME 634



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 206/409 (50%), Gaps = 43/409 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+ SCN LL +L+  G+  DV   +  +       +  ++N V+     AG L+ A  ++
Sbjct: 121 SLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAML 180

Query: 210 EDM-KSLGVSPK-VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             M +S G  P    +YN++I G  + G   K   A  VF +MV+ G+ PN +T+NT+ID
Sbjct: 181 RRMGRSEGAPPPDAFSYNVVIAGLWRSG---KGSDALKVFDEMVDMGVAPNRITYNTMID 237

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G  K  ++ A  ++ ++M   G    VVTYN L++GLC  G++DE  AL DEM +  + P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP 297

Query: 328 N-----------------------------------VVTSNALINGFCKKKLVEKARVLF 352
           +                                     T + L+NG CK   V KA+ +F
Sbjct: 298 DGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF 357

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + +   GL P+ + YNTLI+ YC+   +  AF +   M  R + PD  TYN LI GL + 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             V    +++ E+  +G+   + T+N L+ A    G+ +K  ++L +   M+++    ++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD---MQQKGIKSDV 474

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +++  ++K FC+ GK+ +A  +L++++ K + PN   Y  + +  +E G
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 523



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 195/383 (50%), Gaps = 6/383 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             S N ++  L + GK  D   V+ EM    +  N  ++N +++G  K G L     + +
Sbjct: 194 AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRD 253

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G  P VVTYN+L+ G C+    G+M +  A+  +M  + +LP+  T++ L DG  
Sbjct: 254 QMLHDGPKPNVVTYNVLLSGLCR---TGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +       + +F E    G+  G  T + L+NGLC DGK+ +A  + + ++ +GL P  V
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N LING+C+ + +  A  +F+ +  + + P  ITYN LI+  CK   +  A  +   M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              GV P V T+N LI      G +E    +++++   G+++ ++++  +V A CK+GK 
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +AV++LD+M   +     PN   YN +I  + + G  E A  L+ ++   G+  +  TY
Sbjct: 491 PEAVAILDDMIYKDVA---PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTY 547

Query: 511 QIVREEMMEKGFIPDIEGHMYNI 533
            ++ + +     I + E  +Y +
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTL 570



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 187/363 (51%), Gaps = 6/363 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+     +C+ LL  L K+GK    + V++ +    +      +N ++NG C+   L  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I E MKS  + P  +TYN LI+G CK   +  + KA+ +  +M ++G+ P+  TFNTL
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCK---LEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID +     +     V  +M   GI + V+++ S++   C +GK+ EAVA+ D+M+   +
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN    N++I+ + +    E+A +L + +   G+S S++TYN L+   C+  ++++A  
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  ++ ++G+ PDV +YN +I+    +G+ +    ++ E+   G+R  L T + LV AL 
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALA 625

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
             G+      L  +M     E   P+   Y +++  + +         L  E+ EKG+  
Sbjct: 626 SAGRVHDMECLYQQMLHKNVE---PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 682

Query: 506 NQT 508
           + T
Sbjct: 683 DDT 685



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 175/346 (50%), Gaps = 5/346 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+   K+GK      +F  L      L   ++I + L+  Y +       F  F++   
Sbjct: 340 LLNGLCKDGKVAKAKQVFEML--VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
             ++   ++ N L+  L K       E +  EM++  ++ ++++FN +++    AG+L K
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++ DM+  G+   V+++  ++  +CK    GK+ +A A+  DM+   + PN   +N+
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKN---GKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID + +  +   A+ + E+M + G++A +VTYN L+ GLC   ++DEA  L   +   G
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L+P+VV+ N +I+  C K   +KA  L  ++++ G+ P++ T +TL+ A    GR+ D  
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            +   ML + V P  S Y  ++    R  N   V ++  E+   G+
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 5/178 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           PS+ + N L+++    GR  D  A    ++  G  PD   +N ++      G+++    +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 422 MNEL--VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +  +            +YN+++  L + GK   A+ + DEM  M      PN +TYN +I
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM---GVAPNRITYNTMI 236

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            G  + G LE    L +++L  G  PN  TY ++   +   G + +    M  ++  S
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/84 (19%), Positives = 44/84 (52%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +    YG++ ++ +C+ L+ AL   G+  D+E +Y++M  + +E +   +  +++
Sbjct: 598 ALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657

Query: 195 GLCKAGKLNKASDIMEDMKSLGVS 218
              +    +K + + ++M   G++
Sbjct: 658 AYVRCENDSKVASLKKEMSEKGIA 681


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 203/387 (52%), Gaps = 22/387 (5%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LLR+L +  +FE+   V++ M  +    N+ S++ ++ GLC+  K+++A++++ +M   G
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P VVTY  L+ G CK   +GK+ +A  +F  MV  G  P+ V +N LIDGF K  ++ 
Sbjct: 118 HQPNVVTYGSLLSGLCK---MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++FEEM   G    V TYNSL++G    G+     +L  +M+  G  PN+ T N L+
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +GFCK   + +A  LF ++   G  P V++YNTL+   C +G+  +A  +   M+  GV 
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN LI G S+ G ++    +  E+  +G+     +Y+ ++  LC+ GK   A  +
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP-----NQTTYQ 511
             +M         P+      L+ G C+  +L ++  L   +++   +P     N   Y+
Sbjct: 355 FKDMI---ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411

Query: 512 IVR-----------EEMMEKGFIPDIE 527
           + +            E+ E+GF PD+E
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVE 438



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 185/359 (51%), Gaps = 6/359 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            LS N LL  L K G+ + V   Y +M       N  ++ ++L  LC+A +  +A  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M + G SP V +Y+ILI G C+     K+ +A  +  +M++ G  PN VT+ +L+ G C
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRG---QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   +  A+ +F  M   G     V YN LI+G    G + EA  L +EM+  G  P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+L++GF +K    + + LF D+  QG  P++ T+N L+D +CK G M +A  +   M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  PDV +YN L+ G+  +G     + ++ E++ +G+   +V+YNIL+    K G  
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             A+ L  E+ K   E   P+  +Y+ +I   C+ GK+  A  +  +++  G  P+   
Sbjct: 314 DHAIKLFYEIPKSGLE---PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 163/293 (55%), Gaps = 6/293 (2%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
            ++YN L++   K G    +Y     + DM+  G +PN  T+  L+   C+ +    A  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVY---GTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           VF  M + G +  V +Y+ LI GLC   K+DEA  L +EM+  G +PNVVT  +L++G C
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +++A  LF  +  +G  P  + YN LID + K+G M +A+ +   ML++G +P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN L++G SR+G    V+++  +++  G    + T+N L+   CK G   +A  L  EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             +      P++V+YN L++G C KGK  +A  LL E++  G+ P+  +Y I+
Sbjct: 254 RSLGCP---PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 168/385 (43%), Gaps = 28/385 (7%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR------------ 114
           G LL SL  A+++ + RS        G     S    + S     LCR            
Sbjct: 56  GYLLRSLCQAQRFEEARSVFRGMAAQG----CSPNVFSYSILIAGLCRGQKVDEAAELLN 111

Query: 115 ---------NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
                    N +    L+    K  K     + F R    G     +  N L+    K+G
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
              +   +++EM  +     + ++N +L+G  + G+  +   + +DM   G  P + T+N
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L+DG+CK   +G M +A  +F +M   G  P+ V++NTL+ G C       A ++  EM
Sbjct: 232 NLLDGFCK---MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+   +V+YN LI+G    G LD A+ L  E+  SGL+P+  + + +I+  C+   V
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
             A V+F D+   G +P       L+   C+  R+ ++  +  +M+    +P +  YN L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 406 IAGLSREGNVEGVRNIMNELVNNGM 430
           +  L +    + V  I +EL   G 
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTERGF 433



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 4/233 (1%)

Query: 279 MKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           M  F+  GS      G ++YN L+  L   G+ D      ++M+ +G  PN  T   L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             C+ +  E+AR +F  ++ QG SP+V +Y+ LI   C+  ++++A  + N M+D G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +V TY  L++GL + G ++   ++ + +V  G     V YN+L+    K G   +A  L 
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +EM    ++   P + TYN L+ GF +KG+      L  ++L +G +PN  T+
Sbjct: 181 EEML---EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
             ++ N L+    K    +     ++D+   G  P+  TY  L+ + C+  R E+A ++ 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M  +G  P+V +Y+ LIAGL R   V+    ++NE+++ G +  +VTY  L+  LCK 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           GK K+AV L     +M      P+ V YNVLI GF +KG + +A  L             
Sbjct: 136 GKLKEAVDLFS---RMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF------------ 180

Query: 508 TTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
                  EEM+EKG IP +  +   +SG S
Sbjct: 181 -------EEMLEKGCIPTVFTYNSLLSGFS 203


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 236/456 (51%), Gaps = 24/456 (5%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           ++L SLV  K+YP   S      K  + + V   +  L+   +  C    ++        
Sbjct: 63  KILISLVNVKRYPTAISLY----KQMELSEVEPDYFTLNIIINCFCHFGQVV-------- 110

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
                 L F    +    G + + ++ N L++ L  EGK ++    + ++  +   L+  
Sbjct: 111 ------LAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGI 164

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+  ++NG+CK G+   A  ++  ++   + P VV Y+++ID  CK   + + Y    ++
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD---LY 221

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +MV  GI P+ VT++ L+ GFC    ++ A+ +  EM    I   + TY  L++ LC +
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK+ EA  +   M+ + +  +VV  + L++G+C    V  A+ +F  +++ G++P V  Y
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           + +I+  CK  R+++A  +   +  + ++PD  TY  LI  L + G +  V ++ +E+++
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    ++TYN L+ ALCK+G   +A++L +   KM+ +   PN+ T+ +L+ G C+ G+
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFN---KMKDQAIRPNVYTFTILLDGLCKVGR 458

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           L++A     +LL KG   N  TY ++   + ++G +
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLL 494



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 207/366 (56%), Gaps = 6/366 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            +R   + ++ +V+  + ++  L K+   ++   +Y EM  + I  ++ +++ +++G C 
Sbjct: 186 LRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCI 245

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+LN+A D++ +M    ++P + TY IL+D  CK+G   K+ +A+ V   MV+  +  +
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG---KVKEAENVLAVMVKACVNLD 302

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V ++TL+DG+C    ++ A +VF  M   G+   V  Y+ +INGLC   ++DEA+ L +
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           E+    + P+ VT  +LI+  CK   +     LFD++ ++G  P VITYN LIDA CK G
Sbjct: 363 EIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNG 422

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ++ A A+ N M D+ + P+V T+  L+ GL + G ++       +L+  G    + TY 
Sbjct: 423 HLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++  LCK+G   +A++L     +ME      + VT+ ++I+ F  K + + A  L+ E+
Sbjct: 483 VMINGLCKEGLLDEALALQS---RMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539

Query: 499 LEKGLI 504
           + +GL+
Sbjct: 540 IARGLL 545



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 179/354 (50%), Gaps = 22/354 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +L  L    +   A  + + M+   V P   T NI+I+ +C     G++  A +   
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH---FGQVVLAFSGVS 117

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            +++ G  PN +T NTL+ G C +  +  A++  +++ + G     ++Y  LING+C  G
Sbjct: 118 KILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG 177

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +   A+ L   +    ++PNVV  + +I+  CK  LV++A  L+ ++  +G+SP V+TY+
Sbjct: 178 ETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYS 237

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            L+  +C  G++  A  + N M+   + PD+ TY  L+  L +EG V+   N++  +V  
Sbjct: 238 ILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKA 297

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +   +V Y+ L+   C   +   A  +    + M +    P++  Y+++I G C+  ++
Sbjct: 298 CVNLDVVVYSTLMDGYCLVNEVNNAKRVF---YTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           ++A  L  E+ +K ++P+  TY                  + +EM+++G  PD+
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDV 408



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 21/310 (6%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DAV  F  M      P+   FN ++      +    A+ ++++M    +     T N +I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C  G++  A +   +++  G +PN +T N L+ G C +  V++A    D +  QG  
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
            S I+Y  LI+  CK G    A  +   +    + P+V  Y+ +I  L ++  V+   ++
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             E+V  G+   +VTY+ILV   C  G+  +A+ LL+EM     E   P+I TY +L+  
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV---LENINPDIYTYTILVDA 277

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPD 525
            C++GK+++A  +L  +++  +  +   Y  + +                 M + G  PD
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337

Query: 526 IEGHMYNISG 535
           +  +   I+G
Sbjct: 338 VHCYSIMING 347



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D+AV+  + M      P+    N ++      K    A  L+  +    + P   T N +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ +C  G++  AF+  + +L  G  P+  T N L+ GL  EG V+      ++++  G 
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           R   ++Y IL+  +CK G+++ A+ LL    ++E+    PN+V Y+++I   C+   +++
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLR---RIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 491 ANGLLNELLEKGLIPNQTTYQIV 513
           A  L  E++ KG+ P+  TY I+
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSIL 239



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           ++ F    D G    V++ N L+ AL K G  +    ++ +MK + I  N+ +F  +L+G
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCK G+L  A +  +D+ + G    V TY ++I+G CK+G +    +A A+   M +NG 
Sbjct: 453 LCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD---EALALQSRMEDNGC 509

Query: 256 LPNEVTFNTLIDGFC-KDENISAAMKVFEEMGSHGI 290
           + + VTF  +I  F  KDEN   A K+  EM + G+
Sbjct: 510 ISDAVTFEIMIRAFFDKDEN-DKAEKLVREMIARGL 544


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 197/360 (54%), Gaps = 16/360 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL+ L    + E+     + M  R  ELN+  FN V+      GKL +A+++ E M S G
Sbjct: 283 LLKGLCLASQVEEA----RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKG 338

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD---E 273
             P   TY+ILI G CK G +G   K   + ++M + G  P+ VT+  L+  FC++   +
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMK---LLREMEDKGFAPSIVTYTILLHSFCRNGMWD 395

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           NI A ++V   M   G++  +  YN +I  +C D ++D+A+    EM + G KP++ T N
Sbjct: 396 NIRAMLEV---MSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYN 452

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I   C    +E+A  LF+++  +G+  + ITYNTLI A  + G  +DA ++ N M+  
Sbjct: 453 TIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLH 512

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G   D+ +YN LI  L R+GNV+    +++E+   G++   V+YN+L+  LCK  + + A
Sbjct: 513 GCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDA 572

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + L  EM   E     P+IVTYN LI G C+ G +  A  LL +L  + +  +  TY I+
Sbjct: 573 LELSKEMLNQELT---PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNIL 629



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 230/497 (46%), Gaps = 32/497 (6%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           + L    +L L  +L H   V+  +    + L  F +    T V +++  +    D +  
Sbjct: 112 RSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVH-RDRVPP 170

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            +    +   A  +  +        +    +G     +    ++ AL  +G   +   + 
Sbjct: 171 TTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLL 230

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM       ++++FN +++GLC  G+L +A+ +++ M   G  P  +TY  L+ G C  
Sbjct: 231 DEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLA 290

Query: 235 GGI----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
             +                            GK+ +A  +++ M   G  P+  T++ LI
Sbjct: 291 SQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILI 350

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G CK   + +AMK+  EM   G A  +VTY  L++  C +G  D   A+ + M   GL 
Sbjct: 351 HGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLS 410

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            N+   N +I   CK + ++ A     ++  QG  P + TYNT+I   C   +ME+A  +
Sbjct: 411 MNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYL 470

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
             ++L  GV+ +  TYN LI  L R G+ +   ++ N++V +G    +V+YN L+ ALC+
Sbjct: 471 FENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCR 530

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           DG   +++ LL EM   EK  K PN V+YN+LI   C+  ++ DA  L  E+L + L P+
Sbjct: 531 DGNVDRSIMLLSEM--AEKGIK-PNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPD 587

Query: 507 QTTYQIVREEMMEKGFI 523
             TY  +   + + G++
Sbjct: 588 IVTYNTLINGLCKMGWM 604



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 182/354 (51%), Gaps = 35/354 (9%)

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           +GK ++   +Y+ M  +    +  +++ +++GLCK G+L  A  ++ +M+  G +P +VT
Sbjct: 321 DGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVT 380

Query: 224 YNILIDGYCKKG---------------GIG-----------------KMYKADAVFKDMV 251
           Y IL+  +C+ G               G+                  +M  A    ++M 
Sbjct: 381 YTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMK 440

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
             G  P+  T+NT+I   C +  +  A  +FE +   G+ A  +TYN+LI+ L  +G   
Sbjct: 441 SQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQ 500

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A++L ++M+  G   ++V+ N LI   C+   V+++ +L  +++E+G+ P+ ++YN LI
Sbjct: 501 DAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLI 560

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              CK  R+ DA  +   ML++ + PD+ TYN LI GL + G +    N++ +L N  + 
Sbjct: 561 SELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVH 620

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           A ++TYNIL+   CK      A  LL+   +       PN  T+ ++++ F +K
Sbjct: 621 ADIITYNILISWHCKARLLHDASMLLN---RAVTSGITPNERTWGIMVQNFVRK 671



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 8/276 (2%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDE 312
            + P+  ++NT++  F + +  +  + ++  M     +     T++     LC  G+ DE
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ +   M   G  P+ V    +I+  C +  V +A  L D++   G S  V T+N ++ 
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  GR+ +A  + + M+ RG +P+  TY  L+ GL     VE  R ++  +       
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPE----L 306

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +V +N ++G    DGK K+A  L +    M  +   P+  TY++LI G C+ G+L  A 
Sbjct: 307 NVVLFNTVIGRCLLDGKLKEAAELYE---TMGSKGCPPDAHTYSILIHGLCKLGRLGSAM 363

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            LL E+ +KG  P+  TY I+       G   +I  
Sbjct: 364 KLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 34/199 (17%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH--ALSTCS----------DSLCR-- 114
           LLH  VVA       + +H  ++NG +    ++ +   L  CS           +LCR  
Sbjct: 474 LLHEGVVANAI-TYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDG 532

Query: 115 -------------------NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCN 155
                              N++  ++L+    K  +     E  K   +  L   +++ N
Sbjct: 533 NVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYN 592

Query: 156 QLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
            L+  L K G       + +++    +  ++ ++N +++  CKA  L+ AS ++    + 
Sbjct: 593 TLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTS 652

Query: 216 GVSPKVVTYNILIDGYCKK 234
           G++P   T+ I++  + +K
Sbjct: 653 GITPNERTWGIMVQNFVRK 671


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 190/362 (52%), Gaps = 42/362 (11%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M  R   L+   +N ++ GLCKA K   A +++  M + G    VVTY  LIDG CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
           +     A A+ + M + G  PN VT+  LIDG CK      A++  + M   G    +VT
Sbjct: 61  LD---AAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVT 117

Query: 297 YNSLINGLCVDGKLDEA-VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           YNSLI+GLC+  ++D+A + L++ M+ SG  P+VVT N  I+G CK   ++K   + +++
Sbjct: 118 YNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              G+SP V+T+ ++I   CK  R++DAF +   ML+RG +PD  TY+ ++  LSR   +
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 237

Query: 416 EGVRNIMNELVNNG-------------------------------MRAGLV----TYNIL 440
           + V  ++  +V +G                               M AG V    T+N  
Sbjct: 238 DTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAF 297

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +GALC+ GK   A ++L     M +    PN+++YN +I G C+ G ++DA  L  ++L+
Sbjct: 298 IGALCRSGKFPLAKNIL---LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 354

Query: 501 KG 502
            G
Sbjct: 355 SG 356



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 199/398 (50%), Gaps = 7/398 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++ I + L+    K  KP    E        G  +SV++   L+  L K G  +  + + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M       N+ ++  +++GLCKA + + A   ++ M   G  P +VTYN LI G C  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 235 GGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
               +M  A  V ++ M+E+G +P+ VT+NT I G CK   +   +++ EEM   GI+  
Sbjct: 129 N---RMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVT+ S+I+GLC   ++D+A  +   M+  G  P+ +T + +++   +   ++    + +
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + G      TY  LI A  + G +E A       ++ G + +V T+N  I  L R G
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
                +NI+  ++ +G    L++YN ++  LCK G    A  L  +M      K  P+++
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK--PDVI 363

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGL-IPNQTTY 510
            +N LI GFC+ G+L  A  LL E+  K + +P+  TY
Sbjct: 364 FFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 208/436 (47%), Gaps = 25/436 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+  L  A+K       LH+   NG   SV T     +T  D LC++  +     L    
Sbjct: 16  LIAGLCKARKPRHALELLHVMAANGYDASVVT----YTTLIDGLCKSGDLDAAQAL---- 67

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                      ++  D G   +V++   L+  L K  +  D     K M R   E +L +
Sbjct: 68  ----------LQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVT 117

Query: 189 FNFVLNGLCKAGKLNKASDIMED-MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +N +++GLC A +++ A  ++++ M   G  P VVTYN  I G CK G   K+ K   + 
Sbjct: 118 YNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAG---KLDKGLEML 174

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M   GI P+ VTF ++I G CK   I  A +VF+ M   G     +TY+ +++ L   
Sbjct: 175 EEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA 234

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +LD    + + M+ SG      T   LI+   +   +E A   ++   E G    V T+
Sbjct: 235 NRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTH 294

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N  I A C+ G+   A  +   M++ G LP++ +YN +I GL + GNV+    +  ++++
Sbjct: 295 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 354

Query: 428 NGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           +G  +  ++ +N L+   CK G+  +A  LL EM    K    P++VTYN +I G  + G
Sbjct: 355 SGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEM--KAKNICVPDVVTYNTMIDGQSKFG 412

Query: 487 KLEDANGLLNELLEKG 502
            L+ A  LL E+   G
Sbjct: 413 SLKQAKLLLEEMQAVG 428



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 128/244 (52%), Gaps = 4/244 (1%)

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M S         YN+LI GLC   K   A+ L   M A+G   +VVT   LI+G CK   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++ A+ L   +++ G +P+V+TY  LID  CK  R  DA      ML  G  PD+ TYN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 405 LIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           LI GL     ++    ++ EL + +G    +VTYN  +  LCK GK  K + +L+E   M
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE---M 177

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           ++    P++VT+  +I G C+  +++DA  +   +LE+G +P+  TY I+ + +     +
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 237

Query: 524 PDIE 527
             +E
Sbjct: 238 DTVE 241



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 21/169 (12%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI   CK  +   A  + + M   G    V TY  LI GL + G+++  + ++ ++ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G    +VTY  L+  LCK  +   A+  +  M +   E   P++VTYN LI G C   
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCE---PDLVTYNSLIHGLCMAN 129

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           +++DA  +L EL                  M+E G IPD+  +   ISG
Sbjct: 130 RMDDAGLVLQEL------------------MIESGRIPDVVTYNTFISG 160


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 246/516 (47%), Gaps = 18/516 (3%)

Query: 4   SANSTIEDITELIRNHHW---------SKLKNTDPNTVILQLFNSDADPVLILRYFCWST 54
           S N  ++ +  ++   HW         S L ++  + V+LQL            +F W  
Sbjct: 6   SHNQFVDSVCSIVVKGHWGNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWLD 65

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
                SHSL  +  ++H L   K +   +  L   + +  F S  ++   L    D+   
Sbjct: 66  SIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEK-IAHKDFLSSPSVLSTLVRTHDNQEV 124

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS ++  L++ Y K+       + F++   + +K  + +C  LL +L+K+G    V  +Y
Sbjct: 125 NSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIY 184

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K M +  +  N+  +N + +   K+G + +A  ++ +M   GV   + TYN L+  YCKK
Sbjct: 185 KRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKK 244

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G  Y+A ++   M   GI  + V++N+LI GFCK+  +  AM++F E+ +       
Sbjct: 245 ---GMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKN--ATPNH 299

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY +LI+G C   +L+EA+ +   M A GL P VVT N+++   C+   +  A  L ++
Sbjct: 300 VTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +SE+ L    IT NTLI+AYCK G ++ A   +N ML+ G+ PD  TY  LI G  +   
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNE 419

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E  + +M  +++ G      TY+ +V    K       ++L DE           ++  
Sbjct: 420 LESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFL---SRGICLDVSV 476

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           Y  LI+  C+  +++ A  L   +  KG+      Y
Sbjct: 477 YRALIRSSCKVERIQCAERLFYHMEGKGISGESVIY 512



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 21/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A  VF+ M  + + P+      L++   KD       K+++ M   G+   +  YN L +
Sbjct: 145 AIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFH 204

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
                G ++ A  L +EM   G+  ++ T N L++ +CKK +  +A  + + +  +G++ 
Sbjct: 205 ACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINL 264

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            +++YN+LI  +CKEGRM +A  M + +  +   P+  TY  LI G  +   +E    + 
Sbjct: 265 DIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMC 322

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
             +   G+  G+VTYN ++  LC+DG+ + A  LL+E   M + K   + +T N LI  +
Sbjct: 323 KLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE---MSERKLQADNITCNTLINAY 379

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
           C+ G L+ A    N++LE GL P+  TY+ +                   M++ GF P  
Sbjct: 380 CKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSY 439

Query: 527 EGHMYNISG 535
             + + + G
Sbjct: 440 CTYSWIVDG 448



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N    + L+  + K +    A++VFE+M  H +   +     L+N L  DG       + 
Sbjct: 125 NSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIY 184

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             M+  G+ PN+   N L +   K   VE+A  L +++  +G+   + TYNTL+  YCK+
Sbjct: 185 KRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKK 244

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G   +A +++N M   G+  D+ +YN LI G  +EG +     + +E+ N       VTY
Sbjct: 245 GMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKN--ATPNHVTY 302

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+   CK  + ++A+ +      ME +  +P +VTYN +++  CQ G++ DAN LLNE
Sbjct: 303 TTLIDGYCKTNELEEALKMCK---LMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359

Query: 498 LLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           + E+ L  +  T   +                + +M+E G  PD
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPD 403



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 11/285 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    K  + E+   + K M+ + +   + ++N +L  LC+ G++  A+ ++ +M    
Sbjct: 305 LIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERK 364

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENI 275
           +    +T N LI+ YCK G +    K+   FK+ M+E G+ P+  T+  LI GFCK   +
Sbjct: 365 LQADNITCNTLINAYCKIGDL----KSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNEL 420

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
            +A ++   M   G      TY+ +++G      +D  +AL DE ++ G+  +V    AL
Sbjct: 421 ESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRAL 480

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I   CK + ++ A  LF  +  +G+S   + Y ++  AY   G +  A +M   M  R +
Sbjct: 481 IRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRL 540

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +  V  Y C     + E  V  +        N+ M  GL++ N +
Sbjct: 541 MITVKLYRCFSTSDANENKVSQI------FWNHVMDRGLMSRNTM 579


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ +  + + V      S S +F AJ     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C +++  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYVPSVVT 418



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   V+  L K          
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL PN
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXD 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++ +E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK---ENIRLDXVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L +E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLXDEMSMKGLKPDKITY 314



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   +I  L +    + V     
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L N +   G+ P+  TY +                + +EM++ G +P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 240 NGVTFTTLIDGHCKN 254


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 238/465 (51%), Gaps = 19/465 (4%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P      S +H +  +G +     +F  +S+C      ++   +  + 
Sbjct: 225 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC--NSFIH 282

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR--ALVKEGKFEDVEYVYKEMKRRRI 182
           A  K+ + +     F      G K  ++S + +L   A   +    DV  ++  M  + I
Sbjct: 283 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 342

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             N   FN ++N   + G ++KA  I EDM++ G+ P  VT+  +I   C+   IG++  
Sbjct: 343 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDD 399

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLI 301
           A   F  MV+ G+ P+E  +  LI G C    +  A ++  EM +  I   GV  ++S+I
Sbjct: 400 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 459

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC +G++ E   + D M+ +G +PNVVT N+L+ G+C    +E+A  L D ++  G+ 
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 519

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+   Y TL+D YCK GR++DA  +   ML +GV P    Y+ ++ GL +       + +
Sbjct: 520 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 579

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++ +G    + TY +++G LC++  + +A  LL+++F M  +    +I+T+N++I  
Sbjct: 580 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISA 636

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG 521
             + G+ ++A  L + +   GL+PN  TY      +++EE  E+ 
Sbjct: 637 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 681



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 214/407 (52%), Gaps = 9/407 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  +VK+ +       F    + G+   +L CN +++ L K  + +  E + ++M    
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +L +++ +++GLCK+  ++KA  ++E M   G  P  +TYN LI GY   G   +  
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   VFK M   G++P     N+ I    K    + A  +F+ M   G    +++Y++++
Sbjct: 260 R---VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 316

Query: 302 NGL--CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +G     D  L +   + + M+  G+ PN    N LIN + +  +++KA ++F+D+  +G
Sbjct: 317 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 376

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G    G +   +
Sbjct: 377 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 436

Query: 420 NIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++E++N  +   G+  ++ ++  LCK+G+  +   ++D M +  +    PN+VT+N L
Sbjct: 437 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR---PNVVTFNSL 493

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++G+C  G +E+A  LL+ +   G+ PN   Y  + +   + G I D
Sbjct: 494 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 540



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 165/297 (55%), Gaps = 9/297 (3%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P   +Y+ LI G+ K G + K   A  +F +M+E G+LP  +  N++I   CK + +
Sbjct: 130 GLGPDDFSYS-LIYGFVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 185

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  + ++M   GIA  + TY+ +I+GLC    +D+A  + ++M+ +G +PN +T N+L
Sbjct: 186 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 245

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G+    +  ++  +F  +S  G+ P+V   N+ I A  K GR  +A  + +SM+ +G 
Sbjct: 246 IHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP 305

Query: 396 LPDVSTYNCLIAGLSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            PD+ +Y+ ++ G +   +  +  V NI N ++  G+      +NIL+ A  + G   KA
Sbjct: 306 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 365

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + + ++   M+ +   P+ VT+  +I   C+ G+L+DA    N +++ G+ P++  Y
Sbjct: 366 MLIFED---MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 419



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/481 (20%), Positives = 221/481 (45%), Gaps = 42/481 (8%)

Query: 84  SFLHMFVKNGK-------------------FTSVSTIFHALSTCSDS------------- 111
           SF+H   K+G+                     S ST+ H  +T +DS             
Sbjct: 279 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338

Query: 112 ---LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
              +  N  + ++L+ AY +          F+   + G+    ++   ++ +L + G+ +
Sbjct: 339 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NIL 227
           D  + +  M    +  +   +  ++ G C  G+L KA +++ +M +  + P  V Y + +
Sbjct: 399 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 458

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  CK+G   ++ +   +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S
Sbjct: 459 INNLCKEG---RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            GI      Y +L++G C +G++D+A+ +  +M+  G+KP  V  + +++G  + +    
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 575

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ +F ++ E G + S+ TY  ++   C+    ++A  +   +    V  D+ T+N +I+
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            + + G  +  + + + +   G+   + TY++++  L K+   ++A +L      +EK  
Sbjct: 636 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF---ISVEKSG 692

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
              +    N +++    K ++  A+  L+ + E  L    +T  ++      +G I  + 
Sbjct: 693 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 752

Query: 528 G 528
           G
Sbjct: 753 G 753



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P++ TYN LID Y +  R +   A+   +L  G+ PD  +Y+ LI G  ++G V+    +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             E++  G+   ++  N ++  LCK  +  KA S++    KM      P++ TY+++I G
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ---KMVDSGIAPDLFTYSLIIDG 213

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C+   ++ A  +L +++E G  PN  TY
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITY 242


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 205/401 (51%), Gaps = 40/401 (9%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V + N ++    K  + +    V   MK+R  E ++ ++N ++   C  G+L+ A  
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +M+ +      P V+TY ILI+    +GGI +  K   +  +M+  G+ P+  T+N +++
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK---LLDEMLSRGLRPDRYTYNVVVN 259

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A +    +  +G  AGV TYN L+  L  +GK +    L  +M+  G +P
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N +T + LI   C+   +++A+ +   + E+ L+P   +Y+ LI A C+EG+++ A    
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN------------------------ 423
           + M+  G LPD+ +YN ++A L + GN +   NI                          
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439

Query: 424 -----------ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                      E+++NG+    +TYN L+  LC+DG   +A+ LL +MF  E EK  P +
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMF--ESEKCQPTV 497

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++YN ++ G C+  ++ DA  +L  ++ +G +PN+TTY ++
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLL 538



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 196/365 (53%), Gaps = 7/365 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  V+ C +L++      K E    V  E+  +  + ++ ++N V++G CKA +++ A
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHA 165

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S +++ MK  G  P VVTYNILI  +C   G G++  A  V   ++++   P  +T+  L
Sbjct: 166 SKVLDRMKKRGFEPDVVTYNILIGNFC---GRGRLDLALRVMDQLLKDNCKPTVITYTIL 222

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+       I  AMK+ +EM S G+     TYN ++NG+C +G LD A      +  +G 
Sbjct: 223 IEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGC 282

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
              V T N L+     +   E    L  D+  +G  P+ ITY+TLI A C++G++++A  
Sbjct: 283 VAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKN 342

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M ++ + PD  +Y+ LI+ L REG V+     ++++++ G    +++YN ++ +LC
Sbjct: 343 VLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLC 402

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+G + +A+++ +   K+ +    PN  +YN L       G    A G++ E+L  G+ P
Sbjct: 403 KNGNADEALNIFE---KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459

Query: 506 NQTTY 510
           ++ TY
Sbjct: 460 DEITY 464



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 181/359 (50%), Gaps = 7/359 (1%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K  K+++  Y  + M  R  + ++     ++ G     K+ KA  +ME ++  G  P V 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVF 147

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            YN +I G+CK     ++  A  V   M + G  P+ VT+N LI  FC    +  A++V 
Sbjct: 148 AYNAVISGFCKAD---RVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVM 204

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +++        V+TY  LI      G +DEA+ L DEM++ GL+P+  T N ++NG CK+
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++++A      IS+ G    V TYN L+     EG+ E    + + ML +G  P+  TY
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITY 324

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + LI  L R+G ++  +N++  +    +     +Y+ L+ ALC++GK   A+  LD+M  
Sbjct: 325 STLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                  P+I++YN ++   C+ G  ++A  +  +L E G  PN  +Y  +   +   G
Sbjct: 385 ---GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 180/335 (53%), Gaps = 9/335 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +F   LN  CK+ K +++   ++ M + G  P V+    LI G+     + K+ KA  V 
Sbjct: 79  NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFF---NMKKIEKAIQVM 135

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + + ++G  P+   +N +I GFCK + +  A KV + M   G    VVTYN LI   C  
Sbjct: 136 EILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGR 194

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+LD A+ + D+++    KP V+T   LI     +  +++A  L D++  +GL P   TY
Sbjct: 195 GRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTY 254

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +++  CKEG ++ AF   + +   G +  VSTYN L+  L  EG  E    +M++++ 
Sbjct: 255 NVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLV 314

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKG 486
            G     +TY+ L+ ALC+DGK  +A ++L    K+ KEK   P+  +Y+ LI   C++G
Sbjct: 315 KGCEPNPITYSTLITALCRDGKIDEAKNVL----KVMKEKALAPDGYSYDPLISALCREG 370

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           K++ A   L++++  G +P+  +Y  +   + + G
Sbjct: 371 KVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG 405



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 4/294 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            FE   R    G  + V + N LLR L+ EGK+E  E +  +M  +  E N  +++ ++ 
Sbjct: 270 AFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLIT 329

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ GK+++A ++++ MK   ++P   +Y+ LI   C++   GK+  A     DM+  G
Sbjct: 330 ALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE---GKVDLAIEFLDDMISGG 386

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
            LP+ +++N+++   CK+ N   A+ +FE++G  G      +YN+L   L   G    A+
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGLSPSVITYNTLIDA 373
            +  EM+++G+ P+ +T N+LI+  C+  LV++A  +L D    +   P+VI+YNT++  
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            CK  R+ DA  +  +M++ G LP+ +TY  LI G+   G       + N LVN
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVN 560



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 164/353 (46%), Gaps = 39/353 (11%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V++   L+ A + +G  ++   +  EM  R +  +  ++N V+NG+CK G L++A +
Sbjct: 213 KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFE 272

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
            +  +   G    V TYNIL+     +G   K    + +  DM+  G  PN +T++TLI 
Sbjct: 273 FLSRISKNGCVAGVSTYNILLRDLLNEG---KWEYGEKLMSDMLVKGCEPNPITYSTLIT 329

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C+D  I  A  V + M    +A    +Y+ LI+ LC +GK+D A+   D+M++ G  P
Sbjct: 330 ALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISE------------------------------ 357
           ++++ N+++   CK    ++A  +F+ + E                              
Sbjct: 390 DILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMI 449

Query: 358 -----QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSR 411
                 G+ P  ITYN+LI   C++G ++ A  +   M +     P V +YN ++ GL +
Sbjct: 450 LEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCK 509

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
              +     ++  +VN G      TY +L+  +   G    A+ L + +  M+
Sbjct: 510 VQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMD 562



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 4/265 (1%)

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           +  F   ++  CK      ++   + M + G    V+    LI G     K+++A+ + +
Sbjct: 77  DTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME 136

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +   G KP+V   NA+I+GFCK   V+ A  + D + ++G  P V+TYN LI  +C  G
Sbjct: 137 ILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRG 195

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R++ A  + + +L     P V TY  LI     +G ++    +++E+++ G+R    TYN
Sbjct: 196 RLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYN 255

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ++V  +CK+G   +A   L    ++ K      + TYN+L++    +GK E    L++++
Sbjct: 256 VVVNGMCKEGMLDRAFEFLS---RISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFI 523
           L KG  PN  TY  +   +   G I
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKI 337



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 22/175 (12%)

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK  + +++      M++RG  PDV     LI G      +E    +M  L  +G +  +
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
             YN ++   CK  +   A  +LD   +M+K    P++VTYN+LI  FC +G+L+ A  +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLD---RMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 495 LNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNI 533
           +++LL+    P   TY I+ E                EM+ +G  PD   + YN+
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD--RYTYNV 256



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 6/234 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +    ++GK      +   +     +L  +    D L+ A  +  K  L  E      
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMK--EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G    +LS N +L +L K G  ++   +++++       N  S+N +   L  +G   
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTF 262
           +A  ++ +M S G+ P  +TYN LI   C+ G +    +A  +  DM E+    P  +++
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVD---QAIELLVDMFESEKCQPTVISY 500

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           NT++ G CK + I  A++V   M + G      TY  LI G+   G   +A+ L
Sbjct: 501 NTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 228/448 (50%), Gaps = 18/448 (4%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            +H ++  GK+  V  +   +ST    L  +  I  +L+    KN +       F     
Sbjct: 243 LIHGYLSIGKWKEVVQMLQEMST--HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIR 300

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G+K +V     LL     EG   ++      M    +  +   FN +     K   +++
Sbjct: 301 KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDE 360

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I + M+   +SP +VTY  LID  CK   +G++  A   F  M++ G+ P+   F++
Sbjct: 361 AMHIFDKMRQQRLSPNIVTYGALIDALCK---LGRVDDAVLKFNQMIDEGMTPDIFVFSS 417

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C  +    A ++F E+   GI    V +N+L+  LC +G++ EA  L D M+  G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++P+V++ N L++G C    +++A  L D I   GL P  +TYNTL+  YCK  R++DA+
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++   ML +G+ PDV TYN ++ GL + G     + +   ++N+  +  + TYNI++  L
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 445 CKDGKSKKAVSLLDEMFKM-----EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           CK+       + +DE FKM      K+ +  +I T N++I    + G+ EDA  L   + 
Sbjct: 598 CKN-------NFVDEAFKMFHSLCSKDLQL-DIFTANIMIGALLKGGRKEDAMDLFATIS 649

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             GL+P+  TY ++ E ++++G + +++
Sbjct: 650 AYGLVPDVETYCLIAENLIKEGSLEELD 677



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 209/407 (51%), Gaps = 25/407 (6%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR---RIELNLDSFNFVLNG 195
            +R  ++G    V S + LL+    E + E+   +   M          N+ ++  V++G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LCKA  +++A  + + M   GV P   TY  LI GY     IGK  +   + ++M  +G+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL---SIGKWKEVVQMLQEMSTHGL 268

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+   +  L+D  CK+   + A  +F+ +   GI   V  Y  L++G   +G L E  +
Sbjct: 269 QPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS 328

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             D M+ +G+ P+    N +   + KK ++++A  +FD + +Q LSP+++TY  LIDA C
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K GR++DA    N M+D G+ PD+  ++ L+ GL      E    +  E+++ G+R   V
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTV 448

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            +N L+  LC++G+  +A  L+D M ++      P++++YN L+ G C  G++++A  LL
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLMLRVGVR---PDVISYNTLVDGHCLTGRIDEAAKLL 505

Query: 496 NELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
           + ++  GL P++ TY  +                  EM+ KG  PD+
Sbjct: 506 DVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 206/388 (53%), Gaps = 8/388 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   D G++ +  +   L+   +  GK+++V  + +EM    ++ +   +  +L+ LCK
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCK 284

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILP 257
            G+  +A +I + +   G+ P V  Y IL+ GY  +G + +M+     F D MV NG+ P
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS----FLDLMVGNGVSP 340

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +   FN +   + K   I  AM +F++M    ++  +VTY +LI+ LC  G++D+AV   
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           ++M+  G+ P++   ++L+ G C     EKA  LF ++ +QG+    + +NTL+   C+E
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCRE 460

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           GR+ +A  + + ML  GV PDV +YN L+ G    G ++    +++ +V+ G++   VTY
Sbjct: 461 GRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTY 520

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N L+   CK  +   A SL  EM     +   P++VTYN ++ G  Q G+  +A  L   
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREML---MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++      N  TY I+   + +  F+ +
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDE 605



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 207/369 (56%), Gaps = 6/369 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +  A  K+   ++  +++ +M+++R+  N+ ++  +++ LCK G+++ A      M  
Sbjct: 346 NIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMID 405

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P +  ++ L+ G C    + K  KA+ +F ++++ GI  + V FNTL+   C++  
Sbjct: 406 EGMTPDIFVFSSLVYGLCT---VDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++ + M   G+   V++YN+L++G C+ G++DEA  L D +++ GLKP+ VT N 
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G+CK + ++ A  LF ++  +GL+P V+TYNT++    + GR  +A  +  SM++  
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              ++ TYN +I GL +   V+    + + L +  ++  + T NI++GAL K G+ + A+
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAM 642

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L      +      P++ TY ++ +   ++G LE+ + L + + E G  PN      + 
Sbjct: 643 DLFA---TISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699

Query: 515 EEMMEKGFI 523
             ++ +G I
Sbjct: 700 RWLLHRGDI 708



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 199/414 (48%), Gaps = 25/414 (6%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNG----------------KFTSVSTIFHALSTCSD 110
           G LLH         ++ SFL + V NG                K   +    H       
Sbjct: 311 GILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQ 370

Query: 111 S-LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
             L  N +    L+ A  K  +       F +  D G+   +   + L+  L    K+E 
Sbjct: 371 QRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEK 430

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E ++ E+  + I L+   FN ++  LC+ G++ +A  +++ M  +GV P V++YN L+D
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C  G I +  K   +   +V  G+ P++VT+NTL+ G+CK   I  A  +F EM   G
Sbjct: 491 GHCLTGRIDEAAK---LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   VVTYN++++GL   G+  EA  L   M+ S  + N+ T N +ING CK   V++A 
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAF 607

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA-G 408
            +F  +  + L   + T N +I A  K GR EDA  +  ++   G++PDV TY CLIA  
Sbjct: 608 KMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY-CLIAEN 666

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
           L +EG++E +  + + +  NG        N LV  L   G   +A   +S LDE
Sbjct: 667 LIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDE 720



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 185/384 (48%), Gaps = 52/384 (13%)

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK-------SLGVSPKV 221
           D   ++ EM       ++ +FN +L  + +A + + AS+++  +        S+ V+P  
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRA-RCSSASELVVSLFNRMIRECSIKVAPSS 92

Query: 222 VTYNILIDGYCKKGGIGKMYKA----------------------------------DAVF 247
            TY ILI  +C+ G +   + A                                  D + 
Sbjct: 93  FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILL 152

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-----GSHGIAAGVVTYNSLIN 302
           + M E G  P+  +++ L+ GFC ++    A+++   M     GSH     VVTY ++I+
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSH--TPNVVTYTTVID 210

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC    +D A  +   M+  G++PN  T   LI+G+      ++   +  ++S  GL P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
               Y  L+D  CK GR  +A  + +S++ +G+ P+V+ Y  L+ G + EG++  + + +
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           + +V NG+      +NI+  A  K     +A+ + D   KM +++  PNIVTY  LI   
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD---KMRQQRLSPNIVTYGALIDAL 387

Query: 483 CQKGKLEDANGLLNELLEKGLIPN 506
           C+ G+++DA    N+++++G+ P+
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPD 411



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 14/296 (4%)

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAA---MKVFEEM---GSHGIAAGVVTYNS 299
           +F +M+ +    +   FN L+    +    SA+   + +F  M    S  +A    TY  
Sbjct: 38  LFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTI 97

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPN-VVTSNALINGFCKKKLVEKAR-VLFDDISE 357
           LI   C  G+L    A    ++ +G + N  V  + L+ G C  K V++A  +L   + E
Sbjct: 98  LIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPE 157

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG---VLPDVSTYNCLIAGLSREGN 414
            G +P V +Y+ L+  +C E R E+A  + + M D G     P+V TY  +I GL +   
Sbjct: 158 FGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQM 217

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+  + +   +++ G+R    TY  L+      GK K+ V +L EM         P+   
Sbjct: 218 VDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM---STHGLQPDCYI 274

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           Y VL+   C+ G+  +A  + + ++ KG+ PN T Y I+      +G + ++   +
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 24/240 (10%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV---LFDDISEQ---GLSPS 363
           L++A+ L DEM+      +V   N L+    + +    + +   LF+ +  +    ++PS
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV-LPDVSTYNCLIAGLSREGNVEGVRNIM 422
             TY  LI  +C+ GR++  FA    +L  G  + D   ++ L+ GL     V+   +I+
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 423 -NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
              +   G    + +Y+IL+   C + ++++A+ LL  M         PN+VTY  +I G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY--------------QIVR--EEMMEKGFIPD 525
            C+   ++ A G+   +++KG+ PN  TY              ++V+  +EM   G  PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)

Query: 61  HSLLLTGR------LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDS 111
           H L  TGR      L  S++ ++    I ++   ++   KN        +FH+L  CS  
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL--CSKD 617

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  +    ++++ A +K  +     + F     YGL   V +   +   L+KEG  E+++
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELD 677

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++  M+      N    N ++  L   G +N+A   +  +     S +  T ++LI  Y
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIY 737

Query: 232 CK 233
            +
Sbjct: 738 SR 739


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 211/399 (52%), Gaps = 16/399 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL---------- 184
           G E  ++   +G ++ ++S N +L+ L    ++ DVE +  EM +    L          
Sbjct: 205 GLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTP 264

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++  +  +++G+CK G    A++I+  M S G+ P VV YN ++ G C      +  KA+
Sbjct: 265 DIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSAD---RWEKAE 321

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +  +M +     ++VTFN L+D FC++  +   +++ E+M  HG    V+TY ++ING 
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +G +DEAV L   M + G KPN ++   ++ G C  +    A  L   + +QG  P+ 
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +T+NT+I+  CK+G +E A  +   ML  G  PD+ +Y+ +I GL + G  E    ++N 
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++N G+   ++TY+ +  AL ++G+  K + + D    ++      + V YN +I   C+
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFD---NIQDATIRSDAVLYNAVISSLCK 558

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           + + + A   L  ++  G +PN++TY  + + +  +G +
Sbjct: 559 RRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLL 597



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 196/365 (53%), Gaps = 6/365 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           EA  +   +G    +     ++  + KEG  E    +   M    ++ N+  +N VL G+
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGI 311

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C A +  KA +++ +M         VT+NIL+D +C+ G + ++ +   + + M+E+G +
Sbjct: 312 CSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIE---LLEQMLEHGCM 368

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ +T+ T+I+GFCK+  I  A+ + + M S G     ++Y  ++ GLC   +  +A  L
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M+  G  PN VT N +IN  CKK LVE+A  L   +   G +P +I+Y+T+ID   K
Sbjct: 429 MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G+ E+A  + N M+++G+ P+V TY+ +   L+REG ++ V  + + + +  +R+  V 
Sbjct: 489 AGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVL 548

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN ++ +LCK  ++  A+  L  M         PN  TY  LIKG   +G L +A  LL+
Sbjct: 549 YNAVISSLCKRRETDLAIDFLAYMVS---NGCMPNESTYTALIKGLASEGLLCEAQDLLS 605

Query: 497 ELLEK 501
           EL  +
Sbjct: 606 ELCSR 610



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 191/374 (51%), Gaps = 10/374 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ +  + G +     V + +  +   L+  + N V+N +C  G +++  +++  +   G
Sbjct: 157 IIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFG 216

Query: 217 VSPKVVTYNILIDGYC--KKGG-----IGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
               +V+YN ++ G C  K+ G     + +M K       M ++G  P+   + T+IDG 
Sbjct: 217 CEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGI 276

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+ +   A ++   M S+G+   VV YN+++ G+C   + ++A  L  EM       + 
Sbjct: 277 CKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDD 336

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N L++ FC+  LV++   L + + E G  P VITY T+I+ +CKEG +++A  +  +
Sbjct: 337 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKN 396

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G  P+  +Y  ++ GL           +M+ ++  G     VT+N ++  LCK G 
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            ++A+ LL +M         P++++Y+ +I G  + GK E+A  LLN ++ KG+ PN  T
Sbjct: 457 VEQAIELLKQMLV---NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513

Query: 510 YQIVREEMMEKGFI 523
           Y  +   +  +G I
Sbjct: 514 YSSMAFALAREGRI 527



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 199/405 (49%), Gaps = 21/405 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI-----IIDMLM 123
           +L  L  AK++  +   +   VK         +  ALS  +   C   I     IID   
Sbjct: 227 VLKGLCAAKRWGDVEELMDEMVK---------VHEALSQMAQHGCTPDIRMYATIID--- 274

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
               K     +  E   R   YGLK +V+  N +L+ +    ++E  E +  EM ++   
Sbjct: 275 -GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCP 333

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
           L+  +FN +++  C+ G +++  +++E M   G  P V+TY  +I+G+CK+G I +   A
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE---A 390

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + K+M   G  PN +++  ++ G C  E    A ++   M   G     VT+N++IN 
Sbjct: 391 VMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINF 450

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G +++A+ L  +M+ +G  P++++ + +I+G  K    E+A  L + +  +G++P+
Sbjct: 451 LCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           VITY+++  A  +EGR++    M +++ D  +  D   YN +I+ L +    +   + + 
Sbjct: 511 VITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLA 570

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
            +V+NG      TY  L+  L  +G   +A  LL E+      +K
Sbjct: 571 YMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRK 615



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 176/369 (47%), Gaps = 22/369 (5%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+R+L   G+  D     + +        +  +N ++ G C+ G++  A  +     +
Sbjct: 56  SALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLA---AA 109

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           + V P   TY  ++ G C   G G++  A AV  +M     +P    ++ +I+  C+   
Sbjct: 110 VPVPPNAYTYFPVVRGLC---GRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGG 166

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            S+A++V E + + G        N +IN +C  G +DE + +  ++   G + ++V+ NA
Sbjct: 167 YSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNA 226

Query: 335 LINGFCKKKLVEKARVLFDD----------ISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ G C  K       L D+          +++ G +P +  Y T+ID  CKEG  E A 
Sbjct: 227 VLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVAN 286

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M   G+ P+V  YN ++ G+      E    ++ E+         VT+NILV   
Sbjct: 287 EILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFF 346

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C++G   + + LL++M    +    P+++TY  +I GFC++G +++A  LL  +   G  
Sbjct: 347 CQNGLVDRVIELLEQML---EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCK 403

Query: 505 PNQTTYQIV 513
           PN  +Y IV
Sbjct: 404 PNTISYTIV 412



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 163/358 (45%), Gaps = 43/358 (12%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            + ++  LC AG+    +D +  + + G +  VV YN ++ GYC+ G +    +  A   
Sbjct: 55  LSALIRSLCVAGR---TADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
                 + PN  T+  ++ G C    I+ A+ V +EM S         Y+ +I   C  G
Sbjct: 112 ------VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG 165

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
               A+ + + + A G   +    N +IN  C +  V++   +   +   G    +++YN
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 369 TLIDAYCKEGRMEDAFAMRNSML----------DRGVLPDVSTYNCLIAGLSREGNVEGV 418
            ++   C   R  D   + + M+            G  PD+  Y  +I G+ +EG+ E  
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNV 477
             I++ + + G++  +V YN ++  +C   + +KA  LL EM+    +K  P + VT+N+
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMY----QKNCPLDDVTFNI 341

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           L+  FCQ       NGL++ ++E            + E+M+E G +PD+  +   I+G
Sbjct: 342 LVDFFCQ-------NGLVDRVIE------------LLEQMLEHGCMPDVITYTTVING 380


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 223/435 (51%), Gaps = 8/435 (1%)

Query: 49  YFCWSTKELRAS--HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +F W +    ++  H+L     ++H L   +   + +S + + V      S   +F A+ 
Sbjct: 1   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIX 60

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
               +   +  +   L+  Y+++       E ++   ++ L+    +C ++L  L+K   
Sbjct: 61  ETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKY 120

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+ V      +           FN +++  CK G +  A  + + +   G+ P VV+YN 
Sbjct: 121 FKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNT 180

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L++GY + G + + ++  +    M+ +G+ P+  T++ LI+G CK+  +  A ++F+EM 
Sbjct: 181 LMNGYIRLGDLNEGFRLKSA---MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+    VT+ +LI+G C +G++D A+ +  +M++  L P+++T N LI G CKK  ++
Sbjct: 238 VKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 297

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L D++S +GL    ITY TLID  CKEG ++ AF  R  M+   +  D   Y  LI
Sbjct: 298 QAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALI 357

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +GL +EG       ++ E+++ G++    TY +++   CK G   K   LL +   M++ 
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKD---MQRN 414

Query: 467 KKWPNIVTYNVLIKG 481
              P++VTYNVL+ G
Sbjct: 415 GHAPSVVTYNVLMNG 429



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 156/264 (59%), Gaps = 11/264 (4%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG    G L+E   L+  M+
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T+ TLID +CK GR++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+   G++   +TY  L+
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGFCQKGKLEDANGLLNE 497
              CK+G        LD  F+  K     NI    V Y  LI G CQ+G+  DA  +L E
Sbjct: 323 DGCCKEGD-------LDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           +L  GL P+  TY ++  E  +KG
Sbjct: 376 MLSVGLKPDTXTYTMIINEFCKKG 399



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 6/357 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+   ++ G   D    Y+  +  ++ +  D+   VL  L K             +   G
Sbjct: 76  LITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKYFKLVWGFXXXIXXXG 135

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++G+ +  +++
Sbjct: 136 XXXXXXFFNILMHRFCKDGDI---RIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLN 192

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL PN VT   LI
Sbjct: 193 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLI 252

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + + M  +G+ 
Sbjct: 253 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 312

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            D  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++G+S  A  +
Sbjct: 313 XDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 372

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           L EM  +  +   P+  TY ++I  FC+KG +   + LL ++   G  P+  TY ++
Sbjct: 373 LREMLSVGLK---PDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVL 426



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 101/265 (38%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 19  SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSAXAVFAAI 59

Query: 356 SEQGLSP--SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E   +    +  ++ LI  Y + G + DA        +  +     T   ++  L +  
Sbjct: 60  XETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLK 119

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V      +   G       +NIL+   CKDG  + A S+ D +       KW   P
Sbjct: 120 YFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAI------AKWGLRP 173

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V+YN L+ G+ + G L +   L + +L  G+ P+  TY +                + 
Sbjct: 174 SVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 233

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM+ KG  P+       I+GH  N
Sbjct: 234 DEMLVKGLXPNGVTFTTLIDGHCKN 258


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 211/416 (50%), Gaps = 36/416 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK     G + +V + N ++  + KEG  E    +++EMK R +  +  ++N +++G  K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+L+      E+MK +   P V+TYN LI+ +CK    GK+      +++M  NG+ PN
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK---FGKLPIGLEFYREMKGNGLKPN 234

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V+++TL+D FCK+  +  A+K + +M   G+     TY SLI+  C  G L +A  L +
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G++ NVVT  ALI+G C  + +++A  LF  +   G+ P++ +YN LI  + K  
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            M+ A  + N +  RG+ PD+  Y   I GL     +E  + +MNE+   G++A  + Y 
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKK------------------------------ 468
            L+ A  K G   + + LLDEM +++ E                                
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474

Query: 469 ---WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                N   +  +I G C+  ++E A  L  ++++KGL+P++T Y  + +   ++G
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 530



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L   L+  G  E+    + +MKR R+     S N +L+   K GK +      +DM  
Sbjct: 64  DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 123

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V TYNI+ID  CK+G +     A  +F++M   G++P+ VT+N++IDGF K   
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDV---EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   +  FEEM        V+TYN+LIN  C  GKL   +    EM  +GLKPNVV+ + 
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++ FCK+ ++++A   + D+   GL P+  TY +LIDA CK G + DAF + N ML  G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  +V TY  LI GL     ++    +  ++   G+   L +YN L+    K     +A+
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL+E   ++     P+++ Y   I G C   K+E A  ++NE+ E G+  N   Y  + 
Sbjct: 361 ELLNE---LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 515 EEMMEKG 521
           +   + G
Sbjct: 418 DAYFKSG 424



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 173/323 (53%), Gaps = 8/323 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ + + L   G L +A      MK   V PK  + N L+  + K   +GK       FK
Sbjct: 63  FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAK---LGKTDDVKRFFK 119

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           DM+  G  P   T+N +ID  CK+ ++ AA  +FEEM   G+    VTYNS+I+G    G
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 179

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LD+ V   +EM     +P+V+T NALIN FCK   +      + ++   GL P+V++Y+
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+DA+CKEG M+ A      M   G++P+  TY  LI    + GN+     + NE++  
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 299

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGK 487
           G+   +VTY  L+  LC   + K+A    +E+F KM+     PN+ +YN LI GF +   
Sbjct: 300 GVEWNVVTYTALIDGLCDAERMKEA----EELFGKMDTAGVIPNLASYNALIHGFVKAKN 355

Query: 488 LEDANGLLNELLEKGLIPNQTTY 510
           ++ A  LLNEL  +G+ P+   Y
Sbjct: 356 MDRALELLNELKGRGIKPDLLLY 378



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 211/447 (47%), Gaps = 32/447 (7%)

Query: 104 ALSTCSDSLCRNSII-------IDMLMLAYVKNMKPHLGF-----------EAFKRAGD- 144
           + ST  D+ C+  ++       +DM  +  V N   +              +AF+   + 
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 145 --YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
              G++ +V++   L+  L    + ++ E ++ +M    +  NL S+N +++G  KA  +
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           ++A +++ ++K  G+ P ++ Y   I G C    + K+  A  V  +M E GI  N + +
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCS---LEKIEAAKVVMNEMKECGIKANSLIY 413

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            TL+D + K  N +  + + +EM    I   VVT+  LI+GLC +  + +AV   + +  
Sbjct: 414 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473

Query: 323 S-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL+ N     A+I+G CK   VE A  LF+ + ++GL P    Y +L+D   K+G + 
Sbjct: 474 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 533

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A A+R+ M + G+  D+  Y  L+ GLS    ++  R+ + E++  G+    V    ++
Sbjct: 534 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 593

Query: 442 GALCKDGKSKKAVSLLDEMFKME-----KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
               + G   +AV L   + K +      +   PNI +   L+     + +    + L  
Sbjct: 594 KKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSDQNLVSSREHEEQETRISNLQP 653

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +LL    I     ++++R E +  G+I
Sbjct: 654 KLLLG--IYKLAIHRLIRGESLSMGYI 678



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 138/285 (48%), Gaps = 18/285 (6%)

Query: 241 YKADAVFKDMV---------------ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
           Y A++V K+MV                N  +P    F+ L         +  A++ F +M
Sbjct: 27  YDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKM 86

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +     + N L++     GK D+      +M+ +G +P V T N +I+  CK+  V
Sbjct: 87  KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 146

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           E AR LF+++  +GL P  +TYN++ID + K GR++D       M D    PDV TYN L
Sbjct: 147 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 206

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I    + G +        E+  NG++  +V+Y+ LV A CK+G  ++A+    +M ++  
Sbjct: 207 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-- 264

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
               PN  TY  LI   C+ G L DA  L NE+L+ G+  N  TY
Sbjct: 265 -GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 246/477 (51%), Gaps = 24/477 (5%)

Query: 25  KNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRS 84
           +N +P ++  ++    +DP+L L++F +S   L  +H+      L+ +L           
Sbjct: 72  RNLNP-SIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC---------- 120

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
                 K G   S   +F  +   SD +  +S I+++L+ +Y +  K             
Sbjct: 121 ------KVGLNDSAKIVFDCMR--SDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHC 172

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG+K S    N LL  LVK+   ++   +++E        ++ SFN ++ GLC+ G+++K
Sbjct: 173 YGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDK 232

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +  ++M + G  P +V+YN LI+G+C+   I K +  D + +DM+  G+ P+ +T+ +
Sbjct: 233 AFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH--DLLKEDMLIKGVSPDVITYTS 290

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I G+CK  ++ AA ++F+EM S GI     T+N LI+G    G +  A+ + ++M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT  +LI+G+C++  V +   L++++  + LSP+V TY  LI+A CKE R+ +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                +    V+P    YN +I G  + G V+    I+ E+     R   +T+ IL+   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           C  G+  +A+S     +KM +    P+ +T N LI    + G   +A+ +    L+K
Sbjct: 471 CMKGRMVEAIS---TFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 38/434 (8%)

Query: 98  VSTIF---HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD--YGLK---- 148
           V T+F   H+L+ C   L RN              + P + FE  KR  D   GLK    
Sbjct: 53  VCTLFFRSHSLNACFGYLSRN--------------LNPSIAFEVIKRFSDPLLGLKFFEF 98

Query: 149 -SSVLSCNQ-------LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
             + LS N        L+R L K G  +  + V+  M+   I  +      +++   + G
Sbjct: 99  SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           KL+ A + + ++   G+      YN L++   K+  + +   A  +F++ +E   +P+  
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE---AVLLFREHLEPYFVPDVY 215

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-ALRDE 319
           +FN LI G C+   I  A + F+ MG+ G    +V+YN+LING C   ++ +    L+++
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED 275

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G+ P+V+T  ++I+G+CK   ++ A  LFD++   G+ P+  T+N LID + K G 
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M  A  M   ML  G LPDV T+  LI G  REG V     +  E+    +   + TY +
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ ALCK+ + ++A + L  +   +  +  P    YN +I GFC+ GK+++AN ++ E+ 
Sbjct: 396 LINALCKENRIREARNFLRHL---KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452

Query: 500 EKGLIPNQTTYQIV 513
           EK   P++ T+ I+
Sbjct: 453 EKKCRPDKITFTIL 466



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 278 AMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            +K FE   +H  I     TY+ L+  LC  G  D A  + D M + G+ P+      L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + + +   ++ A+   +++   G+  S   YN L++   K+  +++A  +    L+   +
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV ++N LI GL R G ++        + N G    +V+YN L+   C+  +  K   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--- 513
           L E   M  +   P+++TY  +I G+C+ G ++ A+ L +E++  G+ PN  T+ ++   
Sbjct: 272 LKE--DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 514 -------------REEMMEKGFIPDI 526
                         E+M+  G +PD+
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDV 355


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 238/465 (51%), Gaps = 19/465 (4%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P      S +H +  +G +     +F  +S+C      ++   +  + 
Sbjct: 281 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC--NSFIH 338

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR--ALVKEGKFEDVEYVYKEMKRRRI 182
           A  K+ + +     F      G K  ++S + +L   A   +    DV  ++  M  + I
Sbjct: 339 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 398

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             N   FN ++N   + G ++KA  I EDM++ G+ P  VT+  +I   C+   IG++  
Sbjct: 399 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDD 455

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLI 301
           A   F  MV+ G+ P+E  +  LI G C    +  A ++  EM +  I   GV  ++S+I
Sbjct: 456 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC +G++ E   + D M+ +G +PNVVT N+L+ G+C    +E+A  L D ++  G+ 
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 575

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+   Y TL+D YCK GR++DA  +   ML +GV P    Y+ ++ GL +       + +
Sbjct: 576 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 635

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++ +G    + TY +++G LC++  + +A  LL+++F M  +    +I+T+N++I  
Sbjct: 636 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISA 692

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG 521
             + G+ ++A  L + +   GL+PN  TY      +++EE  E+ 
Sbjct: 693 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 737



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 214/407 (52%), Gaps = 9/407 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  +VK+ +       F    + G+   +L CN +++ L K  + +  E + ++M    
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +L +++ +++GLCK+  ++KA  ++E M   G  P  +TYN LI GY   G   +  
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   VFK M   G++P     N+ I    K    + A  +F+ M   G    +++Y++++
Sbjct: 316 R---VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 372

Query: 302 NGL--CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +G     D  L +   + + M+  G+ PN    N LIN + +  +++KA ++F+D+  +G
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G    G +   +
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 420 NIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++E++N  +   G+  ++ ++  LCK+G+  +   ++D M +  +    PN+VT+N L
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR---PNVVTFNSL 549

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++G+C  G +E+A  LL+ +   G+ PN   Y  + +   + G I D
Sbjct: 550 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 596



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 173 VYKEMKR----RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           ++K M R    R     + ++N +++   +  + +    I+  +   G+ P   +Y+ LI
Sbjct: 139 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 197

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+ K G + K   A  +F +M+E G+LP  +  N++I   CK + +  A  + ++M   
Sbjct: 198 YGFVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GIA  + TY+ +I+GLC    +D+A  + ++M+ +G +PN +T N+LI+G+    +  ++
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +F  +S  G+ P+V   N+ I A  K GR  +A  + +SM+ +G  PD+ +Y+ ++ G
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 409 LSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            +   +  +  V NI N ++  G+      +NIL+ A  + G   KA+ + ++   M+ +
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED---MQNK 431

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              P+ VT+  +I   C+ G+L+DA    N +++ G+ P++  Y
Sbjct: 432 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 475



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/481 (20%), Positives = 221/481 (45%), Gaps = 42/481 (8%)

Query: 84  SFLHMFVKNGK-------------------FTSVSTIFHALSTCSDS------------- 111
           SF+H   K+G+                     S ST+ H  +T +DS             
Sbjct: 335 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 394

Query: 112 ---LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
              +  N  + ++L+ AY +          F+   + G+    ++   ++ +L + G+ +
Sbjct: 395 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 454

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NIL 227
           D  + +  M    +  +   +  ++ G C  G+L KA +++ +M +  + P  V Y + +
Sbjct: 455 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 514

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  CK+G   ++ +   +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S
Sbjct: 515 INNLCKEG---RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 571

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            GI      Y +L++G C +G++D+A+ +  +M+  G+KP  V  + +++G  + +    
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 631

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ +F ++ E G + S+ TY  ++   C+    ++A  +   +    V  D+ T+N +I+
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 691

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            + + G  +  + + + +   G+   + TY++++  L K+   ++A +L      +EK  
Sbjct: 692 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF---ISVEKSG 748

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
              +    N +++    K ++  A+  L+ + E  L    +T  ++      +G I  + 
Sbjct: 749 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 808

Query: 528 G 528
           G
Sbjct: 809 G 809


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+   ++ L+    +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           +K       M  +G+ P+  T++ LI+G CK+  ++ A  +F EM   G+    VT+ +L
Sbjct: 191 FKLKNA---MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +GK+D A+    +M++    P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG ++ AF +R +M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++    TY +++   CK    K A  LL E   M+++   P +VT
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKE---MQRQGHVPCVVT 418



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 162/274 (59%), Gaps = 3/274 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LD+   L++ M ASG++P+V T + LING CK+  + +A  LF+++ ++GL P+ +T
Sbjct: 184 LGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G+++ A      ML +  LPD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMR 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G    A  L + M    KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMV---KESIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +  DA  +L E+L  GL P+  TY ++  E  +K
Sbjct: 361 RATDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 145/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI+ + +   +  A++ F     H +     T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L              E++  G   ++   N L++ FCK+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y + G ++  F ++N+M   GV PDV TY+ LI GL +E  +    +
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEAND 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + NE+++ G+    VT+  L+   CK+GK   A+    +M     +   P+++TYN LI 
Sbjct: 228 LFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLS---QCFLPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  LL+E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLLDEMRMKGLKPDKITY 314


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 211/423 (49%), Gaps = 46/423 (10%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF------- 189
           E   R   YG +   +S   +L+ L    ++EDVE ++ EM  +    N  +F       
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 190 ----------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
                                       N V+N +CK G+++ A   + +M S G SP  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           ++Y  ++ G C+     +   A  + K+MV     PNEVTFNT I   C+   I  A  +
Sbjct: 356 ISYTTVLKGLCRAE---RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E+M  HG    +VTYN+L+NG CV G++D A+ L   M     KPN +T   L+ G C 
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCN 469

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            + ++ A  L  ++ ++  +P+V+T+N L+  +C++G M++A  +   M++ G  P++ T
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           YN L+ G++ + N E    +++ LV+NG+   +VTY+ ++G L ++ + ++A+    +MF
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI----KMF 585

Query: 462 KMEKE-KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            + ++    P  V YN ++   C++   + A      ++  G +PN+ TY  + E +  +
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645

Query: 521 GFI 523
            F+
Sbjct: 646 DFL 648



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 47/405 (11%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           RA   G    V  C +L+R L + G+  D   V +  +R    +++ ++N ++ G C+ G
Sbjct: 68  RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYG 127

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +L+ A  ++    S+ V+P   TY  +I G C +G +G+   A ++  DM+  G  P+ V
Sbjct: 128 QLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGE---ALSLLDDMLHRGCQPSVV 181

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA----- 315
           T+  L++  CK      AM+V +EM + G    +VTYN +ING+C +G++D+A       
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241

Query: 316 ------------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLV 345
                                         L  EMM     PN VT + L+  FC+  +V
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           E+A  + + +S  G + +    N +I+  CK+GR++DAF   N+M   G  PD  +Y  +
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 361

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + GL R    E  + ++ E+V        VT+N  +  LC+ G  ++A  L+++M +   
Sbjct: 362 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E    NIVTYN L+ GFC +G+++ A  L   +  K   PN  TY
Sbjct: 422 EV---NIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 49/417 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV++   LL A+ K   F     V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + +  + S G  P  V+Y  ++ G C      +    + +F +M+E   +PNEVTF+ L
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLC---AAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA---------- 315
           +  FC+   +  A++V E+M  HG AA     N +IN +C  G++D+A            
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 316 -------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
                                    L  EM+     PN VT N  I   C+K L+E+A +
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +SE G   +++TYN L++ +C +GR++ A  +  SM  +   P+  TY  L+ GL 
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLC 468

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
               ++    ++ E++       +VT+N+LV   C+ G   +A+ L+++M +       P
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME---HGCTP 525

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           N++TYN L+ G       E+A  LL+ L+  G+ P+  TY  +     RE+ +E+  
Sbjct: 526 NLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 201/390 (51%), Gaps = 9/390 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  DML+  + +        +  ++   +G  ++   CN ++  + K+G+ +D     
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M       +  S+  VL GLC+A +   A +++++M      P  VT+N  I   C+K
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G I    +A  + + M E+G   N VT+N L++GFC    + +A+++F  M         
Sbjct: 404 GLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNT 457

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +TY +L+ GLC   +LD A  L  EM+     PNVVT N L++ FC+K L+++A  L + 
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           + E G +P++ITYNTL+D    +   E+A  + + ++  GV PD+ TY+ +I  LSRE  
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           VE    + + + + GMR   V YN ++ ALCK   +  A+   D    M      PN +T
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI---DFFAYMVSNGCMPNELT 634

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           Y  LI+G   +  L++   LL EL  +G++
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 13/264 (4%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           ++++ A ++ +   S G A  V     LI  LC  G+  +A  +      SG   +V   
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+ G+C+   ++ AR L   I+   ++P   TY  +I   C  GR+ +A ++ + ML 
Sbjct: 117 NTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  P V TY  L+  + +         +++E+   G    +VTYN+++  +C++G+   
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A   L+   ++      P+ V+Y  ++KG C   + ED   L  E++EK  +PN+ T+ +
Sbjct: 234 AREFLN---RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 513 V-----REEMMEKGF--IPDIEGH 529
           +     R  M+E+    +  + GH
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGH 314



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 22/244 (9%)

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+ +  L     L EA  L D   + G  P+V     LI   C++     A  +      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G +  V  YNTL+  YC+ G+++ A  +  SM    V PD  TY  +I GL   G V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             ++++++++ G +  +VTY +L+ A+CK     +A+ +LDEM     +   PNIVTYNV
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM---RAKGCTPNIVTYNV 220

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKG 521
           +I G C++G+++DA   LN L   G  P+  +Y  V +                EMMEK 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 522 FIPD 525
            +P+
Sbjct: 281 CMPN 284


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 246/477 (51%), Gaps = 24/477 (5%)

Query: 25  KNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRS 84
           +N +P ++  ++    +DP+L L++F +S   L  +H+      L+ +L           
Sbjct: 72  RNLNP-SIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC---------- 120

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
                 K G   S   +F  +   SD +  +S I+++L+ +Y +  K             
Sbjct: 121 ------KVGLNDSAKIVFDCMR--SDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHC 172

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG+K S    N LL  LVK+   ++   +++E        ++ SFN ++ GLC+ G+++K
Sbjct: 173 YGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDK 232

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +  ++M + G  P +V+YN LI+G+C+   I K +  D + +DM+  G+ P+ +T+ +
Sbjct: 233 AFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH--DLLKEDMLIKGVSPDVITYTS 290

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I G+CK  ++ AA ++F+EM S GI     T+N LI+G    G +  A+ + ++M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P+VVT  +LI+G+C++  V +   L++++  + LSP+V TY  LI+A CKE R+ +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                +    V+P    YN +I G  + G V+    I+ E+     R   +T+ IL+   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           C  G+  +A+S     +KM +    P+ +T N LI    + G   +A+ +    L+K
Sbjct: 471 CMKGRMVEAIS---TFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 38/434 (8%)

Query: 98  VSTIF---HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD--YGLK---- 148
           V T+F   H+L+ C   L RN              + P + FE  KR  D   GLK    
Sbjct: 53  VCTLFFRSHSLNACFGYLSRN--------------LNPSIAFEVIKRFSDPLLGLKFFEF 98

Query: 149 -SSVLSCNQ-------LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
             + LS N        L+R L K G  +  + V+  M+   I  +      +++   + G
Sbjct: 99  SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           KL+ A + + ++   G+      YN L++   K+  + +   A  +F++ +E   +P+  
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE---AVLLFREHLEPYFVPDVY 215

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-ALRDE 319
           +FN LI G C+   I  A + F+ MG+ G    +V+YN+LING C   ++ +    L+++
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED 275

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M+  G+ P+V+T  ++I+G+CK   ++ A  LFD++   G+ P+  T+N LID + K G 
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M  A  M   ML  G LPDV T+  LI G  REG V     +  E+    +   + TY +
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+ ALCK+ + ++A + L  +   +  +  P    YN +I GFC+ GK+++AN ++ E+ 
Sbjct: 396 LINALCKENRIREARNFLRHL---KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452

Query: 500 EKGLIPNQTTYQIV 513
           EK   P++ T+ I+
Sbjct: 453 EKKCRPDKITFTIL 466



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 278 AMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            +K FE   +H  I     TY+ L+  LC  G  D A  + D M + G+ P+      L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + + +   ++ A+   +++   G+  S   YN L++   K+  +++A  +    L+   +
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PDV ++N LI GL R G ++        + N G    +V+YN L+   C+  +  K   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--- 513
           L E   M  +   P+++TY  +I G+C+ G ++ A+ L +E++  G+ PN  T+ ++   
Sbjct: 272 LKE--DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 514 -------------REEMMEKGFIPDI 526
                         E+M+  G +PD+
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDV 355


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 201/370 (54%), Gaps = 10/370 (2%)

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           A D      V+S N ++  L KEG  +     Y EM  RR+  +  ++N ++  L KA  
Sbjct: 2   ADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQA 61

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A +++  M    V P   TYN ++ GYC     G+  KA  +F+ M  +GI P+ VT
Sbjct: 62  MDRAMEVLTVM----VMPNCFTYNSIMHGYCSS---GQSEKAIGIFRKMCSDGIEPDVVT 114

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +N+L+D  CK+   + A K+F+ M   G+   + TY +L++G    G L E   L   M+
Sbjct: 115 YNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMV 174

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G++ +    N LI  + K++ V++  ++F  + +QGL+P+ + Y T+ID  CK GR++
Sbjct: 175 QNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLD 234

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA      M+D+G+ P+V  Y  LI  L      E    ++ E+++ G+   +V +N ++
Sbjct: 235 DAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTIL 294

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +LCK+G+  ++  L D +  +      P+++TY+ LI G+C  GK++ A  LL  ++  
Sbjct: 295 DSLCKEGRVIESKKLFDLLGHIGVN---PDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV 351

Query: 502 GLIPNQTTYQ 511
           GL P+  TY 
Sbjct: 352 GLKPDSVTYS 361



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 198/359 (55%), Gaps = 6/359 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++      G+ E    ++++M    IE ++ ++N +++ LCK GK  +A  I + M  
Sbjct: 81  NSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVK 140

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P + TY  L+ GY  KG + +M+   A+   MV+NG+  +   FN LI  + K E 
Sbjct: 141 RGLKPDITTYGTLLHGYASKGALVEMHDLLAL---MVQNGMQLDHHVFNILICAYTKQEK 197

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +   + VF +M   G+    V Y ++I+GLC  G+LD+A+   ++M+  GL PNVV   +
Sbjct: 198 VDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTS 257

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI+  C     EKA  L  +I +QG++P+++ +NT++D+ CKEGR+ ++  + + +   G
Sbjct: 258 LIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V PDV TY+ LI G    G ++G   ++  +V+ G++   VTY+ L+   CK  + + A+
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L  EM   E     P+I+TYN+++ G  +  +   A  L   + E G     +TY I+
Sbjct: 378 ALFKEM---ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 193/374 (51%), Gaps = 6/374 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N    + +M  Y  + +       F++    G++  V++ N L+  L K GK  +   ++
Sbjct: 76  NCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIF 135

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M +R ++ ++ ++  +L+G    G L +  D++  M   G+      +NILI  Y K+
Sbjct: 136 DSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQ 195

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             + ++     VF  M + G+ PN V + T+IDG CK   +  AM  FE+M   G+   V
Sbjct: 196 EKVDEVV---LVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNV 252

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y SLI+ LC   K ++A  L  E++  G+ PN+V  N +++  CK+  V +++ LFD 
Sbjct: 253 VVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDL 312

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   G++P VITY+TLID YC  G+M+ A  +   M+  G+ PD  TY+ LI G  +   
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +E    +  E+ +NG+   ++TYNI++  L +  ++  A  L     ++ +      + T
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA---RITESGTQLELST 429

Query: 475 YNVLIKGFCQKGKL 488
           YN+++  F +   L
Sbjct: 430 YNIILMDFAKTNSL 443



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 180/358 (50%), Gaps = 5/358 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H +  +G+      IF  +  CSD +  + +  + LM    KN K     + F    
Sbjct: 82  SIMHGYCSSGQSEKAIGIFRKM--CSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMV 139

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GLK  + +   LL     +G   ++  +   M +  ++L+   FN ++    K  K++
Sbjct: 140 KRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVD 199

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +   M+  G++P  V Y  +IDG CK   +G++  A   F+ M++ G+ PN V + 
Sbjct: 200 EVVLVFSKMRQQGLTPNAVNYRTVIDGLCK---LGRLDDAMLNFEQMIDKGLTPNVVVYT 256

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +LI   C  +    A ++  E+   GI   +V +N++++ LC +G++ E+  L D +   
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI 316

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ P+V+T + LI+G+C    ++ A  L   +   GL P  +TY+TLI+ YCK  RMEDA
Sbjct: 317 GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDA 376

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A+   M   GV PD+ TYN ++ GL R       + +   +  +G +  L TYNI++
Sbjct: 377 LALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 169/318 (53%), Gaps = 16/318 (5%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P VV+YN +IDG  K+G + K Y     + +M++  + P+ VT+N++I    K + +  A
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAY---ITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           M+V   M    +     TYNS+++G C  G+ ++A+ +  +M + G++P+VVT N+L++ 
Sbjct: 66  MEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            CK     +AR +FD + ++GL P + TY TL+  Y  +G + +   +   M+  G+  D
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
              +N LI   +++  V+ V  + +++   G+    V Y  ++  LCK G+   A+   +
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           +M     +   PN+V Y  LI   C   K E A  L+ E+L++G+ PN   +  + + + 
Sbjct: 242 QMID---KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 519 EKGFIP------DIEGHM 530
           ++G +       D+ GH+
Sbjct: 299 KEGRVIESKKLFDLLGHI 316


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 238/465 (51%), Gaps = 19/465 (4%)

Query: 68  RLLHSLVVAKKYP---KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P      S +H +  +G +     +F  +S+C      ++   +  + 
Sbjct: 139 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC--NSFIH 196

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR--ALVKEGKFEDVEYVYKEMKRRRI 182
           A  K+ + +     F      G K  ++S + +L   A   +    DV  ++  M  + I
Sbjct: 197 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 256

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             N   FN ++N   + G ++KA  I EDM++ G+ P  VT+  +I   C+   IG++  
Sbjct: 257 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDD 313

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLI 301
           A   F  MV+ G+ P+E  +  LI G C    +  A ++  EM +  I   GV  ++S+I
Sbjct: 314 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 373

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC +G++ E   + D M+ +G +PNVVT N+L+ G+C    +E+A  L D ++  G+ 
Sbjct: 374 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 433

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+   Y TL+D YCK GR++DA  +   ML +GV P    Y+ ++ GL +       + +
Sbjct: 434 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 493

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++ +G    + TY +++G LC++  + +A  LL+++F M  +    +I+T+N++I  
Sbjct: 494 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISA 550

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG 521
             + G+ ++A  L + +   GL+PN  TY      +++EE  E+ 
Sbjct: 551 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 595



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 214/407 (52%), Gaps = 9/407 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  +VK+ +       F    + G+   +L CN +++ L K  + +  E + ++M    
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +L +++ +++GLCK+  ++KA  ++E M   G  P  +TYN LI GY   G   +  
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   VFK M   G++P     N+ I    K    + A  +F+ M   G    +++Y++++
Sbjct: 174 R---VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230

Query: 302 NGL--CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +G     D  L +   + + M+  G+ PN    N LIN + +  +++KA ++F+D+  +G
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G    G +   +
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 350

Query: 420 NIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++E++N  +   G+  ++ ++  LCK+G+  +   ++D M +  +    PN+VT+N L
Sbjct: 351 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR---PNVVTFNSL 407

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++G+C  G +E+A  LL+ +   G+ PN   Y  + +   + G I D
Sbjct: 408 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 454



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 165/297 (55%), Gaps = 9/297 (3%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P   +Y+ LI G+ K G + K   A  +F +M+E G+LP  +  N++I   CK + +
Sbjct: 44  GLGPDDFSYS-LIYGFVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 99

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  + ++M   GIA  + TY+ +I+GLC    +D+A  + ++M+ +G +PN +T N+L
Sbjct: 100 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 159

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G+    +  ++  +F  +S  G+ P+V   N+ I A  K GR  +A  + +SM+ +G 
Sbjct: 160 IHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP 219

Query: 396 LPDVSTYNCLIAGLSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            PD+ +Y+ ++ G +   +  +  V NI N ++  G+      +NIL+ A  + G   KA
Sbjct: 220 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 279

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + + ++   M+ +   P+ VT+  +I   C+ G+L+DA    N +++ G+ P++  Y
Sbjct: 280 MLIFED---MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 333



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/474 (20%), Positives = 218/474 (45%), Gaps = 42/474 (8%)

Query: 84  SFLHMFVKNGK-------------------FTSVSTIFHALSTCSDS------------- 111
           SF+H   K+G+                     S ST+ H  +T +DS             
Sbjct: 193 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252

Query: 112 ---LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
              +  N  + ++L+ AY +          F+   + G+    ++   ++ +L + G+ +
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NIL 227
           D  + +  M    +  +   +  ++ G C  G+L KA +++ +M +  + P  V Y + +
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  CK+G   ++ +   +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S
Sbjct: 373 INNLCKEG---RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            GI      Y +L++G C +G++D+A+ +  +M+  G+KP  V  + +++G  + +    
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 489

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ +F ++ E G + S+ TY  ++   C+    ++A  +   +    V  D+ T+N +I+
Sbjct: 490 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 549

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            + + G  +  + + + +   G+   + TY++++  L K+   ++A +L      +EK  
Sbjct: 550 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF---ISVEKSG 606

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              +    N +++    K ++  A+  L+ + E  L    +T  ++      +G
Sbjct: 607 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++  L KEG+  + + +   M +     N+ +FN ++ G C  G + +A  +++ M S
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P    Y  L+DGYCK G I     A  VF+DM+  G+ P  V ++ ++ G  +   
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDD---ALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +AA K+F EM   G    + TY  ++ GLC +   DEA  L +++ A  +K +++T N 
Sbjct: 487 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 546

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I+   K    ++A+ LFD IS  GL P++ TY+ +I    KE   E+A  +  S+   G
Sbjct: 547 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 606

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              D    N ++  L  +  V    N ++ +  N +     T ++L     ++GK ++ +
Sbjct: 607 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHI 666

Query: 455 SLLDEMFKM 463
            LL     M
Sbjct: 667 KLLPANMTM 675



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P++ TYN LID Y +  R +   A+   +L  G+ PD  +Y+ LI G  ++G V+    +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             E++  G+   ++  N ++  LCK  +  KA S++    KM      P++ TY+++I G
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ---KMVDSGIAPDLFTYSLIIDG 127

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            C+   ++ A  +L +++E G  PN  TY
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITY 156



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 7/270 (2%)

Query: 115 NSIIIDMLMLAY--VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           N +  + LM  Y  V NM+    F         G++ +      L+    K G+ +D   
Sbjct: 400 NVVTFNSLMEGYCLVGNMEE--AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 457

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           V+++M  + ++     ++ +L+GL +A +   A  +  +M   G +  + TY +++ G C
Sbjct: 458 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 517

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +     +   A+ + + +    +  + +TFN +I    K      A ++F+ + ++G+  
Sbjct: 518 RNNCTDE---ANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVP 574

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            + TY+ +I  L  +   +EA  L   +  SG   +    N ++     K  V KA    
Sbjct: 575 NIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 634

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             I E  L+    T + L   + +EG+  +
Sbjct: 635 SIIGENNLTLEASTISLLASLFSREGKYRE 664


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 238/465 (51%), Gaps = 19/465 (4%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  +V A   P      S +H +  +G +     +F  +S+C      ++   +  + 
Sbjct: 301 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC--NSFIH 358

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR--ALVKEGKFEDVEYVYKEMKRRRI 182
           A  K+ + +     F      G K  ++S + +L   A   +    DV  ++  M  + I
Sbjct: 359 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 418

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
             N   FN ++N   + G ++KA  I EDM++ G+ P  VT+  +I   C+   IG++  
Sbjct: 419 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDD 475

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLI 301
           A   F  MV+ G+ P+E  +  LI G C    +  A ++  EM +  I   GV  ++S+I
Sbjct: 476 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 535

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N LC +G++ E   + D M+ +G +PNVVT N+L+ G+C    +E+A  L D ++  G+ 
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 595

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+   Y TL+D YCK GR++DA  +   ML +GV P    Y+ ++ GL +       + +
Sbjct: 596 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 655

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E++ +G    + TY +++G LC++  + +A  LL+++F M  +    +I+T+N++I  
Sbjct: 656 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISA 712

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ-----IVREEMMEKG 521
             + G+ ++A  L + +   GL+PN  TY      +++EE  E+ 
Sbjct: 713 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 757



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 214/407 (52%), Gaps = 9/407 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  +VK+ +       F    + G+   +L CN +++ L K  + +  E + ++M    
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +L +++ +++GLCK+  ++KA  ++E M   G  P  +TYN LI GY   G   +  
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   VFK M   G++P     N+ I    K    + A  +F+ M   G    +++Y++++
Sbjct: 336 R---VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 392

Query: 302 NGL--CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           +G     D  L +   + + M+  G+ PN    N LIN + +  +++KA ++F+D+  +G
Sbjct: 393 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           + P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G    G +   +
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 512

Query: 420 NIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +++E++N  +   G+  ++ ++  LCK+G+  +   ++D M +  +    PN+VT+N L
Sbjct: 513 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR---PNVVTFNSL 569

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++G+C  G +E+A  LL+ +   G+ PN   Y  + +   + G I D
Sbjct: 570 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 616



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 173 VYKEMKR----RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           ++K M R    R     + ++N +++   +  + +    I+  +   G+ P   +Y+ LI
Sbjct: 159 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 217

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+ K G + K   A  +F +M+E G+LP  +  N++I   CK + +  A  + ++M   
Sbjct: 218 YGFVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GIA  + TY+ +I+GLC    +D+A  + ++M+ +G +PN +T N+LI+G+    +  ++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +F  +S  G+ P+V   N+ I A  K GR  +A  + +SM+ +G  PD+ +Y+ ++ G
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 409 LSREGN--VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            +   +  +  V NI N ++  G+      +NIL+ A  + G   KA+ + ++   M+ +
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED---MQNK 451

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              P+ VT+  +I   C+ G+L+DA    N +++ G+ P++  Y
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 495



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/474 (20%), Positives = 218/474 (45%), Gaps = 42/474 (8%)

Query: 84  SFLHMFVKNGK-------------------FTSVSTIFHALSTCSDS------------- 111
           SF+H   K+G+                     S ST+ H  +T +DS             
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 414

Query: 112 ---LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
              +  N  + ++L+ AY +          F+   + G+    ++   ++ +L + G+ +
Sbjct: 415 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 474

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NIL 227
           D  + +  M    +  +   +  ++ G C  G+L KA +++ +M +  + P  V Y + +
Sbjct: 475 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 534

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I+  CK+G   ++ +   +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S
Sbjct: 535 INNLCKEG---RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 591

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            GI      Y +L++G C +G++D+A+ +  +M+  G+KP  V  + +++G  + +    
Sbjct: 592 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 651

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A+ +F ++ E G + S+ TY  ++   C+    ++A  +   +    V  D+ T+N +I+
Sbjct: 652 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 711

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            + + G  +  + + + +   G+   + TY++++  L K+   ++A +L      +EK  
Sbjct: 712 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF---ISVEKSG 768

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              +    N +++    K ++  A+  L+ + E  L    +T  ++      +G
Sbjct: 769 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 4/315 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++  L KEG+  + + +   M +     N+ +FN ++ G C  G + +A  +++ M S
Sbjct: 532 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 591

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P    Y  L+DGYCK G I     A  VF+DM+  G+ P  V ++ ++ G  +   
Sbjct: 592 IGIEPNCYIYGTLVDGYCKNGRIDD---ALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +AA K+F EM   G    + TY  ++ GLC +   DEA  L +++ A  +K +++T N 
Sbjct: 649 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 708

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I+   K    ++A+ LFD IS  GL P++ TY+ +I    KE   E+A  +  S+   G
Sbjct: 709 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 768

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              D    N ++  L  +  V    N ++ +  N +     T ++L     ++GK ++ +
Sbjct: 769 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHI 828

Query: 455 SLLDEMFKMEKEKKW 469
            LL   ++   E  W
Sbjct: 829 KLLPAKYQF-FEGAW 842


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 209/424 (49%), Gaps = 42/424 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   VL+ N L+  L K G  E  + + +EM       N  +FN  + G C    ++KA
Sbjct: 161 GVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKA 220

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             +   M + G+ P  VTYNILI   CKKG +                            
Sbjct: 221 LYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIF 280

Query: 238 -------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                  G M +A   + +M++ G   + V +N LI GFC  +++++A + F EM   G+
Sbjct: 281 MDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGL 340

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              + TYN+LI+G C  G LDEA  +   M   G  P++++   +I G C    V +A  
Sbjct: 341 LPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQ 400

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
               + E  + P  + +N +ID + + G + +A ++R+ M+  G+ P+V TYN LI    
Sbjct: 401 FLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQI 460

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + GN+    +I  E++ NG+   +VTYN+L+GA C  G+   A+ L DEM +   E   P
Sbjct: 461 KGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYE---P 517

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +I+TY  LI+GFC +G + +A  LL +L   GL  +   +QI    +++K     + G  
Sbjct: 518 DIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQI----LIQKYCRTRVPGRA 573

Query: 531 YNIS 534
           Y+++
Sbjct: 574 YDLT 577



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 148/308 (48%), Gaps = 22/308 (7%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GK+  A  +   M++ G++P+ +T N L++G CK  ++  A  +  EM   G +    T+
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+ I G C++  +D+A+ L   M  SG+ PN VT N LI+  CKK L++ AR L + I +
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264

Query: 358 QGL---SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
                 +  +IT    +D   K+G M  A    + ML RG   DV  YN LI G     +
Sbjct: 265 DDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQD 324

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +        E+   G+   + TYN L+   CK G   +A  +   M KM      P++++
Sbjct: 325 MNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA---PDLIS 381

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMM 518
           Y ++I+G C  G +  AN  L  +LE  ++P    + +V                R++M+
Sbjct: 382 YKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMV 441

Query: 519 EKGFIPDI 526
             G  P++
Sbjct: 442 SFGIPPNV 449



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 6/261 (2%)

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I   C +  + AA+ +  +M   G+   V+T+N L+NGLC  G L++A  L  EM+  
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN  T N  I G+C    V+KA  LF  ++  G+ P+ +TYN LI A CK+G ++DA
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 384 FAMRNSMLDRGV---LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             +   +LD        D+ T    + G  ++G++       +E++  G +  +V YN+L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +   C       A     EMF   K    P+I TYN LI GFC+ G L++A  +   + +
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMF---KRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSK 372

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
            G  P+  +Y+++ + +   G
Sbjct: 373 MGAAPDLISYKMIIQGLCIHG 393



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 16/218 (7%)

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           A+I   C +  +  A  L + + ++G+ P V+T+N L++  CK G +E A  +   ML+ 
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+ +T+N  I G     NV+    + + + N+G+    VTYNIL+ ALCK G  K A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             LL+++   +  K+  +I+T  + + G  +KG +  A    +E+L++G   +   Y ++
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 514 RE----------------EMMEKGFIPDIEGHMYNISG 535
                             EM ++G +PDI  +   ISG
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISG 353


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 202/365 (55%), Gaps = 9/365 (2%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           LK+ +L  N ++   +  G  +  E V+ EM  R +  +  S+  ++ G C+ G+++   
Sbjct: 191 LKARIL--NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVD 248

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
             ++DM   G +    T  ++I  + +KG + + +     FK  V+ G+ PN + F++LI
Sbjct: 249 RWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF---WYFKKWVQMGLNPNLINFSSLI 305

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS-GL 325
           +G CK  +I  A ++ EEM   G    V T+ +LI+GLC  G  ++A  L  +++ S   
Sbjct: 306 NGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNY 365

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPNV T   +ING+CK++ + +A +L   + EQGL P+  TY  LID +CK G    A+ 
Sbjct: 366 KPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYE 425

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M   G  P++ TYN +I GL ++G       ++   + +G+ A  VTY IL+   C
Sbjct: 426 LMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFC 485

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           +   +K+A+++   MFK+  +   P++ TYNVLI  FC++ K+E++  L  E +  GL+P
Sbjct: 486 RQTDNKQALAIFSRMFKVGLQ---PDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLP 542

Query: 506 NQTTY 510
            + TY
Sbjct: 543 TKETY 547



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 184/370 (49%), Gaps = 7/370 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  ++    ++G      + +K+  +  +  NL +F+ ++NGLCK G + +A +++E+M
Sbjct: 265 TCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEM 324

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCK 271
              G  P V T+  LIDG CKKG   K ++   +F  +V  +   PN  T+  +I+G+CK
Sbjct: 325 VRKGWKPNVYTHTALIDGLCKKGWTEKAFR---LFLKLVRSDNYKPNVYTYTCMINGYCK 381

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +E ++ A  +   M   G+     TY  LI+G C  G    A  L D M   G  PN+ T
Sbjct: 382 EEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFT 441

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            NA+I+G CKK    +A  L     + GL    +TY  LI  +C++   + A A+ + M 
Sbjct: 442 YNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMF 501

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G+ PD+ TYN LIA   R+  VE    +  E V  G+     TY  ++   C+DG   
Sbjct: 502 KVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHIS 561

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A+       KM      P+ +TY  LI G C + KL++A  L   +++ GL P + T  
Sbjct: 562 SAIKFFH---KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRV 618

Query: 512 IVREEMMEKG 521
            +  E  ++G
Sbjct: 619 TLAYEYCKQG 628



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 203/411 (49%), Gaps = 45/411 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  FK+    GL  ++++ + L+  L K G  +    + +EM R+  + N+ +   +++
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 195 GLCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           GLCK G   KA  + ++ ++S    P V TY  +I+GYCK+    K+ +A+ +   M E 
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE---KLNRAEMLLIRMKEQ 398

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE- 312
           G++PN  T+  LIDG CK  N   A ++ + MG  G    + TYN++I+GLC  G+  E 
Sbjct: 399 GLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA 458

Query: 313 ----------------------------------AVALRDEMMASGLKPNVVTSNALING 338
                                             A+A+   M   GL+P++ T N LI  
Sbjct: 459 YKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIAT 518

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           FC++K VE++  LF++    GL P+  TY ++I  YC++G +  A    + M D G  PD
Sbjct: 519 FCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPD 578

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
             TY  LI+GL  E  ++    +   +++NG+    VT   L    CK G S  A+ +L+
Sbjct: 579 SITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILE 638

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            +    ++K W  I T N LI+  C + K+  A    ++LL+K L  ++ T
Sbjct: 639 RL----EKKLW--IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 181/370 (48%), Gaps = 29/370 (7%)

Query: 185 NLDSFNFVLNGLCKA----GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
           NLD    V+  + ++    GKL +A +++ +M++ G+  K    N +ID       +G +
Sbjct: 153 NLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVID---VALALGFV 209

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A+ VF +M++  ++P+  ++  ++ G+C+   IS   +  ++M   G A    T   +
Sbjct: 210 DYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLM 269

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+     G ++ A     + +  GL PN++  ++LING CK   +++A  + +++  +G 
Sbjct: 270 ISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW 329

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGVR 419
            P+V T+  LID  CK+G  E AF +   ++      P+V TY C+I G  +E  +    
Sbjct: 330 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAE 389

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            ++  +   G+     TY  L+   CK G   +A  L+D    M KE   PNI TYN +I
Sbjct: 390 MLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMD---LMGKEGFTPNIFTYNAII 446

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------------MMEKGFI 523
            G C+KG+  +A  LL   L+ GL  ++ TY I+  E                M + G  
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 524 PDIEGHMYNI 533
           PD+  H YN+
Sbjct: 507 PDM--HTYNV 514



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 7/319 (2%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + GL  +  +   L+    K G F     +   M +     N+ ++N +++GLCK G
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG 453

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +  +A  ++      G+    VTY ILI  +C++       +A A+F  M + G+ P+  
Sbjct: 454 RFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQ---TDNKQALAIFSRMFKVGLQPDMH 510

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+N LI  FC+ + +  + K+FEE    G+     TY S+I G C DG +  A+    +M
Sbjct: 511 TYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM 570

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              G KP+ +T  ALI+G C +  +++A  L++ + + GLSP  +T  TL   YCK+G  
Sbjct: 571 RDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDS 630

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +    L++ +   + T N LI  L  E  V       ++L++  +    +T    
Sbjct: 631 ATAMIILER-LEKKLW--IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAF 687

Query: 441 VGALCKDGKSKKAVSLLDE 459
             A C +      VS L E
Sbjct: 688 TTA-CYESNKFALVSDLSE 705



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 57/228 (25%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GKL EAV +  EM   GL                   V KAR+L                
Sbjct: 172 GKLKEAVNMVIEMQNHGL-------------------VLKARIL---------------- 196

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +ID     G ++ A  + + MLDR V+PD ++Y  ++ G  R G +  V   + +++ 
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G      T  +++    + G   +A     +  +M      PN++ ++ LI G C+ G 
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLN---PNLINFSSLINGLCKIGS 313

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           ++ A  +L                   EEM+ KG+ P++  H   I G
Sbjct: 314 IKQAFEML-------------------EEMVRKGWKPNVYTHTALIDG 342


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 228/472 (48%), Gaps = 28/472 (5%)

Query: 52  WSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL------HMFVKNGKFTSVSTIFHAL 105
           W    LR+S +       L S    ++    R  L         V  G   +   +  + 
Sbjct: 38  WLPPRLRSSGAKPPPTPRLESPTTRQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVESS 97

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
               D+   N ++ D+      +  +P    +A +  G  G  ++V++   L     + G
Sbjct: 98  PRPPDAALANRLVRDL-----CRRGRPD---DAERVVGACGPAATVVAYGALTDGYCRAG 149

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           +  D   V   M    ++ N  ++N +++ LC+ G++  A  +++DM   G +P VVTYN
Sbjct: 150 RLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYN 206

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           IL++  CK    G+ Y+      D++   G  PN VT+N L+DG C + ++  A+++   
Sbjct: 207 ILLEATCK----GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRN 262

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           + SHG     V YN+++ GLC   +  +A  L  EM+     PN  T N +I   C+K L
Sbjct: 263 LPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGL 322

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A  L + +S+ G + +++TYN +I+  C++  ++ A  + + M   G  PD+ TYN 
Sbjct: 323 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 382

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ GL           +M+ +  NG     VT+N L+G LC+ G    A+    E+FK  
Sbjct: 383 LLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI----EVFKQM 438

Query: 465 KEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            +K   PN +TY+ +I G  +  KL+ A  L NE+  KG  P++  YQ++ E
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAE 489



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 36/419 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           +A +  G   ++ +  + N L+  L + G+  D   V  +M  R    ++ ++N +L   
Sbjct: 153 DARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEAT 212

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-------------- 242
           CK     +A ++++ M++ G +P  VTYN+L+DG C +G +    +              
Sbjct: 213 CKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPST 272

Query: 243 ------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                             AD +  +M+     PNE TFN +I   C+   +  A+++ E+
Sbjct: 273 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  HG  A +VTYN++INGLC    +D A+ L  +M + G KP++VT N L+ G C    
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
              A  L D++++ G  P  +T+NTLI   C++G M DA  +   M D+G  P+  TY+ 
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I+GL++   ++    + NE+ + G     + Y +L   L  D   ++A+     + K++
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQ---TVRKLQ 508

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                P+ V YN ++ G C+ GK E A  ++  ++  G +P+  TY I+ E +  +G++
Sbjct: 509 DSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 567



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 183/375 (48%), Gaps = 15/375 (4%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +L  ++ L ALV  G   D      E   R  +  L   N ++  LC+ G+ + A  ++ 
Sbjct: 71  LLGSDRRLSALVHRGDL-DAALRLVESSPRPPDAAL--ANRLVRDLCRRGRPDDAERVV- 126

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
              + G +  VV Y  L DGYC+ G +G    A  V   M    + PN  T+N LI   C
Sbjct: 127 --GACGPAATVVAYGALTDGYCRAGRLGD---ARRVVGGMP---VQPNAYTYNPLIHTLC 178

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   +  A+ V ++M   G A  VVTYN L+   C      +A+ L D M A G  PN V
Sbjct: 179 ERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNV 238

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L++G C +  V+ A  L  ++   G  PS + YNT++   C   R  DA  +   M
Sbjct: 239 TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 298

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           L     P+ +T+N +I  L R+G ++    ++ ++  +G  A +VTYN ++  LC+    
Sbjct: 299 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 358

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A+ LL    KM+     P+IVTYN L+KG C   +  DA  L++ + + G +P+  T+
Sbjct: 359 DGAMGLLS---KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTF 415

Query: 511 QIVREEMMEKGFIPD 525
             +   + +KG + D
Sbjct: 416 NTLIGFLCQKGLMVD 430



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 47/428 (10%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR----NSIIIDMLM 123
           R++  + V          +H   + G+      +  ALS   D LCR    + +  ++L+
Sbjct: 156 RVVGGMPVQPNAYTYNPLIHTLCERGQ------VRDALSVLDDMLCRGCAPDVVTYNILL 209

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            A  K        E        G   + ++ N L+  +  EG  +D   + + +     +
Sbjct: 210 EATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK 269

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            +  ++N VL GLC A +   A +++ +M      P   T+N++I   C+KG    + +A
Sbjct: 270 PSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG---LLQQA 326

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             + + M ++G   N VT+N +I+G C+  N+  AM +  +M S+G    +VTYN+L+ G
Sbjct: 327 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 386

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC   +  +A  L D M  +G  P+ VT N LI   C+K L+  A  +F  + ++G +P+
Sbjct: 387 LCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 446

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSM--------------------------------- 390
            ITY+T+I    K  +++ A  + N M                                 
Sbjct: 447 SITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRK 506

Query: 391 -LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             D G+ P    YN ++ GL R G  E   +IM  +V++G     +TY IL+  L  +G 
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 566

Query: 450 SKKAVSLL 457
             +A  LL
Sbjct: 567 LNEARELL 574



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 15/342 (4%)

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           L+ L   G L+ A  ++E   S    P     N L+   C++G      + D   + +  
Sbjct: 78  LSALVHRGDLDAALRLVE---SSPRPPDAALANRLVRDLCRRG------RPDDAERVVGA 128

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G     V +  L DG+C+   +  A +V   +G   +     TYN LI+ LC  G++ +
Sbjct: 129 CGPAATVVAYGALTDGYCRAGRLGDARRV---VGGMPVQPNAYTYNPLIHTLCERGQVRD 185

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+++ D+M+  G  P+VVT N L+   CK +   +A  L D +  +G +P+ +TYN L+D
Sbjct: 186 ALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMD 245

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C EG ++DA  +  ++   G  P    YN ++ GL           ++ E++      
Sbjct: 246 GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPP 305

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
              T+N+++ +LC+ G  ++A+ LL+   KM K     NIVTYN +I G C++  ++ A 
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLE---KMSKHGCTANIVTYNAIINGLCEQRNVDGAM 362

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           GLL+++   G  P+  TY  + + +       D E  M N++
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +    +G K S ++ N +L+ L    ++ D + +  EM R     N  +FN V+ 
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK----GGIGKMYK-------- 242
            LC+ G L +A  ++E M   G +  +VTYN +I+G C++    G +G + K        
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375

Query: 243 --------------------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                               A+ +  +M +NG LP+ VTFNTLI   C+   +  A++VF
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           ++M   G     +TY+++I+GL    KLD+A+ L +EM   G  P+ +    L       
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIY-QLLAECLNDD 494

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +E+A      + + G+SP  + YN ++   C+ G+ E A  +   M+  G +PD  TY
Sbjct: 495 DTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 554

Query: 403 NCLIAGLSREGNVEGVRNIMNELVN 427
             LI GL+ EG +   R ++ +L +
Sbjct: 555 VILIEGLAYEGYLNEARELLIKLCS 579


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 217/422 (51%), Gaps = 13/422 (3%)

Query: 93  GKFTSVSTIF-HALSTCSDSLC--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS 149
           G+    + I   AL +C  S+     S+++D     + K+ +             +G++ 
Sbjct: 110 GQLADAAAILTRALGSCPGSVSPLAASVVVD----GFCKSGRVDDARALLDEMPRHGVRL 165

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           + L  N LL   V+      V+ + + M+   IE  + ++  +++ L  AG ++K   ++
Sbjct: 166 NALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVV 225

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++MK+  V+  V  Y  +I+ YC+ G +    +A  VF + V NGI PNE T+  LI+GF
Sbjct: 226 DEMKAKNVAGDVYLYTAVINAYCRAGNV---RRASEVFDECVGNGIEPNERTYGVLINGF 282

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK   + AA  +  +M   G+    + +N++I+G C  G +D A+ ++  M   G++ +V
Sbjct: 283 CKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDV 342

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N L  G C+   + +A+ L   + E+G+ P+ +TY TLI  +CKEG M +A  +   
Sbjct: 343 YTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFRE 402

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +G +P V TYN ++ G  ++G++        E+   G+   + TY  LV   C +GK
Sbjct: 403 MAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGK 462

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A+ L +EM     E   PN+V Y  LI G  ++G+ E+A  L +++L+ GL P+ + 
Sbjct: 463 VDVALKLFEEMKHRGTE---PNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSL 519

Query: 510 YQ 511
           Y 
Sbjct: 520 YS 521



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 201/377 (53%), Gaps = 11/377 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCS---DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           F K+G+      +   +       ++LC NS     L+  YV+        E  +   + 
Sbjct: 142 FCKSGRVDDARALLDEMPRHGVRLNALCYNS-----LLDCYVRRKDDARVQELLEIMENG 196

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++++V +   L+ +L   G    VE V  EMK + +  ++  +  V+N  C+AG + +A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRA 256

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S++ ++    G+ P   TY +LI+G+CK   IG+M  A+ +  DM   G+  N++ FNT+
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCK---IGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+   +  A+KV   M   GI   V TYN+L  GLC   ++ EA  L   M+  G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN VT   LI+  CK+  + +AR LF +++ +G  PSV+TYN ++D Y K+G + +A  
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            R  M  +G++PDV TY  L+ G    G V+    +  E+ + G    +V Y  L+  L 
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 446 KDGKSKKAVSLLDEMFK 462
           K+G+S++A  L D+M K
Sbjct: 494 KEGRSEEAFQLYDDMLK 510



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 174/358 (48%), Gaps = 20/358 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTCSDSLCRNSIIIDM---- 121
           LL   V  K   +++  L +    G   +V T   +  +LST  D     +++ +M    
Sbjct: 173 LLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN 232

Query: 122 ----------LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
                     ++ AY +        E F      G++ +  +   L+    K G+ E  E
Sbjct: 233 VAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAE 292

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  +M+ R +  N   FN +++G C+ G ++ A  +   M+ +G+   V TYN L  G 
Sbjct: 293 MLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGL 352

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+   + +M +A  +   M+E G+ PN VT+ TLI   CK+ ++  A ++F EM   G  
Sbjct: 353 CR---VNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAM 409

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             VVTYN +++G    G + EA   R EM   GL P+V T  +L++G C    V+ A  L
Sbjct: 410 PSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKL 469

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           F+++  +G  P+V+ Y  LI    KEGR E+AF + + ML  G+ PD S Y+ L+  L
Sbjct: 470 FEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 27/347 (7%)

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVT---YNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           AG+L  A+ I+   ++LG  P  V+    ++++DG+CK G   ++  A A+  +M  +G+
Sbjct: 109 AGQLADAAAIL--TRALGSCPGSVSPLAASVVVDGFCKSG---RVDDARALLDEMPRHGV 163

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N + +N+L+D + + ++ +   ++ E M + GI A V TY  L++ L   G + +  A
Sbjct: 164 RLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEA 223

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + DEM A  +  +V    A+IN +C+   V +A  +FD+    G+ P+  TY  LI+ +C
Sbjct: 224 VVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFC 283

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G+ME A  +   M  RGV  +   +N +I G  R+G V+    +   +   G+   + 
Sbjct: 284 KIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVY 343

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN L   LC+  +  +A +LL  M    ++   PN VTY  LI   C++G + +A  L 
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMI---EKGVPPNYVTYTTLISIHCKEGDMVEARRLF 400

Query: 496 NELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            E+  KG +P+  TY ++                R+EM +KG +PD+
Sbjct: 401 REMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDV 447



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 130/225 (57%), Gaps = 3/225 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    ++G  ++   V   M++  IEL++ ++N +  GLC+  ++ +A  ++  M  
Sbjct: 311 NTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIE 370

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV P  VTY  LI  +CK+G    M +A  +F++M   G +P+ VT+N ++DG+ K  +
Sbjct: 371 KGVPPNYVTYTTLISIHCKEG---DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS 427

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A +  +EM   G+   V TY SL++G CV+GK+D A+ L +EM   G +PNVV   A
Sbjct: 428 IREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTA 487

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           LI+G  K+   E+A  L+DD+ + GL+P    Y+ L+ +   + R
Sbjct: 488 LISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNR 532


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 202/376 (53%), Gaps = 6/376 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F      G+ ++V++ +  + A  KEG   +   ++ +M+ R +  N  ++  +++
Sbjct: 288 AYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVD 347

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CKAG+L+ A  ++++M   G+ P VVTY +++DG CK+G   K+  AD V   M   G
Sbjct: 348 GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG---KVAVADDVLSLMERAG 404

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           +  NE+ + TLI G   ++N   A+ +  EM + G+   V  Y +LI GLC   KLDEA 
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L  +M   GL+PN V    +++ F K     +A  L   I + GL P+V+TY  LID  
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G + +A +  + M + G+ P+V  Y  LI G  + G++    ++MNE+V+ GM    
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V Y  L+    K G  + A +L  +M +   +    ++  Y   I GFC    +++A G+
Sbjct: 585 VVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL---DLYCYTCFISGFCNMNMMQEARGV 641

Query: 495 LNELLEKGLIPNQTTY 510
           L+E++  G+ P++T Y
Sbjct: 642 LSEMIGTGITPDKTAY 657



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 218/449 (48%), Gaps = 62/449 (13%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            A  R     +  +  +CN +L  L +  +   V  +++ +       N+ +FN V++ L
Sbjct: 154 RALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAP----NVFTFNIVIDFL 209

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           CK G+L +A  +   MK++G SP VVTYN LIDGY K G +                   
Sbjct: 210 CKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADV 269

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G + KA + F +M   G++ N VT +T +D FCK+  +  AMK+F +
Sbjct: 270 VTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQ 329

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+     TY SL++G C  G+LD+A+ L DEM+  GL PNVVT   +++G CK+  
Sbjct: 330 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 389

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V  A  +   +   G+  + + Y TLI  +      E A  + N M ++G+  DVS Y  
Sbjct: 390 VAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGT 449

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL +   ++  +++++++ + G+R   V Y  ++ A  K GK  +AV+LL    K+ 
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL---HKIP 506

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------- 515
                PN+VTY  LI G C+ G + +A    +++ E GL PN   Y  + +         
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566

Query: 516 -------EMMEKGFIPD-------IEGHM 530
                  EM++KG   D       I+GHM
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 211/390 (54%), Gaps = 9/390 (2%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R    G    V++ N L+    K G+ E+VE +  EM++     ++ ++N ++N   K
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSK 281

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G + KA     +MK LGV   VVT +  +D +CK+G + +  K   +F  M   G++PN
Sbjct: 282 FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMK---LFAQMRVRGMMPN 338

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T+ +L+DG CK   +  A+ + +EM   G+   VVTY  +++GLC +GK+  A  +  
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLS 398

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M  +G+K N +    LI+G    K  E+A  L +++  +G+   V  Y TLI   CK  
Sbjct: 399 LMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQ 458

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++++A ++ + M D G+ P+   Y  ++    + G       +++++ ++G++  +VTY 
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYC 518

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  LCK G   +A+S  D+M ++  +   PN+  Y  LI GFC+ G L  A  L+NE+
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLD---PNVQVYTTLIDGFCKIGSLSKAVHLMNEM 575

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           ++KG+  ++  Y  + +  M++G   D++G
Sbjct: 576 VDKGMSLDKVVYTSLIDGHMKQG---DLQG 602



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 207/397 (52%), Gaps = 16/397 (4%)

Query: 131 KPHLG---FEAFKRAG-DYGLKSSVLSC--NQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           +PHL     +   RA    G   S L    + LL  L   G  +D       +++ R+  
Sbjct: 107 RPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPP 166

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  + N +L  L +    N+   ++  +     +P V T+NI+ID  CK+G   ++ +A 
Sbjct: 167 NTRTCNHILLRLAR----NRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQG---ELVEAR 219

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A+F  M   G  P+ VT+N+LIDG+ K   +     +  EM   G AA VVTYN+LIN  
Sbjct: 220 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCF 279

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G +++A +   EM   G+  NVVT +  ++ FCK+ LV +A  LF  +  +G+ P+ 
Sbjct: 280 SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNE 339

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY +L+D  CK GR++DA  + + M+ +G++P+V TY  ++ GL +EG V    ++++ 
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G++A  + Y  L+     +  S++A+ LL+EM     E    ++  Y  LI G C+
Sbjct: 400 MERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL---DVSLYGTLIWGLCK 456

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             KL++A  LL+++ + GL PN   Y  + +   + G
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAG 493



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 192/394 (48%), Gaps = 20/394 (5%)

Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           LST  D+ C+  ++ + + L              F +    G+  +  +   L+    K 
Sbjct: 307 LSTFVDAFCKEGLVREAMKL--------------FAQMRVRGMMPNEFTYTSLVDGTCKA 352

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ +D   +  EM  + +  N+ ++  +++GLCK GK+  A D++  M+  GV    + Y
Sbjct: 353 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLY 412

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
             LI G+          +A  +  +M   G+  +   + TLI G CK + +  A  +  +
Sbjct: 413 TTLIHGHFMN---KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHK 469

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    V Y ++++     GK  EAVAL  ++  SGL+PNVVT  ALI+G CK   
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           + +A   FD + E GL P+V  Y TLID +CK G +  A  + N M+D+G+  D   Y  
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTS 589

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI G  ++G+++G   +  +++  G++  L  Y   +   C     ++A  +L EM    
Sbjct: 590 LIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI--- 646

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
                P+   YN LI+ + + G +E+A+ L NE+
Sbjct: 647 GTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 5/230 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K  K     ++ H +  C   L  N++I   +M A+ K  K         +  D GL+ +
Sbjct: 456 KVQKLDEAKSLLHKMDDCG--LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPN 513

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++   L+  L K G   +    + +M+   ++ N+  +  +++G CK G L+KA  +M 
Sbjct: 514 VVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN 573

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+S   V Y  LIDG+ K+G +   +   A+   M+E G+  +   +   I GFC
Sbjct: 574 EMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF---ALKAKMIETGLQLDLYCYTCFISGFC 630

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
               +  A  V  EM   GI      YN LI      G ++EA +L++EM
Sbjct: 631 NMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 236/462 (51%), Gaps = 26/462 (5%)

Query: 74  VVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           ++  ++P I  F   L  F K   +++  ++ H L           I  D+  L  + N 
Sbjct: 299 MILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL-------KGIQPDLFTLNILINC 351

Query: 131 KPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             H+G     F    +    G   S ++ N L++ L  +G+ +   + + ++  +  +LN
Sbjct: 352 FCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 411

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             S+  ++NG+CK G    A  ++  +      P V  Y+ +ID  CK   + + Y    
Sbjct: 412 QVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY---G 468

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           +F +M   GI  + VT++TLI GFC    +  A+ +  EM    I   V TY  L++ L 
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
            +GK+ EA ++   M+ + +KP+V T N L+NG+     V+KA+ +F+ +S  G++P V 
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVH 588

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY  LI+ +CK   +++A  +   M  + ++PD  TY+ L+ GL + G +  V ++++E+
Sbjct: 589 TYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
            + G  A ++TYN L+  LCK+G   KA++L +   KM+ +   PN  T+ +L+ G C+ 
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFN---KMKDQGIRPNTFTFTILLDGLCKG 705

Query: 486 GKLEDANGLLNELLEKG-----LIPNQTTYQIVREEMMEKGF 522
           G+L+DA  +  +LL KG      I N   Y   ++ ++E+  
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 196/357 (54%), Gaps = 6/357 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V   + ++ AL K     +   ++ EM  + I  ++ +++ ++ G C  GKL +A  
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M    ++P V TY IL+D   K+G   K+ +A +V   M++  + P+  T+NTL++
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEG---KVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V TY  LING C    +DEA+ L  EM    + P
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + VT ++L++G CK   +     L D++ ++G    VITYN+LID  CK G ++ A A+ 
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N M D+G+ P+  T+  L+ GL + G ++  + +  +L+  G    +  YN+++   CK 
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQ 740

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           G  ++A+++L    KME+    PN VT++++I    +K + + A  LL +++ +GL+
Sbjct: 741 GLLEEALTMLS---KMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 201/387 (51%), Gaps = 16/387 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++  + + N L+      G+      V  ++ +R    +  + N ++ GLC  G++ KA
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKADAVFKDMVENGILPNEVT 261
               + + + G     V+Y  LI+G CK    +G I  + K D            PN   
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK-------PNVEM 449

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           ++T+ID  CK + +S A  +F EM   GI+A VVTY++LI G C+ GKL EA+ L +EM+
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + P+V T   L++   K+  V++A+ +   + +  + P V TYNTL++ Y     ++
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  + N+M   GV PDV TY  LI G  +   V+   N+  E+    M    VTY+ LV
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK G+      L+DEM    +++  P +++TYN LI G C+ G L+ A  L N++ +
Sbjct: 630 DGLCKSGRISYVWDLIDEM----RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD 685

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +G+ PN  T+ I+ + + + G + D +
Sbjct: 686 QGIRPNTFTFTILLDGLCKGGRLKDAQ 712



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 207/406 (50%), Gaps = 36/406 (8%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V   N ++ AL K     +   ++ EM  + I  N+ +++ ++ G C  GKL +A  
Sbjct: 130 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALG 189

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++  M    ++P V TYNIL+D  CK+   GK+ +A +V   M++  +  N +T++TL+D
Sbjct: 190 LLNVMVLKTINPNVCTYNILVDALCKE---GKVKEAKSVLAVMLKACVKSNVITYSTLMD 246

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+     +  A  VF  M   G+   V +YN +ING C   ++D+A+ L  EM+ S   P
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
            ++  N +++ F K K    A  L   +  +G+ P + T N LI+ +C  G++   F++ 
Sbjct: 307 -IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL 365

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             +L RG  P   T N LI GL  +G V+   +  ++L+  G +   V+Y  L+  +CK 
Sbjct: 366 AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKI 425

Query: 448 GKSKKAVSLLD-----------EMF---------------------KMEKEKKWPNIVTY 475
           G ++ A+ LL            EM+                     +M  +    ++VTY
Sbjct: 426 GDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           + LI GFC  GKL++A GLLNE++ K + P+  TY I+ + + ++G
Sbjct: 486 STLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG 531



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 189/355 (53%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  D+LC+  ++ +               +  F      G+ + V++ + L+      G
Sbjct: 451 STIIDALCKYQLVSE--------------AYGLFSEMTVKGISADVVTYSTLIYGFCIVG 496

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           K ++   +  EM  + I  ++ ++  +++ L K GK+ +A  ++  M    V P V TYN
Sbjct: 497 KLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYN 556

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L++GY     + ++ KA  VF  M   G+ P+  T+  LI+GFCK + +  A+ +F+EM
Sbjct: 557 TLMNGYLL---VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM 613

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
               +    VTY+SL++GLC  G++     L DEM   G   +V+T N+LI+G CK   +
Sbjct: 614 HQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHL 673

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +KA  LF+ + +QG+ P+  T+  L+D  CK GR++DA  +   +L +G   DV  YN +
Sbjct: 674 DKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVM 733

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I G  ++G +E    +++++  NG     VT++I++ AL K  ++ KA  LL +M
Sbjct: 734 IYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 206/405 (50%), Gaps = 23/405 (5%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V + N L+ AL KEGK ++ + V   M +  ++ N+ +++ +++G     ++ KA 
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            +   M  +GV+P V +YNI+I+G+CK   I ++ KA  +FK+M+ +   P  + FN ++
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCK---IKRVDKALNLFKEMILSR-FPPIIQFNKIL 314

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D F K ++ S A+ +   +   GI   + T N LIN  C  G++    ++  +++  G  
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P+ VT N LI G C K  V+KA    D +  QG   + ++Y TLI+  CK G    A  +
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              +  R   P+V  Y+ +I  L +   V     + +E+   G+ A +VTY+ L+   C 
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            GK K+A+ LL+EM     +   P++ TY +L+    ++GK+++A  +L  +L+  + P+
Sbjct: 495 VGKLKEAIGLLNEMV---LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551

Query: 507 QTTY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
             TY                Q V   M   G  PD+  +   I+G
Sbjct: 552 VFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 596



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 9/385 (2%)

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           ++N+   +      +    G     ++ N L++ L  +G+ ++  + + ++  +  +LN 
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            S+  ++NG+C+ G    A   +  +      P V  YN +ID  CK   + + Y    +
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAY---GL 155

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F +M   GI  N VT++TLI GFC    +  A+ +   M    I   V TYN L++ LC 
Sbjct: 156 FSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCK 215

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           +GK+ EA ++   M+ + +K NV+T + L++G+     V+KA+ +F+ +S  G++P V +
Sbjct: 216 EGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHS 275

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSM-LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           YN +I+ +CK  R++ A  +   M L R   P +  +N ++   ++  +     ++ + L
Sbjct: 276 YNIMINGFCKIKRVDKALNLFKEMILSR--FPPIIQFNKILDSFAKMKHYSTAVSLSHRL 333

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
              G++  L T NIL+   C  G+     S+L    K+ K    P+ VT N LIKG C K
Sbjct: 334 ELKGIQPDLFTLNILINCFCHMGQITFGFSVLA---KILKRGYPPSTVTLNTLIKGLCLK 390

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
           G+++ A    ++LL +G   NQ +Y
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSY 415



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 36/338 (10%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDEN 274
           G  P  VT N LI G C KG +    K    F D ++  G   N+V++ TLI+G C+  +
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQV----KEALHFHDKLLAQGFQLNQVSYATLINGVCRIGD 113

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
             AA+K   ++        V  YN++I+ LC    + EA  L  EM   G+  NVVT + 
Sbjct: 114 TRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYST 173

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI GFC    +++A  L + +  + ++P+V TYN L+DA CKEG++++A ++   ML   
Sbjct: 174 LIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V  +V TY+ L+ G      V+  +++ N +   G+   + +YNI++   CK  +  KA+
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 455 SLLDEMF-------------------------------KMEKEKKWPNIVTYNVLIKGFC 483
           +L  EM                                ++E +   P++ T N+LI  FC
Sbjct: 294 NLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             G++     +L ++L++G  P+  T   + + +  KG
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 137/250 (54%), Gaps = 3/250 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V + N L+   +   + +  ++V+  M    +  ++ ++  ++NG CK+  +++A 
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           ++ ++M    + P  VTY+ L+DG CK G I  ++    +  +M + G   + +T+N+LI
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWD---LIDEMRDRGQPADVITYNSLI 664

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DG CK+ ++  A+ +F +M   GI     T+  L++GLC  G+L +A  +  +++  G  
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +V   N +I G CK+ L+E+A  +   + E G  P+ +T++ +I+A  K+   + A  +
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784

Query: 387 RNSMLDRGVL 396
              M+ RG+L
Sbjct: 785 LRQMIARGLL 794



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 129/238 (54%), Gaps = 3/238 (1%)

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
           + ++ V  ++   G     VT N+LI GLC+ G++ EA+   D+++A G + N V+   L
Sbjct: 45  AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATL 104

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING C+      A      I  +   P+V  YNT+IDA CK   + +A+ + + M  +G+
Sbjct: 105 INGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
             +V TY+ LI G    G ++    ++N +V   +   + TYNILV ALCK+GK K+A S
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L  M K   +    N++TY+ L+ G+    +++ A  + N +   G+ P+  +Y I+
Sbjct: 225 VLAVMLKACVKS---NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 23/242 (9%)

Query: 310 LDEAVALR--DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           +D+AV+L    +++  G  P+ VT N LI G C K  V++A    D +  QG   + ++Y
Sbjct: 42  VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            TLI+  C+ G    A      +  R   P+V  YN +I  L +   V     + +E+  
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+ A +VTY+ L+   C  GK K+A+ LL+ M     +   PN+ TYN+L+   C++GK
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV---LKTINPNVCTYNILVDALCKEGK 218

Query: 488 LEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDIEGHMY 531
           +++A  +L  +L+  +  N  TY                Q V   M   G  PD+  H Y
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV--HSY 276

Query: 532 NI 533
           NI
Sbjct: 277 NI 278


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 238/488 (48%), Gaps = 13/488 (2%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVK---NGKFTSVS 99
           P   L +F  +T+        L    LLH L  A+ +P+  + L   +       + + +
Sbjct: 81  PSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYA 140

Query: 100 TIFHALSTCSD-SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
              H  S   +   C  S + DMLM A+ +          F      G    + SC+ LL
Sbjct: 141 VCNHVFSVYKEFGFC--SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLL 198

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
             LV++G+      V+ ++    I  ++   + V+N  C+ G+++ A +++E M   G+ 
Sbjct: 199 GKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLE 258

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P VVTYN L++GY    G G     + V + M E G+  N VT   L+ G+CK   +  A
Sbjct: 259 PNVVTYNGLVNGYV---GRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEA 315

Query: 279 MKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
            K+  E+     +      Y  L++G C  G++++AV +RDEM+  GLK N+V  N LI 
Sbjct: 316 EKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIK 375

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G+CK   V +A  +F  + +  L P   +YNTL+D YC+EG++  AF +   ML  G+ P
Sbjct: 376 GYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITP 435

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            V TYN +I GL   G+ +   ++ + +V  G+    ++   ++    K G S +A+ L 
Sbjct: 436 TVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLW 495

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            E+      K   + V +N +I G C+ GKL +A  + + + E GL P++ TY+ + +  
Sbjct: 496 KEILGRGFTK---STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGY 552

Query: 518 MEKGFIPD 525
            + G + +
Sbjct: 553 CKNGNVQE 560



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 208/377 (55%), Gaps = 13/377 (3%)

Query: 136 FEAFKRA----GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS--F 189
           FE  +R      + G+  +V++C  L+R   K+GK ++ E + +E++   + L +D   +
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDEL-LVVDERVY 335

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
             +++G C+ G++  A  I ++M  +G+   +V  N LI GYCK   +G++ +A+ VF  
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCK---LGQVCEAERVFVG 392

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV+  + P+  ++NTL+DG+C++  +S A  + EEM   GI   VVTYN++I GL   G 
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS 452

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            D+A+ L   M+  G+ PN ++   +++ F K    ++A +L+ +I  +G + S + +NT
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +I   CK G++ +A A+ + M + G+ PD  TY  L  G  + GNV+    I   +    
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQA 572

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           M A +  YN L+  L K  K      LL E   M+     PN+VTY  LI G+C + KL+
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVE---MQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 490 DANGLLNELLEKGLIPN 506
            A  L  E++E+G  PN
Sbjct: 630 KAFHLYFEMIERGFTPN 646



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 219/429 (51%), Gaps = 51/429 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK +++ CN L++   K G+  + E V+  M    ++ +  S+N +L+G C+ GK++KA
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+M   G++P VVTYN +I G      +G    A  ++  MVE G+ PNE++  T+
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVD---VGSYDDALHLWHLMVERGVTPNEISCCTM 478

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D F K  +   AM +++E+   G     V +N++I+GLC  GKL EA A+ D M   GL
Sbjct: 479 LDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGL 538

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T   L +G+CK   V++A  +   +  Q +S S+  YN+LID   K  ++ D   
Sbjct: 539 SPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTD 598

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  RG+ P+V TY  LI+G   E  ++   ++  E++  G    +V  + +V +L 
Sbjct: 599 LLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLY 658

Query: 446 KDGKSKKAVSLLDEM--------------------FKMEKEK------------KWPNIV 473
           +D +  +A  +LD+M                      +E +K               N +
Sbjct: 659 RDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI 718

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEM 517
            YN+ I G C+ GKL++A  +L+ L+ +G +P+  TY                  +R+EM
Sbjct: 719 VYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM 778

Query: 518 MEKGFIPDI 526
           +EKG IP+I
Sbjct: 779 LEKGLIPNI 787



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 218/430 (50%), Gaps = 58/430 (13%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           GD G+  +V++ N +++ LV  G ++D  +++  M  R +  N  S   +L+   K G  
Sbjct: 430 GD-GITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDS 488

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           ++A  + +++   G +   V +N +I G CK   +GK+ +A AVF  M E G+ P+E+T+
Sbjct: 489 DRAMMLWKEILGRGFTKSTVAFNTMISGLCK---MGKLMEAGAVFDRMKELGLSPDEITY 545

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            TL DG+CK+ N+  A ++   M    ++A +  YNSLI+GL    KL++   L  EM  
Sbjct: 546 RTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQT 605

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL PNVVT   LI+G+C ++ ++KA  L+ ++ E+G +P+V+  + ++ +  ++ R+ +
Sbjct: 606 RGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISE 665

Query: 383 AFAMRNSMLDRGVLP------------DVS-----------------------TYNCLIA 407
           A  + + MLD  +L             D++                        YN  I 
Sbjct: 666 ATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAID 725

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL + G ++  R++++ L++ G      TY  L+ A    G   +A  L DEM +   + 
Sbjct: 726 GLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE---KG 782

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI--------------- 512
             PNI  YN LI G C+ G ++ A  L  +L +KGL+PN  TY I               
Sbjct: 783 LIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKAS 842

Query: 513 -VREEMMEKG 521
            +RE+M E+G
Sbjct: 843 RLREKMTEEG 852



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 199/393 (50%), Gaps = 41/393 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  + +SC  +L    K G  +    ++KE+  R    +  +FN +++GLCK GKL +A
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + MK LG+SP  +TY  L DGYCK G + + ++   V   M    +  +   +N+L
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGV---MERQAMSASIEMYNSL 583

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  K   ++    +  EM + G++  VVTY +LI+G C + KLD+A  L  EM+  G 
Sbjct: 584 IDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGF 643

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDD-----------------------ISEQGLSP 362
            PNVV  + +++   +   + +A V+ D                        +  Q ++ 
Sbjct: 644 TPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIAD 703

Query: 363 SV------------ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           S+            I YN  ID  CK G++++A ++ + ++ RG LPD  TY  LI   S
Sbjct: 704 SLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACS 763

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             GNV+    + +E++  G+   +  YN L+  LCK G   +A  L    +K+ ++   P
Sbjct: 764 VSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF---YKLYQKGLVP 820

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           N VTYN+LI  +C+ G L+ A+ L  ++ E+G+
Sbjct: 821 NAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 73/328 (22%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F R  + GL    ++   L     K G  ++   +   M+R+ +  +++ +N +++GL 
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K  KLN  +D++ +M++ G+SP VVTY  LI G+C +    K+ KA  ++ +M+E G  P
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQ---KLDKAFHLYFEMIERGFTP 645

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA------------------------- 292
           N V  + ++    +D+ IS A  + ++M    I A                         
Sbjct: 646 NVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSL 705

Query: 293 ----------GVVTYNSLINGLCVDGKLDEAVA--------------------------- 315
                       + YN  I+GLC  GKLDEA +                           
Sbjct: 706 DKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVS 765

Query: 316 --------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
                   LRDEM+  GL PN+   NALING CK   +++A+ LF  + ++GL P+ +TY
Sbjct: 766 GNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTY 825

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           N LI  YC+ G ++ A  +R  M + G+
Sbjct: 826 NILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           HL FE  +R    G   +V+ C++++ +L ++ +  +   +  +M    I   L   N  
Sbjct: 633 HLYFEMIER----GFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNKC 685

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKV---VTYNILIDGYCKKGGIGKMYKADAVFKD 249
            + L K     +A  I + +    +   +   + YNI IDG CK G   K+ +A +V   
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSG---KLDEARSVLSV 742

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           ++  G LP+  T+ TLI       N+  A K+ +EM   G+   +  YN+LINGLC  G 
Sbjct: 743 LMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGN 802

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           +D A  L  ++   GL PN VT N LI  +C+   ++KA  L + ++E+G+S  +I
Sbjct: 803 IDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 5/177 (2%)

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           +F    E G    V  ++ L+ A+ + G  + A  + + M   G +P + + + L+  L 
Sbjct: 145 VFSVYKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLV 202

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           ++G       + +++V  G+   +   +I+V A C+ G+   A+ +L+   KM KE   P
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLE---KMVKEGLEP 259

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           N+VTYN L+ G+  +G  E    +L  + E+G+  N  T  ++     +KG + + E
Sbjct: 260 NVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAE 316


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 224/430 (52%), Gaps = 25/430 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++   M+M     + +        +     G+++ V++   L+R L    + +    + 
Sbjct: 114 NAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELL 173

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM    +  N+  ++ +L G C++G+    S + E+M  LGV P V+ +   ID  CKK
Sbjct: 174 GEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKK 233

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G IGK  K   +   MV+ G+ PN VT+N LI+  CK+ ++  A+ +  EM   G+A  V
Sbjct: 234 GRIGKAVKVKDI---MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDV 290

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKKKLVEKARVLF 352
           VTYN+LI GL    ++D A+ L +EM+     ++P+VVT N++I+G CK   + +A  + 
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + ++E+G   +++TYN LI  + +  ++  A  + + ++  G+ PD  TY+ LI G S+ 
Sbjct: 351 EMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKL 410

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
             V+     +  +   G+RA L  Y  L+ ALC+ G  ++A+ L +EM          + 
Sbjct: 411 WEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM----DMNCGLDA 466

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREE 516
           V Y+ ++ G C+ G ++ A  LL ++L++GL P+  TY I                V ++
Sbjct: 467 VAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQ 526

Query: 517 MMEKGFIPDI 526
           M   GF+PD+
Sbjct: 527 MAASGFVPDV 536



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 203/368 (55%), Gaps = 11/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V+  + LLR   + G+++DV  V++EM R  +E ++  F   ++ LCK G++ KA
Sbjct: 180 GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKA 239

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   G+ P VVTYN+LI+  CK+G +    +A A+  +M + G+ P+ VT+NTL
Sbjct: 240 VKVKDIMVQRGLEPNVVTYNVLINCLCKEGSV---REALALRNEMDDKGVAPDVVTYNTL 296

Query: 266 IDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           I G      +  AM + EEM  G   +   VVT+NS+I+GLC  G++ +A+++R+ M   
Sbjct: 297 IAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAER 356

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G   N+VT N LI GF +   V  A  L  ++   GL P   TY+ LI+ + K   ++ A
Sbjct: 357 GCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRA 416

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILVG 442
                +M  RG+  ++  Y  L+A L + G +E    + NE+ +N G+ A  V Y+ ++ 
Sbjct: 417 EMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDA--VAYSTMMY 474

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             CK G  K A  LL +M     E   P+ VTY++LI  F + G LE+A  +L ++   G
Sbjct: 475 GACKSGDIKAAKQLLQDMLD---EGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 503 LIPNQTTY 510
            +P+   +
Sbjct: 532 FVPDVAVF 539



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 184/353 (52%), Gaps = 48/353 (13%)

Query: 204 KASDIMEDMKSLGVSPKV---VTYNILIDGYCKKGGIGKMYKADAVFKDM---VENGILP 257
           +A+ + E    L   P V   V+YNI++   C++GG   + +A ++  DM         P
Sbjct: 56  RAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGG--DLRQALSLLADMSREAHPAARP 113

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N V++  ++ G C       A+ +   M + G+ A VVTY +LI GLC   +LD A+ L 
Sbjct: 114 NAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELL 173

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS--------------------- 356
            EM  SG+ PNV+  + L+ G+C+    +    +F+++S                     
Sbjct: 174 GEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKK 233

Query: 357 --------------EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                         ++GL P+V+TYN LI+  CKEG + +A A+RN M D+GV PDV TY
Sbjct: 234 GRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTY 293

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNG--MRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           N LIAGLS    ++G   ++ E++     +   +VT+N ++  LCK G+ ++A+S + EM
Sbjct: 294 NTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAIS-VREM 352

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             M +     N+VTYN LI GF +  K+  A  L++EL+  GL P+  TY I+
Sbjct: 353 --MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSIL 403



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 26/247 (10%)

Query: 295 VTYNSLINGLCV-DGKLDEAVALRDEM---MASGLKPNVVTSNALINGFCKKKLVEKARV 350
           V+YN ++  LC   G L +A++L  +M        +PN V+   ++ G C  +  ++A  
Sbjct: 77  VSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVA 136

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L   +   G+   V+TY TLI   C    ++ A  +   M   GV P+V  Y+CL+ G  
Sbjct: 137 LLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYC 196

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R G  + V  +  E+   G+   ++ +   +  LCK G+  KAV + D M +   E   P
Sbjct: 197 RSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE---P 253

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           N+VTYNVLI   C++G + +A  L                   R EM +KG  PD+  + 
Sbjct: 254 NVVTYNVLINCLCKEGSVREALAL-------------------RNEMDDKGVAPDVVTYN 294

Query: 531 YNISGTS 537
             I+G S
Sbjct: 295 TLIAGLS 301



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 137/271 (50%), Gaps = 7/271 (2%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           GD  ++  V++ N ++  L K G+      V + M  R    NL ++N+++ G  +  K+
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           N A ++M ++ S G+ P   TY+ILI+G+ K   + ++ +A+   + M + GI      +
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILINGFSK---LWEVDRAEMFLRTMTQRGIRAELFHY 435

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
             L+   C+   +  AM +F EM  + G+ A  V Y++++ G C  G +  A  L  +M+
Sbjct: 436 IPLLAALCQLGMMEQAMVLFNEMDMNCGLDA--VAYSTMMYGACKSGDIKAAKQLLQDML 493

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL P+ VT + LIN F K   +E+A  +   ++  G  P V  +++LI  Y  EG++ 
Sbjct: 494 DEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQIN 553

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
               + + M  + V  D   + C +  L ++
Sbjct: 554 KILDLIHEMRAKNVAID-PKFICTLVRLPQQ 583


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 206/393 (52%), Gaps = 22/393 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    + + N  L  L ++ + E    ++  M  +  + ++ S+  +++ LC A + ++A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +   +   G+SP       L+ G C  G +   Y+   +   +++ G+  N + +N L
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYE---LVVGVIKGGVKVNSLVYNAL 230

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDGFC+   +  AMK+   M   G    +VTYN L+N  C +G +DEAV L + M  SG+
Sbjct: 231 IDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P++ + N L+ GFCK  +V++A ++  +  +      V++YNT+I A+CK  R    + 
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYE 350

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G+ PD+ T+N LI    REG+   V+ +++E+    +    + Y  +V  LC
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK   A S+  +M +       P++++YN L+ GFC+  ++ DA  L +E+  KGL P
Sbjct: 411 KNGKVDVAHSVFRDMVENGVN---PDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467

Query: 506 NQTTYQI----------------VREEMMEKGF 522
           ++ TY++                V ++MME+GF
Sbjct: 468 DEVTYKLIVGGLIRGKKISLACRVWDQMMERGF 500



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 204/407 (50%), Gaps = 20/407 (4%)

Query: 115 NSIIIDMLMLAYVKNM--------------KPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +S+++DM  L +V ++              +     E F      G    V+S   ++ A
Sbjct: 104 HSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDA 163

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L    +F++   V++ +  + +  +  +   ++ GLC  G+++ A +++  +   GV   
Sbjct: 164 LCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVN 223

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
            + YN LIDG+C+ G + K  K  A    M   G +P+ VT+N L++  C++  +  A++
Sbjct: 224 SLVYNALIDGFCRMGRVDKAMKIKAF---MSRTGCVPDLVTYNILLNYCCEEGMVDEAVR 280

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + E M   G+   + +YN L+ G C    +D A  +  E M +    +VV+ N +I  FC
Sbjct: 281 LVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFC 340

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K +   K   LF+++  +G+ P ++T+N LIDA+ +EG       + + M    VLPD  
Sbjct: 341 KARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCI 400

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            Y  ++  L + G V+   ++  ++V NG+   +++YN L+   CK  +   A+ L DE 
Sbjct: 401 FYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDE- 459

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
             M+ +  +P+ VTY +++ G  +  K+  A  + ++++E+G   N+
Sbjct: 460 --MQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNR 504



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 166/362 (45%), Gaps = 4/362 (1%)

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME-DMKSLGVSP 219
           LVK G      Y++ +M      +    +N  +  L +  +L+ A       +   G S 
Sbjct: 20  LVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSL 79

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
              TY+  I   C       +    ++  DM   G +P+   FNT ++  C+   +  A+
Sbjct: 80  LPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETAL 139

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           ++F  M S G    VV+Y  +I+ LC   + DEA  +   ++  GL P+     AL+ G 
Sbjct: 140 ELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGL 199

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C    V+ A  L   + + G+  + + YN LID +C+ GR++ A  ++  M   G +PD+
Sbjct: 200 CSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDL 259

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TYN L+     EG V+    ++  +  +G+   L +YN L+   CK     +A  ++ E
Sbjct: 260 VTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVE 319

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
                + K   ++V+YN +I  FC+  +      L  E+  KG+ P+  T+ I+ +  + 
Sbjct: 320 RM---QTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376

Query: 520 KG 521
           +G
Sbjct: 377 EG 378



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           ++ A+ K  +   G+E F+     G++  +++ N L+ A ++EG    V+ +  EM + R
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +   +  V++ LCK GK++ A  +  DM   GV+P V++YN L++G+CK     ++ 
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT---SRVM 451

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +F +M   G+ P+EVT+  ++ G  + + IS A +V+++M   G         +L+
Sbjct: 452 DAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511

Query: 302 NGL 304
           N +
Sbjct: 512 NAI 514



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 124/294 (42%), Gaps = 46/294 (15%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE-EMGSHGIAAGVVT 296
           G + +A  +F  M E+      V +N  I    +   +  A   +   +   G +    T
Sbjct: 24  GLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFT 83

Query: 297 YNSLINGLC-----VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
           Y+  I+ LC     ++  L  ++ L  +M + G  P++   N  +N  C++  +E A  L
Sbjct: 84  YSRFISALCSAPNNINLPLIHSLLL--DMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  +  +G  P V++Y  +IDA C   R ++A  +   ++D+G+ PD      L+ GL  
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G V+                  + Y ++VG +      K  V +              N
Sbjct: 202 GGRVD------------------LAYELVVGVI------KGGVKV--------------N 223

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            + YN LI GFC+ G+++ A  +   +   G +P+  TY I+     E+G + +
Sbjct: 224 SLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDE 277


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 208/392 (53%), Gaps = 10/392 (2%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM----KRRRIELNLDSFNFVL 193
           A +R    G   +  S N LL+ L  E + +   ++   M     R     ++ S+  V+
Sbjct: 154 ALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVI 213

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGL + G+L+KA  + ++M   G+SP  +TYN L+ GYC  G   K  +A  +F+ M  +
Sbjct: 214 NGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSG---KPKEAIGIFRKMCRD 270

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+ VT+NTL+   CK+     A KVF+ M   G       Y +L++G   +G L + 
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQM 330

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             L D M+ +G +P+    N LI  + K  +V++A + F  + +QGL P+++TY T++DA
Sbjct: 331 HQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDA 390

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ G+++DA +  + ++  G+ P+   +  LI GL      +    +  E++  G+   
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            + +N L+  LCK+G   +A ++ D M +++ +    +++TY  LI G+C  GK+++A  
Sbjct: 451 TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ---CDVITYTTLIDGYCLDGKVDEATK 507

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           LL  ++  G+ PN+ TY  +     + G I D
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIED 539



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 243/519 (46%), Gaps = 57/519 (10%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKY----PKIRSF---LHMFVKNGKFTS 97
           ++L+  C   +  +A H       LLH+++         P + S+   ++  ++ G+   
Sbjct: 172 ILLKGLCDENRSQQALH-------LLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224

Query: 98  VSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQL 157
              +F  +      +  N I  + L+  Y  + KP      F++    G++  V++ N L
Sbjct: 225 AYCLFDEM--LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTL 282

Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
           +  L K G+  +   V+  M ++  + +   +  +L+G    G L +   +++ M   G 
Sbjct: 283 MVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGT 342

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            P    +NILI  Y K G + +   A   F  M + G+ PN VT+ T++D  C+   +  
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLA---FSKMRQQGLHPNIVTYGTVMDALCRVGKVDD 399

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           AM  F+ + S G+    V + +LI+GLC   K D+A  L  EM+  G+ PN +  N L+N
Sbjct: 400 AMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLN 459

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             CK+ +V +A+ +FD +    +   VITY TLID YC +G++++A  +   M+  GV P
Sbjct: 460 HLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKP 519

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           +  TYN +I G  + G +E   ++  ++ + G+  G+V Y+ ++  L +  +   A  L 
Sbjct: 520 NEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELY 579

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQK-------------------------------- 485
             M K     K P I TYN++++G CQ                                 
Sbjct: 580 LWMIKCGI--KLP-IGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDAL 636

Query: 486 ---GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              G+ ++A  L   LL +GL+PN  TY ++ + ++E+G
Sbjct: 637 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 188/369 (50%), Gaps = 14/369 (3%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           +S+   N  L A+ +E     +  ++  M R     +L +++ V+    +AG L+ A   
Sbjct: 64  TSIFDLNSALSAVARESPAVALS-LFNRMPRA----DLCTYSIVIGCCSRAGHLDLAFAA 118

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +  +   G + + +T++ L+ G C           D   + M   G  PN  ++N L+ G
Sbjct: 119 LGRVIRTGWTAQAITFSPLLKGLCHDKRTSD--AMDIALRRMPALGCTPNAFSYNILLKG 176

Query: 269 FCKDENISAAMKVFEEMGSH----GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
            C +     A+ +   M +     G    VV+Y ++INGL  +G+LD+A  L DEM+  G
Sbjct: 177 LCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQG 236

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PN +T N L++G+C     ++A  +F  +   G+ P V+TYNTL+   CK GR  +A 
Sbjct: 237 MSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEAR 296

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + +SM+ +G  PD S Y  L+ G + EG +  +  +++ +V NG +     +NIL+GA 
Sbjct: 297 KVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAY 356

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            K G   +A+       KM ++   PNIVTY  ++   C+ GK++DA    + L+ +GL 
Sbjct: 357 AKHGMVDEAMLAFS---KMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLT 413

Query: 505 PNQTTYQIV 513
           PN   ++ +
Sbjct: 414 PNGVVFRTL 422



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 201/395 (50%), Gaps = 6/395 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D G+  + ++ N LL      GK ++   ++++M R  +E ++ ++N ++  LCK
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+  +A  + + M   G  P    Y  L+ GY  +G + +M++   +   MV NG  P+
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ---LLDVMVRNGTQPD 345

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
              FN LI  + K   +  AM  F +M   G+   +VTY ++++ LC  GK+D+A++  D
Sbjct: 346 HYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFD 405

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +++ GL PN V    LI+G C     +KA  L  ++  +G+ P+ I +NTL++  CKEG
Sbjct: 406 RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  A  + + M+   V  DV TY  LI G   +G V+    ++  +V +G++   VTYN
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            ++   CK+G+ + A SL  +M     +   P IV Y+ ++ G  Q  ++  A  L   +
Sbjct: 526 TIINGYCKNGRIEDACSLFRQM---ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           ++ G+     TY I+ + + +     D     +N+
Sbjct: 583 IKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL 617



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 183/356 (51%), Gaps = 20/356 (5%)

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           T  D+LCR   + D +                F R    GL  + +    L+  L    K
Sbjct: 386 TVMDALCRVGKVDDAM--------------SQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           ++  E +  EM  R I  N   FN +LN LCK G + +A +I + M  + V   V+TY  
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LIDGYC  G   K+ +A  + + MV +G+ PNEVT+NT+I+G+CK+  I  A  +F +M 
Sbjct: 492 LIDGYCLDG---KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA 548

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S G+  G+V Y+++++GL    ++  A  L   M+  G+K  + T N ++ G C+    +
Sbjct: 549 SKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTD 608

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  +F ++          T+N +IDA  K GR ++A  +  S+L RG++P+V TY  ++
Sbjct: 609 DALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 668

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
             L  +G +E + ++   L  NG  A     N LVG L + G+ +KA   +S +DE
Sbjct: 669 KSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDE 724



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 3/226 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K + ++ N ++    K G+ ED   ++++M  + +   +  ++ +L+GL +  ++  A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M   G+   + TYNI++ G C+        +   +F ++          TFN +
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALR---MFHNLCLIDFHLQNRTFNIM 632

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID   K      A  +F  + + G+   VVTY  ++  L   G L+E   L   +  +G 
Sbjct: 633 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 692

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
             +    NAL+    +K  V KA V    I E   S    T  +L+
Sbjct: 693 TADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 17/184 (9%)

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LFD++  +  + S+   N+ + A  +E     A A+  S+ +R    D+ TY+ +I 
Sbjct: 51  AHHLFDELLRRD-TTSIFDLNSALSAVARE---SPAVAL--SLFNRMPRADLCTYSIVIG 104

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
             SR G+++     +  ++  G  A  +T++ L+  LC D ++  A+ +   + +M    
Sbjct: 105 CCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDI--ALRRMPALG 162

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELL----EKGLIPNQTTYQIV-----REEMM 518
             PN  +YN+L+KG C + + + A  LL+ ++      G  P+  +Y  V     RE  +
Sbjct: 163 CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQL 222

Query: 519 EKGF 522
           +K +
Sbjct: 223 DKAY 226


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 198/369 (53%), Gaps = 15/369 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K G+  +    Y +M  R    NL   N +L  LC+AGK+++A   M   + + 
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQA---MAIFRGIQ 65

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENI 275
            SP V+T NILI+G+C+   +  + KA  +F +M +N  ++P   T+  +I  +CK + +
Sbjct: 66  CSPSVITLNILINGFCE---LQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNA 334
             A ++ EE  S   ++ V+   S+  G C   ++DEA  L  +M+     KP++V  N 
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN--SMLD 392
           +I+GFCK   V +A  + + +   G  P+ +TY TLID +CK G + +A  +    S  D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
               P+V T+N LI+GL +   +E    ++ ++    +RA   TY  L+  LCK G++ +
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
              + +EM +   E   P++VTY  L+   C+ G L+DA  ++  ++ KG+ P+ TTY +
Sbjct: 301 VSRVFEEMLR---EGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357

Query: 513 VREEMMEKG 521
           + E + E G
Sbjct: 358 LLEGLFENG 366



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 168/299 (56%), Gaps = 9/299 (3%)

Query: 192 VLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           V  G CKA ++++A  ++ DM +     P +V +N++I G+CK G + + Y+   + + +
Sbjct: 145 VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYE---MLETL 201

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS--HGIAAGVVTYNSLINGLCVDG 308
           V  G +PN VT+ TLIDGFCK  N+S A+++F+ + S  H     VVT+N+LI+GLC   
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L+ A  L  +M A  L+ +  T   L++G CK+    +   +F+++  +G +PSV+TY 
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+ A+CK G ++DA  +  SM+ +G+ PDV+TY  L+ GL   G V        +++  
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE 381

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 V Y+ LV   CK     +AV    EM      +  P+  T  +L++  C++G+
Sbjct: 382 RCPPCAVVYSALVRGCCKAALVDEAVKYYVEML---DRRLAPDPATCKLLVEMLCKRGR 437



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 195/401 (48%), Gaps = 40/401 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-K 213
           N LL +L + GK +    +++ ++      ++ + N ++NG C+   L+KA ++  +M K
Sbjct: 42  NLLLASLCQAGKMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEK 98

Query: 214 SLGVSPKVVTYNILIDGYCK---------------------------KGGIGKMYKADAV 246
           +  + P+  TY  +I  YCK                             G  K  + D  
Sbjct: 99  NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEA 158

Query: 247 FK---DMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           ++   DMVE     P+ V +N +I GFCK   +  A ++ E + S G     VTY +LI+
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 303 GLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           G C  G L EA+ L   + +     +PNVVT NALI+G CK   +E A  L   +  + L
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
                TY TL+D  CK+GR  +   +   ML  G  P V TY  L+    + G+++  + 
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQ 338

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++  +V  G+   + TY +L+  L ++GK + A    +   K+ +E+  P  V Y+ L++
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE---KILRERCPPCAVVYSALVR 395

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C+   +++A     E+L++ L P+  T +++ E + ++G
Sbjct: 396 GCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 33/372 (8%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F+ ++ GLCKAG+L +A +    M      P +   N+L+   C+ G   KM +A 
Sbjct: 2   NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAG---KMDQAM 58

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLING 303
           A+F+ +      P+ +T N LI+GFC+ + +  A+++F EM  +  +     TY ++I  
Sbjct: 59  AIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGLSP 362
            C   +LD+A  L +E  +S    +V+   ++  GFCK + V++A ++L D + ++   P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            ++ +N +I  +CK GR+ +A+ M  +++  G +P+  TY  LI G  + GN+     + 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 423 NELVNNGMRA--GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
             L +    A   +VT+N L+  LCK  + + A  L+ +M   +      +  TY  L+ 
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM---KARDLRADTFTYTTLMD 290

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFI 523
           G C++G+  + + +  E+L +G  P+  TY                 Q++R  M+ KG  
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR-SMVAKGIP 349

Query: 524 PDIEGHMYNISG 535
           PD+  +   + G
Sbjct: 350 PDVTTYTVLLEG 361



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 39/305 (12%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  TF+ LI G CK   +  A++ + +M        +   N L+  LC  GK+D+A+A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAY- 374
              +  S   P+V+T N LINGFC+ +L++KA  LF ++ +   L P   TY  +I  Y 
Sbjct: 61  FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 375 --------------------------------CKEGRMEDAFAMRNSMLD-RGVLPDVST 401
                                           CK  R+++A+ +   M++ +   PD+  
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N +I G  + G V     ++  LV+ G     VTY  L+   CK G   +A+ L  ++ 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF-KVL 236

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                   PN+VT+N LI G C+  +LE A  L+ ++  + L  +  TY  + + + ++G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 522 FIPDI 526
              ++
Sbjct: 297 RTSEV 301


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 203/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V + N ++  L KEG+  +   ++  MK      ++ +FN +++G  K G+L++   ++
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           E+M+  G    VVTYN LI+ +CK    G+M  A   F  M   G++ N VTF+T +D F
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCK---FGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  +  AMK+F +M   G+A    TY  LI+G C  G+LD+A+ L DEM+  G+  NV
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   L++G CK++ V +A  +   + + G+  + + Y TLI  +      E A  + + 
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M ++G+  D+S Y  LI GL     ++  ++++ ++  +G+    + Y  ++ A  K GK
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+++L    K+      PN++TY  LI G C+ G +++A    N++ + GL PN   
Sbjct: 484 VPEAIAMLQ---KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 510 YQIVREEMMEKG 521
           Y  + + + + G
Sbjct: 541 YTALVDGLCKNG 552



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 208/402 (51%), Gaps = 18/402 (4%)

Query: 131 KPHLG---FEAFKRAG-DYGLKSSVLS--CNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           +PHL     +   RA    G + S L+   + LL  L   G  +D       ++  R+  
Sbjct: 96  RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  + N +L  L +    +++  ++  +     +P V T+NI+ID  CK+G   ++ +A 
Sbjct: 156 NTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEG---ELAEAR 208

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++F  M E G LP+ VTFN+LIDG+ K   +    ++ EEM   G  A VVTYN+LIN  
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+++ A      M   G+  NVVT +  ++ FCK+ LV +A  LF  +  +G++ + 
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  LID  CK GR++DA  + + M+ +GV  +V TY  L+ GL +E  V    +++  
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFC 483
           +   G+RA  + Y  L+     +  S+KA+ LL EM    K K    +I  Y  LI+G C
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM----KNKGLELDISLYGALIQGLC 444

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              KL++A  LL ++ E GL PN   Y  + +   + G +P+
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 222/446 (49%), Gaps = 21/446 (4%)

Query: 66  TGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFH---ALSTCSDSLCRNSIII 119
           +GRL+  L      P + +F   +    K G+     ++F     +    D +  NS+I 
Sbjct: 172 SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                  +  ++  +  E  +R+G    K+ V++ N L+    K G+ E     +  MKR
Sbjct: 232 GYGKCGELDEVEQLV--EEMRRSG---CKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             +  N+ +F+  ++  CK G + +A  +   M+  G++    TY  LIDG CK G   +
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG---R 343

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +  A  +  +MV  G+  N VT+  L+DG CK+  ++ A  V   M   G+ A  + Y +
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G  ++   ++A+ L  EM   GL+ ++    ALI G C    +++A+ L   + E G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P+ I Y T++DA  K G++ +A AM   +LD G  P+V TY  LI GL + G+++   
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--MEKEKKWPNIVTYNV 477
           +  N++ + G+   +  Y  LV  LCK+G   +AV L +EM    M  +K     V Y  
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK-----VVYTA 578

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGL 503
           L+ G+ ++G L DA  L  ++++ GL
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 201/393 (51%), Gaps = 10/393 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            A  R  +  +  +  +CN +L  L ++     V  +++++       N+ +FN V++ L
Sbjct: 143 RAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP----NVFTFNIVIDFL 198

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+L +A  +   MK +G  P VVT+N LIDGY   G  G++ + + + ++M  +G  
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY---GKCGELDEVEQLVEEMRRSGCK 255

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+N LI+ FCK   +  A   F  M   G+ A VVT+++ ++  C +G + EA+ L
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M   G+  N  T   LI+G CK   ++ A VL D++  QG+  +V+TY  L+D  CK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           E ++ +A  +   M   GV  +   Y  LI G     N E    +++E+ N G+   +  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+  LC   K  +A SLL    KM++    PN + Y  ++    + GK+ +A  +L 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLT---KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           ++L+ G  PN  TY  + + + + G I +   H
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 38/395 (9%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F A KR G   + ++V++ +  + A  KEG   +   ++ +M+ R + LN  ++  +++G
Sbjct: 281 FAAMKREG---VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDG 337

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            CKAG+L+ A  ++++M   GV   VVTY +L+DG CK+    K+ +A+ V + M + G+
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER---KVAEAEDVLRMMEKAGV 394

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             NE+ + TLI G   ++N   A+ +  EM + G+   +  Y +LI GLC   KLDEA +
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L  +M  SGL+PN +    +++   K   V +A  +   I + G  P+VITY  LID  C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G +++A +  N M D G+ P+V  Y  L+ GL + G +     + NE+V+ GM    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM---------------------FKMEKEKK------ 468
            Y  L+    K G    A +L  +M                       M  E +      
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 469 -----WPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
                 P+   YN LI  + + G LE+A  L +E+
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 197/409 (48%), Gaps = 34/409 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K G+  +    F A+    + +  N +     + A+ K        + F +  
Sbjct: 263 ALINCFCKFGRMETAYGYFAAMK--REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+  +  +   L+    K G+ +D   +  EM R+ + LN+ ++  +++GLCK  K+ 
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYC----------------KKG------------ 235
           +A D++  M+  GV    + Y  LI G+                  KG            
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 236 ----GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                + K+ +A ++   M E+G+ PN + + T++D   K   +  A+ + +++   G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY +LI+GLC  G +DEA++  ++M   GL PNV    AL++G CK   + +A  L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+++  +G+S   + Y  L+D Y K+G + DAFA++  M+D G+  D+  Y C I+G   
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
              +   R + +E++ +G+      YN L+    K G  ++A+SL DEM
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 203/372 (54%), Gaps = 6/372 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V + N ++  L KEG+  +   ++  MK      ++ +FN +++G  K G+L++   ++
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           E+M+  G    VVTYN LI+ +CK    G+M  A   F  M   G++ N VTF+T +D F
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCK---FGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  +  AMK+F +M   G+A    TY  LI+G C  G+LD+A+ L DEM+  G+  NV
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   L++G CK++ V +A  +   + + G+  + + Y TLI  +      E A  + + 
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M ++G+  D+S Y  LI GL     ++  ++++ ++  +G+    + Y  ++ A  K GK
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+++L    K+      PN++TY  LI G C+ G +++A    N++ + GL PN   
Sbjct: 484 VPEAIAMLQ---KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 510 YQIVREEMMEKG 521
           Y  + + + + G
Sbjct: 541 YTALVDGLCKNG 552



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 208/402 (51%), Gaps = 18/402 (4%)

Query: 131 KPHLG---FEAFKRAG-DYGLKSSVLS--CNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           +PHL     +   RA    G + S L+   + LL  L   G  +D       ++  R+  
Sbjct: 96  RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  + N +L  L +    +++  ++  +     +P V T+NI+ID  CK+G   ++ +A 
Sbjct: 156 NTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEG---ELAEAR 208

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           ++F  M E G LP+ VTFN+LIDG+ K   +    ++ EEM   G  A VVTYN+LIN  
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+++ A      M   G+  NVVT +  ++ FCK+ LV +A  LF  +  +G++ + 
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  LID  CK GR++DA  + + M+ +GV  +V TY  L+ GL +E  V    +++  
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFC 483
           +   G+RA  + Y  L+     +  S+KA+ LL EM    K K    +I  Y  LI+G C
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM----KNKGLELDISLYGALIQGLC 444

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              KL++A  LL ++ E GL PN   Y  + +   + G +P+
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 222/446 (49%), Gaps = 21/446 (4%)

Query: 66  TGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFH---ALSTCSDSLCRNSIII 119
           +GRL+  L      P + +F   +    K G+     ++F     +    D +  NS+I 
Sbjct: 172 SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
                  +  ++  +  E  +R+G    K+ V++ N L+    K G+ E     +  MKR
Sbjct: 232 GYGKCGELDEVEQLV--EEMRRSG---CKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             +  N+ +F+  ++  CK G + +A  +   M+  G++    TY  LIDG CK G   +
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG---R 343

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           +  A  +  +MV  G+  N VT+  L+DG CK+  ++ A  V   M   G+ A  + Y +
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G  ++   ++A+ L  EM   GL+ ++    ALI G C    +++A+ L   + E G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P+ I Y T++DA  K G++ +A AM   +LD G  P+V TY  LI GL + G+++   
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--MEKEKKWPNIVTYNV 477
           +  N++ + G+   +  Y  LV  LCK+G   +AV L +EM    M  +K     V Y  
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK-----VVYTA 578

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGL 503
           L+ G+ ++G L DA  L  ++++ GL
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 201/393 (51%), Gaps = 10/393 (2%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
            A  R  +  +  +  +CN +L  L ++     V  +++++       N+ +FN V++ L
Sbjct: 143 RAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP----NVFTFNIVIDFL 198

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+L +A  +   MK +G  P VVT+N LIDGY   G  G++ + + + ++M  +G  
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY---GKCGELDEVEQLVEEMRRSGCK 255

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + VT+N LI+ FCK   +  A   F  M   G+ A VVT+++ ++  C +G + EA+ L
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M   G+  N  T   LI+G CK   ++ A VL D++  QG+  +V+TY  L+D  CK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           E ++ +A  +   M   GV  +   Y  LI G     N E    +++E+ N G+   +  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+  LC   K  +A SLL    KM++    PN + Y  ++    + GK+ +A  +L 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLT---KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           ++L+ G  PN  TY  + + + + G I +   H
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 38/395 (9%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F A KR G   + ++V++ +  + A  KEG   +   ++ +M+ R + LN  ++  +++G
Sbjct: 281 FAAMKREG---VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDG 337

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            CKAG+L+ A  ++++M   GV   VVTY +L+DG CK+    K+ +A+ V + M + G+
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER---KVAEAEDVLRMMEKAGV 394

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             NE+ + TLI G   ++N   A+ +  EM + G+   +  Y +LI GLC   KLDEA +
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L  +M  SGL+PN +    +++   K   V +A  +   I + G  P+VITY  LID  C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G +++A +  N M D G+ P+V  Y  L+ GL + G +     + NE+V+ GM    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 436 TYNILVGALCKDGKSKKAVSLLDEM---------------------FKMEKEKK------ 468
            Y  L+    K G    A +L  +M                       M  E +      
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 469 -----WPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
                 P+   YN LI  + + G LE+A  L +E+
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 197/409 (48%), Gaps = 34/409 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K G+  +    F A+    + +  N +     + A+ K        + F +  
Sbjct: 263 ALINCFCKFGRMETAYGYFAAMK--REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+  +  +   L+    K G+ +D   +  EM R+ + LN+ ++  +++GLCK  K+ 
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYC----------------KKG------------ 235
           +A D++  M+  GV    + Y  LI G+                  KG            
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 236 ----GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                + K+ +A ++   M E+G+ PN + + T++D   K   +  A+ + +++   G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY +LI+GLC  G +DEA++  ++M   GL PNV    AL++G CK   + +A  L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+++  +G+S   + Y  L+D Y K+G + DAFA++  M+D G+  D+  Y C I+G   
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
              +   R + +E++ +G+      YN L+    K G  ++A+SL DEM
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 234/474 (49%), Gaps = 38/474 (8%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           S+   G++L SLV A  Y  + S       NG                  L  N + + +
Sbjct: 11  SIFEFGKILGSLVKANHYSIVVSLHRQMEFNG------------------LASNLVTLSI 52

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y +  +  L F  F      G  S  ++   L++ L  +G+     + + ++  + 
Sbjct: 53  LINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQG 112

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            +LN  S+  ++NGLCK G+   A + +  +    V P VV YN +IDG CK   +   +
Sbjct: 113 FKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAF 172

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
               ++ +MV   I P+ VT+NTLI G C    +  A+ +  +M    I   V T++ LI
Sbjct: 173 N---LYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILI 229

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING-----FCKK---------KLVEK 347
           +  C +GK+ EA  +   MM   +KPN+VT N+L++G       KK         K+V++
Sbjct: 230 DAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDE 289

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  LF+++  + + P ++ YN+LID  CK GR   A      M  RG  PD+ TYN L+ 
Sbjct: 290 AMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLD 349

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
            L +  +V+    ++ +L + G++  + TYNIL+  LCK G+ K A  + +++     + 
Sbjct: 350 ALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLV---KG 406

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              ++ TYN +IKGFC+KG  ++   +++++ + G  P+    +I+   + +KG
Sbjct: 407 YNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKG 460



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 209/391 (53%), Gaps = 20/391 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL S++++ + L+    + G+      V+  + ++    +  +F  ++ GLC  G+++KA
Sbjct: 42  GLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKA 101

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
               + + + G     V+Y  LI+G CK   +G+   A    + +    + P+ V +NT+
Sbjct: 102 LHFHDKVVAQGFKLNQVSYGTLINGLCK---VGQTRAALEFLRRIDGKLVQPDVVMYNTI 158

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG CKD+ ++ A  ++ EM +  I   VVTYN+LI GLC+  +L +A+ L  +M+   +
Sbjct: 159 IDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDI 218

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P V T + LI+ FCK+  +++A+ +F  + ++ + P+++TYN+L+D +     ++ A +
Sbjct: 219 NPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKS 278

Query: 386 MRNSMLD--------------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + N+M+               + + PD+  YN LI GL + G        + E+   G  
Sbjct: 279 IFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQP 338

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             + TYN L+ ALCK+    KA+ LL    K++ +   P++ TYN+LI G C+ G+L+DA
Sbjct: 339 PDIFTYNSLLDALCKNYHVDKAIELLT---KLKDQGIQPSVCTYNILINGLCKSGRLKDA 395

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
             +  +LL KG   +  TY  + +   +KG 
Sbjct: 396 EKVFEDLLVKGYNTDVYTYNAMIKGFCKKGL 426



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 202/392 (51%), Gaps = 20/392 (5%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S+    ++L +LVK   +  V  ++++M+   +  NL + + ++N   + G+   +  + 
Sbjct: 11  SIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVF 70

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            ++   G     +T+  LI G C KG I   +KA      +V  G   N+V++ TLI+G 
Sbjct: 71  ANILKKGYGSDAITFTTLIKGLCLKGEI---HKALHFHDKVVAQGFKLNQVSYGTLINGL 127

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK     AA++    +    +   VV YN++I+GLC D  +++A  L  EM+A  + P+V
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N LI G C    ++ A  L   +  + ++P+V T++ LIDA+CKEG+M++A  +   
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAV 247

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN---ELVNNGMR-----------AGLV 435
           M+   V P++ TYN L+ G      V+  ++I N   ++V+  M              +V
Sbjct: 248 MMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMV 307

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            YN L+  LCK G++  A+  + EM       + P+I TYN L+   C+   ++ A  LL
Sbjct: 308 IYNSLIDGLCKSGRTPYALKFIGEM---HYRGQPPDIFTYNSLLDALCKNYHVDKAIELL 364

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            +L ++G+ P+  TY I+   + + G + D E
Sbjct: 365 TKLKDQGIQPSVCTYNILINGLCKSGRLKDAE 396



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 182/350 (52%), Gaps = 17/350 (4%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +R     ++  V+  N ++  L K+    D   +Y EM  +RI  ++ ++N ++ 
Sbjct: 136 ALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLIC 195

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           GLC   +L  A  ++  M    ++P V T++ILID +CK+G   KM +A  VF  M++  
Sbjct: 196 GLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEG---KMKEAKNVFAVMMKED 252

Query: 255 ILPNEVTFNTLIDGF--------------CKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           + PN VT+N+L+DG                  + +  AM +FEEM    I   +V YNSL
Sbjct: 253 VKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSL 312

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+GLC  G+   A+    EM   G  P++ T N+L++  CK   V+KA  L   + +QG+
Sbjct: 313 IDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGI 372

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV TYN LI+  CK GR++DA  +   +L +G   DV TYN +I G  ++G  +    
Sbjct: 373 QPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLA 432

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           +++++ ++G         I++ +L   G++ KA    + + + +  ++ P
Sbjct: 433 MVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCHREAP 482


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 223/442 (50%), Gaps = 16/442 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S LH +  +GK      +F  +  C D +  +    + LM    KN +     + F    
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRM--CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G K +  +   LL     EG    + ++   M R  I+ +   FN ++    K GK++
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +   M+  G++P  VTY I++D  C    +GK+  A A F  ++  G+ P+ V F 
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCM---VGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G C  +    A ++  EM   GI    + +N+L+N LC +G +  A  + D M+  
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            ++ +V+T N LI+G+C    V++A  L + +   G+ P+ +TYNT+I+ YCK GR+EDA
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F++   M  +GV P + TY+ ++ GL +       + +   ++ +G++  + TYNI++  
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLG 632

Query: 444 LCKDGKSKKAVSLLDEM----FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LC++  +  A+ +   +    F +E         T+N++I    + G+ ++A  L   LL
Sbjct: 633 LCQNNCTDDALRIFQNLYLIDFHLENR-------TFNIMIDALLKGGRHDEAKDLFASLL 685

Query: 500 EKGLIPNQTTYQIVREEMMEKG 521
            +GL+PN  TY ++ + ++E+G
Sbjct: 686 ARGLVPNVVTYWLMMKSLIEQG 707



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 47/429 (10%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-----KRRRIELNLDSFNFV 192
           A +R    G   +V S   LL+ L  E + +   ++   M      R     ++ S+N V
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 193 LNGLCKAGK-LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +NGL + G+ L+ A  + + M   G+SP VVTYN +I    K      M KA  V   MV
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARA---MDKAAVVLVRMV 265

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +NG +PN +T N+L+ G+C     + A+ VF+ M   G+   V TYN+L+  LC +G+  
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFC------------------------------- 340
           EA  + D M+  G KPN  T   L++G+                                
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 341 ----KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
               K   V+ A +LF  +  QGL+P  +TY  ++DA C  G+++DA A    ++  G+ 
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD   +  LI GL      +    +  E++  G+    + +N L+  LCK+G   +A ++
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNI 505

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            D M +++ ++   +++TYN LI G+C  GK+++A  LL  ++  G+ PN+ TY  +   
Sbjct: 506 FDLMVRVDVQR---DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMING 562

Query: 517 MMEKGFIPD 525
             + G I D
Sbjct: 563 YCKNGRIED 571



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +  F +  D GL   V++ N ++ AL K    +    V   M +     N  + N +L+
Sbjct: 222 AYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C +GK N A  + + M   GV P V TYN L+   CK    G+  +A  +F  MV+ G
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN---GRSMEARKIFDSMVKRG 338

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  T+ TL+ G+  + ++     + + M  +GI      +N LI      GK+D+A+
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +M   GL P+ VT   +++  C    V+ A   F  +  +GL+P  + +  LI   
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C   + + A  +   M+ RG+ P+   +N L+  L +EG V   +NI + +V   ++  +
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +TYN L+   C  GK  +A  LL+ M  ++  K  PN VTYN +I G+C+ G++EDA  L
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMV-LDGVK--PNEVTYNTMINGYCKNGRIEDAFSL 575

Query: 495 LNELLEKGLIPNQTTYQIVREEMME 519
             ++  KG+ P   TY  + + + +
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQ 600



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 194/367 (52%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+    K GK +D   ++ +M+R+ +  +  ++  V++ LC  GK++ A      + S
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P  V +  LI G C +    K  KA+ +  +M+  GI PN + FNTL++  CK+  
Sbjct: 442 EGLTPDAVVFRNLIHGLCARD---KWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGM 498

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           ++ A  +F+ M    +   V+TYN+LI+G C+ GK+DEA  L + M+  G+KPN VT N 
Sbjct: 499 VARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNT 558

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +ING+CK   +E A  LF  ++ +G++P ++TY+T++    +  R   A  +   M+  G
Sbjct: 559 MINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG 618

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +  D+ TYN ++ GL +    +    I   L          T+NI++ AL K G+  +A 
Sbjct: 619 IKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAK 678

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            L   +         PN+VTY +++K   ++G LE+ + L   L + G   N      + 
Sbjct: 679 DLFASLLA---RGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735

Query: 515 EEMMEKG 521
            ++++KG
Sbjct: 736 GKLLQKG 742



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 202/413 (48%), Gaps = 23/413 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNG-------------KFTSVSTIFHALSTCS---- 109
           G LLH         K+   L M V+NG              +T    +  A+   S    
Sbjct: 347 GTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRR 406

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
             L  +++   ++M A     K       F R    GL    +    L+  L    K++ 
Sbjct: 407 QGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDK 466

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
            E +  EM  R I  N   FN +LN LCK G + +A +I + M  + V   V+TYN LID
Sbjct: 467 AEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLID 526

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           GYC  G   K+ +A  + + MV +G+ PNEVT+NT+I+G+CK+  I  A  +F +M S G
Sbjct: 527 GYCLHG---KVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +  G+VTY++++ GL    +   A  L   M+ SG+K ++ T N ++ G C+    + A 
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL 643

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F ++          T+N +IDA  K GR ++A  +  S+L RG++P+V TY  ++  L
Sbjct: 644 RIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 703

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA---VSLLDE 459
             +G +E + ++   L  NG  A     N LVG L + G+ +KA   +S +DE
Sbjct: 704 IEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDE 756



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 192/402 (47%), Gaps = 15/402 (3%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSF 189
           H    AF         SS++  N+ L    +      +  +++ M    R ++  NL ++
Sbjct: 36  HHAHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAIS-LFRRMVMVARPKVPPNLITY 94

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + V++   + G L+ A   +  +   G + + +T++ L+   C K    +    D   + 
Sbjct: 95  SVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSE--AMDIALRR 152

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-----GSHGIAAGVVTYNSLINGL 304
           M   G  PN  ++  L+ G C +     A+ +   M        G    VV+YN++INGL
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 305 CVDGK-LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
             +G+ LD A  L D+M+  GL P+VVT N++I+   K + ++KA V+   + + G  P+
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            IT+N+L+  YC  G+  DA  +   M   GV PDV TYN L+  L + G     R I +
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +V  G +    TY  L+     +G   K   LLD M +   +   P+   +N+LI  + 
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ---PDHYIFNILIGTYT 389

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + GK++DA  L +++  +GL P+  TY IV + +   G + D
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDD 431



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 3/226 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K + ++ N ++    K G+ ED   ++++M  + +   + +++ +L GL +A +   A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M   G+   + TYNI++ G C+        +   +F+++          TFN +
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALR---IFQNLYLIDFHLENRTFNIM 664

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID   K      A  +F  + + G+   VVTY  ++  L   G L+E   L   +  +G 
Sbjct: 665 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 724

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
             N    NAL+    +K  V KA V    I E   S    T  +L+
Sbjct: 725 TANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 221/444 (49%), Gaps = 69/444 (15%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++ S N ++  L K GKF++   ++  MK+     +L +++ +++GLC +G L+ A+ + 
Sbjct: 229 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 288

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------------G 238
           ++M   GVSP VV YN +++GY + G I                                
Sbjct: 289 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENA 348

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ +A ++++ + E     + +T+  L+ G CK+  ++ A+ + EE  +         Y+
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           S+INGLC +G+LDE   + D+M   G KPN    NA+INGF +   +E A   F ++  +
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+V+TYNTLI+   K  R  +A+A+   ML +G  P++ TY+ L+ GL +   ++  
Sbjct: 469 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMA 528

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-------------ME- 464
            N+  + +  G +  +  +NI++  LC  GK + A+ L  EM +             ME 
Sbjct: 529 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEG 588

Query: 465 ---------KEKKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                      K W         P+I++YN+ +KG C   ++ DA G LN+ +++G++P 
Sbjct: 589 FYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 648

Query: 507 QTTYQIVRE------EMMEKGFIP 524
             T+ I+ +        ME  F+P
Sbjct: 649 AITWNILVQGYLALKGYMEPVFVP 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 226/497 (45%), Gaps = 91/497 (18%)

Query: 125 AYVKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           AY KN  P    + F+R  + +G +  + S N LL AL++  K+++ E  +   +   + 
Sbjct: 62  AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS 121

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            NL ++N ++   C+  + +KA +++  M   G SP V +Y  LI+   K G     Y +
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNG-----YMS 176

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSL 300
           DA+  F +M E G+ P+   +N LIDGF K  +I  A +++E +     +   + +YN +
Sbjct: 177 DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVM 236

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           INGLC  GK DE+  +   M  +    ++ T + LI+G C    ++ A  ++ +++E G+
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSM-------------LDRGV------------ 395
           SP V+ YNT+++ Y + GR+E+   +   M             L RG+            
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISI 356

Query: 396 ---LP------DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              LP      D  TY  L+ GL + G +    +I+ E  N         Y+ ++  LC+
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416

Query: 447 DGKSKKAVSLLDEMFK--------------------------------MEKEKKWPNIVT 474
           +G+  +   +LD+M K                                M  +  +P +VT
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMM 518
           YN LI G  +  +  +A  L+ E+L+KG  PN  TY ++                  + +
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536

Query: 519 EKGFIPDIEGHMYNISG 535
           EKGF PD++ H   I G
Sbjct: 537 EKGFKPDVKMHNIIIHG 553



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 210/407 (51%), Gaps = 10/407 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H    +G     + ++  ++   + +  + ++ + ++  Y++  +     E +K   
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMA--ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G ++ V+S N L+R L +  K ++   +++ +  +    +  ++  +++GLCK G LN
Sbjct: 328 KEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 386

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  I+E+ ++         Y+ +I+G C++G   ++ +   V   M ++G  PN    N
Sbjct: 387 KALSILEEAENGRGDLDTFAYSSMINGLCREG---RLDEVAGVLDQMTKHGCKPNPYVCN 443

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+GF +   +  A++ F  M S G    VVTYN+LINGL    +  EA AL  EM+  
Sbjct: 444 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KPN++T + L+NG C+ K ++ A  L+    E+G  P V  +N +I   C  G++EDA
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M  R  +P++ T+N L+ G  +  + E    I + ++  G++  +++YNI +  
Sbjct: 564 LQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKG 623

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ-KGKLE 489
           LC   +   AV  L++          P  +T+N+L++G+   KG +E
Sbjct: 624 LCSCHRISDAVGFLNDAV---DRGVLPTAITWNILVQGYLALKGYME 667



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 183/359 (50%), Gaps = 14/359 (3%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL-GVSPKVVTYN 225
           +    YV+  + +R  +  L     V +   K    ++A DI + M  + G  P + +YN
Sbjct: 39  YSHTPYVFHHILKRLFDPKL-----VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYN 93

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            L++   +     K  +A++ F      G+ PN  T+N LI   C+ +    A ++   M
Sbjct: 94  SLLNALIESN---KWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 150

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G +  V +Y +LIN L  +G + +A+ L DEM   G+ P+V   N LI+GF KK  +
Sbjct: 151 WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 210

Query: 346 EKARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
             A  +++ + +   + P++ +YN +I+  CK G+ +++F + + M       D+ TY+ 
Sbjct: 211 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 270

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL   GN++G   +  E+  NG+   +V YN ++    + G+ ++ +    E++K+ 
Sbjct: 271 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL----ELWKVM 326

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +++    +V+YN+LI+G  +  K+++A  +   L EK    +  TY ++   + + G++
Sbjct: 327 EKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 226/473 (47%), Gaps = 70/473 (14%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  +   L+  Y K  +  +  + FK     GL+ +    +  +  L + G+ E+ + ++
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M  R +  +  ++  +++G  KAGK + A +I ++M        VV YN+LI+G  K 
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G     Y++++    M + G+ P+  TFNT+I+ +CK+ N+  A+K+  EM S+G+    
Sbjct: 416 GK----YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKP--------------------------- 327
           +T N L+  LC  G++++ + L ++M+  G  P                           
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ 531

Query: 328 --------NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                   ++ T N LI+ FC+  ++ +A ++F D+  +G+   +ITYN LI  YC    
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ AFA+ + ML  GV P+V TYN L+ GLS    ++    ++N++   G+     TY+I
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV    K G  K+ V L  EM     +   P   TYNVLI  F +  K+  A  L+ E+ 
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMIT---KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708

Query: 500 EKGLIPNQTTYQI----------------------------VREEMMEKGFIP 524
            +G+ PN +TY I                            + EEM EKGFIP
Sbjct: 709 VRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 6/287 (2%)

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           +N+LIDGYC+ G I +   A  + + M   G  P+ VT+NTL++GFCK  ++  A K+  
Sbjct: 20  FNVLIDGYCRNGEISR---AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E+    +   V+TY +LI+  C    L++A+ + DEM    L P+VVT   ++NG CK  
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            VE+A+ +F ++ E G+ P+  +Y TLID+  KEG + +AF ++  M+ RG+  DV  Y 
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+ GL + G      ++   L+   +    VTY+ L+   CK G   K   LL E   M
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE---M 253

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E++  +PN++ Y+ ++ G+ +KG L +A  ++ +++++ ++PN   Y
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 213/427 (49%), Gaps = 18/427 (4%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           SL  + +    +M    K+ K       F+   + G+  +  S   L+ +L KEG   + 
Sbjct: 117 SLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +   M  R I  ++  +  +++GL KAG  N A D+ + +    + P  VTY+ LIDG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK   +G + K + + ++M E  I PN + +++++DG+ K   ++ AM V  +M    I
Sbjct: 237 HCK---LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              V  Y +LI+G     +   A+ L  EM + GL+ N    ++ +N   +   +E+A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF D+  +GL P  + Y +++D + K G+  DAF +   M ++    DV  YN LI GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 411 REGNVEGVRNIMNELVNNGMRA-GL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G  E      +E  + GMR  GL     T+N ++ A CK+G    A+ LL+E   M+ 
Sbjct: 414 KLGKYE------SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE---MKS 464

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
               PN +T N+L++  C  G++E    LLN++L  G  P  TT++ V +    K    D
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA-SSKSRRAD 523

Query: 526 IEGHMYN 532
           +  HM++
Sbjct: 524 VILHMHD 530



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 231/492 (46%), Gaps = 59/492 (11%)

Query: 78  KYPKIRSFLHMF-------VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           ++P+IR  +  F        +NG+ +    +   + T  +    + +  + LM  + K  
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT--EGPAPDIVTYNTLMNGFCK-- 64

Query: 131 KPHLG--FEAFKRAGDYGL---KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
              +G  F A K  G+  L   + +V++   L+ A  K    ED  Y+Y EM  + +  +
Sbjct: 65  ---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---- 241
           + ++  ++NGLCK+GK+ +A  +  +M+ +GV P   +Y  LID   K+G + + +    
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 242 ----------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                        A+ +F+ ++E  ++PN VT++ LIDG CK  
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +++    + +EM    I   V+ Y+S+++G    G L+EA+ +  +M+   + PNV    
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+G+ K      A  LF ++  +GL  +    ++ ++   + GRME+A  +   M+ R
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+LPD   Y  ++ G  + G      NI  E+        +V YN+L+  L K GK +  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-- 419

Query: 454 VSLLDEMFK--MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                E F   M +    P+  T+N +I  +C++G L +A  LLNE+   GL PN  T  
Sbjct: 420 ----SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 512 IVREEMMEKGFI 523
           I+ + +   G I
Sbjct: 476 ILVQRLCAAGEI 487



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 50/398 (12%)

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           Y + E++R     +++ FN +++G C+ G++++A +++E MK+ G +P +VTYN L++G+
Sbjct: 8   YQHPEIRR-----SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   IG ++ A  +  ++    + PN +T+ TLID +CK + +  A+ +++EM    + 
Sbjct: 63  CK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN----------------------- 328
             VVTY  ++NGLC  GK++EA ++  EM   G+ PN                       
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL 179

Query: 329 ------------VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
                       VV   AL++G  K  +   A  +F  + E+ L P+ +TY+ LID +CK
Sbjct: 180 QGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCK 239

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +     +   M ++ + P+V  Y+ ++ G +++G +    ++M ++V   +   +  
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+    K  +   A+ L  EM     E+   N    +  +    + G++E+A+ L  
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRGLEE---NNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           +++ +GL+P++  Y      MM+  F    E   +NI+
Sbjct: 357 DMMSRGLLPDRVNYT----SMMDGFFKAGKESDAFNIA 390



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           I SF++   ++G+      +F  +   S  L  + +    +M  + K  K     +AF  
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDM--MSRGLLPDRVNYTSMMDGFFKAGKES---DAFNI 389

Query: 142 AGDYGLKSS---VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           A +   KSS   V++ N L+  L K GK+E  E  +  M++  +  +  +FN ++N  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
            G L  A  ++ +MKS G+ P  +T NIL+   C  G I                     
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT 508

Query: 238 --------GKMYKADAVFK---DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                    K  +AD +      +V  G+  +  T+NTLI  FC+   I  A  VF++M 
Sbjct: 509 HKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMM 568

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             GI A ++TYN+LI+G C+   L +A A+  +M+  G+ PNV T N L+ G    +L++
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L + + E+GL P+  TY+ L+  + K G M++   +   M+ +G +P   TYN LI
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +  ++   +   + +M E+   G+     TY+IL+    K  K  +    L   ++ E +
Sbjct: 689 SCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748

Query: 467 KKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           + +         P   T   +     + GK  DA  +LN+L +K
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 24/282 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  + + N L+    + G       V+K+M  + I  ++ ++N +++G C +  L KA
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M + GVSP V TYNIL+ G      I +   A  +   M E G++PN  T++ L
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE---AAGLVNQMKERGLVPNATTYDIL 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K  N+   +K++ EM + G      TYN LI+      K+ +A  L  EM   G+
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 326 KPNVVTSNALINGF------------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            PN  T + LI G+             K+    +A+ LF++++E+G  P   T   +   
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFT 772

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL---SRE 412
             K G+  DA  + N +  +  + +      L+AG+   SRE
Sbjct: 773 LAKPGKKADAQRILNKLYKKKTVQE------LLAGVLWESRE 808



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +N   +  +R  +  +N+L+   C++G+  +AV LL+    M+ E   P+IVTYN L+ G
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLE---GMKTEGPAPDIVTYNTLMNG 61

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           FC+ G L  A  L+ E+    L PN  TY  +                 +EM  K  +PD
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 526 I 526
           +
Sbjct: 122 V 122


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 216/424 (50%), Gaps = 49/424 (11%)

Query: 128 KNMKPHLGFEAFKRAGD---YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           K M  H+  ++F+  G     G+ +++L+CN  +  L K+G++ + E +++ M  R ++ 
Sbjct: 26  KRMSGHI-HKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDP 84

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++  +++ LCK G +  A  + + M+  G+   V  YN LI+GYCK       ++A 
Sbjct: 85  NEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKH---NNFHQAR 141

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +  +MV  G+ P+  +++ LI G C+  ++++AM++  EM  + ++  V T+ +LI+G 
Sbjct: 142 GLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGF 201

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C DG +DEA  L  +MM S L PN VT N +I G+C+   + KA  L+D + ++GL+P  
Sbjct: 202 CKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDN 261

Query: 365 ITYNTLID-----------------------------------AYCKEGRMEDAFAMRNS 389
            TY +LI                                     +CKEG  E    +   
Sbjct: 262 YTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAE---ILCKE 318

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML    LP+  TYNC +  L+ EG +E  + +++  +  G  A  VT+N L+   C  G+
Sbjct: 319 MLAGHFLPNSYTYNCFLDYLANEGELEKAK-VLHAAMLEGCLANTVTFNTLIKGFCMAGQ 377

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            + A+ L+    K  +   +P+ ++Y+ +I   C+ G    A  L NE+L KGL P+   
Sbjct: 378 IQGAIDLMQ---KNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVA 434

Query: 510 YQIV 513
           Y I+
Sbjct: 435 YTIL 438



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 191/396 (48%), Gaps = 45/396 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   D GL  + ++   L+ +L K G  ED   ++  M+ + I + +  +N ++NG CK
Sbjct: 74  FRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCK 133

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
               ++A  ++ +M + G++P   +Y+ LI G C+KG +     A  + ++M  N +  N
Sbjct: 134 HNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLAS---AMELHREMTRNAVSGN 190

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             TF  LI GFCKD N+  A ++F +M    +    VT+N +I G C  G + +A  L D
Sbjct: 191 VYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYD 250

Query: 319 EMMASGLKP-----------------------------------NVVTSNALINGFCKKK 343
           +M+  GL P                                   N  +  AL++GFCK+ 
Sbjct: 251 QMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG 310

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
               A +L  ++      P+  TYN  +D    EG +E A  +  +ML+ G L +  T+N
Sbjct: 311 ---SAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFN 366

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G    G ++G  ++M +   +G     ++Y+ ++  LCK G + KA  L +EM  +
Sbjct: 367 TLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEM--L 424

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            K  K P+IV Y +LI+     G+ +   G+ ++++
Sbjct: 425 YKGLK-PDIVAYTILIRWCNIHGEFDKGLGIYSDMV 459



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 184/425 (43%), Gaps = 96/425 (22%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++ + L G   +G ++K+  +      LG+   ++  N  ID   + G  G+  +A+ +F
Sbjct: 18  NWAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWID---RLGKDGRYREAEKLF 74

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + M + G+ PNEVT+  LI   CK   +  A+ +F+ M   GI   V  YNSLING C  
Sbjct: 75  RGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKH 134

Query: 308 GKLDEAVALRDEMMASGLKP-----------------------------------NVVTS 332
               +A  L +EM+A GL P                                   NV T 
Sbjct: 135 NNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTF 194

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
            ALI+GFCK   +++A  LF  + E  L P+ +T+N +I+ YC+ G +  AF + + MLD
Sbjct: 195 TALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLD 254

Query: 393 RGVLPDVSTYNCLIA-----------------------------------GLSREGNVEG 417
           RG+ PD  TY  LI+                                   G  +EG+ E 
Sbjct: 255 RGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAE- 313

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E++         TYN  +  L  +G+ +KA  L   M     E    N VT+N 
Sbjct: 314 --ILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAML----EGCLANTVTFNT 367

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-IVRE---------------EMMEKG 521
           LIKGFC  G+++ A  L+ +  E G  P+  +Y  I+ E               EM+ KG
Sbjct: 368 LIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKG 427

Query: 522 FIPDI 526
             PDI
Sbjct: 428 LKPDI 432



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 168/335 (50%), Gaps = 11/335 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  S  S + L+  L ++G       +++EM R  +  N+ +F  +++G CK G +++A
Sbjct: 151 GLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEA 210

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + +   M    + P  VT+N++I+GYC+ G I K ++   ++  M++ G+ P+  T+ +L
Sbjct: 211 TRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQ---LYDQMLDRGLTPDNYTYRSL 267

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C       A +   ++ ++       +  +L++G C +G    A  L  EM+A   
Sbjct: 268 ISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGS---AEILCKEMLAGHF 324

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T N  ++    +  +EKA+VL   + E G   + +T+NTLI  +C  G+++ A  
Sbjct: 325 LPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKGFCMAGQIQGAID 383

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +     + G  PD  +Y+ +I  L + G+      + NE++  G++  +V Y IL+    
Sbjct: 384 LMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCN 443

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
             G+  K + +  +M  +  E  +P +  YN++ K
Sbjct: 444 IHGEFDKGLGIYSDMVTVLPE--YPEV--YNIVNK 474


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 219/435 (50%), Gaps = 63/435 (14%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++ S N ++  L K GKF++   ++  MK+     +L +++ +++GLC +G L+ A+ + 
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------------G 238
           ++M   GVSP VV YN +++GY + G I                                
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENA 373

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+ +A ++++ + E     + +T+  L+ G CK+  ++ A+ + EE  +         Y+
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 433

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           S+INGLC +G+LDE   + D+M   G KPN    NA+INGF +   +E A   F ++  +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+V+TYNTLI+   K  R  +A+A+   ML +G  P++ TY+ L+ GL +   ++  
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-------------ME- 464
            N+  + +  G +  +  +NI++  LC  GK + A+ L  EM +             ME 
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 465 ---------KEKKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                      K W         P+I++YN+ +KG C   ++ DA G LN+ +++G++P 
Sbjct: 614 FYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 673

Query: 507 QTTYQIVREEMMEKG 521
             T+ I+   +++ G
Sbjct: 674 AITWNILVRAVLDNG 688



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 259/600 (43%), Gaps = 110/600 (18%)

Query: 22  SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           S  K+  P  VI +L  S+ +P   L  F   T+    SH    T  + H ++     PK
Sbjct: 3   SAPKSLSPKRVI-KLLKSEKNPHSALSIFDSVTRFPGYSH----TPYVFHHILKRLFDPK 57

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           +               VS I   + T     C   + + ++  AY KN  P    + F+R
Sbjct: 58  L------------VAHVSRIVELIRT-QKCKCPEDVALTVIK-AYAKNSMPDQALDIFQR 103

Query: 142 AGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
             + +G +  + S N LL AL++  K+++ E  +   +   +  NL ++N ++   C+  
Sbjct: 104 MHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKK 163

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPN 258
           + +KA +++  M   G SP V +Y  LI+   K G     Y +DA+  F +M E G+ P+
Sbjct: 164 QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNG-----YMSDALKLFDEMPERGVTPD 218

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
              +N LIDGF K  +I  A +++E +     +   + +YN +INGLC  GK DE+  + 
Sbjct: 219 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 278

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             M  +    ++ T + LI+G C    ++ A  ++ +++E G+SP V+ YNT+++ Y + 
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 378 GRMEDAFAMRNSMLDRG----------------------------VLP------DVSTYN 403
           GR+E+   +   M   G                            +LP      D  TY 
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYG 398

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK- 462
            L+ GL + G +    +I+ E  N         Y+ ++  LC++G+  +   +LD+M K 
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 463 -------------------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                                          M  +  +P +VTYN LI G  +  +  +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 492 NGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
             L+ E+L KG  PN  TY ++                  + +EKGF PD++ H   I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 205/405 (50%), Gaps = 9/405 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H    +G     + ++  ++   + +  + ++ + ++  Y++  +     E +K   
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMA--ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G ++ V+S N L+R L +  K ++   +++ +  +    +  ++  +++GLCK G LN
Sbjct: 353 KEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  I+E+ ++         Y+ +I+G C++G   ++ +   V   M ++G  PN    N
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGLCREG---RLDEVAGVLDQMTKHGCKPNPHVCN 468

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+GF +   +  A++ F  M S G    VVTYN+LINGL    +  EA AL  EM+  
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KPN++T + L+NG C+ K ++ A  L+    E+G  P V  +N +I   C  G++EDA
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M  R  +P++ T+N L+ G  +  + E    I + ++  G +  +++YNI +  
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKG 648

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           LC   +   AV  L++          P  +T+N+L++     G L
Sbjct: 649 LCSCHRISDAVGFLNDAV---DRGVLPTAITWNILVRAVLDNGAL 690


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 192/358 (53%), Gaps = 7/358 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           +C  ++RA  ++G+F DV  ++  M       N+ ++   ++GLCK G + +A  ++E+M
Sbjct: 218 TCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEM 277

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL-PNEVTFNTLIDGFCK 271
              G+ P V T+  LIDG CK   IG   +A  +F  +V++    PN  T+  +I G+CK
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCK---IGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  ++ A  +   M   G+A    TY +LI+G C  G  D A  L ++M   G  PN+ T
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYT 394

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            NA+I GFCKK  +++A  +    + QGL P  +TY  LI  +CK+G +  A  + N M 
Sbjct: 395 YNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA 454

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +    PD+ TY  +IA   ++  +E  + + ++ ++ G+     TY  ++   C+ GKS 
Sbjct: 455 ENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKST 514

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            A+ + +   +M +    P+ +TY  LI G C++ +LE+A  L   +L+K ++P   T
Sbjct: 515 SALKVFE---RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVT 569



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 207/423 (48%), Gaps = 12/423 (2%)

Query: 80  PKIRSFLHMFV---KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P  RSF  + +   + G+F     +  A+     SL  +S    +++ A+ +  +     
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSL--DSATCTVVVRAFCRQGRFRDVP 236

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             F R  + G   +V++    +  L K G  +   +V +EM  + ++ N+ +   +++GL
Sbjct: 237 GLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 197 CKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           CK G   +A  + ++ +KS    P V TY ++I GYCK+G   K+ +A+ +   MVE G+
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG---KLARAEMLLGRMVEQGL 353

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN  T+ TLIDG C+  +   A ++  +M   G    + TYN++I G C  GK+ +A  
Sbjct: 354 APNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYK 413

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +     + GL P+ VT   LI   CK+  +  A  LF+ ++E    P + TY T+I  YC
Sbjct: 414 VLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYC 473

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           ++ +ME +  + +  L  G++P   TY  +IAG  R G       +   +V +G     +
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPI 533

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY  L+  LCK+ + ++A +L + M     +   P  VT   L   +C++ K   A   L
Sbjct: 534 TYGALISGLCKESRLEEARALFETML---DKHMVPCDVTCVTLAYEYCRRDKTTIAVSFL 590

Query: 496 NEL 498
           + L
Sbjct: 591 DGL 593



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 198/435 (45%), Gaps = 36/435 (8%)

Query: 89  FVKNGKFTSVSTIFHAL------------STCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           F + G+F  V  +F  +            +   D LC+           YVK       F
Sbjct: 226 FCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKR---------GYVKQ-----AF 271

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY-KEMKRRRIELNLDSFNFVLNG 195
              +     GLK +V +   L+  L K G  E    ++ K +K    + N+ ++  ++ G
Sbjct: 272 HVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGG 331

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            CK GKL +A  ++  M   G++P   TY  LIDG+C+ G   + ++   +   M   G 
Sbjct: 332 YCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE---LMNKMKLEGF 388

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           LPN  T+N +I GFCK   I  A KV     S G+    VTY  LI   C  G +  A+ 
Sbjct: 389 LPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALD 448

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L ++M  +   P++ T   +I  +C+++ +E+++ LFD     GL P+  TY ++I  YC
Sbjct: 449 LFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYC 508

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G+   A  +   M+  G LPD  TY  LI+GL +E  +E  R +   +++  M    V
Sbjct: 509 RVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDV 568

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T   L    C+  K+  AVS LD + K ++          + L++       L+ A+  L
Sbjct: 569 TCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAH------AADALVRKLSAVDNLDAASLFL 622

Query: 496 NELLEKGLIPNQTTY 510
             +L+K    +  TY
Sbjct: 623 KNVLDKHYAVDHATY 637



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 170/341 (49%), Gaps = 13/341 (3%)

Query: 176 EMKRRRIELNLDSFNFVLN-GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           E++   + L +++ N+VL  GL +      A    + M   GV P   ++  L+ G C++
Sbjct: 138 ELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQE 194

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +  +ADA+   M   G   +  T   ++  FC+         +F  M   G    V
Sbjct: 195 G---RFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNV 251

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFD 353
           V Y + ++GLC  G + +A  + +EM+  GLKPNV T  +LI+G CK    E+A R+   
Sbjct: 252 VNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLK 311

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +      P+V TY  +I  YCKEG++  A  +   M+++G+ P+ +TY  LI G  R G
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGG 371

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNI 472
           + +    +MN++   G    + TYN ++G  CK GK ++A  +L    +M   +   P+ 
Sbjct: 372 SFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL----RMATSQGLCPDK 427

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           VTY +LI   C++G +  A  L N++ E    P+  TY  +
Sbjct: 428 VTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTI 468



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 164/327 (50%), Gaps = 15/327 (4%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---ADAVFKDMVENGILP 257
           +L +A+D++ +++S G+   V T N ++     + G+ + +    A   F  M   G+ P
Sbjct: 128 RLREATDMLLELRSHGLPLVVETANWVL-----RVGLRQRHHFAHARQAFDGM---GVRP 179

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  +F  L+ G C++     A  +   M   G +    T   ++   C  G+  +   L 
Sbjct: 180 DARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLF 239

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             M+  G  PNVV   A ++G CK+  V++A  + +++  +GL P+V T+ +LID  CK 
Sbjct: 240 GRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 378 GRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           G  E AF +   ++      P+V TY  +I G  +EG +     ++  +V  G+     T
Sbjct: 300 GWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+   C+ G   +A  L++   KM+ E   PNI TYN +I GFC+KGK++ A  +L 
Sbjct: 360 YTTLIDGHCRGGSFDRAFELMN---KMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFI 523
               +GL P++ TY ++  E  ++G I
Sbjct: 417 MATSQGLCPDKVTYTMLITEHCKQGHI 443



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 24/272 (8%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLIN-GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           A  +  E+ SHG+   V T N ++  GL        A    D M   G++P+  +  AL+
Sbjct: 132 ATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALV 188

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G C++   E+A  L   +  +G S    T   ++ A+C++GR  D   +   M++ G  
Sbjct: 189 LGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNP 248

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P+V  Y   + GL + G V+   +++ E+V  G++  + T+  L+  LCK G +++A  L
Sbjct: 249 PNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRL 308

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE- 515
             ++ K    K  PN+ TY V+I G+C++GKL  A  LL  ++E+GL PN  TY  + + 
Sbjct: 309 FLKLVKSSSYK--PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 516 -----------EMMEK----GFIPDIEGHMYN 532
                      E+M K    GF+P+I  + YN
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNI--YTYN 396



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 23/158 (14%)

Query: 379 RMEDAFAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           R    FA      D  GV PD  ++  L+ G  +EG  E    ++  +   G      T 
Sbjct: 160 RQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATC 219

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
            ++V A C+ G+ +    L   M +M      PN+V Y   + G C++G ++ A  +L  
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNP---PNVVNYTAWVDGLCKRGYVKQAFHVL-- 274

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
                            EEM+ KG  P++  H   I G
Sbjct: 275 -----------------EEMVGKGLKPNVYTHTSLIDG 295


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 226/473 (47%), Gaps = 70/473 (14%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  +   L+  Y K  +  +  + FK     GL+ +    +  +  L + G+ E+ + ++
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M  R +  +  ++  +++G  KAGK + A +I ++M        VV YN+LI+G  K 
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G     Y++++    M + G+ P+  TFNT+I+ +CK+ N+  A+K+  EM S+G+    
Sbjct: 416 GK----YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKP--------------------------- 327
           +T N L+  LC  G++++ + L ++M+  G  P                           
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQ 531

Query: 328 --------NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                   ++ T N LI+ FC+  ++ +A ++F D+  +G+   +ITYN LI  YC    
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ AFA+ + ML  GV P+V TYN L+ GLS    ++    ++N++   G+     TY+I
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV    K G  K+ V L  EM     +   P   TYNVLI  F +  K+  A  L+ E+ 
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMIT---KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708

Query: 500 EKGLIPNQTTYQI----------------------------VREEMMEKGFIP 524
            +G+ PN +TY I                            + EEM EKGFIP
Sbjct: 709 VRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 6/287 (2%)

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           +N+LIDGYC+ G I +   A  + + M   G  P+ VT+NTL++GFCK  ++  A K+  
Sbjct: 20  FNVLIDGYCRNGEISR---AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E+    +   V+TY +LI+  C    L++A+ + DEM    L P+VVT   ++NG CK  
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            VE+A+ +F ++ E G+ P+  +Y TLID+  KEG + +AF ++  M+ RG+  DV  Y 
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+ GL + G      ++   L+   +    VTY+ L+   CK G   K   LL E   M
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE---M 253

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E++  +PN++ Y+ ++ G+ +KG L +A  ++ +++++ ++PN   Y
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 205/408 (50%), Gaps = 17/408 (4%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           SL  + +    +M    K+ K       F+   + G+  +  S   L+ +L KEG   + 
Sbjct: 117 SLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +   M  R I  ++  +  +++GL KAG  N A D+ + +    + P  VTY+ LIDG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK   +G + K + + ++M E  I PN + +++++DG+ K   ++ AM V  +M    I
Sbjct: 237 HCK---LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              V  Y +LI+G     +   A+ L  EM + GL+ N    ++ +N   +   +E+A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF D+  +GL P  + Y +++D + K G+  DAF +   M ++    DV  YN LI GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 411 REGNVEGVRNIMNELVNNGMRA-GL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G  E      +E  + GMR  GL     T+N ++ A CK+G    A+ LL+E   M+ 
Sbjct: 414 KLGKYE------SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE---MKS 464

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
               PN +T N+L++  C  G++E    LLN++L  G  P  TT++ V
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAV 512



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 231/492 (46%), Gaps = 59/492 (11%)

Query: 78  KYPKIRSFLHMF-------VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           ++P+IR  +  F        +NG+ +    +   + T  +    + +  + LM  + K  
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT--EGPAPDIVTYNTLMNGFCK-- 64

Query: 131 KPHLG--FEAFKRAGDYGL---KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
              +G  F A K  G+  L   + +V++   L+ A  K    ED  Y+Y EM  + +  +
Sbjct: 65  ---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---- 241
           + ++  ++NGLCK+GK+ +A  +  +M+ +GV P   +Y  LID   K+G + + +    
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 242 ----------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                        A+ +F+ ++E  ++PN VT++ LIDG CK  
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +++    + +EM    I   V+ Y+S+++G    G L+EA+ +  +M+   + PNV    
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+G+ K      A  LF ++  +GL  +    ++ ++   + GRME+A  +   M+ R
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+LPD   Y  ++ G  + G      NI  E+        +V YN+L+  L K GK +  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-- 419

Query: 454 VSLLDEMFK--MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                E F   M +    P+  T+N +I  +C++G L +A  LLNE+   GL PN  T  
Sbjct: 420 ----SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 512 IVREEMMEKGFI 523
           I+ + +   G I
Sbjct: 476 ILVQRLCAAGEI 487



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 50/398 (12%)

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           Y + E++R     +++ FN +++G C+ G++++A +++E MK+ G +P +VTYN L++G+
Sbjct: 8   YQHPEIRR-----SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   IG ++ A  +  ++    + PN +T+ TLID +CK + +  A+ +++EM    + 
Sbjct: 63  CK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN----------------------- 328
             VVTY  ++NGLC  GK++EA ++  EM   G+ PN                       
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL 179

Query: 329 ------------VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
                       VV   AL++G  K  +   A  +F  + E+ L P+ +TY+ LID +CK
Sbjct: 180 QGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCK 239

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +     +   M ++ + P+V  Y+ ++ G +++G +    ++M ++V   +   +  
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+    K  +   A+ L  EM     E+   N    +  +    + G++E+A+ L  
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRGLEE---NNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           +++ +GL+P++  Y      MM+  F    E   +NI+
Sbjct: 357 DMMSRGLLPDRVNYT----SMMDGFFKAGKESDAFNIA 390



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           I SF++   ++G+      +F  +   S  L  + +    +M  + K  K     +AF  
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDM--MSRGLLPDRVNYTSMMDGFFKAGKES---DAFNI 389

Query: 142 AGDYGLKSS---VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           A +   KSS   V++ N L+  L K GK+E  E  +  M++  +  +  +FN ++N  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
            G L  A  ++ +MKS G+ P  +T NIL+   C  G I                     
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT 508

Query: 238 --------GKMYKADAVFK---DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                    K  +AD +      +V  G+  +  T+NTLI  FC+   I  A  VF++M 
Sbjct: 509 HKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMM 568

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             GI A ++TYN+LI+G C+   L +A A+  +M+  G+ PNV T N L+ G    +L++
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L + + E+GL P+  TY+ L+  + K G M++   +   M+ +G +P   TYN LI
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +  ++   +   + +M E+   G+     TY+IL+    K  K  +    L   ++ E +
Sbjct: 689 SCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748

Query: 467 KKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           + +         P   T   +     + GK  DA  +LN+L +K
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 24/282 (8%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  + + N L+    + G       V+K+M  + I  ++ ++N +++G C +  L KA
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M + GVSP V TYNIL+ G      I +   A  +   M E G++PN  T++ L
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE---AAGLVNQMKERGLVPNATTYDIL 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K  N+   +K++ EM + G      TYN LI+      K+ +A  L  EM   G+
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 326 KPNVVTSNALINGF------------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            PN  T + LI G+             K+    +A+ LF++++E+G  P   T   +   
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFT 772

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL---SRE 412
             K G+  DA  + N +  +  + +      L+AG+   SRE
Sbjct: 773 LAKPGKKADAQRILNKLYKKKTVQE------LLAGVLWESRE 808



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +N   +  +R  +  +N+L+   C++G+  +AV LL+    M+ E   P+IVTYN L+ G
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLE---GMKTEGPAPDIVTYNTLMNG 61

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           FC+ G L  A  L+ E+    L PN  TY  +                 +EM  K  +PD
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 526 I 526
           +
Sbjct: 122 V 122


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 204/410 (49%), Gaps = 41/410 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V + N L+    K  + +D   V   M+ +    +  ++N ++  LC  GKL+ A  
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ + S    P V+TY ILI+    +GG+ +  K   +  +M+  G+ P+  T+NT+I 
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALK---LLDEMLSRGLKPDMFTYNTIIR 267

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A ++   +   G    V++YN L+  L   GK +E   L  +M +    P
Sbjct: 268 GMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 327

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT + LI   C+   +E+A  L   + E+GL+P   +Y+ LI A+C+EGR++ A    
Sbjct: 328 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN------------------------ 423
            +M+  G LPD+  YN ++A L + G  +    I                          
Sbjct: 388 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 447

Query: 424 -----------ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                      E+V+NG+    +TYN ++  LC++G   KA  LL +M   E     P++
Sbjct: 448 GDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFH---PSV 504

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           VTYN+++ GFC+  ++EDA  +L+ ++  G  PN+TTY ++ E +   G+
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 175/326 (53%), Gaps = 9/326 (2%)

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C++G   ++  ++E M   G +P V+    LI G+     + K  +   + +   +    
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ---- 151

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+   +N LI+GFCK   I  A +V + M S   +   VTYN +I  LC  GKLD A+ +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D++++   +P V+T   LI     +  V++A  L D++  +GL P + TYNT+I   CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG ++ AF M  ++  +G  PDV +YN L+  L  +G  E    +M ++ +      +VT
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y+IL+  LC+DGK ++A++LL    K+ KEK   P+  +Y+ LI  FC++G+L+ A   L
Sbjct: 332 YSILITTLCRDGKIEEAMNLL----KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKG 521
             ++  G +P+   Y  V   + + G
Sbjct: 388 ETMISDGCLPDIVNYNTVLATLCKNG 413



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 182/352 (51%), Gaps = 6/352 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++   L+ A + EG  ++   +  EM  R ++ ++ ++N ++ G+CK G +++A +
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 280

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +++  G  P V++YNIL+     +G   K  + + +   M      PN VT++ LI 
Sbjct: 281 MIRNLELKGCEPDVISYNILLRALLNQG---KWEEGEKLMTKMFSEKCDPNVVTYSILIT 337

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C+D  I  AM + + M   G+     +Y+ LI   C +G+LD A+   + M++ G  P
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++V  N ++   CK    ++A  +F  + E G SP+  +YNT+  A    G    A  M 
Sbjct: 398 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 457

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G+ PD  TYN +I+ L REG V+    ++ ++ +      +VTYNI++   CK 
Sbjct: 458 LEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 517

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            + + A+ +LD M         PN  TY VLI+G    G   +A  L N+L+
Sbjct: 518 HRIEDAIDVLDSMV---GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  ++   +I+I+  ML    +    L  E   R    GLK  + + N ++R + KEG  
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSR----GLKPDMFTYNTIIRGMCKEGMV 275

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    + + ++ +  E ++ S+N +L  L   GK  +   +M  M S    P VVTY+IL
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I   C+ G   K+ +A  + K M E G+ P+  +++ LI  FC++  +  A++  E M S
Sbjct: 336 ITTLCRDG---KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    +V YN+++  LC +GK D+A+ +  ++   G  PN  + N + +         +
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +  ++   G+ P  ITYN++I   C+EG ++ AF +   M      P V TYN ++ 
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           G  +   +E   ++++ +V NG R    TY +L+  +   G   +A+ L +++ ++
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 568



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 20/272 (7%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  N   ++ + E M   G    V+    LI G      + +AV + + +   G +P+V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              NALINGFCK   ++ A  + D +  +  SP  +TYN +I + C  G+++ A  + + 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +L     P V TY  LI     EG V+    +++E+++ G++  + TYN ++  +CK+G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  ++     +E +   P++++YN+L++    +GK E+   L+ ++  +   PN  T
Sbjct: 275 VDRAFEMIR---NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 510 YQIV---------REEMM-------EKGFIPD 525
           Y I+          EE M       EKG  PD
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 198/350 (56%), Gaps = 7/350 (2%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G  +  E VYKEM   ++  +   +N +LNG  +AG++    ++ E M     S  VV
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGR-EXSQNVV 60

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           ++NI++ G     G G + KA ++++ M ++G + +  T+  L+DGFCK+  I+ +++V 
Sbjct: 61  SFNIMMRGLF---GNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL 117

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E     G       Y+++INGLC + KLDEAV++ + M+ +G  PN    N LINGF   
Sbjct: 118 EIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGV 177

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              + A  +F ++     SP+V+TYNTLI+  CK  R  +A+ +   ML++G  P V TY
Sbjct: 178 SKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL +   VE    + N++++NG++  +   NIL+  LC  GK++ A+ L    F 
Sbjct: 238 SLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLY---FD 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           M +    PN+VT+N L++GF + G + +A G+   +L  GL P+  +Y I
Sbjct: 295 MNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNI 344



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 5/310 (1%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           NG      +I+  ++        +S    +L+  + KN   +      + A + G     
Sbjct: 72  NGDVDKAISIWELMT--QSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDA 129

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            + + ++  L KE K ++   V   M +     N   +N ++NG     K + A  +  +
Sbjct: 130 FAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFRE 189

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S   SP VVTYN LI+G CK     + Y    + K+M+E G  P  +T++ L+ G C+
Sbjct: 190 MGSTNCSPTVVTYNTLINGLCKGERFAEAYD---LVKEMLEKGWKPCVITYSLLMKGLCQ 246

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A++++ ++ S+G+   V   N LI+GLC  GK   A+ L  +M      PN+VT
Sbjct: 247 GHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVT 306

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L+ GF K   +  A  ++  I   GL P +++YN  +   C   R+  A       L
Sbjct: 307 HNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDAL 366

Query: 392 DRGVLPDVST 401
            + + P + T
Sbjct: 367 AKKIAPSIIT 376



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 4/244 (1%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  +I  A +V++EM    ++   V YN+++NG    G++ + + L  E+M      NV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ N ++ G      V+KA  +++ +++ G      TY  L+D +CK G +  +  +   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             ++G + D   Y+ +I GL +E  ++   +++N ++ NG       YN L+       K
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A+ +  EM         P +VTYN LI G C+  +  +A  L+ E+LEKG  P   T
Sbjct: 180 FDDAIRVFREMGSTNCS---PTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236

Query: 510 YQIV 513
           Y ++
Sbjct: 237 YSLL 240



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/111 (20%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G+++G   +  E+  + +    V YN ++    + G+ K  + L + M +   +    N+
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQ----NV 59

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           V++N++++G    G ++ A  +   + + G + + TTY I+ +   + G+I
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYI 110


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 226/473 (47%), Gaps = 70/473 (14%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  +   L+  Y K  +  +  + FK     GL+ +    +  +  L + G+ E+ + ++
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M  R +  +  ++  +++G  KAGK + A +I ++M        VV YN+LI+G  K 
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G     Y++++    M + G+ P+  TFNT+I+ +CK+ N+  A+K+  EM S+G+    
Sbjct: 416 GK----YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKP--------------------------- 327
           +T N L+  LC  G++++ + L ++M+  G  P                           
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ 531

Query: 328 --------NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                   ++ T N LI+ FC+  ++ +A ++F D+  +G+   +ITYN LI  YC    
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ AFA+ + ML  GV P+V TYN L+ GLS    ++    ++N++   G+     TY+I
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV    K G  K+ V L  EM     +   P   TYNVLI  F +  K+  A  L+ E+ 
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMIT---KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708

Query: 500 EKGLIPNQTTYQI----------------------------VREEMMEKGFIP 524
            +G+ PN +TY I                            + EEM EKGFIP
Sbjct: 709 VRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 6/287 (2%)

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           +N+LIDGYC+ G I +   A  + + M   G  P+ VT+NTL++GFCK  ++  A K+  
Sbjct: 20  FNVLIDGYCRNGEISR---AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           E+    +   V+TY +LI+  C    L++A+ + DEM    L P+VVT   ++NG CK  
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            VE+A+ +F ++ E G+ P+  +Y TLID+  KEG + +AF ++  M+ RG+  DV  Y 
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+ GL + G      ++   L+   +    VTY+ L+   CK G   K   LL E   M
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE---M 253

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           E++  +PN++ Y+ ++ G+ +KG L +A  ++ +++++ ++PN   Y
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 213/427 (49%), Gaps = 18/427 (4%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           SL  + +    +M    K+ K       F+   + G+  +  S   L+ +L KEG   + 
Sbjct: 117 SLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +   M  R I  ++  +  +++GL KAG  N A D+ + +    + P  VTY+ LIDG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           +CK   +G + K + + ++M E  I PN + +++++DG+ K   ++ AM V  +M    I
Sbjct: 237 HCK---LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              V  Y +LI+G     +   A+ L  EM + GL+ N    ++ +N   +   +E+A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF D+  +GL P  + Y +++D + K G+  DAF +   M ++    DV  YN LI GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 411 REGNVEGVRNIMNELVNNGMRA-GL----VTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           + G  E      +E  + GMR  GL     T+N ++ A CK+G    A+ LL+E   M+ 
Sbjct: 414 KLGKYE------SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE---MKS 464

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
               PN +T N+L++  C  G++E    LLN++L  G  P  TT++ V +    K    D
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA-SSKSRRAD 523

Query: 526 IEGHMYN 532
           +  HM++
Sbjct: 524 VILHMHD 530



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 231/492 (46%), Gaps = 59/492 (11%)

Query: 78  KYPKIRSFLHMF-------VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNM 130
           ++P+IR  +  F        +NG+ +    +   + T  +    + +  + LM  + K  
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT--EGPAPDIVTYNTLMNGFCK-- 64

Query: 131 KPHLG--FEAFKRAGDYGL---KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
              +G  F A K  G+  L   + +V++   L+ A  K    ED  Y+Y EM  + +  +
Sbjct: 65  ---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---- 241
           + ++  ++NGLCK+GK+ +A  +  +M+ +GV P   +Y  LID   K+G + + +    
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 242 ----------------------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
                                        A+ +F+ ++E  ++PN VT++ LIDG CK  
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           +++    + +EM    I   V+ Y+S+++G    G L+EA+ +  +M+   + PNV    
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+G+ K      A  LF ++  +GL  +    ++ ++   + GRME+A  +   M+ R
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+LPD   Y  ++ G  + G      NI  E+        +V YN+L+  L K GK +  
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-- 419

Query: 454 VSLLDEMFK--MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                E F   M +    P+  T+N +I  +C++G L +A  LLNE+   GL PN  T  
Sbjct: 420 ----SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 512 IVREEMMEKGFI 523
           I+ + +   G I
Sbjct: 476 ILVQRLCAAGEI 487



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 50/398 (12%)

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
           Y + E++R     +++ FN +++G C+ G++++A +++E MK+ G +P +VTYN L++G+
Sbjct: 8   YQHPEIRR-----SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   IG ++ A  +  ++    + PN +T+ TLID +CK + +  A+ +++EM    + 
Sbjct: 63  CK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN----------------------- 328
             VVTY  ++NGLC  GK++EA ++  EM   G+ PN                       
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL 179

Query: 329 ------------VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
                       VV   AL++G  K  +   A  +F  + E+ L P+ +TY+ LID +CK
Sbjct: 180 QGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCK 239

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G +     +   M ++ + P+V  Y+ ++ G +++G +    ++M ++V   +   +  
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+    K  +   A+ L  EM     E+   N    +  +    + G++E+A+ L  
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRGLEE---NNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           +++ +GL+P++  Y      MM+  F    E   +NI+
Sbjct: 357 DMMSRGLLPDRVNYT----SMMDGFFKAGKESDAFNIA 390



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           I SF++   ++G+      +F  +   S  L  + +    +M  + K  K     +AF  
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDM--MSRGLLPDRVNYTSMMDGFFKAGKES---DAFNI 389

Query: 142 AGDYGLKSS---VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           A +   KSS   V++ N L+  L K GK+E  E  +  M++  +  +  +FN ++N  CK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------- 237
            G L  A  ++ +MKS G+ P  +T NIL+   C  G I                     
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT 508

Query: 238 --------GKMYKADAVFK---DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                    K  +AD +      +V  G+  +  T+NTLI  FC+   I  A  VF++M 
Sbjct: 509 HKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMM 568

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             GI A ++TYN+LI+G C+   L +A A+  +M+  G+ PNV T N L+ G    +L++
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A  L + + E+GL P+  TY+ L+  + K G M++   +   M+ +G +P   TYN LI
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +  ++   +   + +M E+   G+     TY+IL+    K  K  +    L   ++ E +
Sbjct: 689 SCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748

Query: 467 KKW---------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           + +         P   T   +     + GK  DA  +LN+L +K
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 15/262 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K  + + N L+    + G       V+K+M  + I  ++ ++N +++G C +  L KA
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M + GVSP V TYNIL+ G      I +   A  +   M E G++PN  T++ L
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE---AAGLVNQMKERGLVPNATTYDIL 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K  N+   +K++ EM + G      TYN LI+      K+ +A  L  EM   G+
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 326 KPNVVTSNALINGF------------CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            PN  T + LI G+             K+    +A+ LF++++E+G  P   T   +   
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFT 772

Query: 374 YCKEGRMEDAFAMRNSMLDRGV 395
             K G+  DA  + N +  + V
Sbjct: 773 LAKPGKKADAQRILNKLYKKKV 794



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +N   +  +R  +  +N+L+   C++G+  +AV LL+    M+ E   P+IVTYN L+ G
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLE---GMKTEGPAPDIVTYNTLMNG 61

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPD 525
           FC+ G L  A  L+ E+    L PN  TY  +                 +EM  K  +PD
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 526 I 526
           +
Sbjct: 122 V 122


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 213/397 (53%), Gaps = 9/397 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M +     N+ S+N +
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 193 LNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           L GLC   +  +A ++++ M   G    P VV+Y  +I+G+ K+G + K Y     + +M
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY---GTYHEM 225

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           ++ GILPN VT+N++I   CK + +  AM+V   M  +G+     TYNS+++G C  G+ 
Sbjct: 226 LDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M + G++P+VVT N+L++  CK     +AR +FD ++++GL P + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  Y  +G + +   + + M+  G+ P+   ++ LI   +++G V+    + +++   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VTY  ++G LCK G+ + A+   ++M     E+  P  + YN LI   C   K + 
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L+ E+L++G+  +   +  + +   ++G + + E
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 231/512 (45%), Gaps = 75/512 (14%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G        +H +      +  N +  + ++ A  K        
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYNSIIAALCKAQAMDKAM 254

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+  +  + N ++      G+ ++     K+M    +E ++ ++N +++ L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           CK G+  +A  + + M   G+ P++ TY  L+ GY  KG +                   
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        GK+ +A  VF  M + G+ P+ VT+ T+I   CK   +  AM+ FE+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 285 MGSHGIAAGVVTYNSLINGLCV-----------------------------------DGK 309
           M    ++ G + YNSLI+ LC+                                   +G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + E+  L D M+  G+KPN++T + LI+G+C    +++A  L   +   G+ P  +TYNT
Sbjct: 495 VIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI+ YCK  RMEDA  +   M   GV PD+ TYN ++ GL +       + +   +  +G
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  L TYNI++  LCK+  + +A+ +   +   + + +     T+N++I    + G+ +
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR---TFNIMIGALLKVGRND 671

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +A  L   L   GL+P+  TY ++ E ++E+G
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  K+GK +    V+ +M+++ +  +  ++  V+  LCK+G++  A    E M    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  + YN LI   C      K  KA  +  +M++ GI  + + FN++ID  CK+  + 
Sbjct: 440 LSPGNIVYNSLIHSLCI---FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + K+F+ M   G+   ++TY++LI+G C+ GK+DEA  L   M++ G+KP+ VT N LI
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+CK   +E A VLF ++   G+SP +ITYN ++    +  R   A  +   + + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++STYN ++ GL +    +    +   L    ++    T+NI++GAL K G++ +A  L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                 +      P++ TY+++ +   ++G LE+ + L   + E G   N      +  +
Sbjct: 677 FA---ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 517 MMEKGFIPDIEGHMYNI 533
           ++++G I     +++ I
Sbjct: 734 LLQRGDITRAGTYLFMI 750



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 179/351 (50%), Gaps = 11/351 (3%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           ILI   C  G +   +   A   ++++ G   + + F  L+ G C D+  S AM  V   
Sbjct: 96  ILIGSCCCAGRLDLGF---AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKK 342
           M   G    V +YN L+ GLC + +  EA+ L   M   G    P+VV+   +INGF K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++KA   + ++ ++G+ P+V+TYN++I A CK   M+ A  +  SM+  GV+P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  + D    
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD---S 329

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M K    P I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 148/306 (48%), Gaps = 13/306 (4%)

Query: 232 CKKGGIGKMYKADAV--FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           C    + +   A AV  +  M   G   + PN  T+  LI   C    +         + 
Sbjct: 59  CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVI 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKL 344
             G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177

Query: 345 VEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++A  L   + + G    P V++Y T+I+ + KEG ++ A+   + MLDRG+LP+V TY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +IA L +   ++    ++  +V NG+     TYN +V   C  G+ K+A+  L    K
Sbjct: 238 NSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK---K 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTYN L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 355 LVEMHG 360



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 29/347 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +RYF     E R S   ++   L+HSL +  K+ K +  +   +  G    + TIF   +
Sbjct: 429 MRYFEQMIDE-RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIF--FN 483

Query: 107 TCSDSLCRNSIIID---MLMLAYVKNMKPHL--------GF-------EAFKRAGDY--- 145
           +  DS C+   +I+   +  L     +KP++        G+       EA K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++ N L+    K  + ED   +++EM+   +  ++ ++N +L GL +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G   ++ TYNI++ G CK     +  +   +F+++    +     TFN +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR---MFQNLCLTDLQLETRTFNIM 660

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K      A  +F  + ++G+   V TY+ +   L   G L+E   L   M  +G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             N    N+++    ++  + +A      I E+  S    T +  +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 197/387 (50%), Gaps = 11/387 (2%)

Query: 132 PHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
           PH         +F R        S +   +LL ++ K   +  V  +  +M    I  ++
Sbjct: 88  PHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 147

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            + N ++N  C   +L  A  ++  +  LG  P   T+N LI G C +G IG   +A  +
Sbjct: 148 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG---EALHL 204

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F   +  G  P+ VT+ TL++G CK  N SAA+++   M        V+ YN++I+ LC 
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
           D ++ EA  L  EM+  G+ P++ T N+LI+  C     +    L +++    + P+V+ 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           ++T++DA CKEG +  A  + + M+ RGV PDV TY  L+ G      ++    + + +V
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G    + +YNIL+   C+  +  KA+ LL++   M  +    + VTYN LI G C  G
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ---MSLQGLIADTVTYNTLIHGLCHVG 441

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
           +L+ A  L +E++  G IP+  TY+I+
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRIL 468



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 196/377 (51%), Gaps = 6/377 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+   V + N L+ +     +      V  ++ +   + +  +FN ++ GLC  GK+ +
Sbjct: 141 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 200

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  + +     G  P VVTY  L++G CK   +G    A  + + MV+    PN + +NT
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCK---VGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +ID  CKD  ++ A  +F EM + GI+  + TYNSLI+ LC   +      L +EM+ S 
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PNVV  + +++  CK+ ++  A  + D + ++G+ P V+TY  L+D +C    M++A 
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + ++M+ +G +P+V +YN LI G  +   ++    ++ ++   G+ A  VTYN L+  L
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C  G+ + A++L  EM       + P++VTY +L+   C+   L +A  LL  +    L 
Sbjct: 438 CHVGRLQHAIALFHEMV---ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 494

Query: 505 PNQTTYQIVREEMMEKG 521
            +   Y I  + M   G
Sbjct: 495 ADILVYNIAIDGMCRAG 511



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 216/441 (48%), Gaps = 19/441 (4%)

Query: 68  RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           R+LH        P    F  +     K    ST+  +LST  DS     I  D+  L  +
Sbjct: 102 RMLH----MHPPPSTVDFTKLLTSIAKMKHYSTVL-SLSTQMDSF---GIPPDVYTLNIL 153

Query: 128 KNMKPHL-----GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
            N   HL      F    +    G +    + N L+R L  EGK  +  +++ +      
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           + ++ ++  ++NGLCK G  + A  ++  M      P V+ YN +ID  CK   + + + 
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +F +M+  GI P+  T+N+LI   C          +  EM +  I   VV ++++++
Sbjct: 274 ---LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +G +  A  + D M+  G++P+VVT  AL++G C +  +++A  +FD +  +G  P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +V +YN LI+ YC+  RM+ A  +   M  +G++ D  TYN LI GL   G ++    + 
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+V +G    LVTY IL+  LCK+    +A+ LL     +E      +I+ YN+ I G 
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK---AIEGSNLDADILVYNIAIDGM 507

Query: 483 CQKGKLEDANGLLNELLEKGL 503
           C+ G+LE A  L + L  +G 
Sbjct: 508 CRAGELEAARDLFSNLSCQGF 528



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 3/285 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++ N ++ +L K+ +  +   ++ EM  + I  ++ ++N +++ LC   +    + 
Sbjct: 249 RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTT 308

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +M +  + P VV ++ ++D  CK+G I     A  V   M++ G+ P+ VT+  L+D
Sbjct: 309 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI---AHDVVDMMIKRGVEPDVVTYTALMD 365

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G C    +  A+KVF+ M   G    V +YN LING C   ++D+A+ L ++M   GL  
Sbjct: 366 GHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIA 425

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + VT N LI+G C    ++ A  LF ++   G  P ++TY  L+D  CK   + +A  + 
Sbjct: 426 DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL 485

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            ++    +  D+  YN  I G+ R G +E  R++ + L   G  A
Sbjct: 486 KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 21/303 (6%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  M+     P+ V F  L+    K ++ S  + +  +M S GI   V T N LIN  C 
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             +L  A ++  +++  G +P+  T N LI G C +  + +A  LFD    +G  P V+T
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 219

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y TL++  CK G    A  +  SM+ +   P+V  YN +I  L ++  V    N+ +E++
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   + TYN L+ ALC   + K   +LL+EM      K  PN+V ++ ++   C++G
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV---NSKIMPNVVVFSTVVDALCKEG 336

Query: 487 KLEDANGLLNELLEKGLIPNQTTY------QIVREEMME----------KGFIPDIEGHM 530
            +  A+ +++ ++++G+ P+  TY        +R EM E          KG +P++    
Sbjct: 337 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS-- 394

Query: 531 YNI 533
           YNI
Sbjct: 395 YNI 397



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 13/262 (4%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           FNTL D          A+  F  M         V +  L+  +         ++L  +M 
Sbjct: 90  FNTLDD----------ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 139

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           + G+ P+V T N LIN FC  + +  A  +   + + G  P   T+NTLI   C EG++ 
Sbjct: 140 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG 199

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + +  +  G  PDV TY  L+ GL + GN      ++  +V    R  ++ YN ++
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 259

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +LCKD +  +A +L  EM     +   P+I TYN LI   C   + +    LLNE++  
Sbjct: 260 DSLCKDRQVTEAFNLFSEMI---TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316

Query: 502 GLIPNQTTYQIVREEMMEKGFI 523
            ++PN   +  V + + ++G I
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMI 338


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V SCN LL  LVK GK E    VY EM  R  E++  +   ++ GLCK GK+     ++E
Sbjct: 137 VFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIE 196

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
                G  P +V YN LIDGYCKKG   +   A+ +FK++   G LP   T+  +I+GFC
Sbjct: 197 KRWGRGCMPNIVFYNTLIDGYCKKGDTER---ANVLFKELKMKGFLPTVKTYGAIINGFC 253

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K        K+  EM   G+   +  YN++I+     G   EA      M+ SG  P++ 
Sbjct: 254 KKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LI G C    V KA  L +   ++GL P+ ++Y  LI  YCK+G    A  +   M
Sbjct: 314 TYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKM 373

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            +RG  PD+ TY  LI GL   G V+    + N++V  G+      YN+L+  LCK G+ 
Sbjct: 374 SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRL 433

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL EM     +   P+      L+ GF + G  E+A  L    +EKG+ P    Y
Sbjct: 434 PAAKVLLAEML---DQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGY 490

Query: 511 QIVREEMMEKGFIPD 525
             + +   + G + D
Sbjct: 491 NAMIKGYCKFGMMKD 505



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 205/431 (47%), Gaps = 41/431 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  + L+  Y K          FK     G   +V +   ++    K+GKFE V+ + 
Sbjct: 206 NIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLL 265

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  R +++++  +N +++   K G   +A+D +  M   G  P + TYNILI G C  
Sbjct: 266 VEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC-- 323

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G+++KA+ + +  ++ G+LPN+V++  LI  +CK      A+ +  +M   G    +
Sbjct: 324 -SCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDL 382

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV--------- 345
           VTY +LI+GL V G++D A+ +R++M+  G+ P+    N L++G CKK  +         
Sbjct: 383 VTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAE 442

Query: 346 --------------------------EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                                     E+A+ LF+   E+G+ P V+ YN +I  YCK G 
Sbjct: 443 MLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGM 502

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           M+DA      M+     PD  TY+ +I G  +  ++ G   +   +V    +  +VTY +
Sbjct: 503 MKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTL 562

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+   C  G   +A     +M  +  +   PN+VTY +LI  FC+   L  A     ++L
Sbjct: 563 LINGFCLSGDINRAEKTFKQMLSLRLK---PNVVTYTILIGCFCKGVNLTKACSFFEQML 619

Query: 500 EKGLIPNQTTY 510
            +  +PN  TY
Sbjct: 620 MEKCLPNDVTY 630



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 206/462 (44%), Gaps = 37/462 (8%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S L++ VK+GK      ++  +   +  +   ++ I  ++    K  K   G++  ++  
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCI--MVKGLCKEGKVEDGWKLIEKRW 199

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G   +++  N L+    K+G  E    ++KE+K +     + ++  ++NG CK GK  
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
               ++ +M   G+   +  YN +ID   K G   ++  AD V   M+++G  P+  T+N
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGC--RIEAADTV-GWMIKSGCDPDMATYN 316

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI G C    +  A ++ E+    G+    V+Y  LI+  C  G+   A+ L  +M   
Sbjct: 317 ILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSER 376

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KP++VT  ALI+G      V+ A  + + + E+G+ P    YN L+   CK+GR+  A
Sbjct: 377 GHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAA 436

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   MLD+ V PD      L+ G  R G+ E  + +    +  G+  G+V YN ++  
Sbjct: 437 KVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKG 496

Query: 444 LCKDGKSKKAVSLLDEMFK--------------------------------MEKEKKWPN 471
            CK G  K A+     M +                                M K    PN
Sbjct: 497 YCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPN 556

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +VTY +LI GFC  G +  A     ++L   L PN  TY I+
Sbjct: 557 VVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 192/406 (47%), Gaps = 31/406 (7%)

Query: 132 PHLGFEAFKRAG---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           P +G E F  A    + G   +  SC+ LLR L +   F +VE + K MK + +    ++
Sbjct: 44  PEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREA 103

Query: 189 FNFVLNGLCKAGKLNKASDIMED-MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           F+ V++     G +++A +     +K     P V + N L++   K G   K+  A  V+
Sbjct: 104 FSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG---KVEIACKVY 160

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +MV+     +  T   ++ G CK+  +    K+ E+    G    +V YN+LI+G C  
Sbjct: 161 DEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKK 220

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G  + A  L  E+   G  P V T  A+INGFCKK   E    L  ++SE+GL  S+  Y
Sbjct: 221 GDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIY 280

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +IDA  K G   +A      M+  G  PD++TYN LI G    G V     ++ + + 
Sbjct: 281 NNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIK 340

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+    V+Y  L+   CK G+  +A   LD + KM +    P++VTY  LI G    G+
Sbjct: 341 RGLLPNKVSYTPLIHNYCKQGEYLRA---LDLLIKMSERGHKPDLVTYAALIHGLIVAGE 397

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           ++ A                     VR +M+EKG +PD   ++YN+
Sbjct: 398 VDVA-------------------LTVRNKMVEKGVLPD--ANIYNV 422



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 186/423 (43%), Gaps = 73/423 (17%)

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           H   +  ++A   GL  + +S   L+    K+G++     +  +M  R  + +L ++  +
Sbjct: 329 HKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAAL 388

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GL  AG+++ A  +   M   GV P    YN+L+ G CKKG   ++  A  +  +M++
Sbjct: 389 IHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKG---RLPAAKVLLAEMLD 445

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             + P+     TL+DGF +  +   A K+FE     GI  GVV YN++I G C  G + +
Sbjct: 446 QNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKD 505

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL-SPSVITYNTLI 371
           A+                         C K+++            QGL SP   TY+T+I
Sbjct: 506 AL------------------------LCFKRMI------------QGLHSPDEFTYSTII 529

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D Y K   +  A  M   M+     P+V TY  LI G    G++        ++++  ++
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC-------- 483
             +VTY IL+G  CK     KA S  ++M     EK  PN VTYN L+ G          
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQML---MEKCLPNDVTYNYLMNGLTNNVDFVIS 646

Query: 484 -QKGKLEDANGLLNE----LLEKGLIPNQTTYQIV----------------REEMMEKGF 522
            Q+ + +  N L+ E    ++  G      +Y  +                R++MM KGF
Sbjct: 647 NQRSE-QTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGF 705

Query: 523 IPD 525
           +PD
Sbjct: 706 LPD 708



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 160/363 (44%), Gaps = 53/363 (14%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K+G+    + +  EM  + +  +      +++G  + G   +A  + E    
Sbjct: 421 NVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIE 480

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P VV YN +I GYCK    G M  A   FK M++    P+E T++T+IDG+ K  +
Sbjct: 481 KGIDPGVVGYNAMIKGYCK---FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMND 537

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A+++F  M        VVTY  LING C+ G ++ A     +M++  LKPNVVT   
Sbjct: 538 LHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTI 597

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY-------------------- 374
           LI  FCK   + KA   F+ +  +   P+ +TYN L++                      
Sbjct: 598 LIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSL 657

Query: 375 ---------------------------CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
                                      C+   ++ A  +R+ M+ +G LPD  +   L+ 
Sbjct: 658 VLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLH 717

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM---FKME 464
           GL  EG  +   N+++  +N       V Y+  + A    G++ +A  +L  +   F ++
Sbjct: 718 GLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQFSLQ 777

Query: 465 KEK 467
            E+
Sbjct: 778 MEE 780



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 32/279 (11%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           S IID     Y+K    H     F        K +V++   L+      G     E  +K
Sbjct: 526 STIID----GYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFK 581

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M   R++ N+ ++  ++   CK   L KA    E M      P  VTYN L++G     
Sbjct: 582 QMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNG----- 636

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
                               L N V F        + EN S  ++ F  M S G      
Sbjct: 637 --------------------LTNNVDFVISNQRSEQTEN-SLVLESFGMMISDGWDRRAA 675

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC-KKKLVEKARVLFDD 354
           +YNS++  LC    +  A+ LRD+MM+ G  P+ V+  AL++G C + +  +   V+   
Sbjct: 676 SYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCK 735

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           ++E+ L  +V  Y+  +DA+  +G+  +A  + +S+ D+
Sbjct: 736 LNERELQVAV-KYSEKLDAFLSQGQTSEASLILHSLADQ 773


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 209/414 (50%), Gaps = 39/414 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  SV + N ++    K G+ +D   +   M+R     +  ++N ++ GLC   K ++A
Sbjct: 225 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEA 283

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG--------------------------- 238
            +++ D    G +P V+T+  +I+GYCK   I                            
Sbjct: 284 EELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINV 343

Query: 239 -----KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                +  +A     +M  NG+ PN V + ++IDG+CK   + AA++VF  M   G    
Sbjct: 344 LIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPN 403

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             TY+SLI GL  D KL +A+AL  +M   G+ P V+T   LI G CKK   + A  LF+
Sbjct: 404 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 463

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + GL+P    YN L  A CK GR E+A++    ++ +GV+    TY  L+ G S+ G
Sbjct: 464 MMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAG 520

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           N +    ++ ++VN G +A   TY++L+ ALCK  K  +A+S+LD+M  +   K   NIV
Sbjct: 521 NTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM-TLSGVK--CNIV 577

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            Y ++I    ++GK + A  + NE++  G  P+ TTY +      + G I + E
Sbjct: 578 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 631



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 195/382 (51%), Gaps = 9/382 (2%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           KP    E    A   G   +V++   ++    K  + +D   V   M     +L+L ++ 
Sbjct: 279 KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYG 338

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            ++N L K  +  +A + + +M + G++P VV Y  +IDGYCK G +G    A  VF+ M
Sbjct: 339 VLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVG---AALEVFRLM 395

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
              G  PN  T+++LI G  +D+ +  AM +  +M   GI  GV+TY +LI G C   + 
Sbjct: 396 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 455

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  L + M  +GL P+    N L +  CK    E+A   +  +  +G+  + +TY +L
Sbjct: 456 DNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTSL 512

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +D + K G  + A  +   M++ G   D  TY+ L+  L ++  +    +I++++  +G+
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV 572

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
           +  +V Y I++  + K+GK   A S+ +EM     +   P+  TY V I  +C+ G++E+
Sbjct: 573 KCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK---PSATTYTVFISSYCKIGQIEE 629

Query: 491 ANGLLNELLEKGLIPNQTTYQI 512
           A  L+ E+   G+ P+  TY +
Sbjct: 630 AEHLIGEMERDGVAPDVVTYNV 651



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 229/491 (46%), Gaps = 59/491 (12%)

Query: 85  FLHMFVKNGKFT----SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
            +++ +K  +F     +VS +F      ++ L  N +I   ++  Y K  K     E F+
Sbjct: 340 LINVLIKKCRFKEAKETVSEMF------ANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                G + +  + + L+  L+++ K      +  +M+   I   + ++  ++ G CK  
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 453

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           + + A  + E M+  G++P    YN+L    CK G      +A+  +  +V  G++  +V
Sbjct: 454 EFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG------RAEEAYSFLVRKGVVLTKV 507

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+ +L+DGF K  N   A  + E+M + G  A   TY+ L+  LC   KL+EA+++ D+M
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
             SG+K N+V    +I+   K+   + A+ +F+++   G  PS  TY   I +YCK G++
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A  +   M   GV PDV TYN  I G    G ++   + +  +++        TY IL
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687

Query: 441 VGALCKDGKSKKAVSLLDEMF--------KMEKEKKW------------PNIVTYNVLIK 480
           +    K       +SL+D  +         +E +  W            P  VTY+ +I 
Sbjct: 688 LKHFLK-------MSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIA 740

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIP 524
           GFC+  +LE+A  L + +  K + PN+  Y ++ +                +M+E GF P
Sbjct: 741 GFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 800

Query: 525 DIEGHMYNISG 535
            +E + Y I G
Sbjct: 801 HLESYHYLIVG 811



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 177/351 (50%), Gaps = 27/351 (7%)

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G L KA  ++  M  +G      +Y ILI G C+   +    +A  +   MV++G   N 
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCV---REALVLLVMMVQDGCSLNL 195

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
            T+  LI G CK+  I  A +V EEM   G+   V TYN++I+G C  G++ +A+ ++  
Sbjct: 196 HTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 255

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M  +G  P+  T N LI G C +K  ++A  L +D   +G +P+VIT+  +I+ YCK  R
Sbjct: 256 MERNGCNPDDWTYNILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAER 314

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++DA  ++ SML      D+  Y  LI  L ++   +  +  ++E+  NG+   +V Y  
Sbjct: 315 IDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTS 374

Query: 440 LVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           ++   CK GK   A+    E+F+ ME E   PN  TY+ LI G  Q  KL  A  L+ ++
Sbjct: 375 IIDGYCKVGKVGAAL----EVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKM 430

Query: 499 LEKGLIPNQTTYQIVRE---------------EMMEK-GFIPDIEGHMYNI 533
            E G+ P   TY  + +               EMME+ G  PD +   YN+
Sbjct: 431 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA--YNV 479



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 172/334 (51%), Gaps = 7/334 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+  ++ GLC+   + +A  ++  M   G S  + TY +LI G CK+   G+++ A  V 
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKE---GRIHGARRVL 218

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M   G++P+  T+N +IDG+CK   +  A+ +   M  +G      TYN LI GLC +
Sbjct: 219 EEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE 278

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K DEA  L ++ +  G  P V+T   +ING+CK + ++ A  +   +        +  Y
Sbjct: 279 -KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             LI+   K+ R ++A    + M   G+ P+V  Y  +I G  + G V     +   + +
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G R    TY+ L+  L +D K  KA++L+    KM+++   P ++TY  LI+G C+K +
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALIT---KMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            ++A  L   + + GL P++  Y ++   + + G
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 24/334 (7%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K+   + + LL+AL K+ K  +   +  +M    ++ N+ ++  +++ + K GK + A
Sbjct: 536 GCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHA 595

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M S G  P   TY + I  YCK   IG++ +A+ +  +M  +G+ P+ VT+N  
Sbjct: 596 KSMFNEMISSGHKPSATTYTVFISSYCK---IGQIEEAEHLIGEMERDGVAPDVVTYNVF 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTY---------NSLINGLCVDG-------K 309
           I+G      +  A    + M          TY          SL++   VD        +
Sbjct: 653 INGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIE 712

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           LD    L + M+  GL P  VT +++I GFCK   +E+A VLFD +  + +SP+   Y  
Sbjct: 713 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTM 772

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C       A +    M++ G  P + +Y+ LI GL  EG+ +  +++  +L+  G
Sbjct: 773 LIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLL--G 830

Query: 430 MR---AGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           M       V + IL   L K G       LL  M
Sbjct: 831 MEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAM 864



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 4/186 (2%)

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           V G L +A  L   M   G + N  +   LI G C+ + V +A VL   + + G S ++ 
Sbjct: 137 VGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLH 196

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY  LI   CKEGR+  A  +   M  RGV+P V TYN +I G  + G ++    I   +
Sbjct: 197 TYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 256

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
             NG      TYNIL+  LC + K  +A  LL++          P ++T+  +I G+C+ 
Sbjct: 257 ERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFT---PTVITFTNIINGYCKA 312

Query: 486 GKLEDA 491
            +++DA
Sbjct: 313 ERIDDA 318


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 201/390 (51%), Gaps = 6/390 (1%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             F    +    G +    +   L+R +  EGK  +  +++ +M       ++ ++  ++
Sbjct: 114 FAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLI 173

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLCK G  + A  ++  M      P V  YN +ID  CK   + + +    +F +MV  
Sbjct: 174 NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN---LFSEMVTK 230

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI P+  T+N+LI   C          +  EM    I   VV++N++++ LC +GK+ EA
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             + D+M+  G++PNVVT  AL++G C    +++A  +FD +  +G  P+VI+YNTLI+ 
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK  R++ A  +   M  + ++PD  TY+ LI GL     ++    + +E+V       
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           LVTY IL+  LCK+    +A++LL     +E     P+I   N+ I G C+ G+LE A  
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLK---AIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           L + L  KGL P+  TY I+   +  +G +
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLL 497



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 208/396 (52%), Gaps = 22/396 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V++   L+  L K G       +   M ++  + N+ ++N +++ LCK  ++ +A
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++  +M + G+SP + TYN LI   C    + +      +  +MV++ I+P+ V+FNT+
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCN---LCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK+  ++ A  V ++M   G+   VVTY +L++G C+  ++DEAV + D M+  G 
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV++ N LING+CK + ++KA  LF ++  Q L P  +TY+TLI   C   R++DA A
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+    +P++ TY  L+  L +   +     ++  +  + +   +   NI +  +C
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 457

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           + G+ + A  L      +  +   P++ TY+++I G C++G L++A+ L  E+ E G   
Sbjct: 458 RAGELEAARDLFS---NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514

Query: 506 NQTTYQIVR----------------EEMMEKGFIPD 525
           N   Y  +                 +EM+ +GF  D
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 550



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 189/357 (52%), Gaps = 17/357 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A +T  DSLC++  + +               F  F      G+   + + N L+ AL  
Sbjct: 203 AYNTIIDSLCKDRQVTE--------------AFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             +++ V  +  EM   +I  ++ SFN V++ LCK GK+ +A D+++ M   GV P VVT
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           Y  L+DG+C    + +M +A  VF  MV  G +PN +++NTLI+G+CK + I  AM +F 
Sbjct: 309 YTALMDGHCL---LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFG 365

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM    +    VTY++LI+GLC   +L +A+AL  EM+A    PN+VT   L++  CK +
Sbjct: 366 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 425

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            + +A  L   I    L P +   N  ID  C+ G +E A  + +++  +G+ PDV TY+
Sbjct: 426 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 485

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +I GL R G ++    +  E+  NG       YN +     ++ ++ +A+ LL EM
Sbjct: 486 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              +F R        S +  N+LL ++ K      +  +  +M    I  N+ + + ++N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C   ++  A  ++  +  LG  P   T+  LI G   +G IG+   A  +F  M+  G
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGE---ALHLFDKMIGEG 161

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ VT+ TLI+G CK  N SAA+++   M        V  YN++I+ LC D ++ EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  EM+  G+ P++ T N+LI+  C     +    L +++ +  + P V+++NT++DA 
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG++ +A  + + M+ RGV P+V TY  L+ G      ++    + + +V  G    +
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++YN L+   CK  +  KA+ L  EM + E     P+ VTY+ LI G C   +L+DA  L
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQE---LIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
            +E++    IPN  TY+I+ + + +  ++ +    +  I G++
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 198/401 (49%), Gaps = 14/401 (3%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDM 121
           RLL S+V     P + ++   +    K+ + T    +F  + T     D    NS+I  +
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
             L   K++   L         D  +   V+S N ++ AL KEGK  +   V  +M +R 
Sbjct: 247 CNLCEWKHVATLL-----NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +E N+ ++  +++G C   ++++A  + + M   G  P V++YN LI+GYCK   I ++ 
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK---IQRID 358

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA  +F +M    ++P+ VT++TLI G C  E +  A+ +F EM +      +VTY  L+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + LC +  L EA+AL   +  S L P++  +N  I+G C+   +E AR LF ++S +GL 
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P V TY+ +I+  C+ G +++A  +   M + G   +   YN +  G  R         +
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + E+V  G  A   T  + V  L  DG  +    +L E  +
Sbjct: 539 LQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 13/283 (4%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +M    A F  +  N      + FNT IDG         A+  F  M         V +N
Sbjct: 16  QMLSLLAHFLSLSHNRFHSKSLHFNT-IDG---------AISSFNRMLRMQPPPSTVDFN 65

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            L+  +         ++L  +M + G+ PN+ T + LIN FC    V  A  +   I + 
Sbjct: 66  KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P   T+ TLI     EG++ +A  + + M+  G  PDV TY  LI GL + GN    
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++  +V    +  +  YN ++ +LCKD +  +A +L  EM     +   P+I TYN L
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV---TKGISPDIFTYNSL 242

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I   C   + +    LLNE+++  ++P+  ++  V + + ++G
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V + N ++    K  + E    V   MK R    ++ ++N ++  LC   KL  A  
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ +      P V+TY ILI+    +GGI +  K   + ++M+  G+LP+  T+N +I 
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK---LLEEMLARGLLPDMYTYNAIIR 260

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A ++   + S G    V++YN L+      GK DE   L  EM + G +P
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT + LI+  C+   +++A  +   + E+ L+P   +Y+ LI A CKEGR++ A  + 
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL---------------------- 425
           + M+  G LPD+  YN ++A L + GN      I N+L                      
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440

Query: 426 -------------VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                        ++ G+    +TYN L+  LC+DG  ++A+ LLD+   ME+    P +
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDD---MEQSGFRPTV 497

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           ++YN+++ G C+  +++DA G+  E++EKG  PN+TTY ++ E
Sbjct: 498 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 194/355 (54%), Gaps = 6/355 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   L+ A + EG   +   + +EM  R +  ++ ++N ++ G+CK G + +A++++
Sbjct: 216 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 275

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             + S G  P V++YNIL+  +  +G   K  + + +  +M   G  PN+VT++ LI   
Sbjct: 276 TSLTSKGCEPDVISYNILLRAFLNQG---KWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   I  A+ V + M    +     +Y+ LI+ LC +G+LD A+ + D M+++G  P++
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N ++   CK     +A  +F+ +   G  P+V +YNT+I A    G    A  M  +
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +G+ PD  TYN LI+ L R+G VE    +++++  +G R  +++YNI++  LCK  +
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              A+ +  EM  +EK  + PN  TY +LI+G    G   +A  L N L  + +I
Sbjct: 513 IDDAIGMFAEM--IEKGCR-PNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 222/460 (48%), Gaps = 58/460 (12%)

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG---DYGLKSSVLSCNQLLRALVKEGKFED 169
           CRN    D     Y     P +G  A  R      Y  + + L   +LL    K GKF +
Sbjct: 43  CRNPNPND----GYNSRNSPKVGVSAEARPAHLQSYDFRETHLM--KLLNRSCKAGKFNE 96

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
             Y  + +  +    ++     ++ G      + KAS +ME ++S    P V  YN +I 
Sbjct: 97  SLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAYNAVIS 155

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK   + ++  A  V   M   G LP+ VT+N +I   C    +  A+ V +++    
Sbjct: 156 GFCK---VNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDN 212

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               V+TY  LI    V+G ++EA+ L +EM+A GL P++ T NA+I G CK+ +VE+A 
Sbjct: 213 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 272

Query: 350 VLFDDISEQGLSPSVITYNTLIDAY----------------------------------- 374
            L   ++ +G  P VI+YN L+ A+                                   
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C+ GR+++A ++   M+++ + PD  +Y+ LI+ L +EG ++    IM+ +++NG    +
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V YN ++ ALCK+G + +A+ + +++  M      PN+ +YN +I      G    A G+
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCP---PNVSSYNTMISALWSCGDRSRALGM 449

Query: 495 LNELLEKGLIPNQTTYQ-----IVREEMMEK--GFIPDIE 527
           +  ++ KG+ P++ TY      + R+ ++E+  G + D+E
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDME 489



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 157/268 (58%), Gaps = 3/268 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +  V+S N LLRA + +GK+++ E +  EM  R  E N  +++ +++ LC+ G++++A
Sbjct: 282 GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 341

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++ M    ++P   +Y+ LI   CK+G   ++  A  +   M+ NG LP+ V +NT+
Sbjct: 342 ISVLKVMIEKELTPDTYSYDPLISALCKEG---RLDLAIGIMDYMISNGCLPDIVNYNTI 398

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +   CK+ N + A+++F ++   G    V +YN++I+ L   G    A+ +   M++ G+
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T N+LI+  C+  LVE+A  L DD+ + G  P+VI+YN ++   CK  R++DA  
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           M   M+++G  P+ +TY  LI G+   G
Sbjct: 519 MFAEMIEKGCRPNETTYILLIEGIGFAG 546



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   + + N ++R + KEG  E    +   +  +  E ++ S+N +L      GK ++ 
Sbjct: 247 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M S G  P  VTY+ILI   C+    G++ +A +V K M+E  + P+  +++ L
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCR---FGRIDEAISVLKVMIEKELTPDTYSYDPL 363

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   CK+  +  A+ + + M S+G    +V YN+++  LC +G  ++A+ + +++   G 
Sbjct: 364 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 423

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV + N +I+         +A  +   +  +G+ P  ITYN+LI   C++G +E+A  
Sbjct: 424 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIG 483

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M   G  P V +YN ++ GL +   ++    +  E++  G R    TY +L+  + 
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 543

Query: 446 KDGKSKKAVSLLDEMF 461
             G   +A+ L + +F
Sbjct: 544 FAGWRTEAMELANSLF 559


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 192/345 (55%), Gaps = 6/345 (1%)

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
            LN  ++  ++NGLCK G+   A  ++  ++   V+  VV Y+ +IDG CK   +   Y 
Sbjct: 155 HLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAY- 213

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              ++ +M+   I P  VTF++LI GFC       A ++F EM    I     T+N L++
Sbjct: 214 --GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            LC +GK+ EA  +   MM  G++P VVT N L++G+C    V KA+ +   IS   ++P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +  +YN +I+ +CK   +++A  + + M  RG+ P   TYN LI GL + G +     ++
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+ NN + A +VTYN L+   CK+    KA++L+    K+++    PN+ TYN+LI G 
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVK---KIKEHGIQPNMCTYNILIDGL 448

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           C+ G+L++A  +  +LL KG   N  TY I+   + ++G   + E
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAE 493



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 203/365 (55%), Gaps = 8/365 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K G+      V ++++ + +  N+  ++ +++GLCK   +  A  +  +M    
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P VVT++ LI G+C    +GK   A  +F +MV   I P+  TFN L+D  CK+  I 
Sbjct: 224 IPPTVVTFSSLIYGFCI---VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  V   M   G+   VVTYN+L++G C+  ++ +A  +   +    + PN  + N +I
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NGFCK K+V++A  LF ++  +G++P  +TYN+LID  CK GR+  A+ + + M +  + 
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            D+ TYN LI    +  +V+    ++ ++  +G++  + TYNIL+  LCK G+ K A  +
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV 460

Query: 457 L-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             D + K      W    TYN++I G C++G  ++A  LL+++ + G+IP+  TY+ + +
Sbjct: 461 FQDLLIKGYNVNAW----TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516

Query: 516 EMMEK 520
            +  K
Sbjct: 517 ALFHK 521



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 192/356 (53%), Gaps = 6/356 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           ++V+  + ++  L K+    D   +Y EM  +RI   + +F+ ++ G C  GK   A  +
Sbjct: 191 TNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRL 250

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
             +M    ++P   T+NIL+D  CK+G   K+ +A  V   M++ G+ P  VT+NTL+DG
Sbjct: 251 FNEMVMKNINPDAYTFNILVDALCKEG---KIKEAKNVIAVMMKEGVEPTVVTYNTLMDG 307

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           +C    +  A  V   +    +A    +YN +ING C    +DEA+ L  EM   G+ P+
Sbjct: 308 YCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPH 367

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT N+LI+G CK   +  A  L D++    +   ++TYN+LID +CK   ++ A A+  
Sbjct: 368 KVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVK 427

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            + + G+ P++ TYN LI GL + G ++  +++  +L+  G      TYNI++  LCK+G
Sbjct: 428 KIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEG 487

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              +A  LL    KME     P+ VTY  +I+    K + E A  LL E++ KG++
Sbjct: 488 LFDEAEVLLS---KMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 199/359 (55%), Gaps = 26/359 (7%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLML---AYVKNMKPHL--------GF----- 136
           GK  + + + +  ST  D LC++ ++ D   L     VK + P +        GF     
Sbjct: 186 GKLVNTNVVMY--STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGK 243

Query: 137 --EAFKRAGDYGLKS---SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
             +AF+   +  +K+      + N L+ AL KEGK ++ + V   M +  +E  + ++N 
Sbjct: 244 FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNT 303

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +++G C   ++ KA  ++  +  + V+P   +YNI+I+G+CK   I  + +A  +F +M 
Sbjct: 304 LMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK---IKMVDEALCLFHEMC 360

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
             GI P++VT+N+LIDG CK   I  A ++ +EM ++ I A +VTYNSLI+  C +  +D
Sbjct: 361 CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVD 420

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+AL  ++   G++PN+ T N LI+G CK   ++ A+ +F D+  +G + +  TYN +I
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMI 480

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  CKEG  ++A  + + M D G++PD  TY  +I  L  +   E  + ++ E+V  G+
Sbjct: 481 NGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 77/152 (50%), Gaps = 8/152 (5%)

Query: 110 DSLCRNSIIIDM-----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D +  N I  D+     L+  + KN          K+  ++G++ ++ + N L+  L K 
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ ++ + V++++  +   +N  ++N ++NGLCK G  ++A  ++  M+  G+ P  VTY
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
             +I     K    +  KA  + ++MV  G++
Sbjct: 512 ETIIQALFHK---DENEKAQKLLREMVIKGVV 540



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 23/213 (10%)

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           R   M S  +P + T  ++ NGF    +V+ A + F+ + +   +PS++ +N ++    K
Sbjct: 24  RRSPMPSSAEP-LKTVLSIPNGF----VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIK 78

Query: 377 -EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
            +       ++   M  +GV PD+ T + LI      G +    ++  +++  G      
Sbjct: 79  TKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMG------ 132

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
                   LC +GK  +A+   D +  +       N VTY +LI G C+ G+   A  +L
Sbjct: 133 --------LCLNGKVNEALLFHDHVLALGFHL---NHVTYGILINGLCKMGQTRAALQVL 181

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            ++  K +  N   Y  + + + +   + D  G
Sbjct: 182 RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYG 214


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 206/396 (52%), Gaps = 41/396 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++  ++LL A+ K  K+E V  +++ ++   I  +L SF+ +++  C+  +L+ A   +
Sbjct: 72  SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCL 131

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M  LG  P +VT+  L++G+C    + ++ +A ++   +V  G  PN V +NT+ID  
Sbjct: 132 GKMMKLGFEPSIVTFGSLVNGFCH---VNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSL 188

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-------------------- 309
           C++  +  A+ V   M   GI   V+TYNSLI  L   GK                    
Sbjct: 189 CENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDV 248

Query: 310 ---------------LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
                          L EA    DEM+   + PN+VT N+LING C   L+++A+ + + 
Sbjct: 249 ITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNF 308

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P+ +TYNTL++ YCK  R++DA  +   M   GV  D  TYN L  G  + G 
Sbjct: 309 MVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQ 368

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
                 ++  +V+ G+   + T+N+L+  LC+ GK +KA+  L+++   +K +    I+T
Sbjct: 369 FNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL---QKSETVVGIIT 425

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           YN++IKG C+  K+EDA  L   L  KG+ P+  TY
Sbjct: 426 YNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 227/460 (49%), Gaps = 26/460 (5%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           L  FC    E R   S++   RLL ++   KKY  + S      ++ +   +S   ++ S
Sbjct: 58  LTLFC-DMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLF----RHIEILGISHDLYSFS 112

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           T  D  CR S              +  L      +    G + S+++   L+       +
Sbjct: 113 TLIDCFCRCS--------------RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 158

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            ++   +  ++     E N+  +N +++ LC+  +++ A D++  M+ +G+ P V+TYN 
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LI      G  G   +   +  DM+  GI P+ +TF+ +ID F K+  +  A K ++EM 
Sbjct: 219 LITRLFHSGKWGVSAR---ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMI 275

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +   +VTYNSLINGLC+ G LDEA  + + M++ G  PN VT N L+NG+CK K V+
Sbjct: 276 QRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVD 335

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            A  +   +S  G+     TYNTL   YC+ G+   A  +   M+  GVLPD+ T+N L+
Sbjct: 336 DAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLL 395

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL   G +E     + +L  +    G++TYNI++  +CK  K + A  L      +  +
Sbjct: 396 DGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLF---CSLALK 452

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL-LEKGLIP 505
              P+++TY  ++ G  +K    +A+ L  ++  + GL+P
Sbjct: 453 GVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 17/389 (4%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F AF    DY          + LR+ +   KF D   ++ +M   R   ++  F+ +L  
Sbjct: 32  FGAFSGGSDY---------RERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVA 82

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           + K  K      +   ++ LG+S  + +++ LID +C+     ++  A +    M++ G 
Sbjct: 83  IAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCR---CSRLSLALSCLGKMMKLGF 139

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VTF +L++GFC    I  AM + +++   G    VV YN++I+ LC + ++D A+ 
Sbjct: 140 EPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALD 199

Query: 316 LRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           + + M   G++P+V+T N+LI   F   K    AR+L  D+   G+ P VIT++ +ID +
Sbjct: 200 VLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL-SDMMRMGIHPDVITFSAMIDVF 258

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            KEG++ +A    + M+ R V P++ TYN LI GL   G ++  + ++N +V+ G     
Sbjct: 259 GKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNA 318

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYN LV   CK  +   A+ +L     M  +    +  TYN L +G+CQ G+   A  +
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKIL---CVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKV 375

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           L  ++  G++P+  T+ ++ + + E G I
Sbjct: 376 LARMVSCGVLPDIYTFNMLLDGLCEHGKI 404



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +  DA  +   M +   LP +  ++ L+  +++    E V ++   +   G+   L +++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   C+  +   A+S L +M K+  E   P+IVT+  L+ GFC   ++++A  L++++
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFE---PSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIP---DIEGHM 530
           +  G  PN   Y  + + + E   +    D+  HM
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM 204


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 246/514 (47%), Gaps = 53/514 (10%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           L +F +++K  +   ++     L+  L+ +   P+ +  L   ++    T +      LS
Sbjct: 95  LDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLS 154

Query: 107 TCSDSLC----RNSIIIDML---MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
             + +      R+   +D+L   + +  +++  H  F+ F      G+  S+ SCN L+ 
Sbjct: 155 EIASAFLELGERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMS 214

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           +LVK  +      V+  M R  + +++ ++   +N  CK GK+++A  +   M   GV P
Sbjct: 215 SLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLP 274

Query: 220 KVVTYNILIDGYCKKGGIGK--MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            VVTYN LIDG CK G + +  M+K       MVEN + P+ VT+  L++G  K E    
Sbjct: 275 NVVTYNNLIDGLCKSGRLEEALMFKG-----RMVENKVNPSLVTYGILVNGLVKFEKFDE 329

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  V  EM S G +     +N+LI+G    G +D+A+ +RD+M   GLKPN VT N L+ 
Sbjct: 330 ANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQ 389

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR---- 393
           GFC+   +E+A  + + +    LS +    + ++   CK  + + A  +  ++L R    
Sbjct: 390 GFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKV 449

Query: 394 --------------------------------GVLPDVSTYNCLIAGLSREGNVEGVRNI 421
                                           G+  + +T N L+ GL   GN+E V  +
Sbjct: 450 NDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPV 509

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             E+V  G+    ++YN L+   CK GK ++A  L +   KM K+   P+  TYN L+KG
Sbjct: 510 CKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE---KMMKQGFKPDTYTYNFLMKG 566

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
              KGK++D   +L+E  + G++PN  TY ++ E
Sbjct: 567 LADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 244/485 (50%), Gaps = 38/485 (7%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
           E + + SL+  G L++ LV  +K+ +  S L      G F+    +F+AL    D   R 
Sbjct: 304 ENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKG-FSPNEFVFNALI---DGYSRK 359

Query: 116 SIIIDMLML---AYVKNMKPHL--------GF------EAFKRAGDYGLKSSVLS----- 153
             + D L +     +K +KP+         GF      E  ++  +Y L S+VLS     
Sbjct: 360 GNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY-LLSNVLSVNEDA 418

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI---ME 210
           C+ +L  L K  KF+    + K +  R I++N      ++ GLCK GK  +A D+   + 
Sbjct: 419 CSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLA 478

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           D K  G++    T N L+ G C++G + +++    V K+MVE G++ + +++NTLI G C
Sbjct: 479 DKK--GLAANTTTSNALLYGLCERGNMEEVF---PVCKEMVERGLVLDGISYNTLIFGCC 533

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K   I  A K+ E+M   G      TYN L+ GL   GK+D+   +  E    G+ PN+ 
Sbjct: 534 KSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY 593

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T   ++ G+C    ++ A  LF+ +    +  S + YN LI A+ K G   +AF +R++M
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
               + P + TY+ +I G+     VE  + I  E+ N G+   +  Y  L+G  CK G+ 
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +  S+L E   M      PN +TY ++I G+C+ G  ++A  LLNE++  G+ P+  TY
Sbjct: 714 DQIESILQE---MTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTY 770

Query: 511 QIVRE 515
            ++++
Sbjct: 771 TVLQK 775



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 204/409 (49%), Gaps = 18/409 (4%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           +L+ FC + +  +A   L      L S V++         LH+  K+ KF S   I  AL
Sbjct: 387 LLQGFCRTNQMEQAEQVL----EYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKAL 442

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNM-KPHLGFEA----FKRAGDYGLKSSVLSCNQLLRA 160
                 L RN  + D L+   V  + K     EA    F+ A   GL ++  + N LL  
Sbjct: 443 ------LLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYG 496

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L + G  E+V  V KEM  R + L+  S+N ++ G CK+GK+ +A  + E M   G  P 
Sbjct: 497 LCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPD 556

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
             TYN L+ G   KG   KM     V  +  ++G++PN  T+  +++G+C  + I  A+ 
Sbjct: 557 TYTYNFLMKGLADKG---KMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVS 613

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F ++  + +    V YN LI      G   EA  LRD M +S + P + T +++I+G C
Sbjct: 614 LFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMC 673

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
              LVE+A+ +F+++  +GL P+V  Y  LI  YCK G+M+   ++   M    + P+  
Sbjct: 674 CNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKI 733

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           TY  +I G  + GN +    ++NE++ NG+    VTY +L    CK+ +
Sbjct: 734 TYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENE 782



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 228/483 (47%), Gaps = 63/483 (13%)

Query: 110 DSLCRNSIIIDMLMLA-----YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           D++CR  ++ID+   A     Y K  K       F + G+ G+  +V++ N L+  L K 
Sbjct: 230 DAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKS 289

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ E+       M   ++  +L ++  ++NGL K  K ++A+ ++ +M S G SP    +
Sbjct: 290 GRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVF 349

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           N LIDGY +KG    M  A  V  DM   G+ PN VT NTL+ GFC+   +  A +V E 
Sbjct: 350 NALIDGYSRKGN---MDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY 406

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEA-----------VALRDEMMA----------- 322
           + S+ ++      + +++ LC   K D A           + + D ++            
Sbjct: 407 LLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGK 466

Query: 323 --------------SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
                          GL  N  TSNAL+ G C++  +E+   +  ++ E+GL    I+YN
Sbjct: 467 HLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYN 526

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI   CK G++E+AF ++  M+ +G  PD  TYN L+ GL+ +G ++ V  +++E  ++
Sbjct: 527 TLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDH 586

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   + TY +++   C   +   AVSL +++   + E  +   V YN+LI    + G  
Sbjct: 587 GVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSY---VVYNILIAAHSKAGNF 643

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYN 532
            +A  L + +    + P   TY                  + EEM  +G +P++  +   
Sbjct: 644 TEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTAL 703

Query: 533 ISG 535
           I G
Sbjct: 704 IGG 706



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 201/424 (47%), Gaps = 59/424 (13%)

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           + +  ++   + E+  R     LD   ++L    +    + A D      S GV P + +
Sbjct: 150 DARLSEIASAFLELGERS-HGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKS 208

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
            N L+    K   + K ++   VF  M   G+L +  T+ T I+ +CK   I  A+ +F 
Sbjct: 209 CNFLMSSLVKSNELHKSFR---VFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFL 265

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           +MG  G+   VVTYN+LI+GLC  G+L+EA+  +  M+ + + P++VT   L+NG  K +
Sbjct: 266 KMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFE 325

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             ++A  +  ++  +G SP+   +N LID Y ++G M+DA  +R+ M  +G+ P+  T+N
Sbjct: 326 KFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHN 385

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRA--------------------------GLVTY 437
            L+ G  R   +E    ++  L++N +                             L+  
Sbjct: 386 TLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLR 445

Query: 438 NI---------LVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGK 487
           NI         LV  LCK GK  +A+ L    F++  +K    N  T N L+ G C++G 
Sbjct: 446 NIKVNDSLLTLLVCGLCKCGKHLEAIDL---WFRLADKKGLAANTTTSNALLYGLCERGN 502

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMY 531
           +E+   +  E++E+GL+ +  +Y  +                +E+MM++GF PD   + +
Sbjct: 503 MEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNF 562

Query: 532 NISG 535
            + G
Sbjct: 563 LMKG 566



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 116/241 (48%), Gaps = 13/241 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
           GR+LH        P I ++  M   +    +  +  ++F+ L      L  + ++ ++L+
Sbjct: 577 GRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVEL--SYVVYNILI 634

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
            A+ K       F+         +  ++ + + ++  +      E+ + +++EM+   + 
Sbjct: 635 AAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 694

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+  +  ++ G CK G++++   I+++M S  + P  +TY I+IDGYCK   +G   +A
Sbjct: 695 PNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCK---MGNTKEA 751

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
             +  +M+ NGI P+ VT+  L  G+CK+  +   ++     G   +    +TY +L++ 
Sbjct: 752 TKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ-----GDTAVPLEEITYTTLVDK 806

Query: 304 L 304
           L
Sbjct: 807 L 807


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 186/375 (49%), Gaps = 43/375 (11%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M + +  +  D+++FV+  L KAG L +A ++ E MKS    P +VTYN+LI+  C  G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 237 IGKMYKADAVFKDM-VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            GK   A  +F+ M  E  + P+  T+NTLI G C   N   A K+  EM    IAA V 
Sbjct: 61  FGK---ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVF 117

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           TY+S+I  L  + K +E+  + +EMMA+G  P+V   N ++ GF +   +EKAR ++  +
Sbjct: 118 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177

Query: 356 SEQGLS-------------------------------------PSVITYNTLIDAYCKEG 378
            E G                                       P+VIT++TLI   C+ G
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +E A  +  SML+ G  P+  TY  LIAGL R   V   R +  ++    +    V YN
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+   CK G   +A  L  EM      +  P IVT+N LI GFC+ GKL  AN L+ E+
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQ--PTIVTFNTLIDGFCKLGKLGRANELVAEM 355

Query: 499 LEKGLIPNQTTYQIV 513
             KGL  +  TY+I+
Sbjct: 356 GTKGLAADTCTYRIL 370



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 204/380 (53%), Gaps = 11/380 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L   G  E    +  EM+ + I  N+ +++ ++  L K  K  ++  ++E+M +
Sbjct: 85  NTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA 144

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P V  +N ++ G+ +      M KA  V++ MVE+G  P+ V+++ LI G  K   
Sbjct: 145 AGCNPDVFAFNGVMQGFARS---NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 201

Query: 275 ISAAMKVFEEMG--SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +  ++K+  EM   + G    V+T+++LI+GLC  G+L++A+ +   M+ +G KPN  T 
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML- 391
             LI G C+ + V +AR LF+ +++  + P  + YN+LI  YCK G M++A  +   M  
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 321

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G+ P + T+N LI G  + G +     ++ E+   G+ A   TY IL+  L +  K  
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381

Query: 452 KAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A+    E++K  +EKK+  + V+    + G C+ G ++ A  +     + G +PN  T+
Sbjct: 382 EAL----EVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437

Query: 511 QIVREEMMEKGFIPDIEGHM 530
           +I+ E +++ G + D +  M
Sbjct: 438 RILSESLIKLGRVEDAQKLM 457



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 9/355 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  + ++V + + ++++LVKE K E+   V +EM       ++ +FN V+ G  ++  + 
Sbjct: 109 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNME 168

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVT 261
           KA ++ + M   G  P  V+Y+ILI G  K   IGK+ ++  +  +M     G +PN +T
Sbjct: 169 KAREVYQHMVESGYKPDNVSYHILIHGLAK---IGKLDESLKILSEMAMRAAGYVPNVIT 225

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F+TLI G C+   +  A++VF  M   G      TY +LI GLC   K+ +A  L ++M 
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS-EQGLSPSVITYNTLIDAYCKEGRM 380
            + + P+ V  N+LI G+CK+  +++A  L+ ++S   GL P+++T+NTLID +CK G++
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             A  +   M  +G+  D  TY  LIAGLSR   ++    +  ++         V+    
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           VG LCK G   +A ++ +      K    PN  T+ +L +   + G++EDA  L+
Sbjct: 406 VGGLCKTGNIDQAYAVFE---ATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 6/347 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N      ++ + VK  KP   ++  +     G    V + N +++   +    E    VY
Sbjct: 115 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 174

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM--KSLGVSPKVVTYNILIDGYC 232
           + M     + +  S++ +++GL K GKL+++  I+ +M  ++ G  P V+T++ LI G C
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC 234

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +    G++ KA  VF  M+E G  PN+ T+ TLI G C+ E +  A ++FE+M    I  
Sbjct: 235 R---TGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPP 291

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V YNSLI G C  G +DEA  L  EM   +GL+P +VT N LI+GFCK   + +A  L
Sbjct: 292 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 351

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
             ++  +GL+    TY  LI    +  ++++A  +   M ++  L D  +    + GL +
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
            GN++    +      +G      T+ IL  +L K G+ + A  L++
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 15/319 (4%)

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            Y+ ++    K G + +   A  VF+ M     +P+ VT+N LI+  C       A+ +F
Sbjct: 12  AYDFVVQSLAKAGMLAQ---ALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68

Query: 283 EEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           + M     +     TYN+LI+GLC  G  + A  L  EM    +  NV T +++I    K
Sbjct: 69  QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
           +   E++  + +++   G +P V  +N ++  + +   ME A  +   M++ G  PD  +
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAG-----LVTYNILVGALCKDGKSKKAVSL 456
           Y+ LI GL++ G ++    I++E+    MRA      ++T++ L+  LC+ G+ +KA+ +
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEM---AMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
              M +   +   PN  TY  LI G C+  K+  A  L  ++ +  + P+   Y  +   
Sbjct: 246 FGSMLEAGCK---PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 302

Query: 517 MMEKGFIPDIEGHMYNISG 535
             ++G + + E     +SG
Sbjct: 303 YCKRGSMDEAEKLYREMSG 321



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 19/275 (6%)

Query: 61  HSLLLTGRLLHSLVV--------AKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS 109
           H L   G+L  SL +        A   P + +F   +H   + G+      +F ++    
Sbjct: 194 HGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML--- 250

Query: 110 DSLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           ++ C+ N      L+    +  K     E F++     +    ++ N L+    K G  +
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 310

Query: 169 DVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           + E +Y+EM     ++  + +FN +++G CK GKL +A++++ +M + G++    TY IL
Sbjct: 311 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I G  +     K+ +A  V+K M E   L + V+  + + G CK  NI  A  VFE    
Sbjct: 371 IAGLSRAT---KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 427

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            G      T+  L   L   G++++A  L +   A
Sbjct: 428 SGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKA 462


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 200/380 (52%), Gaps = 23/380 (6%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GK+E    V +EM  +    +  +++ VL  LC A K+  A  + E+MK  G+ 
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLV 515

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
             V TY I++D +CK G I +   A   F +M E G  PN VT+  LI  + K + +S A
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQ---ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--------------- 323
            ++FE M S G    +VTY++LI+G C  G++++A  + + M  S               
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDD 632

Query: 324 --GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
               +PNVV   AL++GFCK   VE+AR L D +S +G  P+ I Y+ LID  CK G+++
Sbjct: 633 DNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 692

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  ++  M + G    + TY+ LI    +    +    ++++++ N     +V Y  ++
Sbjct: 693 EAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 752

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCK GK+ +A  L   M  ME++   PN+VTY  +I GF + GK+E    LL  +  K
Sbjct: 753 DGLCKVGKTDEAYKL---MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSK 809

Query: 502 GLIPNQTTYQIVREEMMEKG 521
           G+ PN  TY+++ +   + G
Sbjct: 810 GVAPNYVTYRVLIDHCCKNG 829



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 211/416 (50%), Gaps = 28/416 (6%)

Query: 123 MLAYVKNM-KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           +L Y+ N  K  L F  F+     GL + V +   ++ +  K G  E     + EM+   
Sbjct: 489 VLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
              N+ ++  +++   KA K++ A+++ E M S G  P +VTY+ LIDG+CK G   +M 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG---QME 605

Query: 242 KADAVFKDMV-----------------ENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           KA  +F+ M                  +N   PN V +  L+DGFCK   +  A K+ + 
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDA 665

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G     + Y++LI+GLC  GKLDEA  ++ EM   G    + T ++LI+ + K K 
Sbjct: 666 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKR 725

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            + A  +   + E   +P+V+ Y  +ID  CK G+ ++A+ +   M ++G  P+V TY  
Sbjct: 726 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 785

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I G  R G +E    ++  + + G+    VTY +L+   CK+G    A +LL+EM    
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM---- 841

Query: 465 KEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           K+  WP +   Y  +I+GF    +  ++ GLL+E+ +    P  + Y+++ + +++
Sbjct: 842 KQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIK 895



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 211/508 (41%), Gaps = 106/508 (20%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
            +++L+  Y ++    +  E   R  D+  + S  + N L++A +K    +    V++EM
Sbjct: 202 FLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREM 261

Query: 178 KRRRIELN-----------------------LDSFNFV---------LNGLCKAGKLNKA 205
               + ++                       +++ NFV         ++GLC+A    +A
Sbjct: 262 SLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 206 SDIMEDMKSLGVSPKVVTY-----------------------------------NILIDG 230
            D +  M++    P VVTY                                   N L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN------ISAAMKVFEE 284
           YC  G     YK   + K MV+ G  P  V +N LI   C D++      +  A K + E
Sbjct: 382 YCTSGDHSYAYK---LLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSE 438

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M + G+    +  +S    LC  GK ++A ++  EM+  G  P+  T + ++   C    
Sbjct: 439 MLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASK 498

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +E A +LF+++   GL   V TY  ++D++CK G +E A    N M + G  P+V TY  
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM---- 460
           LI    +   V     +   +++ G    +VTY+ L+   CK G+ +KA  + + M    
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618

Query: 461 --------FKM--EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                   FK   +   + PN+V Y  L+ GFC+  ++E+A  LL+ +  +G  PNQ  Y
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678

Query: 511 ----------------QIVREEMMEKGF 522
                           Q V+ EM E GF
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGF 706



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 23/342 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---GIGKMYKADA 245
           FN +++  C +G  + A  +++ M   G +P  V YNILI   C          +  A+ 
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
            + +M+  G++ N++  ++     C       A  V  EM   G      TY+ ++  LC
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLC 494

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
              K++ A  L +EM   GL  +V T   +++ FCK  L+E+AR  F+++ E G +P+V+
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY  LI AY K  ++  A  +  +ML  G LP++ TY+ LI G  + G +E    I   +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614

Query: 426 V-----------------NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
                             +N  R  +V Y  L+   CK  + ++A  LLD    M  E  
Sbjct: 615 CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLD---AMSMEGC 671

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN + Y+ LI G C+ GKL++A  +  E+ E G      TY
Sbjct: 672 EPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTY 713



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 42/298 (14%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+  L K GK ++ + V  EM        L +++ +++   K  + + AS ++  M  
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 738

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
              +P VV Y  +IDG CK G   + YK   + + M E G  PN VT+  +IDGF +   
Sbjct: 739 NSCAPNVVIYTEMIDGLCKVGKTDEAYK---LMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I   +++ E MGS G+A   VTY  LI+  C +G LD A  L +EM  +    +      
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVI----------------------------- 365
           +I GF  K+ +E   +L D+I +   +P +                              
Sbjct: 856 VIEGF-NKEFIESLGLL-DEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFS 913

Query: 366 --------TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
                   TYN+LI++ C   +++ AF + + M  +GV+P++ T+  LI GL R   +
Sbjct: 914 ATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKI 971



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 190/478 (39%), Gaps = 71/478 (14%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           S++I++L L      +P      F  AG   G K +    N L+  +V++   +  E + 
Sbjct: 133 SLVIEVLRLI----ERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELL 188

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++++    E+  +  N ++   C++G  + A + +  +K     P   TYN LI  + K 
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +     A  V ++M    +  +  T        CK      A+ + E   +       
Sbjct: 249 DCLDS---ASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLME---TENFVPDT 302

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y  LI+GLC     +EA+   + M A+   PNVVT + L+ G   KK + + + + + 
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------ 408
           +  +G  PS   +N+L+ AYC  G    A+ +   M+  G  P    YN LI        
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422

Query: 409 -----------------------------------LSREGNVEGVRNIMNELVNNGMRAG 433
                                              L   G  E   +++ E++  G    
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
             TY+ ++G LC   K + A  L +E   M++     ++ TY +++  FC+ G +E A  
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEE---MKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 494 LLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
             NE+ E G  PN  TY                  + E M+ +G +P+I  +   I G
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 38/307 (12%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I+ D L+    K  K     E      ++G  +++ + + L+    K  + +    V 
Sbjct: 674 NQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 733

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+  +  +++GLCK GK ++A  +M+ M+  G  P VVTY  +IDG+   
Sbjct: 734 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF--- 790

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------- 285
           G IGK+     + + M   G+ PN VT+  LID  CK+  +  A  + EEM         
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850

Query: 286 ------------------------GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM- 320
                                   G    A  +  Y  L++ L    +L+ A+ L +E+ 
Sbjct: 851 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVA 910

Query: 321 -MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
             ++ L     T N+LI   C    V+KA  LF ++S++G+ P + T+ +LI    +  +
Sbjct: 911 TFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSK 970

Query: 380 MEDAFAM 386
           + +A  +
Sbjct: 971 ISEALLL 977



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 36/266 (13%)

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
           Y K  +  L  +   +  +     +V+   +++  L K GK ++   + + M+ +  + N
Sbjct: 720 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 779

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
           + ++  +++G  + GK+    +++E M S GV+P  VTY +LID  CK G +        
Sbjct: 780 VVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 839

Query: 238 ------------GKMYKADAVFKDMVENGILPNEV----------TFNTLIDGFCKDENI 275
                       G     +   K+ +E+  L +E+           +  L+D   K + +
Sbjct: 840 EMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRL 899

Query: 276 SAAMKVFEEMGSHGIAAGVV----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             A+++ EE+ +   +A +V    TYNSLI  LC+  K+D+A  L  EM   G+ P + T
Sbjct: 900 EMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQT 957

Query: 332 SNALINGFCKKKLVEKARVLFDDISE 357
             +LI G  +   + +A +L D IS 
Sbjct: 958 FCSLIKGLFRNSKISEALLLLDFISH 983


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 201/354 (56%), Gaps = 4/354 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + SV +C  ++  L K G  ++ + +++EMK + +  N+ S++ +++G C AGKL ++  
Sbjct: 60  RISVATC-IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR 118

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +  +M   GV P +V +N+LID  CK+G   K+ +A  + +  ++ GI+ + VT+N+LID
Sbjct: 119 LFNEMVDQGVQPNLVQFNVLIDILCKEG---KVIEAKKLLEVTIQRGIILDLVTYNSLID 175

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFCK  ++S+A K+F  M S G     ++Y  LING C   K++EA+ L +EM   G +P
Sbjct: 176 GFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRP 235

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NV T + L+ G  +   V  A  LF  +   G+S     Y   +D  CK G + +A  + 
Sbjct: 236 NVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELF 295

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           N +       D  +Y+ LI GL + G VE       +L   G++  +VT NI++   C+ 
Sbjct: 296 NELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRV 355

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +  KA  L ++M KME+    P+I+TYN L++GFC+  KLE+   LL+++ ++
Sbjct: 356 EQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 189/379 (49%), Gaps = 44/379 (11%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------- 237
           +L + N + N LC   ++++    M  +   G  P +VTYN LI G C+   I       
Sbjct: 9   DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCII 68

Query: 238 -------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
                  G   +A  +F++M   G++PN +++++L+ GFC    +  + ++F EM   G+
Sbjct: 69  IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGV 128

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +V +N LI+ LC +GK+ EA  L +  +  G+  ++VT N+LI+GFCK   +  AR 
Sbjct: 129 QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARK 188

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF  +  +G   + I+Y  LI+ YCK  ++E+A  + N M   G  P+V TY+ L+ GL 
Sbjct: 189 LFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 248

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----FKMEKE 466
           + G V     +   +  +G+      Y I +  LCK+G   +A+ L +E+    FK++ E
Sbjct: 249 QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFE 308

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------- 513
                  +Y+ LI G C+ GK+E A     +L ++GL PN  T  I+             
Sbjct: 309 -------SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 361

Query: 514 ------REEMMEKGFIPDI 526
                  E+M E G  PDI
Sbjct: 362 NILFEKMEKMEENGCTPDI 380



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 173/329 (52%), Gaps = 6/329 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+     G+  +V+S + L+      GK E+ + ++ EM  + ++ NL  FN +++ L
Sbjct: 83  EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 142

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK GK+ +A  ++E     G+   +VTYN LIDG+CK   IG +  A  +F  M   G  
Sbjct: 143 CKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCK---IGDLSSARKLFLSMPSKGCE 199

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            NE+++  LI+G+CK   +  AM ++ EM   G    V TY++L+ GL   GK+ +A  L
Sbjct: 200 HNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKL 259

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
              M ASG+  +       ++G CK  ++ +A  LF+++          +Y+ LID  CK
Sbjct: 260 FGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCK 319

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI---MNELVNNGMRAG 433
            G++E A+     +   G+ P+V T N +I G  R   V+    +   M ++  NG    
Sbjct: 320 AGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPD 379

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           ++TYN L+   C+  K ++ V+LL +MFK
Sbjct: 380 IITYNTLLRGFCESNKLEEVVNLLHKMFK 408



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 170/312 (54%), Gaps = 24/312 (7%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G+SP + T NIL +  C    + ++ +  A    ++  G +P+ VT+NTLI G C+
Sbjct: 1   MHLAGLSPDLFTLNILANCLCN---LNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCR 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              IS A  +                  +I+GLC  G  DEA  + +EM A G+ PNV++
Sbjct: 58  VHRISVATCI------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVIS 99

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            ++L++GFC    +E+++ LF+++ +QG+ P+++ +N LID  CKEG++ +A  +    +
Sbjct: 100 YSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTI 159

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            RG++ D+ TYN LI G  + G++   R +   + + G     ++Y IL+   CK  K +
Sbjct: 160 QRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVE 219

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A++L +EM ++ K    PN+ TY+ L+ G  Q GK+ DAN L   +   G+  +   Y 
Sbjct: 220 EAMNLYNEMPQVGKR---PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYV 276

Query: 512 IVREEMMEKGFI 523
           I  + + + G +
Sbjct: 277 IFLDGLCKNGVL 288



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 21/272 (7%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+  T N L +  C    +S  +     +   G    +VTYN+LI GLC   ++  A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             +                  +I+G CK    ++A+ +F+++  QG+ P+VI+Y++L+  
Sbjct: 65  TCI------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           +C  G++E++  + N M+D+GV P++  +N LI  L +EG V   + ++   +  G+   
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           LVTYN L+   CK G    A  L      M  +    N ++Y +LI G+C+  K+E+A  
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLF---LSMPSKGCEHNEISYTILINGYCKIWKVEEAMN 223

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           L NE+ + G  PN  TY  +   +++ G + D
Sbjct: 224 LYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGD 255



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 8/240 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  F K G  +S   +F  LS  S     N I   +L+  Y K  K       +    
Sbjct: 172 SLIDGFCKIGDLSSARKLF--LSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP 229

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G + +V + + LL  L++ GK  D   ++  MK   I ++   +   L+GLCK G L 
Sbjct: 230 QVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A ++  ++KS        +Y+ LIDG CK    GK+  A   FK + + G+ PN VT N
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKA---GKVEIAWEFFKQLSQEGLQPNVVTCN 346

Query: 264 TLIDGFCKDENISAAMKVF---EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            +I GFC+ E +  A  +F   E+M  +G    ++TYN+L+ G C   KL+E V L  +M
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V + N ++    K  + E    V   MK R    ++ ++N ++  LC   KL  A  
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +++ +      P V+TY ILI+    +GGI +  K   + ++M+  G+LP+  T+N +I 
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK---LLEEMLARGLLPDMYTYNAIIR 250

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A ++   + S G    V++YN L+      GK DE   L  EM + G +P
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT + LI+  C+   +++A  +   + E+ L+P   +Y+ LI A CKEGR++ A  + 
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL---------------------- 425
           + M+  G LPD+  YN ++A L + GN      I N+L                      
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430

Query: 426 -------------VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                        ++ G+    +TYN L+  LC+DG  ++A+ LLD+   ME+    P +
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDD---MEQSGFRPTV 487

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           ++YN+++ G C+  +++DA G+  E++EKG  PN+TTY ++ E
Sbjct: 488 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 194/355 (54%), Gaps = 6/355 (1%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   L+ A + EG   +   + +EM  R +  ++ ++N ++ G+CK G + +A++++
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 265

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             + S G  P V++YNIL+  +  +G   K  + + +  +M   G  PN+VT++ LI   
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQG---KWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   I  A+ V + M    +     +Y+ LI+ LC +G+LD A+ + D M+++G  P++
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V  N ++   CK     +A  +F+ +   G  P+V +YNT+I A    G    A  M  +
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M+ +GV PD  TYN LI+ L R+G VE    +++++  +G R  +++YNI++  LCK  +
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              A+ +  EM  +EK  + PN  TY +LI+G    G   +A  L N L  + +I
Sbjct: 503 IDDAIGMFAEM--IEKGCR-PNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 54/441 (12%)

Query: 132 PHLGFEAFKRAG---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           P +G  A  R      Y  + + L   +LL    K GKF +  Y  + +  +    ++  
Sbjct: 48  PKVGVSAEARPAHLQSYDFRETHLM--KLLNRSCKAGKFNESLYFLECLVNKGYTPDVIL 105

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
              ++ G      + KAS +ME ++S    P V  YN +I G+CK   + ++  A  V  
Sbjct: 106 CTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISGFCK---VNRIEAATQVLN 161

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M   G LP+ VT+N +I   C    +  A+KV +++        V+TY  LI    V+G
Sbjct: 162 RMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEG 221

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            ++EA+ L +EM+A GL P++ T NA+I G CK+ +VE+A  L   ++ +G  P VI+YN
Sbjct: 222 GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYN 281

Query: 369 TLIDAY-----------------------------------CKEGRMEDAFAMRNSMLDR 393
            L+ A+                                   C+ GR+++A ++   M+++
Sbjct: 282 ILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            + PD  +Y+ LI+ L +EG ++    IM+ +++NG    +V YN ++ ALCK+G + +A
Sbjct: 342 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 401

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-- 511
           + + +++  M      PN+ +YN +I      G    A G++  ++ KG+ P++ TY   
Sbjct: 402 LEIFNKLRGMGCP---PNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458

Query: 512 ---IVREEMMEK--GFIPDIE 527
              + R+ ++E+  G + D+E
Sbjct: 459 ISCLCRDGLVEEAIGLLDDME 479



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 157/268 (58%), Gaps = 3/268 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K  V+S N LLRA + +GK+++ E +  EM  R  E N  +++ +++ LC+ G++++A
Sbjct: 272 GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +++ M    ++P   +Y+ LI   CK+G   ++  A  +   M+ NG LP+ V +NT+
Sbjct: 332 ISVLKVMIEKELTPDTYSYDPLISALCKEG---RLDLAIGIMDYMISNGCLPDIVNYNTI 388

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +   CK+ N + A+++F ++   G    V +YN++I+ L   G    A+ +   M++ G+
Sbjct: 389 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ +T N+LI+  C+  LVE+A  L DD+ + G  P+VI+YN ++   CK  R++DA  
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           M   M+++G  P+ +TY  LI G+   G
Sbjct: 509 MFAEMIEKGCRPNETTYILLIEGIGFAG 536



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   + + N ++R + KEG  E    +   +  +  + ++ S+N +L      GK ++ 
Sbjct: 237 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M S G  P  VTY+ILI   C+    G++ +A +V K M+E  + P+  +++ L
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCR---FGRIDEAISVLKVMIEKELTPDTYSYDPL 353

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   CK+  +  A+ + + M S+G    +V YN+++  LC +G  ++A+ + +++   G 
Sbjct: 354 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 413

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV + N +I+         +A  +   +  +G+ P  ITYN+LI   C++G +E+A  
Sbjct: 414 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIG 473

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M   G  P V +YN ++ GL +   ++    +  E++  G R    TY +L+  + 
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 533

Query: 446 KDGKSKKAVSLLDEMF 461
             G   +A+ L + +F
Sbjct: 534 FAGWRTEAMELANSLF 549


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 202/363 (55%), Gaps = 9/363 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS--FNFVLNGLCKAGKLN 203
           G   ++++   L++    E   E+ E V +E+++ + +L +D   F  V+NG C+ G++ 
Sbjct: 308 GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK-QLVVDEAVFGAVINGYCQMGRME 366

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A+ ++ +M    +   +  YNI+I+GYCK   +G+M +A  +  +M   G+ P+  ++N
Sbjct: 367 DAARLLNEMVDSRLQVNLFVYNIMINGYCK---LGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +L+DG+CK   ++ A + +  M  +G AA  +TYN+L+ G C  G +D+A+ L   M+  
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G+ PN ++ + L++GF K    EKA  L+ +   +GL+ +  T+NT+I+  CK  RM +A
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M      PD+ TY  L +G  + G+++    I+NEL N G    +  +N L+  
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
                 +K+   + D +F+M      PN V Y  LI G+C++G L  A  L  E++EKGL
Sbjct: 604 ---HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 504 IPN 506
           +PN
Sbjct: 661 VPN 663



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 50/484 (10%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           SLL   +LLH LV A++    R+ L   +          +F  L         ++   D+
Sbjct: 121 SLLAHAQLLHILVRARRSADARAILASLLSARP--PAPPLFPHLVEVYKEFSFSAASFDL 178

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR- 180
           L+ A     +     + F      G + S+ SCN +L  L + G       V+++M+R  
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238

Query: 181 ----------------------------------RIELNLDSFNFVLNGLCKAGKLNKAS 206
                                              +E+NL +++ V+NG C+ G+ N A 
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR 298

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTL 265
            +++ +   G SP +VTY +L+ GYC +     M +A+ V +++ +N  ++ +E  F  +
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNE---KNMEEAEGVVQEIRKNKQLVVDEAVFGAV 355

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+C+   +  A ++  EM    +   +  YN +ING C  G++ EA  +  EM   G+
Sbjct: 356 INGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGV 415

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+  + N+L++G+CKK L+ KA   ++ +   G + + +TYN L+  +C  G ++DA  
Sbjct: 416 RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALR 475

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML +G+ P+  + + L+ G  + G  E   N+  E +  G+     T+N ++  LC
Sbjct: 476 LWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           K  +  +A  L+D+M      K+W   P+I+TY  L  G+C+ G ++ A+ +LNEL   G
Sbjct: 536 KIERMPEAEELVDKM------KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 503 LIPN 506
             P 
Sbjct: 590 FAPT 593



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 201/404 (49%), Gaps = 32/404 (7%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  + +SC+ LL    K GK E    ++KE   R +  N  +FN V+NGLCK  ++ +A
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++ MK     P ++TY  L  GYCK   IG M +A  +  ++   G  P    FN+L
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCK---IGDMDRASRILNELENLGFAPTIEFFNSL 600

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G    +       +  EM + G++   V Y +LI G C +G L  A  L  EM+  GL
Sbjct: 601 ITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV--------------------- 364
            PN+   ++L++ F +K   ++A ++  ++    + P +                     
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 365 -----ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
                I +N +I   CK GR+EDA  +   + D+G + D  TY+ LI G S  G V+   
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           ++ + +++ G+   +VTYN L+  LCK G+  +AVSL     K+  +   PN +TYN LI
Sbjct: 781 DLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFK---KLWTKGISPNAITYNTLI 837

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
              C+ G + +A  L   ++E+G+ P   TY I+   +  +G++
Sbjct: 838 DKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYM 881



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 215/442 (48%), Gaps = 39/442 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N I    L+  + K+ K       +K     GL  +  + N ++  L K  +  + E + 
Sbjct: 488 NEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELV 547

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +MK+ R   ++ ++  + +G CK G +++AS I+ ++++LG +P +  +N LI G+   
Sbjct: 548 DKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHF-- 605

Query: 235 GGIGKMY-KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             I K + K + +  +M   G+ PN V +  LI G+CK+ ++  A  ++ EM   G+   
Sbjct: 606 --IAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV------------------------ 329
           +   +SL++     GK DEA  +   ++ + + P++                        
Sbjct: 664 LFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHS 723

Query: 330 --VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
             +  N +I G CK   +E A+ L  D+ ++G      TY++LI      G ++ AF +R
Sbjct: 724 AKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLR 783

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           ++ML  G+ P++ TYN LI GL + G +    ++  +L   G+    +TYN L+   CKD
Sbjct: 784 DTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKD 843

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G   +A  L   M    +E   P + TY++LI G C +G +E+A  LL++++E  + PN 
Sbjct: 844 GYITEAFKLKQRMI---EEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNY 900

Query: 508 TTYQI-----VREEMMEKGFIP 524
            TY       VR E ++   +P
Sbjct: 901 VTYWTLIQGYVRCESVDVPIMP 922



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 12/356 (3%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F  +  VYKE        +  SF+ +L  L  AG+L+ A  + ++M++LG    + + N 
Sbjct: 159 FPHLVEVYKEF-----SFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNS 213

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +++   + G +G      AVF+ M   G LP++ T   +   +CK + +  A++  EEM 
Sbjct: 214 ILNRLAQTGDLGATV---AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMT 270

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
             G+   +V Y++++NG C  G+ ++A  + D +   G  PN+VT   L+ G+C +K +E
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330

Query: 347 KARVLFDDISE-QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           +A  +  +I + + L      +  +I+ YC+ GRMEDA  + N M+D  +  ++  YN +
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           I G  + G +    NI++E+   G+R    +YN LV   CK G   KA    + M +   
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                  +TYN L+KGFC  G ++DA  L   +L+KG+ PN+ +   + +   + G
Sbjct: 451 AA---TTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSG 503



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 194/397 (48%), Gaps = 13/397 (3%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           PHL  E +K         S  S + LLRAL   G+ +    V+ EM+     L++ S N 
Sbjct: 160 PHL-VEVYKE-----FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNS 213

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +LN L + G L     + E M+  G  P   T  I+   YCK  G+     A    ++M 
Sbjct: 214 ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGV---VHALEFVEEMT 270

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G+  N V ++ +++G+C+    + A ++ + +   G +  +VTY  L+ G C +  ++
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330

Query: 312 EAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           EA  +  E+  +  L  +     A+ING+C+   +E A  L +++ +  L  ++  YN +
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ YCK GRM +A  + + M   GV PD  +YN L+ G  ++G +       N ++ NG 
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            A  +TYN L+   C  G    A+ L    F M K+   PN ++ + L+ GF + GK E 
Sbjct: 451 AATTLTYNALLKGFCSLGSIDDALRL---WFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L  E L +GL  N TT+  V   + +   +P+ E
Sbjct: 508 ALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 223/466 (47%), Gaps = 40/466 (8%)

Query: 89  FVKNGKFTSVSTIFHALSTC---SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           + K G+      I H ++      D+   NS++       Y K    +  FE +      
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVD-----GYCKKGLMNKAFETYNTMLRN 448

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G  ++ L+ N LL+     G  +D   ++  M ++ I  N  S + +L+G  K+GK  KA
Sbjct: 449 GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKA 508

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ ++  + G++    T+N +I+G CK   I +M +A+ +   M +    P+ +T+ TL
Sbjct: 509 LNLWKETLARGLAKNTTTFNTVINGLCK---IERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
             G+CK  ++  A ++  E+ + G A  +  +NSLI G  +  +  +   +  EM   GL
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN V   ALI G+CK+  +  A  L+ ++ E+GL P++   ++L+  + ++G+ ++A  
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 386 MRNSMLDRGVLPDVST--------------------------YNCLIAGLSREGNVEGVR 419
           +  +++   ++PD+S                           +N +I GL + G +E  +
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           N++ +L + G  A   TY+ L+      G    A  L D M  +      PNIVTYN LI
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT---PNIVTYNSLI 802

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            G C+ G+L  A  L  +L  KG+ PN  TY  + ++  + G+I +
Sbjct: 803 YGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 152/305 (49%), Gaps = 12/305 (3%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N++    L+  + K    H  +  +    + GL  ++  C+ L+    ++GKF++  
Sbjct: 625 LSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEAN 684

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V +         NL   + + +      ++ K ++ ++ +         + +NI+I G 
Sbjct: 685 LVLQ---------NLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGL 735

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK   +G++  A  +  D+ + G + +  T+++LI G      +  A  + + M S G+ 
Sbjct: 736 CK---LGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT 792

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTYNSLI GLC  G+L  AV+L  ++   G+ PN +T N LI+  CK   + +A  L
Sbjct: 793 PNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL 852

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E+G+ P+V TY+ LI+  C +G ME+A  + + M++  V P+  TY  LI G  R
Sbjct: 853 KQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912

Query: 412 EGNVE 416
             +V+
Sbjct: 913 CESVD 917



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  ++++ N L+  L K G+      ++K++  + I  N  ++N +++  CK G + +A
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   G+ P V TY+ILI+G C +G    M +A  +   M+EN + PN VT+ TL
Sbjct: 850 FKLKQRMIEEGIHPTVFTYSILINGLCTQG---YMEEAIKLLDQMIENNVDPNYVTYWTL 906

Query: 266 IDGFCKDENISAAMKVFEE 284
           I G+ + E++   +   ++
Sbjct: 907 IQGYVRCESVDVPIMPLDQ 925



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 5/168 (2%)

Query: 348 ARVLFDDISE--QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           A  LF  + E  +  S S  +++ L+ A    G+++ A  + + M   G    + + N +
Sbjct: 155 APPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSI 214

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           +  L++ G++     +  ++   G      T  I+  A CK      A+  ++EM KM  
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           E    N+V Y+ ++ G+C+ G+  DA  +L+ L  +G  PN  TY ++
Sbjct: 275 EV---NLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLL 319



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 57/125 (45%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  L  N +  + L+    K+ +       FK+    G+  + ++ N L+    K+G   
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           +   + + M    I   + +++ ++NGLC  G + +A  +++ M    V P  VTY  LI
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907

Query: 229 DGYCK 233
            GY +
Sbjct: 908 QGYVR 912


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 223/448 (49%), Gaps = 78/448 (17%)

Query: 155 NQLLRALVKEGKF----EDVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           N ++ A++ +G F    +DV   + KEMK RR+E +   F+ +LN L + G++++A  ++
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKG-----------------------------GIGKM 240
            DM S G+ P +V Y  LIDGY K+G                             G+ ++
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649

Query: 241 YKADA--VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
            K D   V   M+E G+ P+ +T+NT+I+ +C       A+ +  EM S+GI    VTYN
Sbjct: 650 GKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 299 SLINGLCVDGKLDEAVALRDEMM-----------------------------------AS 323
            LI GLC  G +++A +  DEM+                                   AS
Sbjct: 710 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 769

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           GL+ ++   N LI  FC+  +  KA+V+ D++ ++G+S  ++TYN LI  YC    +E A
Sbjct: 770 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 829

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV----TYNI 439
               + M   G+ P+++TYN L+ GLS  G +E +     +LV+     GLV    TY+I
Sbjct: 830 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 889

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV    + G  KK + L  EM     +   P + TYNVLI  + + GK+ +A  LLN+LL
Sbjct: 890 LVSGYGRVGNRKKTIILHIEMIT---KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLL 946

Query: 500 EKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            KG IPN  TY I+    +   + P+I+
Sbjct: 947 TKGRIPNSFTYDILTCGWLNLSYEPEID 974



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 222/484 (45%), Gaps = 89/484 (18%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      L  + ++ + LL    K GK E  E V ++M++  +  N+ +F+ ++NG 
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K G L+KA D++ +M    V P  + Y ILIDGY K G                     
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 566

Query: 236 -----------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                       +G+M +A ++  DM   GI P+ V + +LIDG+ K+ N  AA+ + +E
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 285 MGSH----------------------------------GIAAGVVTYNSLINGLCVDGKL 310
           M                                     G+A   +TYN++IN  C+ GK 
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKT 686

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           ++A+ + +EM + G+ PN VT N LI G CK   VEKA    D++      P+ IT+  L
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFL 746

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           + AY +  + +    +   ++  G+   ++ YN LI    R G     + +++E+V  G+
Sbjct: 747 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 806

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG---- 486
            A LVTYN L+   C     +KA+    +MF    +   PNI TYN L+ G    G    
Sbjct: 807 SADLVTYNALIRGYCTGSHVEKALKTYSQMFV---DGIAPNITTYNTLLGGLSNAGLMEE 863

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHM 530
            +E+   L++E+ E+GL+PN  TY I+                  EM+ KGF+P ++ + 
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 923

Query: 531 YNIS 534
             IS
Sbjct: 924 VLIS 927



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 234/482 (48%), Gaps = 59/482 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTC---SDSLCRNSIIID--------------MLMLAY 126
           + L  F K G  T   ++F+ +       D L  N ++                 L+ AY
Sbjct: 272 TLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAY 331

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K +        +K+    G+   V++C+ +L    + GK  +   +++EM    ++ N 
Sbjct: 332 CKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNH 391

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            S+  ++N L K+G++ +A ++   M   G+S  +VT   ++DG  K   +GK  +A+ V
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK---VGKTKEAEEV 448

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+ +++  + PN VT++ L+DG+CK   +  A  V ++M    +   V+T++S+ING   
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAK 508

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALING------------FCKK---KLVEKARVL 351
            G L +AV +  EM+   + PN +    LI+G            FCK+   + +E++ V+
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568

Query: 352 FD--------------------DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
           FD                    D+  +G+ P ++ Y +LID Y KEG    A ++   M 
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++ +  DV  YN LI GL R G  +  R + + ++  G+    +TYN ++   C  GK++
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNTIINTYCIKGKTE 687

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A+ +L+E   M+     PN VTYN+LI G C+ G +E A   L+E+L    +P   T++
Sbjct: 688 DALDILNE---MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHK 744

Query: 512 IV 513
            +
Sbjct: 745 FL 746



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           ++  V++ N L++ L++ GK+ D  YV   M    +  +  ++N ++N  C  GK   A 
Sbjct: 632 IRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           DI+ +MKS G+ P  VTYNILI G CK G + K   A++   +M+    +P  +T   L+
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEK---AESALDEMLVMEFVPTPITHKFLV 747

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
             + + E     +++ E++ + G+   +  YN+LI   C  G   +A  + DEM+  G+ 
Sbjct: 748 KAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGIS 807

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG----RMED 382
            ++VT NALI G+C    VEKA   +  +   G++P++ TYNTL+      G     ME+
Sbjct: 808 ADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEE 867

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              + + M +RG++P+ +TY+ L++G  R GN +    +  E++  G    L TYN+L+ 
Sbjct: 868 TEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLIS 927

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
              K GK  +A  LL+++     + + PN  TY++L  G+
Sbjct: 928 DYAKSGKMIEARELLNDLL---TKGRIPNSFTYDILTCGW 964



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 214/429 (49%), Gaps = 25/429 (5%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC +SI  ++L+  Y +               D G+   V+  N L+    + G      
Sbjct: 193 LCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQAT 252

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA-------------------SDIMEDM 212
            + +   R  +++++ ++N +L   CK G L +A                   +D++   
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +   + P +VTY  LI  YCK  G+ +   + +++K M+ NGI+P+ VT ++++ GFC+ 
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEE---SHSLYKKMIMNGIMPDVVTCSSILYGFCRH 369

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             ++ A  +F EM   G+    V+Y ++IN L   G++ EA  L+ +M+  G+  ++VT 
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             +++G  K    ++A  +F+ I +  L+P+ +TY+ L+D YCK G+ME A  +   M  
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             V P+V T++ +I G +++G +    +++ E+V   +    + Y IL+    K G+   
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A     EM     E+   N++ +++L+    + G++++A  L+ ++  KG+ P+   Y  
Sbjct: 550 ADDFCKEMKSRRLEES--NVI-FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 513 VREEMMEKG 521
           + +   ++G
Sbjct: 607 LIDGYFKEG 615



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 206/437 (47%), Gaps = 56/437 (12%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F      GL  ++   N LL      G    V+ +Y +M    +  ++ S N +++ LC
Sbjct: 81  TFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLC 140

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           K G L+ A   + +   + +    VTYN +I G+C+KG + + +    +  +MV+ G+  
Sbjct: 141 KVGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGF---GLLSEMVKRGLCF 195

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +T N L+ G+C+   +  A  V   +   G+   V+  N+LI+G C  G + +A  L 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI-------------------SEQ 358
           +    S +K ++VT N L+  FCK   + +A  LF++I                     +
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            L P+++TY TLI AYCK   +E++ ++   M+  G++PDV T + ++ G  R G +   
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL-------------------LDE 459
             +  E+   G+    V+Y  ++ +L K G+  +A +L                   +D 
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 460 MFKMEKEKK-------------WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +FK+ K K+              PN VTY+ L+ G+C+ GK+E A  +L ++ ++ + PN
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495

Query: 507 QTTYQIVREEMMEKGFI 523
             T+  +     +KG +
Sbjct: 496 VITFSSIINGYAKKGML 512



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 167/340 (49%), Gaps = 27/340 (7%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           + + AS     M++LG+ P +  +N L+  +   G + ++     ++ DM+  G++P+  
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQV---KLMYSDMLFCGVVPDVF 130

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           + N L+   CK  ++  A+       +  +    VTYN++I G C  G +D+   L  EM
Sbjct: 131 SVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEM 188

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  GL  + +T N L+ G+C+  LV+ A  +  ++ + G++  VI  NTLID YC+ G M
Sbjct: 189 VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLM 248

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV----------NN-- 428
             A  +  +     V  D+ TYN L+    + G++    ++ NE++          NN  
Sbjct: 249 SQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDV 308

Query: 429 -------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
                   ++  LVTY  L+ A CK    +++ SL     KM      P++VT + ++ G
Sbjct: 309 VTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYK---KMIMNGIMPDVVTCSSILYG 365

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           FC+ GKL +A  L  E+ E GL PN  +Y  +   + + G
Sbjct: 366 FCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG 405



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 45/318 (14%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + GL    ++ N ++     +GK ED   +  EMK   I  N  ++N ++ GLCK G
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719

Query: 201 KLNKASDIMEDMKSLGVSPKVVT-----------------------------------YN 225
            + KA   +++M  +   P  +T                                   YN
Sbjct: 720 AVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYN 779

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LI  +C+   +G   KA  V  +MV+ GI  + VT+N LI G+C   ++  A+K + +M
Sbjct: 780 TLITVFCR---LGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 836

Query: 286 GSHGIAAGVVTYNSLINGLCVDG----KLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
              GIA  + TYN+L+ GL   G     ++E   L  EM   GL PN  T + L++G+ +
Sbjct: 837 FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGR 896

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
               +K  +L  ++  +G  P++ TYN LI  Y K G+M +A  + N +L +G +P+  T
Sbjct: 897 VGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFT 956

Query: 402 YNCLIAG---LSREGNVE 416
           Y+ L  G   LS E  ++
Sbjct: 957 YDILTCGWLNLSYEPEID 974



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 5/238 (2%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F TLI  +   +  S A   F  M + G+   +  +N+L+      G + +   +  +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+ P+V + N L++  CK   ++ A     +     +    +TYNT+I  +C++G ++
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
             F + + M+ RG+  D  T N L+ G  R G V+    +M  LV+ G+   ++  N L+
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
              C+ G   +A  L++  ++ + +    +IVTYN L+K FC+ G L  A  L NE+L
Sbjct: 240 DGYCEAGLMSQATELIENSWRSDVK---IDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 5/167 (2%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI  Y    R   A A  + M   G++P +  +N L+   +  G V  V+ + ++++
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   + + N+LV +LCK G    A+  L     ++ +      VTYN +I GFCQKG
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDN-----VTYNTVIWGFCQKG 176

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            ++   GLL+E++++GL  +  T  I+ +     G +   E  MYN+
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 210/402 (52%), Gaps = 6/402 (1%)

Query: 111 SLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           S CR N +I   L+  +++N +        K   + G+   +   N L+  L K  + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
                 EM    ++ N  ++   ++G  +A +   A   +++M+  GV P  V    LI+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            YCKK    K+ +A + ++ MV+ GIL +  T+  L++G  K++ +  A ++F EM   G
Sbjct: 566 EYCKKE---KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           IA  V +Y  LING    G + +A ++ DEM+  GL PNV+  N L+ GFC+   +EKA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L D++S +GL P+ +TY T+ID YCK G + +AF + + M  +G++PD   Y  L+ G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK-K 468
            R  +VE    I       G  +    +N L+  + K GK++    +L+ +     ++  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN VTYN++I   C++G LE A  L +++    L+P   TY
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 192/379 (50%), Gaps = 22/379 (5%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KEG  E  + ++  M    +     ++  ++ G C+   + +  +++ +MK   +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  ++ G C  G +   Y    + K+M+ +G  PN V + TLI  F ++     AM+V 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYN---IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   GIA  +  YNSLI GL    ++DEA +   EM+ +GLKPN  T  A I+G+ + 
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                A     ++ E G+ P+ +    LI+ YCK+ ++ +A +   SM+D+G+L D  TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTY 595

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ GL +   V+    I  E+   G+   + +Y +L+    K G  +KA S+ DEM  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV- 654

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
             +E   PN++ YN+L+ GFC+ G++E A  LL+E+  KGL PN  TY  +         
Sbjct: 655 --EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 514 -------REEMMEKGFIPD 525
                   +EM  KG +PD
Sbjct: 713 LAEAFRLFDEMKLKGLVPD 731



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 227/495 (45%), Gaps = 61/495 (12%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           KE   +  +     L+  L  AK+  + RSFL   V+NG                  L  
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG------------------LKP 520

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+      +  Y++  +     +  K   + G+  + + C  L+    K+ K  +    Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAY 580

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + M  + I  +  ++  ++NGL K  K++ A +I  +M+  G++P V +Y +LI+G+ K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK- 639

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G M KA ++F +MVE G+ PN + +N L+ GFC+   I  A ++ +EM   G+    
Sbjct: 640 --LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF-- 352
           VTY ++I+G C  G L EA  L DEM   GL P+      L++G C+   VE+A  +F  
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 353 ------------------------------------DDISEQGLSPSVITYNTLIDAYCK 376
                                               D   ++   P+ +TYN +ID  CK
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG +E A  + + M +  ++P V TY  L+ G  + G    +  + +E +  G+    + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP--NIVTYNVLIKGFCQKGKLEDANGL 494
           Y++++ A  K+G + KA+ L+D+MF           +I T   L+ GF + G++E A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 495 LNELLEKGLIPNQTT 509
           +  ++    IP+  T
Sbjct: 938 MENMVRLQYIPDSAT 952



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 227/511 (44%), Gaps = 33/511 (6%)

Query: 11  DITELIRNHHW------SKLKNTDPNTVILQLFNSDA--DPVLILRYFCWSTKELRASHS 62
           +I  +++  +W      S L       V+L +  S    DP  +L +F W   +      
Sbjct: 37  EIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQK 96

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS---III 119
           L     L   L     + K  S +   ++      V+ ++ ++  CS      S   ++ 
Sbjct: 97  LDSFSFLALDLCNFGSFEKALSVVERMIERN--WPVAEVWSSIVRCSQEFVGKSDDGVLF 154

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +L   Y+           F  +    L   +  C  LL AL++  + +    VYK M  
Sbjct: 155 GILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE 214

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R +  ++ +++ ++   C+AG +    D++          +  T  + +DG  K      
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVL-----FKTEKEFRTATLNVDGALK------ 263

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
                 + + M+  G++P + T++ LIDG CK + +  A  +  EM S G++    TY+ 
Sbjct: 264 ------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+GL      D A  L  EM++ G+       +  I    K+ ++EKA+ LFD +   G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L P    Y +LI+ YC+E  +   + +   M  R ++    TY  ++ G+   G+++G  
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           NI+ E++ +G R  +V Y  L+    ++ +   A+ +L E   M+++   P+I  YN LI
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE---MKEQGIAPDIFCYNSLI 494

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            G  +  ++++A   L E++E GL PN  TY
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L +G+  K  +E+A  +F       L P +     L+DA  +  R++  + +   M++R 
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V+ DV TY+ LI    R GNV+  ++++ +       A   T N+       DG  K   
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA---TLNV-------DGALKLKE 266

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           S++ +          P   TY+VLI G C+  +LEDA  LL E+   G+  +  TY ++ 
Sbjct: 267 SMICKGLV-------PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 515 EEMME-------KGFIPDIEGHMYNI 533
           + +++       KG + ++  H  NI
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINI 345



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           +F R G    K + ++ N ++  L KEG  E  + ++ +M+   +   + ++  +LNG  
Sbjct: 796 SFDRFG----KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVF-KDMVENGI 255
           K G+  +   + ++  + G+ P  + Y+++I+ + K+G   K +   D +F K+ V++G 
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +  T   L+ GF K   +  A KV E M          T   LIN  C+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 205/423 (48%), Gaps = 38/423 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLN 203
           +GL + V  C  L+ A  +     +   V+++M K      N  +++ +++GLC+AG+L 
Sbjct: 202 FGLDTHV--CTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 259

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M   G  P   TY +LI   C    IG   KA  +  +M     +PN  T+ 
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCD---IGMTDKAMKMLDEMATKACVPNVHTYT 316

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  C++  I  A  VF +M  HG+  G++T+N+LING C +G +  A  L   M   
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KPN+ T N L+ G C+     KA +L   + + GL P  +TYN L+D +CKEG++  A
Sbjct: 377 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 436

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + NSM   G+ PD  T+  LI GL + G +E    I+  +V  G+    VT+  L+  
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 496

Query: 444 LCKDGKSKKAVSLLDEMF--------------------------------KMEKEKKWPN 471
            CK GK+K    L + M                                 KM K    P+
Sbjct: 497 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           +VT+ +LI+G C+ G+   +  +L  + + G  PN  TY I+   +   G + + E  ++
Sbjct: 557 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 616

Query: 532 NIS 534
           ++S
Sbjct: 617 SMS 619



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L +EGK E+   V+++M +  +   + +FN ++NG CK G +  A  ++  M+   
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P + TYN L++G C+   + K YKA  + + +V+NG+LP+ VT+N L+DGFCK+  ++
Sbjct: 378 CKPNIRTYNELMEGLCR---VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 434

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F  M S G+     T+ +LI+GLC  G+L++A  +   M+  G+  + VT  ALI
Sbjct: 435 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 494

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK    +    LF+++ E     +  T+N  +DA  K+ ++ +A AM   M+  G++
Sbjct: 495 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 554

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V T+  LI G  R G       ++  +   G    + TY I++  LC +G+ ++A ++
Sbjct: 555 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L   F M      PN  TY VL+K   + G+L+ A  +++ +++ G  PN   Y
Sbjct: 615 L---FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 665



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 171/339 (50%), Gaps = 7/339 (2%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           VY+ M      L    +  V+N LCK G +  A      +  LG          L+   C
Sbjct: 158 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 217

Query: 233 KKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           ++  +G+ ++   VF+ M  E    PN VT++ LI G C+   +  A ++ +EM   G  
Sbjct: 218 RRDDLGEAFR---VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TY  LI   C  G  D+A+ + DEM      PNV T   LI+  C++  +E+A  +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + + GL P +IT+N LI+ YCKEG +  AF + + M      P++ TYN L+ GL R
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                    ++  +V+NG+    VTYNILV   CK+G+   A ++ + M     E   P+
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE---PD 451

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             T+  LI G C+ G+LE ANG+L  +++KG+  ++ T+
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 490



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 229/519 (44%), Gaps = 56/519 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           ++L  +      P + ++   +    + GK    + +F  +      LC   I  + L+ 
Sbjct: 298 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM--LKHGLCPGIITFNALIN 355

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K       F+          K ++ + N+L+  L +  K      + + +    +  
Sbjct: 356 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 415

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N +++G CK G+LN A +I   M S G+ P   T+  LIDG CK   +G++ +A+
Sbjct: 416 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK---LGRLEQAN 472

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   MV+ GI  +EVTF  LIDG CK         +FE M  +       T+N  ++ L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             D KL+EA A+  +MM  GL P+VVT   LI G C+      +  + + + + G SP+V
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  +I+  C  GR+E+A  +  SM   GV P+  TY  L+    + G ++    I++ 
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652

Query: 425 LVNNGMR----------AGLVTYNILVG--ALCKDGK----------------SKKAVSL 456
           +V NG +          +G V  N  +G  AL   G                 S     L
Sbjct: 653 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRL 712

Query: 457 L--DEMFKMEKEKKWPNIVT---YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +  D   K+  E K   + T   YN L+ G C++G++ +A+ L  ++++ GL P++    
Sbjct: 713 MDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISS 772

Query: 512 IVREE---------------MMEKGFIPDIEGHMYNISG 535
           I+                  +++  F+P    + + I G
Sbjct: 773 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG 811



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 47/345 (13%)

Query: 215 LGVSPKVVTYNILIDGYCK--KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            GV+ K V   +L+   C+  + G+ K+  A      M E G   +   ++TL+    K 
Sbjct: 96  FGVAQKAV---VLLIQECEDSENGVVKLMGA---LDGMTELGFRLSYPCYSTLLMCLAKL 149

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG------------------------ 308
                A  V+  M + G   G + Y +++N LC +G                        
Sbjct: 150 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 209

Query: 309 -----------KLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
                       L EA  + ++M      +PN VT + LI+G C+   +E+A  L  ++ 
Sbjct: 210 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 269

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G  PS  TY  LI A C  G  + A  M + M  +  +P+V TY  LI  L REG +E
Sbjct: 270 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 329

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +  +++ +G+  G++T+N L+   CK+G    A  LL     MEK    PNI TYN
Sbjct: 330 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS---VMEKGNCKPNIRTYN 386

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            L++G C+  K   A  LL  +++ GL+P++ TY I+ +   ++G
Sbjct: 387 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 431



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 145/286 (50%), Gaps = 7/286 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YGL  SV++   L+    + G+      + + MK+     N+ ++  ++NGLC  G++ +
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I+  M S GVSP   TY +L+  + K G + + ++   +   MV+NG  PN   ++ 
Sbjct: 611 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ---IVSTMVKNGCQPNSHIYSA 667

Query: 265 LIDGFC-KDENISA-AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           L+ GF   +  I A A+    ++ +  +++     N L + +     +D A+ +RDE+  
Sbjct: 668 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 727

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P     N L+ G CK+  + +A  L  D+ + GL P     +++I+ YCK  + ++
Sbjct: 728 CGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDN 785

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
                  +LD   +P  ++Y  +I GL  EG V+  + ++++LV +
Sbjct: 786 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 831


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   ++  L +    + V     
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L N +   G+ P+  TY +                + +EM++ G +P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVP 239

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 240 NGVTFTTLIDGHCKN 254


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 7/367 (1%)

Query: 155 NQLLRALVKEGKFEDVE-YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+ ++ + ++ + M     + ++ ++N +++GLCK G L+ A D++ +M 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G  P V+TY IL++G CK G    + +A  V  +M   G+  N V +N LI   C+ E
Sbjct: 418 RRGCEPNVITYAILVNGLCKAG---LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A+ +  EM + G    + TYNSLI GLC   ++DEA  L   M+  G   N VT N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+   ++   +KA  L +D+  +G +   ITYN LI A+CK G +E    +   M+  
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+  D  + N +I GL + G V+     + + +N G    +VTYN ++  LCK G+ K+A
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEA 654

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++L D   +++ E   P+  TYN  I   C++G + DA       +E G +P+  T+ ++
Sbjct: 655 LNLFD---RLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711

Query: 514 REEMMEK 520
              ++++
Sbjct: 712 VYTLLKQ 718



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 208/449 (46%), Gaps = 38/449 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NSI+   L+ A  +  +     +  +     G    V + N ++  L K  K  D   + 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM------------------------- 209
             M  R    +  ++ F+L+GLC+ GKLN+A  I+                         
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 210 -------EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
                  E M + G  P + TYNIL+ G CK+G +   +  D V  +M   G  PN +T+
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS--FARDLV-NEMSRRGCEPNVITY 428

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L++G CK   +  A  V  EM + G+    V YN LI  LC   K+  A+ L  EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G KP++ T N+LI G CK   +++A  LF ++   G   + +TYNTLI A  + G  + 
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N ML RG   D  TYN LI    + GN+E    +  +++ +G+ A  ++ NI++ 
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK GK   A   L +          P+IVTYN ++ G C+ G++++A  L + L  +G
Sbjct: 609 GLCKVGKVDNAFEFLRDAIN---RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           + P+  TY        ++G + D     Y
Sbjct: 666 VRPDAFTYNTFISWQCKEGMVNDACSFFY 694



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 201/392 (51%), Gaps = 11/392 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           D+++   V    P +    F      G+  +V +   +++AL    + +    + ++M +
Sbjct: 187 DLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTK 246

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                N   +  +++ L +  ++++A  ++E+M  +G  P V T+N +I G CK   + K
Sbjct: 247 HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK---VNK 303

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           ++ A  +   M+  G  P+ +T+  L+ G C+   ++ A K+  ++     A      N+
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA----ILNT 359

Query: 300 LINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           LING  + G+L EA +  +E M + G +P++ T N L++G CK+  +  AR L +++S +
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+VITY  L++  CK G +E+A  + + M  RG+  +   YNCLI  L R+  V   
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N+++E+   G +  L TYN L+  LCK  +  +A  L   M     +    N VTYN L
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML---LDGAVANNVTYNTL 536

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I    ++G  + A  L+N++L +G   ++ TY
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 200/432 (46%), Gaps = 46/432 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L+  +++   YP   ++   LH   + GK      I   +  C ++   N++I   +M 
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-CPNNAILNTLINGYVMS 367

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
             +K  +  L     +   ++G +  + + N L+  L KEG       +  EM RR  E 
Sbjct: 368 GQLKEAQSFLN----ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ ++  ++NGLCKAG L +A  ++ +M + G++   V YN LI   C+K    K++ A 
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE---KVHVAL 480

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL---- 300
            +  +M   G  P+  T+N+LI G CK + I  A ++F  M   G  A  VTYN+L    
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 301 -------------------------------INGLCVDGKLDEAVALRDEMMASGLKPNV 329
                                          I   C  G +++ + L ++M+  GL  + 
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           ++ N +ING CK   V+ A     D   +G  P ++TYN++++  CK GR+++A  + + 
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +   GV PD  TYN  I+   +EG V    +     + NG     +T+N+LV  L K   
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720

Query: 450 SKKAVSLLDEMF 461
            +    +LDE++
Sbjct: 721 QENNFFVLDELW 732



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 47/383 (12%)

Query: 165 GKFEDVEYVYKEMKR------------------------RRIELNLD------------S 188
           GKF+ ++ +  +MK                         + I L LD            S
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ VL  L        A+++  DM S GVSP V T+ I++   C      ++  A ++ +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCM---FNEVDSACSLLR 242

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           DM ++G +PN + + TLI    +   +S A+K+ EEM   G    V T+N +I+GLC   
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K+ +A  L D M+  G  P+ +T   L++G C+   + +AR +   I      P+    N
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILN 358

Query: 369 TLIDAYCKEGRMEDAFAMRN-SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           TLI+ Y   G++++A +  N +M++ G  PD+ TYN L+ GL +EG++   R+++NE+  
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    ++TY ILV  LCK G  ++A  +L E   M       N V YN LI   C+K K
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHE---MSARGLTINSVIYNCLICALCRKEK 475

Query: 488 LEDANGLLNELLEKGLIPNQTTY 510
           +  A  LL+E+  KG  P+  TY
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTY 498



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 20/235 (8%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
           +  R  H++LL G + +++          + +H  ++ G F        AL+  +D L R
Sbjct: 513 EAFRLFHNMLLDGAVANNVTY-------NTLIHALLRRGAFQK------ALTLVNDMLFR 559

Query: 115 ----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
               + I  + L+ A+ K      G E +++    GL +  +SCN ++  L K GK ++ 
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
               ++   R    ++ ++N VLNGLCK G++ +A ++ + ++  GV P   TYN  I  
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            CK+G +     A + F   +ENG +P+ +T+N L+    K  N      V +E+
Sbjct: 680 QCKEGMVN---DACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 205/423 (48%), Gaps = 38/423 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLN 203
           +GL + V  C  L+ A  +     +   V+++M K      N  +++ +++GLC+AG+L 
Sbjct: 225 FGLDTHV--CTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 282

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M   G  P   TY +LI   C    IG   KA  +  +M     +PN  T+ 
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCD---IGMTDKAMKMLDEMATKACVPNVHTYT 339

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  C++  I  A  VF +M  HG+  G++T+N+LING C +G +  A  L   M   
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KPN+ T N L+ G C+     KA +L   + + GL P  +TYN L+D +CKEG++  A
Sbjct: 400 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 459

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + NSM   G+ PD  T+  LI GL + G +E    I+  +V  G+    VT+  L+  
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 519

Query: 444 LCKDGKSKKAVSLLDEMF--------------------------------KMEKEKKWPN 471
            CK GK+K    L + M                                 KM K    P+
Sbjct: 520 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           +VT+ +LI+G C+ G+   +  +L  + + G  PN  TY I+   +   G + + E  ++
Sbjct: 580 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 639

Query: 532 NIS 534
           ++S
Sbjct: 640 SMS 642



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L +EGK E+   V+++M +  +   + +FN ++NG CK G +  A  ++  M+   
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P + TYN L++G C+   + K YKA  + + +V+NG+LP+ VT+N L+DGFCK+  ++
Sbjct: 401 CKPNIRTYNELMEGLCR---VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 457

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F  M S G+     T+ +LI+GLC  G+L++A  +   M+  G+  + VT  ALI
Sbjct: 458 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 517

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK    +    LF+++ E     +  T+N  +DA  K+ ++ +A AM   M+  G++
Sbjct: 518 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 577

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V T+  LI G  R G       ++  +   G    + TY I++  LC +G+ ++A ++
Sbjct: 578 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 637

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L   F M      PN  TY VL+K   + G+L+ A  +++ +++ G  PN   Y
Sbjct: 638 L---FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 688



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 171/339 (50%), Gaps = 7/339 (2%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           VY+ M      L    +  V+N LCK G +  A      +  LG          L+   C
Sbjct: 181 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 240

Query: 233 KKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           ++  +G+ ++   VF+ M  E    PN VT++ LI G C+   +  A ++ +EM   G  
Sbjct: 241 RRDDLGEAFR---VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TY  LI   C  G  D+A+ + DEM      PNV T   LI+  C++  +E+A  +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + + GL P +IT+N LI+ YCKEG +  AF + + M      P++ TYN L+ GL R
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                    ++  +V+NG+    VTYNILV   CK+G+   A ++ + M     E   P+
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE---PD 474

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             T+  LI G C+ G+LE ANG+L  +++KG+  ++ T+
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 513



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 228/503 (45%), Gaps = 40/503 (7%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           ++L  +      P + ++   +    + GK    + +F  +      LC   I  + L+ 
Sbjct: 321 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM--LKHGLCPGIITFNALIN 378

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K       F+          K ++ + N+L+  L +  K      + + +    +  
Sbjct: 379 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 438

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N +++G CK G+LN A +I   M S G+ P   T+  LIDG CK   +G++ +A+
Sbjct: 439 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK---LGRLEQAN 495

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   MV+ GI  +EVTF  LIDG CK         +FE M  +       T+N  ++ L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             D KL+EA A+  +MM  GL P+VVT   LI G C+      +  + + + + G SP+V
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  +I+  C  GR+E+A  +  SM   GV P+  TY  L+    + G ++    I++ 
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675

Query: 425 LVNNGMR----------AGLVTYNILVGALC----KDGKSKKAVSLLDEMFKMEKEKKWP 470
           +V NG +          +G V  N  +GA       D  ++   S  ++   +  E K  
Sbjct: 676 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKC 735

Query: 471 NIVT---YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE----------- 516
            + T   YN L+ G C++G++ +A+ L  ++++ GL P++    I+              
Sbjct: 736 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLE 795

Query: 517 ----MMEKGFIPDIEGHMYNISG 535
               +++  F+P    + + I G
Sbjct: 796 FMKLVLDNKFVPSFASYCWVIHG 818



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 47/345 (13%)

Query: 215 LGVSPKVVTYNILIDGYCK--KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            GV+ K V   +L+   C+  + G+ K+  A      M E G   +   ++TL+    K 
Sbjct: 119 FGVAQKAV---VLLIQECEDSENGVVKLMGA---LDGMTELGFRLSYPCYSTLLMCLAKL 172

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG------------------------ 308
                A  V+  M + G   G + Y +++N LC +G                        
Sbjct: 173 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 232

Query: 309 -----------KLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
                       L EA  + ++M      +PN VT + LI+G C+   +E+A  L  ++ 
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G  PS  TY  LI A C  G  + A  M + M  +  +P+V TY  LI  L REG +E
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 352

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +  +++ +G+  G++T+N L+   CK+G    A  LL     MEK    PNI TYN
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS---VMEKGNCKPNIRTYN 409

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            L++G C+  K   A  LL  +++ GL+P++ TY I+ +   ++G
Sbjct: 410 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 454



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 186/471 (39%), Gaps = 122/471 (25%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI-IIDMLMLAYVKNMKPHLGFEA 138
           P I +F  +     K   V + F  LS      C+ +I   + LM    +  K +  F  
Sbjct: 368 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 427

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            +R  D GL    ++ N L+    KEG+      ++  M    +E +  +F  +++GLCK
Sbjct: 428 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 487

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------------------- 235
            G+L +A+ I+  M   G+S   VT+  LIDG+CK G                       
Sbjct: 488 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 547

Query: 236 ------GIGKMYK---ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                  +GK YK   A+A+   M++ G++P+ VT   LI+G C+    + ++K+ E M 
Sbjct: 548 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607

Query: 287 SHGIAAGVVTYNSLINGLCVDGK-----------------------------------LD 311
             G +  V TY  +INGLC +G+                                   LD
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 667

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD--DISEQGLS-------- 361
            A  +   M+ +G +PN    +AL++GF        AR L    D+  + LS        
Sbjct: 668 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNC 727

Query: 362 ----------PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD------------- 398
                     P+   YN L+   CKEGR+ +A  +   M+  G+ PD             
Sbjct: 728 LSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKT 787

Query: 399 ---------------------VSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
                                 ++Y  +I GL  EG V+  + ++++LV +
Sbjct: 788 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 189/366 (51%), Gaps = 11/366 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV++   LL A+ K   F +   V  EM+ +    N+ ++N ++NG+C+ G+++ A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I+  + S G  P +V+Y  ++ G C      +      +F +MV+   +PNEVTF+ L
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLC---AARRWDDVKVLFAEMVDKKCVPNEVTFDML 298

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +  FC+   +  A++V ++M  HG        N +IN +C  G++D+A    + M   G 
Sbjct: 299 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ ++   ++ G C+    E A+ L  ++  +   P+ +T+NT I   C++G +E A  
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M + G    + TYN L+ G   +G V+    + N L         +TY  L+  LC
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLC 475

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
              +   A  LL EM     +K  P N VT+NVL+  FCQKG +E+A  L+N+++E G  
Sbjct: 476 HAERLDAAAELLAEMI----QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 505 PNQTTY 510
           PN  T+
Sbjct: 532 PNLITF 537



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 214/419 (51%), Gaps = 38/419 (9%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E   R   YG +  ++S   +L+ L    +++DV+ ++ EM  ++   N  +F+ ++   
Sbjct: 243 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 302

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C+ G + +A  +++ M   G +P     NI+I+  CK+G +                   
Sbjct: 303 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 362

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+   A  +  +MV     PNEVTFNT I   C+   I  A+K+ E 
Sbjct: 363 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 422

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  +G + G+VTYN+L++G CV G++D A+ L + +     +PN +T   L+ G C  + 
Sbjct: 423 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAER 479

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++ A  L  ++ ++    + +T+N L+  +C++G +E+A  + N M++ G  P++ T+N 
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G++++ N E    +++ LV+ G+    +TY+ +V  L ++ ++++A+ +L  +  M 
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                P +  YN ++   C++ + + A      ++  G +PN++TY I+ E +  +G +
Sbjct: 600 MR---PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 655



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 9/299 (3%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M   G  P VVTY +L++  CK  G G+   A  V  +M   G  PN VT+N +I+G C+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGE---AMNVLDEMRAKGCTPNIVTYNVIINGMCR 234

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           +  +  A ++   + S+G    +V+Y +++ GLC   + D+   L  EM+     PN VT
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            + L+  FC+  +VE+A  +   +S+ G +P+    N +I+A CK+GR++DA+   N+M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  PD  +Y  ++ GL R G  E  + ++ E+V        VT+N  +  LC+ G  +
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A+ L++ M +         IVTYN L+ GFC +G+++ A  L N L  +   PN  TY
Sbjct: 415 QAIKLIELMPEYGCSV---GIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITY 467



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 11/396 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L   +V  K  P   +F   +  F + G       +   +S        N+ + ++++ A
Sbjct: 279 LFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS--QHGCTPNTTLCNIVINA 336

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K  +    ++     G YG     +S   +LR L + G++E  + +  EM R+    N
Sbjct: 337 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             +FN  +  LC+ G + +A  ++E M   G S  +VTYN L+ G+C +G      + D+
Sbjct: 397 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG------RVDS 450

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
             +        PN +T+ TL+ G C  E + AA ++  EM         VT+N L++  C
Sbjct: 451 ALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFC 510

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G ++EA+ L ++MM  G  PN++T N L++G  K    E+A  L   +  +G+S   I
Sbjct: 511 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 570

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY++++D   +E R E+A  M +++ D G+ P V  YN ++  L +    +   +    +
Sbjct: 571 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 630

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           V+NG      TY IL+  L  +G  K+A  +L E++
Sbjct: 631 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 666



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
           SA       M   G    VVTY  L+  +C      EA+ + DEM A G  PN+VT N +
Sbjct: 169 SATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVI 228

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ING C++  V+ A+ + + +S  G  P +++Y T++   C   R +D   +   M+D+  
Sbjct: 229 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 288

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+  T++ L+    R G VE    ++ ++  +G        NI++ A+CK G+   A  
Sbjct: 289 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 348

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            L+ M         P+ ++Y  +++G C+ G+ E A  LL E++ K   PN+ T+     
Sbjct: 349 FLNNMGMYGCN---PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 405

Query: 516 EMMEKGFI 523
            + +KG I
Sbjct: 406 ILCQKGLI 413



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 6/253 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +YG    +++ N L+     +G+ +    ++  +     E N  ++  +L GLC A +L+
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLD 481

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A++++ +M         VT+N+L+  +C+KG +    +A  +   M+E+G  PN +TFN
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFV---EEAMELVNQMMEHGCTPNLITFN 538

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+DG  KD N   A+++   + S G++   +TY+S+++ L  + + +EA+ +   +   
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P V   N ++   CK+   ++A   F  +   G  P+  TY  LI+    EG +++A
Sbjct: 599 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 658

Query: 384 FAMRNSMLDRGVL 396
             + + +  +GVL
Sbjct: 659 RYVLSELYAKGVL 671



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 3/177 (1%)

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G  PSV+TY  L++A CK     +A  + + M  +G  P++ TYN +I G+ REG V+
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             + I+N L + G +  +V+Y  ++  LC   +      L  EM     +K  PN VT++
Sbjct: 240 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD---KKCVPNEVTFD 296

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +L++ FC+ G +E A  +L ++ + G  PN T   IV   + ++G + D    + N+
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           +G S        R+  + ++  G +  +VTY +L+ A+CK     +A+++LDE   M  +
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDE---MRAK 216

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              PNIVTYNV+I G C++G+++DA  +LN L   G  P+  +Y  V
Sbjct: 217 GCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTV 263


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++G  K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYKPSVVT 418



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+ G+ K+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 163/275 (59%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+ GF K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A VLFD++ ++GL P+ +T
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M    KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI---KENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+    K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY                 ++ 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 208/378 (55%), Gaps = 18/378 (4%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+R+  K G F++   V+  MK   +  ++ +FN +L  L K G+ N A  + ++M S
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLS 219

Query: 215 -LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             GV+P   T+NILI G+CK   + + ++    FK+M      P+ VT+NTL+DG C+  
Sbjct: 220 TYGVTPDTYTFNILIRGFCKNSMVDEGFR---FFKEMSRFKCDPDLVTYNTLVDGLCRAG 276

Query: 274 NISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
            ++ A  V   M   S  +   VVTY +L+ G C+  ++DEA+ + +EM++ GLKPN +T
Sbjct: 277 KVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT 336

Query: 332 SNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            N LI G C+ + ++K + +F+  +   G  P   T NTL++A+C  G + DA  +   M
Sbjct: 337 YNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV-------NNGMRAGLVTYNILVGA 443
           +   V PD +TY+ LI  L + GN E    + +EL        ++G    +  Y  +   
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEF 456

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LC++GK+ KA    + +F+   ++   + +++ +LIKG C++G  E    LL  +L +  
Sbjct: 457 LCRNGKTAKA----ERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDF 512

Query: 504 IPNQTTYQIVREEMMEKG 521
           +P+  TYQ + + +++KG
Sbjct: 513 VPDLETYQSLIDGLLQKG 530



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 63/457 (13%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           + R F +S K  R++ ++ L  R  +SL        IRS+     K G F     +F+++
Sbjct: 136 VARNFLFSIKR-RSNGTVKLEDRFFNSL--------IRSY----GKAGLFQESVQVFNSM 182

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVLSCNQLLRALVKE 164
            +   S   + +  + L+L  +K  + ++    F      YG+     + N L+R   K 
Sbjct: 183 KSVGVS--PSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKN 240

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM--KSLGVSPKVV 222
              ++    +KEM R + + +L ++N +++GLC+AGK+N A +++  M  KS  ++P VV
Sbjct: 241 SMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVV 300

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY  L+ GYC K  I +   A  VF++MV  G+ PNE+T+NTLI G C+ + I    ++F
Sbjct: 301 TYTTLVRGYCMKHEIDE---ALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIF 357

Query: 283 E-EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           E  +G  G      T N+L+N  C  G L++A+ + ++MM   ++P+  T + LI   C+
Sbjct: 358 EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQ 417

Query: 342 KKLVEKARVLFDDISEQ-------GLSPSVITYNT------------------------- 369
           +   E+A  LFD++SE+       G +P V  Y +                         
Sbjct: 418 RGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 477

Query: 370 ---------LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
                    LI  +C+EG  E  + +   ML R  +PD+ TY  LI GL ++G       
Sbjct: 478 TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQ 537

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            + +++ +       T++ ++  L   G + ++   +
Sbjct: 538 TLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFI 574



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/354 (19%), Positives = 140/354 (39%), Gaps = 47/354 (13%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++  ++ LM A+      +   E F++     ++    + + L+R L + G FE  E ++
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428

Query: 175 KEMKRRRIELNLD-------SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
            E+  + I L  D       ++  +   LC+ GK  KA  +   +   G    + ++ IL
Sbjct: 429 DELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPL-SFKIL 487

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I G+C++G     Y+   +   M+    +P+  T+ +LIDG  +      A +  E+M  
Sbjct: 488 IKGHCREGTFEAGYELLVL---MLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK 544

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI----------- 336
                   T++S++  L   G   E+      M+   ++ N+  S   +           
Sbjct: 545 SSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDK 604

Query: 337 ----------NGFC-------------KKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                     NG+              +K L+    +LF    E+  +  +   +T+I+ 
Sbjct: 605 AFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAHKLLLF--CLEKHQNVDIDMCDTVIEG 662

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            CK  R  +AF +   ++++G    +     L   L   G +E V+ +   + N
Sbjct: 663 LCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFLSKRMPN 716


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 212/398 (53%), Gaps = 10/398 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M       N+ S+N +
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164

Query: 193 LNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           L GLC   +  +A ++   M D +  G  P VV+Y  +I+G+ K+G   K Y   + + +
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY---STYHE 221

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M++ GILP+ VT+N++I   CK + +  AM+V   M  +G+    +TYNS+++G C  G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             EA+    +M + G++P+VVT + L++  CK     +AR +FD ++++GL P + TY T
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+  Y  +G + +   + + M+  G+ PD   ++ LI   +++G V+    + +++   G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    VTY  ++G LCK G+ + A+   ++M     E   P  + YN LI G C   K E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI---DEGLSPGNIVYNSLIHGLCTCNKWE 458

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            A  L+ E+L++G+  N   +  + +   ++G + + E
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 231/476 (48%), Gaps = 23/476 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTC--------------SDS 111
           ++ +L  A+   K    L+  VKNG      T   I H   +               SD 
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  + +   +LM    KN +     + F      GLK  + +   LL+    +G   ++ 
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +   M R  I  +   F+ ++    K GK+++A  +   M+  G++P  VTY  +I   
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G   ++  A   F+ M++ G+ P  + +N+LI G C       A ++  EM   GI 
Sbjct: 417 CKSG---RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              + +NS+I+  C +G++ E+  L + M+  G+KPNV+T N LING+C    +++A  L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              +   GL P+ +TY+TLI+ YCK  RMEDA  +   M   GV PD+ TYN ++ GL +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                  + +   +  +G +  L TYNI++  LCK+  +  A+ +   +  M+ + +   
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR- 652

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             T+N++I    + G+ ++A  L       GL+PN  TY+++ E ++ +G + +++
Sbjct: 653 --TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 187/374 (50%), Gaps = 8/374 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + K GK      +F  +      L  N++    ++    K+ +       F++  D GL 
Sbjct: 381 YAKQGKVDQAMLVFSKMR--QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
              +  N L+  L    K+E  E +  EM  R I LN   FN +++  CK G++ ++  +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E M  +GV P V+TYN LI+GYC  G   KM +A  +   MV  G+ PN VT++TLI+G
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAG---KMDEAMKLLSGMVSVGLKPNTVTYSTLING 555

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           +CK   +  A+ +F+EM S G++  ++TYN ++ GL    +   A  L   +  SG +  
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           + T N +++G CK KL + A  +F ++    L     T+N +IDA  K GR ++A  +  
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
           +    G++P+  TY  +   +  +G +E +  +   + +NG        N +V  L + G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735

Query: 449 KSKKA---VSLLDE 459
           +  +A   +S++DE
Sbjct: 736 EITRAGTYLSMIDE 749



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 45/366 (12%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ED  +V+ E+ RR    ++   N  L            +D+  D  +  VS     YN  
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRAL------------ADVARDSPAAAVS----RYN-- 73

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
                      +M +A A       + + P+  T+  LI   C+   +         +  
Sbjct: 74  -----------RMARAGA-------DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK 115

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +   
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRS 174

Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           ++A  L   +++    G  P V++Y T+I+ + KEG  + A++  + MLDRG+LPDV TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +IA L +   ++    ++N +V NG+    +TYN ++   C  G+ K+A+  L    K
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK---K 291

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTY++L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 352 LVEMHG 357


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 240/518 (46%), Gaps = 85/518 (16%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           + +H F K GK      ++H +       D +  NSII  +     V N +  L     +
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL-----R 175

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           +  D G+  + ++   ++      G++E+   +++EM  R +  ++ S+N  ++ LCK G
Sbjct: 176 QMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHG 235

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +  +A++I   M + G  P +VTY IL+ GY  +G    M    + F  M  +GI+ N +
Sbjct: 236 RSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMM---SFFNTMKGDGIVANCL 292

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            F  LID + K   +  AM +  EM   G++  V TY++LI+ LC  G+L +AV   ++M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 321 MASGLKPNVVTSNALINGFC------------------------------------KKKL 344
           + +G++PN V  ++LI GFC                                    K+  
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           V  A  +FD + + G    +I +NTLID YC  G M  AF++ ++M+  G+ PD  TYN 
Sbjct: 413 VMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT 472

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G  + G ++   N+  E+ +  ++   VTYNI++  L + G++  A  +L EM    
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCG 532

Query: 465 KEKKWPNIVTYNVLIKGFCQKG-----------------------------------KLE 489
                P   TYN+++KG C+                                     + E
Sbjct: 533 TTVSLP---TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +A  L + + + GL+PN +TY I+   ++++G + + +
Sbjct: 590 EAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 203/376 (53%), Gaps = 7/376 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N ++    KEGK      +Y EM ++    ++ + N ++N LCKA  ++ A  ++ 
Sbjct: 116 VVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLR 175

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   GV P  VTY  +I GY     +G+  +A  +F++M   G++P+ V++N+ +D  C
Sbjct: 176 QMVDNGVPPNKVTYTSMIHGYST---LGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K      A ++F  M + G    +VTY  L++G   +G   + ++  + M   G+  N +
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
               LI+ + K+ ++++A ++  ++  QGLSP V TY+TLI A C+ GR+ DA    N M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM-RAGLVTYNILVGALCKDGK 449
           +  GV P+   Y+ LI G    G++   + ++ E++NNG+ R  +  +N +V ++CK+G+
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A  + D + K   E+   +I+ +N LI G+C  G++  A  +L+ ++  G+ P+  T
Sbjct: 413 VMDAHHIFD-LVKDIGERS--DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469

Query: 510 YQIVREEMMEKGFIPD 525
           Y  +     + G I D
Sbjct: 470 YNTLVNGYFKSGRIDD 485



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 188/385 (48%), Gaps = 46/385 (11%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL--DS 188
           +P LG   F R    GLK+   + N +L+ L    + +D     K + RR  EL    D+
Sbjct: 23  RPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA---VKVLLRRMTELGCVPDA 79

Query: 189 FNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           F++  VL  LC   +  +A D++  M                +G C              
Sbjct: 80  FSYAIVLKRLCDDNRSQQALDLLRMMAKE-------------EGVCS------------- 113

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                     P+ VT+NT+I GF K+  I  A  ++ EM   G    VVT+NS+IN LC 
Sbjct: 114 ----------PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCK 163

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              +D A  L  +M+ +G+ PN VT  ++I+G+      E+A  +F +++ +GL P +++
Sbjct: 164 ARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVS 223

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N+ +D+ CK GR ++A  +  SM  +G  P++ TY  L+ G + EG    + +  N + 
Sbjct: 224 WNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK 283

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G+ A  + + IL+ A  K G   +A+ +L E   M+ +   P++ TY+ LI   C+ G
Sbjct: 284 GDGIVANCLVFTILIDAYAKRGMMDEAMLILSE---MQGQGLSPDVFTYSTLISALCRMG 340

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQ 511
           +L DA    N+++  G+ PN   Y 
Sbjct: 341 RLADAVDKFNQMIGTGVQPNTVVYH 365



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 191/424 (45%), Gaps = 44/424 (10%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           + +S+      P I ++   LH +   G F  + + F+ +    D +  N ++  +L+ A
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK--GDGIVANCLVFTILIDA 300

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV--------------- 170
           Y K                 GL   V + + L+ AL + G+  D                
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360

Query: 171 ---------------------EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
                                E VY+ M       N+  FN +++ +CK G++  A  I 
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           + +K +G    ++ +N LIDGYC    +G+M KA +V   M+  GI P+  T+NTL++G+
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCL---VGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K   I   + +F EM    I    VTYN +++GL   G+   A  +  EM+  G   ++
Sbjct: 478 FKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSL 537

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            T N ++ G C+    ++A V+F  +    +  ++ T NT+I++     R E+A  + ++
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSA 597

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           + D G++P+ STY  +I  L +EG+VE   N+ + +  +G        N  +  L + G+
Sbjct: 598 ISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGE 657

Query: 450 SKKA 453
             KA
Sbjct: 658 IVKA 661



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 38/353 (10%)

Query: 219 PKVVTYNILIDGYCKK-------GGIGKMYKA-----------------------DAV-- 246
           P + TY ++++G C+           G++ +                        DAV  
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 247 -FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAA-GVVTYNSLING 303
             + M E G +P+  ++  ++   C D     A+ +   M    G+ +  VVTYN++I+G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
              +GK+ +A  L  EMM  G  P+VVT N++IN  CK + V+ A +L   + + G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            +TY ++I  Y   GR E+A  M   M  RG++PD+ ++N  +  L + G  +    I  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +   G R  +VTY IL+     +G     +S  +    M+ +    N + + +LI  + 
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFN---TMKGDGIVANCLVFTILIDAYA 302

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
           ++G +++A  +L+E+  +GL P+  TY  +   +   G + D       + GT
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGT 355


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 204/433 (47%), Gaps = 40/433 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-V 173
           +S    +L+ AY K        E+F R  ++  +  V + N +LR +++E  F  + + V
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y EM +     NL +F  +++GL K G+ + A  + +DM   G+SP  VTY ILI G C+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G       A  +F +M  +G  P+ V  N L+DGFCK   +  A ++       G   G
Sbjct: 246 RGSADD---ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +  Y+SLI+GL    +  +A  L   M+   +KP+++    LI G  K   +E A  L  
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  +G+SP    YN +I A C  G +E+  +++  M +    PD  T+  LI  + R G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------- 460
            V     I  E+  +G    + T+N L+  LCK G+ K+A  LL +M             
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482

Query: 461 ------FKMEKEK-----------------KWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                 F    E                    P+IV+YNVLI GFC+ G ++ A  LLN 
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542

Query: 498 LLEKGLIPNQTTY 510
           L  KGL P+  TY
Sbjct: 543 LQLKGLSPDSVTY 555



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 184 LNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +++DS+ F  +++   K G   KA +    MK     P V TYN+++    ++     + 
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML- 181

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A AV+ +M++    PN  TF  L+DG  K    S A K+F++M   GI+   VTY  LI
Sbjct: 182 -AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC  G  D+A  L  EM  SG  P+ V  NAL++GFCK   + +A  L     + G  
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             +  Y++LID   +  R   AF +  +ML + + PD+  Y  LI GLS+ G +E    +
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           ++ + + G+      YN ++ ALC  G  ++  SL  EM + E    +P+  T+ +LI  
Sbjct: 361 LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE---SFPDACTHTILICS 417

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+ G + +A  +  E+ + G  P+  T+  + + + + G
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 7/340 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F  V++ L +    +     +E++KS GVS     + +LI  Y K   +G   KA   F 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAK---MGMAEKAVESFG 151

Query: 249 DMVENGILPNEVTFNTLIDGFCKDE-NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            M E    P+  T+N ++    ++E     A  V+ EM     +  + T+  L++GL   
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+  +A  + D+M   G+ PN VT   LI+G C++   + AR LF ++   G  P  + +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N L+D +CK GRM +AF +       G +  +  Y+ LI GL R         +   ++ 
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
             ++  ++ Y IL+  L K GK + A+ LL  M     +   P+   YN +IK  C +G 
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSM---PSKGISPDTYCYNAVIKALCGRGL 388

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           LE+   L  E+ E    P+  T+ I+   M   G + + E
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 50/390 (12%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+  L +  ++     +Y  M ++ I+ ++  +  ++ GL KAGK+  A  ++  M S
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+SP    YN +I   C   G G + +  ++  +M E    P+  T   LI   C++  
Sbjct: 367 KGISPDTYCYNAVIKALC---GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV---- 330
           +  A ++F E+   G +  V T+N+LI+GLC  G+L EA  L  +M     +P  +    
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPASLFLRL 481

Query: 331 --TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             + N   +   +   + KA       ++ G SP +++YN LI+ +C+ G ++ A  + N
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGV-----------------RNIMNELVNNGMR 431
            +  +G+ PD  TYN LI GL R G  E                   R++M        R
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRK--R 599

Query: 432 AGLVTYNILVGAL----C-------------KDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
             LV +N+ +  L    C             K+G++++A   L  + +++  K    +  
Sbjct: 600 KVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERA---LRRLIELDTRKDELTLGP 656

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           Y + + G CQ G+  +A  + + L EK ++
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKIL 686



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 37/185 (20%)

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++   G+S     +  LI AY K G  E A      M +    PDV TYN ++     
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL----- 169

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                  R +M E V          YN ++   C                        PN
Sbjct: 170 -------RVMMREEVF--FMLAFAVYNEMLKCNCS-----------------------PN 197

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           + T+ +L+ G  +KG+  DA  + +++  +G+ PN+ TY I+   + ++G   D     Y
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257

Query: 532 NISGT 536
            +  +
Sbjct: 258 EMQTS 262



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 66/135 (48%), Gaps = 4/135 (2%)

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  +I  LS +   +     + EL + G+      + +L+ A  K G ++KAV   +   
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV---ESFG 151

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKL-EDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +M++    P++ TYNV+++   ++      A  + NE+L+    PN  T+ I+ + + +K
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211

Query: 521 GFIPDIEGHMYNISG 535
           G   D +    +++G
Sbjct: 212 GRTSDAQKMFDDMTG 226


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 234/505 (46%), Gaps = 51/505 (10%)

Query: 3   CSANSTIEDITELIRNHHW---------SKLKNTDPNTVILQLFNSDADPVLILRYFCWS 53
           C      + +  ++   HW         S L +T  N V+L L  S     +   +F W 
Sbjct: 33  CGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNL--SLDGCCVSWAFFKWV 90

Query: 54  TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
              L   HSL  +  ++H+L   K++   ++ L         +S S + +A+    D   
Sbjct: 91  ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPS-VLNAVVRIHDDPD 149

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
            NS I+  L++ Y  +       + F+    +G K  + +C  LL +L K      V  V
Sbjct: 150 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 209

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           YK+M R  +  N+  FN +++  CK+G + KA  ++ +M+S  + P + TYN LI  YCK
Sbjct: 210 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 269

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN-ISAAMKVFEEMGSHGIAA 292
           KG     Y+A  +   M   G+ P+ VT+N+LI GFC++ N +  A+++ E M   G+  
Sbjct: 270 KG---MHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHP 326

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEM-------------------------------- 320
           GVVTYNS++  LC +GK+ +A  L +EM                                
Sbjct: 327 GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVK 386

Query: 321 ---MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
              + +GLKP+  T  ALI+GFCK   V+ A+    ++ + G SPS  TY+ L+D+Y  +
Sbjct: 387 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQ 446

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
              E    + + +  +G+  D+S Y  LI  L +   +E    I   +   GM+   V Y
Sbjct: 447 DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVY 506

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
             L  A  K GK+  A  +LDEM K
Sbjct: 507 TSLAYAYFKAGKAIAASDMLDEMDK 531



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 24/382 (6%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-------------RIELNLDSFNFVLN 194
           K S+ S   ++  L K  +F+  + + + +  R             RI  + DS + +L+
Sbjct: 97  KHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILS 156

Query: 195 GL----CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            L      +     A  + E M+  G  P +    +L++   K      ++K   V+K M
Sbjct: 157 WLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK---VYKKM 213

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           V  G++PN   FN LI   CK  ++  A ++  EM S  I   + TYN+LI+  C  G  
Sbjct: 214 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 273

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDISEQGLSPSVITYNT 369
            EA+ ++D M   G+ P++VT N+LI GFC++   +E+A  L + +  +GL P V+TYN+
Sbjct: 274 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNS 333

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           ++   C+EG+++DA  + N M +R V PD  T N LI    + G++     +  +++  G
Sbjct: 334 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 393

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++    T+  L+   CK  +   A   L EM         P+  TY+ L+  +  +   E
Sbjct: 394 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS---PSYSTYSWLVDSYYDQDNKE 450

Query: 490 DANGLLNELLEKGLIPNQTTYQ 511
               L +EL  KGL  + + Y+
Sbjct: 451 AVIRLPDELSRKGLFVDISVYR 472



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 4/274 (1%)

Query: 146 GLKSSVLSCNQLLRALVKE-GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G+   +++ N L+    +E    E+   + + M+   +   + ++N +L  LC+ GK+  
Sbjct: 287 GVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 346

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+ ++ +M    V P  VT N LI+ YCK G +G   K   V K M+E G+ P++ TF  
Sbjct: 347 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK---VKKKMLEAGLKPDQFTFKA 403

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI GFCK   + +A +   EM   G +    TY+ L++        +  + L DE+   G
Sbjct: 404 LIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKG 463

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L  ++    ALI   CK   +E A  +F  +  +G+    + Y +L  AY K G+   A 
Sbjct: 464 LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAAS 523

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            M + M  R ++  +  Y C  A  + +G++ G+
Sbjct: 524 DMLDEMDKRRLMITLKIYRCFSASYAGDGSILGL 557



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A+ + + M   G KP++     L+N   K +L      ++  +   G+ P++  +N L
Sbjct: 169 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 228

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I A CK G +E A  + N M  R + PD+ TYN LI+   ++G       I + +   G+
Sbjct: 229 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 288

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTYN L+   C++    +    L E+  ME E   P +VTYN +++  C++GK++D
Sbjct: 289 SPDIVTYNSLIYGFCREVNDLEEALRLREV--MEVEGLHPGVVTYNSILRKLCEEGKIKD 346

Query: 491 ANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           AN LLNE+ E+ + P+  T                   V+++M+E G  PD
Sbjct: 347 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 397



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ N +LR L +EGK +D   +  EM  R++E +  + N ++N  CK G +  A
Sbjct: 323 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 382

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + + M   G+ P   T+  LI G+CK   + ++  A     +M++ G  P+  T++ L
Sbjct: 383 MKVKKKMLEAGLKPDQFTFKALIHGFCK---LHEVDSAKEFLFEMLDAGFSPSYSTYSWL 439

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D +   +N  A +++ +E+   G+   +  Y +LI  LC   K++ A  +   M   G+
Sbjct: 440 VDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 499

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           K + V   +L   + K      A  + D++ ++ L  ++  Y     +Y  +G +   F
Sbjct: 500 KGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 558


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 203/371 (54%), Gaps = 9/371 (2%)

Query: 132 PHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           P L      F++A D G  S   + N L+  LV+    E     Y++M      +N  S 
Sbjct: 52  PQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSL 110

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + +L    +  K   A  ++  M   G +  V  +NIL+ G C+    GK   A ++ ++
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLRE 167

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M  N ++P+  ++NT+I GFC+ + +  A+++  EM   G +  +VT+  LI+  C  GK
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +DEA+    EM   GL+ ++V   +LI GFC    +++ + LFD++ E+G SP  ITYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI  +CK G++++A  +   M++RGV P+V TY  LI GL   G  +    ++N ++   
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                VTYNI++  LCKDG    AV +++    M+K +  P+ +TYN+L+ G C KG L+
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE---LMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 490 DANGLLNELLE 500
           +A+ LL  +L+
Sbjct: 405 EASKLLYLMLK 415



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 6/401 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM   V++    L F  +++  +     + +S + LL   V+  K      V   M +R 
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-M 240
              N+ + N +L GLC+  +  KA  ++ +M+   + P V +YN +I G+C+    GK +
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE----GKEL 193

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA  +  +M  +G   + VT+  LID FCK   +  AM   +EM   G+ A +V Y SL
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I G C  G+LD   AL DE++  G  P  +T N LI GFCK   +++A  +F+ + E+G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P+V TY  LID  C  G+ ++A  + N M+++   P+  TYN +I  L ++G V     
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           I+  +     R   +TYNIL+G LC  G   +A  LL  M K +     P++++YN LI 
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK-DSSYTDPDVISYNALIH 432

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C++ +L  A  + + L+EK    ++ T  I+    ++ G
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 209/441 (47%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N + +  L+  YV+  K    F         G   +V + N LL+ L +  +      + 
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM+R  +  ++ S+N V+ G C+  +L KA ++  +MK  G S  +VT+ ILID +CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G +                                G++ +  A+F +++E G  P  +T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI GFCK   +  A ++FE M   G+   V TY  LI+GLC  GK  EA+ L + M+ 
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
              +PN VT N +IN  CK  LV  A  + + + ++   P  ITYN L+   C +G +++
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 383 AFAMRNSMLDRGVL--PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           A  +   ML       PDV +YN LI GL +E  +    +I + LV        VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + +  K G   KA+ L  +   +   K   N  TY  +I GFC+ G L  A GLL ++  
Sbjct: 466 LNSTLKAGDVNKAMELWKQ---ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
             L P+   Y  +   + ++G
Sbjct: 523 SELQPSVFDYNCLLSSLCKEG 543



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 210/440 (47%), Gaps = 18/440 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  F   G+      +F  +    DS C  +I  + L+  + K  +     E F+   
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPC--AITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V +   L+  L   GK ++   +   M  +  E N  ++N ++N LCK G + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------ADAVFKDMVENGILP 257
            A +I+E MK     P  +TYNIL+ G C KG + +  K       D+ + D       P
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD-------P 422

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +++N LI G CK+  +  A+ +++ +     A   VT N L+N     G +++A+ L 
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            ++  S +  N  T  A+I+GFCK  ++  A+ L   +    L PSV  YN L+ + CKE
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A+ +   M      PDV ++N +I G  + G+++   +++  +   G+   L TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + L+    K G   +A+S  D+M     E   P+    + ++K    +G+ +    L+ +
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFE---PDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 498 LLEKGLIPNQTTYQIVREEM 517
           L++K ++ ++     V + M
Sbjct: 660 LVDKDIVLDKELTCTVMDYM 679



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI---AGLSREGNVEGVRNIMNE 424
           N L+    +    E AF+    ML+     +  + + L+     + + G   GV  +M  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM-- 133

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
            +  G    +  +NIL+  LC++ +  KAVSLL EM    +    P++ +YN +I+GFC+
Sbjct: 134 -LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM---RRNSLMPDVFSYNTVIRGFCE 189

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
             +LE A  L NE+   G   +  T+ I+ +   + G + +  G +
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 205/423 (48%), Gaps = 38/423 (8%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLN 203
           +GL + V  C  L+ A  +     +   V+++M K      N  +++ +++GLC+AG+L 
Sbjct: 159 FGLDTHV--CTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLE 216

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M   G  P   TY +LI   C    IG   KA  +  +M     +PN  T+ 
Sbjct: 217 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCD---IGMTDKAMKMLDEMATKACVPNVHTYT 273

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  C++  I  A  VF +M  HG+  G++T+N+LING C +G +  A  L   M   
Sbjct: 274 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 333

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KPN+ T N L+ G C+     KA +L   + + GL P  +TYN L+D +CKEG++  A
Sbjct: 334 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 393

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + NSM   G+ PD  T+  LI GL + G +E    I+  +V  G+    VT+  L+  
Sbjct: 394 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 453

Query: 444 LCKDGKSKKAVSLLDEMF--------------------------------KMEKEKKWPN 471
            CK GK+K    L + M                                 KM K    P+
Sbjct: 454 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           +VT+ +LI+G C+ G+   +  +L  + + G  PN  TY I+   +   G + + E  ++
Sbjct: 514 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 573

Query: 532 NIS 534
           ++S
Sbjct: 574 SMS 576



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L +EGK E+   V+++M +  +   + +FN ++NG CK G +  A  ++  M+   
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P + TYN L++G C+   + K YKA  + + +V+NG+LP+ VT+N L+DGFCK+  ++
Sbjct: 335 CKPNIRTYNELMEGLCR---VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 391

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +F  M S G+     T+ +LI+GLC  G+L++A  +   M+  G+  + VT  ALI
Sbjct: 392 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 451

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK    +    LF+++ E     +  T+N  +DA  K+ ++ +A AM   M+  G++
Sbjct: 452 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 511

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V T+  LI G  R G       ++  +   G    + TY I++  LC +G+ ++A ++
Sbjct: 512 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 571

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L   F M      PN  TY VL+K   + G+L+ A  +++ +++ G  PN   Y
Sbjct: 572 L---FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 622



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 171/339 (50%), Gaps = 7/339 (2%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           VY+ M      L    +  V+N LCK G +  A      +  LG          L+   C
Sbjct: 115 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 174

Query: 233 KKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           ++  +G+ ++   VF+ M  E    PN VT++ LI G C+   +  A ++ +EM   G  
Sbjct: 175 RRDDLGEAFR---VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TY  LI   C  G  D+A+ + DEM      PNV T   LI+  C++  +E+A  +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + + GL P +IT+N LI+ YCKEG +  AF + + M      P++ TYN L+ GL R
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                    ++  +V+NG+    VTYNILV   CK+G+   A ++ + M     E   P+
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE---PD 408

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             T+  LI G C+ G+LE ANG+L  +++KG+  ++ T+
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 229/519 (44%), Gaps = 56/519 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           ++L  +      P + ++   +    + GK    + +F  +      LC   I  + L+ 
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML--KHGLCPGIITFNALIN 312

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y K       F+          K ++ + N+L+  L +  K      + + +    +  
Sbjct: 313 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 372

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  ++N +++G CK G+LN A +I   M S G+ P   T+  LIDG CK   +G++ +A+
Sbjct: 373 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK---LGRLEQAN 429

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   MV+ GI  +EVTF  LIDG CK         +FE M  +       T+N  ++ L
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 489

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             D KL+EA A+  +MM  GL P+VVT   LI G C+      +  + + + + G SP+V
Sbjct: 490 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 549

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
            TY  +I+  C  GR+E+A  +  SM   GV P+  TY  L+    + G ++    I++ 
Sbjct: 550 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 609

Query: 425 LVNNGMR----------AGLVTYNILVG--ALCKDGK----------------SKKAVSL 456
           +V NG +          +G V  N  +G  AL   G                 S     L
Sbjct: 610 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRL 669

Query: 457 L--DEMFKMEKEKKWPNIVT---YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +  D   K+  E K   + T   YN L+ G C++G++ +A+ L  ++++ GL P++    
Sbjct: 670 MDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISS 729

Query: 512 IVREE---------------MMEKGFIPDIEGHMYNISG 535
           I+                  +++  F+P    + + I G
Sbjct: 730 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG 768



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 47/345 (13%)

Query: 215 LGVSPKVVTYNILIDGYCK--KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            GV+ K V   +L+   C+  + G+ K+  A      M E G   +   ++TL+    K 
Sbjct: 53  FGVAQKAV---VLLIQECEDSENGVVKLMGA---LDGMTELGFRLSYPCYSTLLMCLAKL 106

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG------------------------ 308
                A  V+  M + G   G + Y +++N LC +G                        
Sbjct: 107 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 166

Query: 309 -----------KLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
                       L EA  + ++M      +PN VT + LI+G C+   +E+A  L  ++ 
Sbjct: 167 TSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 226

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+G  PS  TY  LI A C  G  + A  M + M  +  +P+V TY  LI  L REG +E
Sbjct: 227 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 286

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
               +  +++ +G+  G++T+N L+   CK+G    A  LL     MEK    PNI TYN
Sbjct: 287 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS---VMEKGNCKPNIRTYN 343

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            L++G C+  K   A  LL  +++ GL+P++ TY I+ +   ++G
Sbjct: 344 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 388



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 145/286 (50%), Gaps = 7/286 (2%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YGL  SV++   L+    + G+      + + MK+     N+ ++  ++NGLC  G++ +
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  I+  M S GVSP   TY +L+  + K G + + ++   +   MV+NG  PN   ++ 
Sbjct: 568 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ---IVSTMVKNGCQPNSHIYSA 624

Query: 265 LIDGFC-KDENISA-AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           L+ GF   +  I A A+    ++ +  +++     N L + +     +D A+ +RDE+  
Sbjct: 625 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 684

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P     N L+ G CK+  + +A  L  D+ + GL P     +++I+ YCK  + ++
Sbjct: 685 CGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDN 742

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
                  +LD   +P  ++Y  +I GL  EG V+  + ++++LV +
Sbjct: 743 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 788


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 197/369 (53%), Gaps = 15/369 (4%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L K G+  +    Y +M  R    NL   N +L  LC+AG +++A   M   + + 
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQA---MAIFRGIQ 65

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENI 275
            SP V+T NILI+G+C+   +  + KA  +F +M +N  ++P   T+  +I  +CK + +
Sbjct: 66  CSPSVITLNILINGFCE---LQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNA 334
             A ++ EE  S   ++ V+   S+  G C   ++DEA  L  +M+     KP++V  N 
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN--SMLD 392
           +I+GFCK   V +A  + + +   G  P+ +TY TLID +CK G + +A  +    S  D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
               P+V T+N LI+GL +   +E    ++ ++    +RA   TY  L+  LCK G++ +
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
              + +EM +   E   P++VTY  L+   C+ G L+DA  ++  ++ KG+ P+ TTY +
Sbjct: 301 VSRVFEEMLR---EGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357

Query: 513 VREEMMEKG 521
           + E + E G
Sbjct: 358 LLEGLFENG 366



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 168/299 (56%), Gaps = 9/299 (3%)

Query: 192 VLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           V  G CKA ++++A  ++ DM +     P +V +N++I G+CK G + + Y+   + + +
Sbjct: 145 VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYE---MLETL 201

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS--HGIAAGVVTYNSLINGLCVDG 308
           V  G +PN VT+ TLIDGFCK  N+S A+++F+ + S  H     VVT+N+LI+GLC   
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L+ A  L  +M A  L+ +  T   L++G CK+    +   +F+++  +G +PSV+TY 
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TL+ A+CK G ++DA  +  SM+ +G+ PDV+TY  L+ GL   G V        +++  
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE 381

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
                 V Y+ LV   CK     +AV    EM      +  P+  T  +L++  C++G+
Sbjct: 382 RCPPCAVVYSALVRGCCKAALVDEAVKYYVEML---DRRLAPDPATCKLLVEMLCKRGR 437



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 194/401 (48%), Gaps = 40/401 (9%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-K 213
           N LL +L + G  +    +++ ++      ++ + N ++NG C+   L+KA ++  +M K
Sbjct: 42  NLLLASLCQAGTMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEK 98

Query: 214 SLGVSPKVVTYNILIDGYCK---------------------------KGGIGKMYKADAV 246
           +  + P+  TY  +I  YCK                             G  K  + D  
Sbjct: 99  NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEA 158

Query: 247 FK---DMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           ++   DMVE     P+ V +N +I GFCK   +  A ++ E + S G     VTY +LI+
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 303 GLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           G C  G L EA+ L   + +     +PNVVT NALI+G CK   +E A  L   +  + L
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
                TY TL+D  CK+GR  +   +   ML  G  P V TY  L+    + G+++  + 
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQ 338

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++  +V  G+   + TY +L+  L ++GK + A    +   K+ +E+  P  V Y+ L++
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE---KILRERCPPCAVVYSALVR 395

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C+   +++A     E+L++ L P+  T +++ E + ++G
Sbjct: 396 GCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 187/372 (50%), Gaps = 33/372 (8%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  +F+ ++ GLCKAG+L +A +    M      P +   N+L+   C+ G    M +A 
Sbjct: 2   NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAG---TMDQAM 58

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLING 303
           A+F+ +      P+ +T N LI+GFC+ + +  A+++F EM  +  +     TY ++I  
Sbjct: 59  AIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVLFDDISEQGLSP 362
            C   +LD+A  L +E  +S    +V+   ++  GFCK + V++A ++L D + ++   P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            ++ +N +I  +CK GR+ +A+ M  +++  G +P+  TY  LI G  + GN+     + 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 423 NELVNNGMRA--GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
             L +    A   +VT+N L+  LCK  + + A  L+ +M   +      +  TY  L+ 
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM---KARDLRADTFTYTTLMD 290

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEMMEKGFI 523
           G C++G+  + + +  E+L +G  P+  TY                 Q++R  M+ KG  
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR-SMVAKGIP 349

Query: 524 PDIEGHMYNISG 535
           PD+  +   + G
Sbjct: 350 PDVTTYTVLLEG 361



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 39/305 (12%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN  TF+ LI G CK   +  A++ + +M        +   N L+  LC  G +D+A+A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAY- 374
              +  S   P+V+T N LINGFC+ +L++KA  LF ++ +   L P   TY  +I  Y 
Sbjct: 61  FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 375 --------------------------------CKEGRMEDAFAMRNSMLD-RGVLPDVST 401
                                           CK  R+++A+ +   M++ +   PD+  
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +N +I G  + G V     ++  LV+ G     VTY  L+   CK G   +A+ L  ++ 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF-KVL 236

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                   PN+VT+N LI G C+  +LE A  L+ ++  + L  +  TY  + + + ++G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 522 FIPDI 526
              ++
Sbjct: 297 RTSEV 301


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 207/379 (54%), Gaps = 9/379 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL-DSFNFVLNGLCKAGKL 202
           D G +S+  +   ++  L K G         +++K R  +L++  +++ +++ LCK G +
Sbjct: 169 DMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMV 228

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A ++   M S G+ P +V YN LI G C     G+  +A  +  +M+  GI+PN  TF
Sbjct: 229 CEALNLFSGMTSKGIQPDLVAYNSLIHGLCN---FGRWKEATTLLGNMMRKGIMPNVQTF 285

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N L+D FCKD  IS A  +   M   G+   VVTYNS+I+G C+  ++ +AV + + M+ 
Sbjct: 286 NVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIH 345

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  PN+VT ++LI+G+CK K + KA  L  ++   GL+P V+T++TLI  +CK G+ E 
Sbjct: 346 KGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEA 405

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  +M +    P++ T   ++ GL +        ++  E+    +   +V YNI++ 
Sbjct: 406 AKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLD 465

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +C  GK   A     E+F     K    ++V Y  +IKG C++G L+DA  LL ++ E 
Sbjct: 466 GMCSFGKLNDA----QELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEEN 521

Query: 502 GLIPNQTTYQIVREEMMEK 520
           G +PN+ TY +    ++++
Sbjct: 522 GCLPNEFTYNVFVRGLLQR 540



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 189/373 (50%), Gaps = 36/373 (9%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-GKMYKADAV 246
           +F  ++NGLC  G + +A+   + ++ +G      TY  +I+G CK G   G +   + +
Sbjct: 143 TFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKI 202

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                 N  L   + ++T++D  CKD  +  A+ +F  M S GI   +V YNSLI+GLC 
Sbjct: 203 KG---RNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCN 259

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G+  EA  L   MM  G+ PNV T N L++ FCK  ++ +A+ +   +   G+ P V+T
Sbjct: 260 FGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVT 319

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YN++I  +C   +M DA  +   M+ +G LP++ TY+ LI G  +  N+     ++ E+V
Sbjct: 320 YNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMV 379

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSL-------------------LDEMFK----- 462
           N+G+   +VT++ L+G  CK GK + A  L                   LD +FK     
Sbjct: 380 NSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHS 439

Query: 463 --------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                   MEK     N+V YN+++ G C  GKL DA  L + L  KG+  +   Y  + 
Sbjct: 440 EAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMI 499

Query: 515 EEMMEKGFIPDIE 527
           + + ++G + D E
Sbjct: 500 KGLCKEGLLDDAE 512



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 197/363 (54%), Gaps = 6/363 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ + ++ +L K+G   +   ++  M  + I+ +L ++N +++GLC  G+  +A+ ++ 
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+ P V T+N+L+D +CK G I +   A  +   MV  G+ P+ VT+N++I G C
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISR---AKTIMGFMVHVGVEPDVVTYNSVISGHC 328

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               +  A+KVFE M   G    +VTY+SLI+G C    +++A+ L  EM+ SGL P+VV
Sbjct: 329 LLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVV 388

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T + LI GFCK    E A+ LF  + E    P++ T   ++D   K     +A ++   M
Sbjct: 389 TWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREM 448

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
               +  +V  YN ++ G+   G +   + + + L + G++  +V Y  ++  LCK+G  
Sbjct: 449 EKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLL 508

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A +LL    KME+    PN  TYNV ++G  Q+  +  +   L  +  KGL  + TT 
Sbjct: 509 DDAENLL---MKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTT 565

Query: 511 QIV 513
           +++
Sbjct: 566 ELL 568



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 182/341 (53%), Gaps = 17/341 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A ST  DSLC++ ++ + L L              F      G++  +++ N L+  L  
Sbjct: 214 AYSTIMDSLCKDGMVCEALNL--------------FSGMTSKGIQPDLVAYNSLIHGLCN 259

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G++++   +   M R+ I  N+ +FN +++  CK G +++A  IM  M  +GV P VVT
Sbjct: 260 FGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVT 319

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN +I G+C    + +M  A  VF+ M+  G LPN VT+++LI G+CK +NI+ A+ +  
Sbjct: 320 YNSVISGHCL---LSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLG 376

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM + G+   VVT+++LI G C  GK + A  L   M      PN+ T   +++G  K +
Sbjct: 377 EMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQ 436

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
              +A  LF ++ +  L  +V+ YN ++D  C  G++ DA  + + +  +G+  DV  Y 
Sbjct: 437 FHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYT 496

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +I GL +EG ++   N++ ++  NG      TYN+ V  L
Sbjct: 497 TMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 50/338 (14%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+H L    ++ +  + L   ++ G   +V T F+ L    D+ C++ +I          
Sbjct: 253 LIHGLCNFGRWKEATTLLGNMMRKGIMPNVQT-FNVLV---DNFCKDGMI---------S 299

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
             K  +GF         G++  V++ N ++       +  D   V++ M  +    NL +
Sbjct: 300 RAKTIMGFMV-----HVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG------------- 235
           ++ +++G CK   +NKA  ++ +M + G++P VVT++ LI G+CK G             
Sbjct: 355 YSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMH 414

Query: 236 ----------------GIGK-MYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                           G+ K  + ++A+  F++M +  +  N V +N ++DG C    ++
Sbjct: 415 EHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLN 474

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++F  + S GI   VV Y ++I GLC +G LD+A  L  +M  +G  PN  T N  +
Sbjct: 475 DAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFV 534

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            G  ++  + ++      +  +GLS    T   LI  +
Sbjct: 535 RGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF 572


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGCMPSVVT 418



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 213/397 (53%), Gaps = 9/397 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M +     N+ S+N +
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 193 LNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           L GLC   +  +A ++++ M   G    P VV+Y  +I+G+ K+G + K Y     + +M
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY---GTYHEM 225

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           ++ GILPN VT++++I   CK + +  AM+V   M  +G+     TYNS+++G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M + G++P+VVT N+L++  CK     +AR +FD ++++GL P + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  Y  +G + +   + + M+  G+ P+   ++ LI   +++G V+    + +++   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VTY  ++G LCK G+ + A+   ++M     E+  P  + YN LI   C   K + 
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L+ E+L++G+  +   +  + +   ++G + + E
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G        +H +      +  N +    ++ A  K        
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+  +  + N ++      G+ ++     K+M    +E ++ ++N +++ L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+  +A  + + M   G+ P++ TY  L+ GY  KG + +M+    +   MV NGI 
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIH 371

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN   F+ LI  + K   +  AM VF +M   G+    VTY ++I  LC  G++++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+   L P  +  N+LI+  C     +KA+ L  ++ ++G+    I +N++ID++CK
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGR+ ++  + + M+  GV PD+ TY+ LI G    G ++    ++  +V+ GM+   VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   CK  + + A+ L  E   ME     P+I+TYN++++G  Q  +   A  L  
Sbjct: 552 YNTLINGYCKISRMEDALVLFRE---MESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 497 ELLEKGLIPNQTTYQIV 513
            + E G     +TY I+
Sbjct: 609 GITESGTQLELSTYNII 625



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 53/485 (10%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++ +L  A+   K    L   VKNG   +  T              NSI+       Y  
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-------------NSIV-----HGYCS 281

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           + +P       K+    G++  V++ N L+  L K G+  +   ++  M +R ++  + +
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  +L G    G L +   +++ M   G+ P    ++ILI  Y K+G   K+ +A  VF 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG---KVDQAMLVFS 398

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M + G+ P+ VT+ T+I   CK   +  AM+ FE+M    ++ G + YNSLI+ LC+  
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K D+A  L  EM+  G+  + +  N++I+  CK+  V ++  LFD +   G+ P +ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YC  G+M++A  +  SM+  G+ PD  TYN LI G  +   +E    +  E+ ++
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAV----------------------------SLLDEM 460
           G+   ++TYNI++  L +  ++  A                             +L DE 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 461 FKMEKEKKWPNIV----TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +M +     ++     T+N++I    + G+ ++A  L   L   GL+P+  TY ++ E 
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 517 MMEKG 521
           ++E+G
Sbjct: 699 LIEQG 703



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  K+GK +    V+ +M+++ +  +  ++  V+  LCK+G++  A    E M    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  + YN LI   C      K  KA  +  +M++ GI  + + FN++ID  CK+  + 
Sbjct: 440 LSPGNIVYNSLIHSLCI---FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + K+F+ M   G+   ++TY++LI+G C+ GK+DEA  L   M++ G+KP+ VT N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+CK   +E A VLF ++   G+SP +ITYN ++    +  R   A  +   + + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++STYN ++ GL +    +    +   L    ++    T+NI++GAL K G++ +A  L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                 +      P++ TY+++ +   ++G LE+ + L   + E G   N      +  +
Sbjct: 677 FA---ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 517 MMEKGFIPDIEGHMYNI 533
           ++++G I     +++ I
Sbjct: 734 LLQRGDITRAGTYLFMI 750



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 179/351 (50%), Gaps = 11/351 (3%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           ILI   C  G +   +   A   ++++ G   + + F  L+ G C D+  S AM  V   
Sbjct: 96  ILIGSCCCAGRLDLGF---AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKK 342
           M   G    V +YN L+ GLC + +  EA+ L   M   G    P+VV+   +INGF K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++KA   + ++ ++G+ P+V+TY+++I A CK   M+ A  +  SM+  GV+P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  + D    
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS--- 329

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M K    P I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 13/306 (4%)

Query: 232 CKKGGIGKMYKADAV--FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           C    + +   A AV  +  M   G   + PN  T+  LI   C    +         + 
Sbjct: 59  CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVI 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKL 344
             G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177

Query: 345 VEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++A  L   + + G    P V++Y T+I+ + KEG ++ A+   + MLDRG+LP+V TY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +IA L +   ++    ++  +V NG+     TYN +V   C  G+ K+A+  L    K
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK---K 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTYN L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 355 LVEMHG 360



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 29/347 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +RYF     E R S   ++   L+HSL +  K+ K +  +   +  G    + TIF   +
Sbjct: 429 MRYFEQMIDE-RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIF--FN 483

Query: 107 TCSDSLCRNSIIID---MLMLAYVKNMKPHL--------GF-------EAFKRAGD---Y 145
           +  DS C+   +I+   +  L     +KP +        G+       EA K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++ N L+    K  + ED   +++EM+   +  ++ ++N +L GL +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G   ++ TYNI++ G CK     +  +   +F+++    +     TFN +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR---MFQNLCLTDLQLETRTFNIM 660

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K      A  +F  + ++G+   V TY+ +   L   G L+E   L   M  +G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             N    N+++    ++  + +A      I E+  S    T +  +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E       +++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 159/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A        KM KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRK---KMIKENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 250/527 (47%), Gaps = 62/527 (11%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           SLL   +LLH L  A+++P  R+ L   +     +   T+F  L         ++   D+
Sbjct: 42  SLLAHAQLLHILAHARRFPAARALLASLLS--AHSVAPTLFPDLVEVYKDFSFSAASFDL 99

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY------- 174
           L+ A+    +       F   G  G + ++ SCN+LL  LV+ G       V+       
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAG 159

Query: 175 ----------------------------KEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
                                       KEM+   +++NL +++ V++G C+ G+   A 
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVAR 219

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTL 265
            ++  ++  G+SP VVTY +L+ GYCK+   G+M +A+ V K++ EN  I+ +EV +  L
Sbjct: 220 KLLHSLQVKGLSPNVVTYTLLVKGYCKE---GRMEEAEKVVKEIKENEKIVIDEVAYGAL 276

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G+C+   +  A +V +EM   G+   +  YN++ING C  G++ E   L       G+
Sbjct: 277 INGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGV 336

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             +  + N L++G+C+K  + KA    D +   G + + +TYNTL++ +C  G ++DA  
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML RGV+P+  + + L+ G  + G  E   N+  E +  G+   +VT N ++  LC
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K+ +  +A    +E+F   KE   P + +TY  LI G+C+ G L  A  +  E+   G +
Sbjct: 457 KNRRMTEA----EELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFV 512

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           P+   +                  +R EM  KG  P+   +   I+G
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAG 559



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 225/464 (48%), Gaps = 50/464 (10%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           M V+NG FT  +  ++ L    +  C    I D L           L F   KR    G+
Sbjct: 365 MMVRNG-FTGTTLTYNTLL---NGFCSRGAIDDAL----------KLWFLMLKR----GV 406

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
             + +SC+ LL    K GK E    ++KE   R +  N+ + N V+NGLCK  ++ +A +
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           +   MK        +TY  LIDGYCK G +G   +A  +  +M   G +P+   FN+ I 
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG---RATQIRIEMENLGFVPSVEMFNSFIT 523

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G    +       +  EM + G++   VTY +LI G C +G L +A  L  EM+  GLKP
Sbjct: 524 GLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISE----QGLSPSV------------------- 364
           N+   + L++ F ++  V++A ++   +++    Q  S S                    
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQ 643

Query: 365 ---ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              I +N +I   CK GR+ DA  +   +  +G +PD  TY+ LI G S  G+++    +
Sbjct: 644 SAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGL 703

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E+++  +   +VTYN L+  LCK     +AVSL +   K++ +   PN +TYN LI G
Sbjct: 704 RDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFN---KLQSKGISPNAITYNTLIDG 760

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            C+ G   +A  L  +++++G+ P   TY I+   +  +G++ +
Sbjct: 761 HCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEE 804



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    + G+ ED   V  EM    +++N+  +N ++NG CK G++ +   +++  +  G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+    +YN L+DGYC+KG + K ++   +   MV NG     +T+NTL++GFC    I 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDM---MVRNGFTGTTLTYNTLLNGFCSRGAID 392

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A+K++  M   G+    ++ ++L++G    GK ++A+ L  E +A GL  NVVT N +I
Sbjct: 393 DALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVI 452

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG CK + + +A  LF  + E       +TY TLID YCK G +  A  +R  M + G +
Sbjct: 453 NGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFV 512

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V  +N  I GL        V +I  E+   G+    VTY  L+   CK+G    A  L
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             EM  +EK  K PN+   +VL+  F ++GK+++AN +L +L +  +I +
Sbjct: 573 YFEM--VEKGLK-PNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQD 619



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 200/435 (45%), Gaps = 60/435 (13%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L  F K GK      ++    T +  L RN + I+ ++    KN +     E F R  
Sbjct: 415 TLLDGFFKAGKTEQALNLWK--ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMK 472

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++      L+   L+    K G       +  EM+      +++ FN  + GL  A +  
Sbjct: 473 EWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSG 532

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------------------- 237
           K +DI  +M + G+SP  VTY  LI G+CK+G +                          
Sbjct: 533 KVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLV 592

Query: 238 ------GKMYKADAVFKDMVENGILPN--------------------------EVTFNTL 265
                 GK+ +A+ V + + +  ++ +                          ++ +N +
Sbjct: 593 SCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIV 652

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK   ++ A  +FE++   G      TY+SLI+G    G +D A  LRDEM+++ L
Sbjct: 653 ILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARL 712

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN+VT N+LI G CK   V +A  LF+ +  +G+SP+ ITYNTLID +CK+G   +AF 
Sbjct: 713 TPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFK 772

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           ++  M+  G+ P V TY  LI GL  +G +E    ++++++ N +    +TY  L+    
Sbjct: 773 LKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYA 832

Query: 446 KDGKSKKAVSLLDEM 460
           + G  K    L +EM
Sbjct: 833 RCGNMKAITKLYNEM 847



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/580 (23%), Positives = 251/580 (43%), Gaps = 116/580 (20%)

Query: 68  RLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +LLHSL V    P + ++  +   + K G+      +   +   ++ +  + +    L+ 
Sbjct: 220 KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKE-NEKIVIDEVAYGALIN 278

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +  +            D G++ ++   N ++    K G+  +VE + +  + R + L
Sbjct: 279 GYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNL 338

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  S+N +++G C+ G + KA +  + M   G +   +TYN L++G+C +G I    K  
Sbjct: 339 DEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK-- 396

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++  M++ G++PNE++ +TL+DGF K      A+ +++E  + G+A  VVT N++INGL
Sbjct: 397 -LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 305 CVD-----------------------------------GKLDEAVALRDEMMASGLKPNV 329
           C +                                   G L  A  +R EM   G  P+V
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              N+ I G    K   K   +  ++S +GLSP+ +TY  LI  +CKEG + DA  +   
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 390 MLDRGVLPDVSTYNCLIAGLSREG--------------------------NVEGVRNIMN 423
           M+++G+ P++   + L++   REG                          N+  V +I+ 
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----------------------- 460
            L     ++  + +NI++  LCK G+   A +L +++                       
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695

Query: 461 -----FKMEKE----KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
                F +  E    +  PNIVTYN LI G C+   +  A  L N+L  KG+ PN  TY 
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755

Query: 512 I----------------VREEMMEKGFIPDIEGHMYNISG 535
                            ++++M+++G  P +  +   I G
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHG 795



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 29/315 (9%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           +  L  N++    L+  + K    H     +    + GLK ++  C+ L+    +EGK +
Sbjct: 543 AKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVD 602

Query: 169 DVEYVYKEMKRRRI-------ELNLDS-------------------FNFVLNGLCKAGKL 202
           +   V +++    +        LN+                     +N V+ GLCK G++
Sbjct: 603 EANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRV 662

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A ++ ED+K  G  P   TY+ LI G    G I   +    +  +M+   + PN VT+
Sbjct: 663 ADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAF---GLRDEMLSARLTPNIVTY 719

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N+LI G CK  N+S A+ +F ++ S GI+   +TYN+LI+G C DG   EA  L+ +M+ 
Sbjct: 720 NSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIK 779

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G++P V T   LI+G C +  +E+A  L D + E  + P+ ITY TLI  Y + G M+ 
Sbjct: 780 EGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKA 839

Query: 383 AFAMRNSMLDRGVLP 397
              + N M   G+LP
Sbjct: 840 ITKLYNEMHICGLLP 854


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 231/454 (50%), Gaps = 27/454 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGK-------------FTSVSTIFHALSTCSDSLCR- 114
           +L SLV  K YP + S    F  NG              F  ++ I  A S  ++ L R 
Sbjct: 69  ILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128

Query: 115 ---NSIIIDMLM--LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
              N+I ++ L+  L +   +K  L F    +    G + + +S   L+  L K G+ + 
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFH--DQVVAQGFQLNQVSYRTLINGLCKTGETKA 186

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  + ++++   ++ ++  +N +++ LCK   L  A D+  +M   G+SP VVTYN L+ 
Sbjct: 187 VARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+C    +G + +A ++  +M    I P+  TFNTLID   K+  + AA  V   M    
Sbjct: 247 GFCI---MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC 303

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   VVTYNSLI+G     K+  A  +   M  SG+ PNV T   +I+G CK+K+V++A 
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAM 363

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF+++  + + P ++TY +LID  CK   +E A A+   M ++G+ PDV +Y  L+  L
Sbjct: 364 SLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 423

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G +E  +     L+  G    + TYN+++  LCK     +A+ L     KME +   
Sbjct: 424 CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS---KMEGKGCM 480

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           P+ +T+  +I    +K + + A  +L E++ +GL
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREMIARGL 514



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 196/368 (53%), Gaps = 8/368 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N +L +LV    +  V  ++K+ +      +L + N ++N  C    +  A  ++ ++  
Sbjct: 67  NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK 126

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
            G  P  +T N LI G C +G I K +Y  D V    V  G   N+V++ TLI+G CK  
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV----VAQGFQLNQVSYRTLINGLCKTG 182

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
              A  ++  ++  H +   VV YN++I+ LC +  L +A  L  EM+  G+ PNVVT N
Sbjct: 183 ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYN 242

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           AL+ GFC    +++A  L +++  + ++P V T+NTLIDA  KEG+M+ A  +   M+  
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            + PDV TYN LI G      V+  + +   +  +G+   + TY  ++  LCK+    +A
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +SL +E   M+ +   P+IVTY  LI G C+   LE A  L  ++ E+G+ P+  +Y I+
Sbjct: 363 MSLFEE---MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 514 REEMMEKG 521
            + + + G
Sbjct: 420 LDALCKGG 427



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 237/526 (45%), Gaps = 94/526 (17%)

Query: 70  LHSLVVAKKYP----KIRSFLHMFVKNGKFTSVSTIFHAL------------STCSDSLC 113
            H  VVA+ +       R+ ++   K G+  +V+ +   L            +T   SLC
Sbjct: 155 FHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC 214

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           +N ++ D                + +      G+  +V++ N L+      G  ++   +
Sbjct: 215 KNKLLGD--------------ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL 260

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
             EMK + I  ++ +FN +++ L K GK+  A  ++  M    + P VVTYN LIDGY  
Sbjct: 261 LNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY-- 318

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
              + K+  A  VF  M ++G+ PN  T+ T+IDG CK++ +  AM +FEEM    +   
Sbjct: 319 -FFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +VTY SLI+GLC +  L+ A+AL  +M   G++P+V +   L++  CK   +E A+  F 
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  +G   +V TYN +I+  CK     +A  +++ M  +G +PD  T+  +I  L  + 
Sbjct: 438 RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKD 497

Query: 414 NVEGVRNIMNELVNNGMRAG-----------------------LVTY------------- 437
             +    I+ E++  G++                         +VTY             
Sbjct: 498 ENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNEL 557

Query: 438 ----------------------NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                                  I++  LCK     +A+SL +E   M+ +  +PNIVTY
Sbjct: 558 KHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEE---MKHKNMFPNIVTY 614

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             LI   C+   LE A  LL E+ E G+ P+  +Y I+ + + + G
Sbjct: 615 TSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSG 660



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 29/399 (7%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V++ N L+       K ++ +YV+  M +  +  N+ ++  +++GLCK   +++A 
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAM 363

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + E+MK   + P +VTY  LIDG CK   + +   A A+ K M E GI P+  ++  L+
Sbjct: 364 SLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER---AIALCKKMKEQGIQPDVYSYTILL 420

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D  CK   +  A + F+ +   G    V TYN +INGLC      EA+ L+ +M   G  
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS-----------------------PS 363
           P+ +T   +I    +K   +KA  +  ++  +GL                        P 
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPD 540

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+TY TL+D Y     ++ A  +  SM   GV P+V  Y  +I GL ++  V+   ++  
Sbjct: 541 VVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFE 600

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+ +  M   +VTY  L+ ALCK+   ++A++LL EM   ++    P++ +Y +L+ G C
Sbjct: 601 EMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEM---KEHGIQPDVYSYTILLDGLC 657

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           + G+LE A  +   LL KG   N   Y  +  E+ + G 
Sbjct: 658 KSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 215/446 (48%), Gaps = 52/446 (11%)

Query: 90  VKNGKF-------TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           VKN K+       + V+      +T  D LC+  ++ + + L           FE  K  
Sbjct: 324 VKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL-----------FEEMKYK 372

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
               +   +++   L+  L K    E    + K+MK + I+ ++ S+  +L+ LCK G+L
Sbjct: 373 N---MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 429

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A +  + +   G    V TYN++I+G CK    G+   A  +   M   G +P+ +TF
Sbjct: 430 ENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE---AMDLKSKMEGKGCMPDAITF 486

Query: 263 NTLIDG-FCKDENISAAMKVFEEMGSHG-----------------------IAAGVVTYN 298
            T+I   F KDEN   A K+  EM + G                       I   VVTY 
Sbjct: 487 KTIICALFEKDEN-DKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYG 545

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           +L++G  +  +L  A  +   M   G+ PNV     +I+G CKKK V++A  LF+++  +
Sbjct: 546 TLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK 605

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            + P+++TY +LIDA CK   +E A A+   M + G+ PDV +Y  L+ GL + G +EG 
Sbjct: 606 NMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGA 665

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           + I   L+  G    +  Y  ++  LCK G   +A   LD   KME +   P+ VT++++
Sbjct: 666 KEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEA---LDLQXKMEDKGCMPDAVTFDII 722

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLI 504
           I    +K + + A  +L E++ +GL+
Sbjct: 723 IWALFEKDENDKAEKILXEMIARGLM 748



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 157/368 (42%), Gaps = 54/368 (14%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P + T  +    + +       + A A F  M+     P    FN ++     +++    
Sbjct: 23  PPIATATLHYQSHSQPHYHHHHHHAVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTV 82

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
           + +F++  S+G    + T N L+N  C    +  A ++   ++  G  PN +T N LI G
Sbjct: 83  ISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKG 142

Query: 339 FCKKKLVEKARVLFDDISEQGLS-----------------------------------PS 363
            C +  ++KA    D +  QG                                     P 
Sbjct: 143 LCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPD 202

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+ YNT+I + CK   + DA  + + M+ +G+ P+V TYN L+ G    G+++   +++N
Sbjct: 203 VVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+    +   + T+N L+ AL K+GK K A  +L  M K   +   P++VTYN LI G+ 
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK---PDVVTYNSLIDGYF 319

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
              K+++A  +   + + G+ PN  TY                  + EEM  K  IPDI 
Sbjct: 320 FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIV 379

Query: 528 GHMYNISG 535
            +   I G
Sbjct: 380 TYTSLIDG 387



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 132/250 (52%), Gaps = 10/250 (4%)

Query: 156 QLLRALVKEG-------KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           ++LR ++  G       + ++ + V   M +  I+ ++ ++  +++G     +L  A  +
Sbjct: 504 KILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYV 563

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
              M  +GV+P V  Y I+IDG CKK  + +   A ++F++M    + PN VT+ +LID 
Sbjct: 564 FYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE---AMSLFEEMKHKNMFPNIVTYTSLIDA 620

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+ ++  A+ + +EM  HGI   V +Y  L++GLC  G+L+ A  +   ++  G   N
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLN 680

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           V    A+IN  CK  L ++A  L   + ++G  P  +T++ +I A  ++   + A  +  
Sbjct: 681 VQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILX 740

Query: 389 SMLDRGVLPD 398
            M+ RG++ +
Sbjct: 741 EMIARGLMKE 750


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 205/397 (51%), Gaps = 27/397 (6%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L +S ++ N L+R        +    + +EM    ++ N  + + +L GLC+ G++ +A 
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 207 DIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNT 264
           +  +    L    P VV+Y  LI+G CK   +G++  A  +F+ MV   G  PN  T+N 
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCK---LGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+DG CK + + AA  V  E      A  VVTYN+L+  L   G++DEA+A   +M   G
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
             P +V+ NA+I G C+ + +  A  +F+++ ++   P+++TY+ +ID  CK  ++++A 
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 257

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            + + M+  G  PD+  Y  L+ G S  G ++    ++  +V+ G    +VTY +++  L
Sbjct: 258 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 317

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G+   A  +  E+      K  PN+VTY+ LI G+C+  ++++   ++ E+  +   
Sbjct: 318 CKVGRVDDAHEIFRELV---ANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR--- 371

Query: 505 PNQTTYQI----------------VREEMMEKGFIPD 525
           PN  TY                  +  EM E GF+PD
Sbjct: 372 PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPD 408



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 208/400 (52%), Gaps = 13/400 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYV 173
           +S+  ++L+  +         F   +     G++ +  + + +L+ L + G+  + +E+ 
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYC 232
              ++    + ++ S+  ++NGLCK G+++ A D+   M + G   P   TYN L+DG C
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K+    ++  A AV  +  +    P+ VT+NTL+    +   +  A+  F +M   G   
Sbjct: 144 KQD---RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            +V++N++I GLC   +L +A+ + +EM+     PN+VT + +I+G CK   +++A+ L 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           D +  +G  P ++ Y  L+  +   GR++ A  +   M+ +G +PDV TY  +I  L + 
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PN 471
           G V+    I  ELV N     +VTY+ L+G  C+        S +DE  K+ +E    PN
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR-------ASRVDEGGKVMREMACRPN 373

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +VTYN +I G     + E+A G+  E+ E G +P+  TY+
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 11/313 (3%)

Query: 135 GFEAFKR---AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
            F+ F++   AG  G + +  + N L+  L K+ + +    V  E ++R    ++ ++N 
Sbjct: 115 AFDLFRKMVAAG--GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNT 172

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++  L + G++++A      M   G  P +V++N +I G C+     ++  A  VF +M+
Sbjct: 173 LMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR---RLADALEVFNEMI 229

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +    PN VT++ +IDG CK + +  A ++ + M S G    +V Y  L+ G    G+LD
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            A+ L   M++ G  P+VVT   +I+  CK   V+ A  +F ++     SP+V+TY+ LI
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
             YC+  R+++   +   M  R   P+V TYN +I GLS     E    +  E+   G  
Sbjct: 350 GGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFV 406

Query: 432 AGLVTYNILVGAL 444
               TY  L  AL
Sbjct: 407 PDARTYRGLKRAL 419



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 162/338 (47%), Gaps = 12/338 (3%)

Query: 72  SLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLMLAYV 127
           SL +A   P + S+  +     K G+  +   +F  +       CR N+   + L+    
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG--CRPNAFTYNALVDGLC 143

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  +          A        V++ N L+ AL + G+ ++    + +M        L 
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           SFN ++ GLC+A +L  A ++  +M      P +VTY+++IDG CK     ++ +A  + 
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD---QLDEAQQLL 260

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV  G  P+ V +  L+ GF     + +A+ +   M S G    VVTY  +I+ LC  
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G++D+A  +  E++A+   PNVVT +ALI G+C+   V++   +   + E    P+V+TY
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTY 377

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
           NT+I       R E+A+ M   M + G +PD  TY  L
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           ++F+    +   + VTYNVLI+GFC    L+ A  LL E+  +G+  N  T  I+ + + 
Sbjct: 12  QLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLC 71

Query: 519 EKGFIPDIEGH 529
             G +     H
Sbjct: 72  RCGRVAQALEH 82


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 197/338 (58%), Gaps = 8/338 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+  ++NGLCK G+   A  ++  +    V P VV YN +ID  CK   + + +    ++
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD---LY 201

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +MV  GI P+ VT++ LI GF     +  A+ +F +M    I   V T+N L++G C D
Sbjct: 202 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 261

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           GK+ E   +   MM  G+KPNVVT  +L++G+C  K V KA  +F+ +++ G++P   +Y
Sbjct: 262 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSY 321

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N +I+ +CK  ++++A  +   M  + ++P+V TY  LI GL + G +     +++E+ +
Sbjct: 322 NIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHD 381

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLL----DEMFKMEKEKKWP-NIVTYNVLIKGF 482
            G+   ++TY+ ++ ALCK+ +  KA++LL    D++F+    K +  ++  Y V+I+GF
Sbjct: 382 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGF 441

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           C KG   +A  LL+++ + G IP+  TY+I+   + +K
Sbjct: 442 CVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK 479



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 197/361 (54%), Gaps = 14/361 (3%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           +S   L+  L K G+      + + +  + ++ N+  +N +++ +CK   +N+A D+  +
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S G+SP VVTY+ LI G+     +GK+  A  +F  M+   I P+  TFN L+DGFCK
Sbjct: 204 MVSEGISPDVVTYSALISGFFI---VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 260

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
           D  +     VF  M   GI   VVTY SL++G C+  ++++A ++ + M   G+ P+  +
Sbjct: 261 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS 320

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +INGFCK K V++A  LF  +  + + P+V+TY +LID  CK G++  A  + + M 
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMH 380

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN--------GMRAGLVTYNILVGA 443
           DRGV PD+ TY+ ++  L +   V+    ++ +L +         G    +  Y +++  
Sbjct: 381 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQG 440

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C  G   +A++LL    KME   + P+  TY ++I    +K + + A  LL E++ +GL
Sbjct: 441 FCVKGLFNEALALLS---KMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497

Query: 504 I 504
           +
Sbjct: 498 L 498



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 50/415 (12%)

Query: 25  KNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRS 84
           K  DPN + L           +++  C     L+ S+  L+ G          K  + R+
Sbjct: 124 KGYDPNVITL---------TTLIKGLC-----LKVSYGTLINGLC--------KVGQARA 161

Query: 85  FLHMFVK-NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
            L +  + +GK    + + +  +T  DS+C+  ++ +               F+ +    
Sbjct: 162 ALQLLRRVDGKLVQPNVVMY--NTIIDSMCKVKLVNE--------------AFDLYSEMV 205

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+   V++ + L+      GK +D   ++ +M    I+ ++ +FN +++G CK GK+ 
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +   M   G+ P VVTY  L+DGYC    + ++ KA+++F  M + G+ P+  ++N
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCL---VKQVNKANSIFNTMAQGGVNPDTQSYN 322

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I+GFCK + +  AM +F++M    I   VVTY SLI+GLC  GK+  A+ L DEM   
Sbjct: 323 IMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDR 382

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVL--------FDDISEQGLSPSVITYNTLIDAYC 375
           G+ P+++T +++++  CK   V+KA  L        F+D+  +G +  V  Y  +I  +C
Sbjct: 383 GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFC 442

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            +G   +A A+ + M D G +PD  TY  +I  L ++   +    ++ E++  G+
Sbjct: 443 VKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 176/334 (52%), Gaps = 11/334 (3%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +  +R     ++ +V+  N ++ ++ K     +   +Y EM    I  ++ +++ +++
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALIS 221

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G    GKL  A D+   M    + P V T+NIL+DG+CK G   KM +   VF  M++ G
Sbjct: 222 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG---KMKEGKTVFAMMMKQG 278

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I PN VT+ +L+DG+C  + ++ A  +F  M   G+     +YN +ING C   K+DEA+
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAM 338

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L  +M    + PNVVT  +LI+G CK   +  A  L D++ ++G+ P +ITY++++DA 
Sbjct: 339 NLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 398

Query: 375 CKEGRMEDAFAMRNSMLD--------RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           CK  +++ A A+   + D        +G   DV  Y  +I G   +G       +++++ 
Sbjct: 399 CKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKME 458

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +NG      TY I++ +L K  ++  A  LL EM
Sbjct: 459 DNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 143/258 (55%), Gaps = 11/258 (4%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K  V + N L+    K+GK ++ + V+  M ++ I+ N+ ++  +++G C   ++NKA+
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            I   M   GV+P   +YNI+I+G+CK   I K+ +A  +FK M    I+PN VT+ +LI
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCK---IKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR--------D 318
           DG CK   IS A+K+ +EM   G+   ++TY+S+++ LC + ++D+A+AL         +
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFE 420

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           ++   G   +V     +I GFC K L  +A  L   + + G  P   TY  +I +  K+ 
Sbjct: 421 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480

Query: 379 RMEDAFAMRNSMLDRGVL 396
             + A  +   M+ RG+L
Sbjct: 481 ENDMAEKLLREMIARGLL 498



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 32/136 (23%)

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK--- 485
           G+ + LVT NIL+    + G++  + S+   + K   +   PN++T   LIKG C K   
Sbjct: 90  GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYD---PNVITLTTLIKGLCLKVSY 146

Query: 486 ----------GKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMME 519
                     G+   A  LL  +  K + PN   Y  + +                EM+ 
Sbjct: 147 GTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 206

Query: 520 KGFIPDIEGHMYNISG 535
           +G  PD+  +   ISG
Sbjct: 207 EGISPDVVTYSALISG 222


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 193/351 (54%), Gaps = 7/351 (1%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G     E VYKEM   +I  +   +N +LNG  KAG++    D+ E M   G S  V 
Sbjct: 2   ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNVA 60

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           ++N ++ G    G + +++   ++++ M E+G + +  T+  L+ GFCK+   + ++ V 
Sbjct: 61  SFNTMMRGLFNNGEVDEVF---SIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVL 117

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E     G A     Y+++I+GLC  GKLD+AV++ + M+ SG KPN    NALING    
Sbjct: 118 EIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGA 177

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              E A  +F ++  +  SP+++TYNTLI+  CK  R  +A+ +   ML++G  P V TY
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + LI GL ++  VE    + N++++ G +  +  +NIL+  LC  GK++ A  L    F 
Sbjct: 238 SLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELY---FD 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M      PN+VTYN L++GF + G   +A  +   +L  GL+P+  +Y I 
Sbjct: 295 MNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNIT 345



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 179/345 (51%), Gaps = 4/345 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           ++++ + ++  + K  +    F+ ++  G  G ++ V S N ++R L   G+ ++V  ++
Sbjct: 24  DAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRN-VASFNTMMRGLFNNGEVDEVFSIW 82

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + MK      +  ++  +++G CK G  NK+  ++E  K  G +     Y+ +I G CK 
Sbjct: 83  ELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCK- 141

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +GK+ KA +V   M+E+G  PN   +N LI+G         A++VF+E+G+   +  +
Sbjct: 142 --MGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTI 199

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYN+LINGLC   +  EA  L  EM+  G  P+V+T + LI G C+   VE A  L++ 
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQ 259

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  P V  +N LI   C  G+ E A  +   M      P++ TYN L+ G  + G+
Sbjct: 260 VISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGD 319

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
                 I   ++ NG+   +++YNI +  LC   +   A+  L++
Sbjct: 320 TRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLND 364



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 151/296 (51%), Gaps = 3/296 (1%)

Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYV 173
           RN    + +M     N +    F  ++   + G      +   L+    K G      +V
Sbjct: 57  RNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHV 116

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
            +  K+    L+  +++ +++GLCK GKL+KA  ++  M   G  P    YN LI+G   
Sbjct: 117 LEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLL- 175

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             G  K   A  VFK++      P  VT+NTLI+G CK E  + A  + +EM   G    
Sbjct: 176 --GASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPS 233

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           V+TY+ LI GLC D K++ A+ L +++++ G KP+V   N LI+G C     E A  L+ 
Sbjct: 234 VITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYF 293

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           D++    +P+++TYNTL++ + K G   +A  +   +L  G+LPD+ +YN  + GL
Sbjct: 294 DMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGL 349



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 20/282 (7%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   I+AA +V++EM    I+   V YN+++NG    G++     L + M   G + NV
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NV 59

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            + N ++ G      V++   +++ + E G      TY  L+  +CK G    +  +   
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
               G   D   Y+ +I+GL + G ++   +++N ++ +G +     YN L+  L    K
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            + A+ +  E+         P IVTYN LI G C+  +  +A  L+ E+LEKG  P+  T
Sbjct: 180 FEDAIRVFKELGTRHCS---PTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVIT 236

Query: 510 YQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           Y +                +  +++ KGF PD++ H   I G
Sbjct: 237 YSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHG 278


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + ++ + + V      S S +F AJ     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++J  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLK---NXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYVPSVVT 418



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   VJ  L K          
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL PN
Sbjct: 181 YIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTD 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++ +E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 149/287 (51%), Gaps = 10/287 (3%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           J  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 JEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
           G C+KG L+ A  L +E+  KGL P++ TY  +     +E  +E  F
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   +J  L +    + V     
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L N +   G+ P+  TY +                + +EM++ G +P
Sbjct: 180 GYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 240 NGVTFTTLIDGHCKN 254


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 253/526 (48%), Gaps = 72/526 (13%)

Query: 73  LVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
           L+ A+ + +  S L H+ V     T++ T    + +  DS   N ++ ++L+ AYVK  K
Sbjct: 43  LIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRIISRFDS--TNHVVFELLIKAYVKERK 100

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
                 A     D G K+S ++CN +L+ALV+EG+ + V    +E   R+  L++ + N 
Sbjct: 101 VLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNI 160

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVS--------------------------------- 218
           +LN LC  G+  KA D+++ MKS  +S                                 
Sbjct: 161 LLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSI 220

Query: 219 -PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
              + TYNI+ID  C+   I +  +A  + K M ++ + P+E T+NTLI+GF  +  I+ 
Sbjct: 221 QADIYTYNIMIDKLCR---IKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINH 277

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  VF  M    +   V TY ++I+G C + ++D+A+++  EM  +G+ P+ +T +AL+N
Sbjct: 278 ARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLN 337

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           G+CK  ++  A  L  D+  +G++ +      LID +C+ G +  A  +  SML+ G+ P
Sbjct: 338 GYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDP 397

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV TY+ LI G+ R   +   + I++ +  +G+    V Y  L+   CK G  K A+   
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457

Query: 458 DEMFK--------------------------------MEKEKKWPNIVTYNVLIKGFCQK 485
            ++++                                M +     N V++N +I  +C +
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           GK+ +A  + ++++  G  PN  TYQ +   + + G +   +  M+
Sbjct: 518 GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 563



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 62/487 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + LH +VK G+F +   +   +    DS+  +    ++++    +  +    F   KR  
Sbjct: 194 TILHWYVKKGRFKAALCVLEDME--RDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMR 251

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              L     + N L+     EGK      V+  M R+ +  ++ ++  +++G C+  +++
Sbjct: 252 KDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRID 311

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  ++ +M+  GV P  +TY+ L++GYCK   +G    A  +  D+   GI  N+    
Sbjct: 312 KALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGP---ALDLMVDLKSRGITINKTMCT 368

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDGFC+   IS A ++ + M   GI   VVTY++LING+C   K+ E   +   M  S
Sbjct: 369 ILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKS 428

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL--SPSV----------------- 364
           G+ PN V    LI  +CK   V+ A   F DI  +GL  +P +                 
Sbjct: 429 GILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEA 488

Query: 365 ----------------ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
                           +++N +ID+YC  G++ +AF++ + M+  G  P+V TY  L+ G
Sbjct: 489 EHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRG 548

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L + G++   +  M  L++        T+N L+  +CK G   +A+ + +   KM K   
Sbjct: 549 LCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICE---KMVKNNC 605

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            P+I TY +L+ GFC+KGK+               +P     Q+    M+EKG +PD   
Sbjct: 606 LPDIHTYTILLSGFCRKGKI---------------LPALVMLQM----MLEKGVVPDTVA 646

Query: 529 HMYNISG 535
           +   ++G
Sbjct: 647 YTCLLNG 653



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 229/513 (44%), Gaps = 83/513 (16%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + ++ F   GK      +F+ +   T   S+   + +ID     Y +N +          
Sbjct: 264 TLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMID----GYCRNRRIDKALSVLSE 319

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G+  S L+ + LL    K         +  ++K R I +N      +++G C+ G+
Sbjct: 320 MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGE 379

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           ++KA  I++ M   G+ P VVTY+ LI+G C+   + KM++   +   M ++GILPN+V 
Sbjct: 380 ISKAKQILKSMLEDGIDPDVVTYSALINGMCR---MAKMHETKEILSRMQKSGILPNDVL 436

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL--------------------- 300
           + TLI  +CK   +  A+K F ++   G+ A  V +N+L                     
Sbjct: 437 YTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMS 496

Query: 301 --------------INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLV 345
                         I+  C  GK+ EA ++ D+M+  G  PNV T   L+ G C+   LV
Sbjct: 497 RMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLV 556

Query: 346 EKARVLFD------------------------------DISEQGLS----PSVITYNTLI 371
           +  + +F                               DI E+ +     P + TY  L+
Sbjct: 557 QAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILL 616

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV-NNGM 430
             +C++G++  A  M   ML++GV+PD   Y CL+ GL  EG V+    +  E++   G+
Sbjct: 617 SGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL 676

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            A  + YN L+    K G       ++ +M++ E    +PN  +YN+L+ G+ ++G+   
Sbjct: 677 YADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEV---YPNSASYNILMHGYVKRGQFSK 733

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +  L   ++ KG+ P+  TY+++   + E G I
Sbjct: 734 SLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 766



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 193/368 (52%), Gaps = 11/368 (2%)

Query: 157  LLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
            LL  L+ EG+ +   YV++E+  +  +  +  ++N ++NG  K G +N    +M DM   
Sbjct: 650  LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQN 709

Query: 216  GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
             V P   +YNIL+ GY K+G   +  K+  ++K MV  GI P+ VT+  LI G  +   I
Sbjct: 710  EVYPNSASYNILMHGYVKRG---QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 766

Query: 276  SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
              A+K  E+M   GI    + ++ LI       K+  A+ L + M    L P+  T +A+
Sbjct: 767  DIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAM 826

Query: 336  INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
            ING  +K  ++++  +  ++ + GL P+   Y  L++A C+ G ++ AF ++  M   G+
Sbjct: 827  INGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 886

Query: 396  LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            +P     + +I GL R G +E    + + ++ +GM   + T+  L+ +LCK+ K   A+ 
Sbjct: 887  VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALH 946

Query: 456  L--LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            L  L E+ +++      ++V+YNVLI G C+   + DA  L  E+  KGL PN TTY  +
Sbjct: 947  LKRLMELCRLK-----VDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITL 1001

Query: 514  REEMMEKG 521
               M   G
Sbjct: 1002 TGAMYSTG 1009



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 221/482 (45%), Gaps = 52/482 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L  F + G  T        +S  + S   NS+  + ++ +Y    K    F  +    
Sbjct: 474 ALLRAFYREGMITEAEHFRQYMSRMNISF--NSVSFNCIIDSYCHRGKIVEAFSVYDDMV 531

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            YG   +V +   LLR L + G     +     +      ++  +FN +L G+CK G L+
Sbjct: 532 RYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLD 591

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A DI E M      P + TY IL+ G+C+KG   K+  A  + + M+E G++P+ V + 
Sbjct: 592 EALDICEKMVKNNCLPDIHTYTILLSGFCRKG---KILPALVMLQMMLEKGVVPDTVAYT 648

Query: 264 TLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
            L++G   +  + AA  VF+E+    G+ A  + YNSL+NG    G ++    +  +M  
Sbjct: 649 CLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQ 708

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY--------------- 367
           + + PN  + N L++G+ K+    K+  L+  +  +G+ P  +TY               
Sbjct: 709 NEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDI 768

Query: 368 --------------------NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
                               + LI ++ ++ +M +A  + N M    + P   T++ +I 
Sbjct: 769 AVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMIN 828

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL R+  ++    +++E++  G++     Y  LV A C+ G+       +D  F++++E 
Sbjct: 829 GLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGE-------IDRAFRLKEEM 881

Query: 468 KWPNIVTYNV----LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           K   IV   V    +I+G C+ GKLE+A  + + ++  G++P   T+  +   + ++  I
Sbjct: 882 KAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKI 941

Query: 524 PD 525
            D
Sbjct: 942 AD 943



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 189/385 (49%), Gaps = 22/385 (5%)

Query: 85   FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN---------MKPHLG 135
             L+  +  G+  + S +F  +  C + L  + I  + LM  Y+K          M     
Sbjct: 650  LLNGLINEGQVKAASYVFQEI-ICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQ 708

Query: 136  FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
             E +  +  Y         N L+   VK G+F    Y+YK M R+ I  +  ++  ++ G
Sbjct: 709  NEVYPNSASY---------NILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILG 759

Query: 196  LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
            L + G ++ A   +E M   G+ P  + ++ILI  + +K    KM+ A  +F  M    +
Sbjct: 760  LSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKS---KMHNALRLFNCMKCLHL 816

Query: 256  LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             P+  TF+ +I+G  +   +  + +V  EM   G+      Y +L+N  C  G++D A  
Sbjct: 817  SPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 876

Query: 316  LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
            L++EM A G+ P  V  +++I G C+   +E+A ++F ++   G+ P+V T+ TL+ + C
Sbjct: 877  LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLC 936

Query: 376  KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
            KE ++ DA  ++  M    +  DV +YN LI GL ++ ++    ++  E+ + G+   + 
Sbjct: 937  KESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVT 996

Query: 436  TYNILVGALCKDGKSKKAVSLLDEM 460
            TY  L GA+   G+ +    LL+++
Sbjct: 997  TYITLTGAMYSTGRMQNGEELLEDI 1021



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 169/333 (50%), Gaps = 8/333 (2%)

Query: 68   RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
            R++  +   + YP   S+   +H +VK G+F+    ++  +      +  +++   +L+L
Sbjct: 701  RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMV--RKGIRPDNVTYRLLIL 758

Query: 125  AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
               +     +  +  ++    G+    L  + L+ +  ++ K  +   ++  MK   +  
Sbjct: 759  GLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSP 818

Query: 185  NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            +  +F+ ++NGL +   L+++ +++ +M  +G+ P    Y  L++  C+ G I + ++  
Sbjct: 819  SSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 878

Query: 245  AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
               ++M   GI+P EV  +++I G C+   +  A+ VF  M   G+   V T+ +L++ L
Sbjct: 879  ---EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSL 935

Query: 305  CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            C + K+ +A+ L+  M    LK +VV+ N LI G CK K +  A  L+ ++  +GL P+V
Sbjct: 936  CKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNV 995

Query: 365  ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
             TY TL  A    GRM++   +   + +RG++P
Sbjct: 996  TTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 10/279 (3%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            + ++ D+L+ ++ +  K H     F       L  S  + + ++  L+++   +    V 
Sbjct: 784  DKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVL 843

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             EM +  ++ N   +  ++N  C+ G++++A  + E+MK++G+ P  V  + +I G C+ 
Sbjct: 844  HEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR- 902

Query: 235  GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               GK+ +A  VF +M+ +G++P   TF TL+   CK+  I+ A+ +   M    +   V
Sbjct: 903  --CGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDV 960

Query: 295  VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            V+YN LI GLC D  + +A+ L  EM + GL PNV T   L         ++    L +D
Sbjct: 961  VSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLED 1020

Query: 355  ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            I E+GL P+      L      E RMEDA   R +M+ R
Sbjct: 1021 IEERGLIPAFKQLENL------ERRMEDAIR-RLNMIRR 1052


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 198/364 (54%), Gaps = 15/364 (4%)

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
           A  K   ++    +  EM+ +    ++ ++N V+NG+C+ G+++ A + ++++ S G  P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             V+YNI++ G C      +   A+ +  +M + G  PN VTFN LI   C+   +  A+
Sbjct: 61  NTVSYNIVLKGLCTAE---RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 117

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
           +V E++  +G     ++YN L++  C   K+D+A+A  D M++ G  P++V+ N L+   
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 177

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C+   V+ A  L   + ++G +P +I+YNT+ID   K G+ ++A  + N M+ +G+ PD+
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
            TY+ + AGL RE  +E       ++ + G+R   V YN ++  LCK  ++  A+ L   
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M         PN  TY +LI+G   +G +++A  LL+EL  +G         +VR+ ++ 
Sbjct: 298 MI---GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG---------VVRKSLIN 345

Query: 520 KGFI 523
           KG I
Sbjct: 346 KGAI 349



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 3/317 (0%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G    +++ N ++  + +EG+ +D     K +     E N  S+N VL GLC A +  
Sbjct: 20  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 79

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A ++M +M   G  P VVT+N+LI   C+KG +     A  V + + + G  PN +++N
Sbjct: 80  DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYN 136

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+  FCK + +  AM   + M S G    +V+YN+L+  LC  G++D AV L  ++   
Sbjct: 137 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 196

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P +++ N +I+G  K    ++A  L +++  +GL P +ITY+T+    C+E R+EDA
Sbjct: 197 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 256

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 + D G+ P+   YN +I GL +        ++   ++ NG      TY IL+  
Sbjct: 257 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 316

Query: 444 LCKDGKSKKAVSLLDEM 460
           L  +G  K+A  LLDE+
Sbjct: 317 LAYEGLIKEARDLLDEL 333



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 166/296 (56%), Gaps = 3/296 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  K    YG + + +S N +L+ L    ++ED E +  EM ++    N+ +FN +++
Sbjct: 46  AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 105

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ G +  A +++E +   G +P  ++YN L+  +CK+    KM KA A    MV  G
Sbjct: 106 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ---KKMDKAMAFLDLMVSRG 162

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ V++NTL+   C+   +  A+++  ++   G A  +++YN++I+GL   GK  EA+
Sbjct: 163 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 222

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L +EM++ GL+P+++T + +  G C++  +E A   F  + + G+ P+ + YN +I   
Sbjct: 223 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 282

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           CK      A  +   M+  G +P+ STY  LI GL+ EG ++  R++++EL + G+
Sbjct: 283 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 338



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 142/257 (55%), Gaps = 5/257 (1%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK      AMK+ +EM   G    +VTYN ++NG+C +G++D+A+     + + G +PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ N ++ G C  +  E A  L  ++ ++G  P+V+T+N LI   C++G +E A  +   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +   G  P+  +YN L+    ++  ++     ++ +V+ G    +V+YN L+ ALC+ G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 450 SKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
              AV LL ++    K+K   P +++YN +I G  + GK ++A  LLNE++ KGL P+  
Sbjct: 183 VDVAVELLHQL----KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 238

Query: 509 TYQIVREEMMEKGFIPD 525
           TY  +   +  +  I D
Sbjct: 239 TYSTIAAGLCREDRIED 255



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 3/246 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +  +ML+    +        E  ++   YG   + LS N LL A  K+ K +      
Sbjct: 96  NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 155

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             M  R    ++ S+N +L  LC++G+++ A +++  +K  G +P +++YN +IDG  K 
Sbjct: 156 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 215

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK  +A  +  +MV  G+ P+ +T++T+  G C+++ I  A++ F ++   GI    
Sbjct: 216 ---GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V YN++I GLC   +   A+ L   M+ +G  PN  T   LI G   + L+++AR L D+
Sbjct: 273 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 332

Query: 355 ISEQGL 360
           +  +G+
Sbjct: 333 LCSRGV 338



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 26/234 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           LLH+    KK  K  +FL + V  G +  + + ++ L T   +LCR+  +          
Sbjct: 138 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS-YNTLLT---ALCRSGEV---------- 183

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
                +  E   +  D G    ++S N ++  L K GK ++   +  EM  + ++ ++ +
Sbjct: 184 ----DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ +  GLC+  ++  A      ++ +G+ P  V YN +I G CK+    + + A  +F 
Sbjct: 240 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR---RETHSAIDLFA 296

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
            M+ NG +PNE T+  LI+G   +  I  A  + +E+ S G     V   SLIN
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG-----VVRKSLIN 345


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 199/399 (49%), Gaps = 41/399 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++S N ++    K G  +     +  M +  +  +  S+N +L+GLC AG +++A    
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           +DM+  GV P VVTYN L  G+     +G M  A  V + M+  G+ P+ VT+ TLI G 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLL---LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  NI  A+K+ +E  S G    V+ YN L++ LC  G+++EA+ L DEM    L+P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 330 VTSNALINGFCKKKLVEK-----------------------------------ARVLFDD 354
           +  + LI+G CK+  V++                                   AR  FD 
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            +   L   V+ YN +ID Y +   + +A  +   M++RG+ P V T+N LI G  R G+
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   R ++  +   G+   +VTY  L+ A C+ G  ++    L E   ME     P  VT
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE---MEANAVVPTHVT 623

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           Y VLIKG C++ K+ ++  LL  +  KGL+P+  TY  +
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 199/384 (51%), Gaps = 6/384 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   +++   L+    + G  E+   + +E   R  +LN+  +N +L+ LCK G++ +A
Sbjct: 371 GLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA 430

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M++L + P  + Y+ILI G CK+G + + Y+   +++ M      P+      +
Sbjct: 431 LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ---LYEQMRLKRKFPHHFAQRAV 487

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K+ NIS A   F+      +   VV YN +I+G      + EA+ L  +M+  G+
Sbjct: 488 LLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LINGFC++  + +AR + + I  +GL PSV+TY TL++AYC+ G M++ F 
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFH 607

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M    V+P   TY  LI GL R+  +     ++  +   G+    VTYN ++   C
Sbjct: 608 FLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  +  KA+ L + M     +   P  VTY VLI   C  G L+D + ++  + ++ +  
Sbjct: 668 KGKEITKALQLYNMMLLHNCD---PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITL 724

Query: 506 NQTTYQIVREEMMEKGFIPDIEGH 529
            + TY  + +    KG +    G+
Sbjct: 725 KKXTYMTIIKAHCAKGQVSKALGY 748



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 247/552 (44%), Gaps = 55/552 (9%)

Query: 3   CSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHS 62
           C+  + +  ++E + +    +L+   P+  +               +F +   E    HS
Sbjct: 71  CNFRTVVSTLSETVVDGVLDRLRTLKPDVAV--------------AFFYFLINEYGFRHS 116

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           +     + H L    ++ ++ S +   + +    S S I   L     +   N ++ DML
Sbjct: 117 IFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDML 176

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-VYKEMKRRR 181
             AY ++   H       +  D   ++SV + N LL  +    +  D+ + VY E+K   
Sbjct: 177 AFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM----RHTDIMWDVYNEIKVSG 232

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---- 237
              +  + + +++GLC+  KL  A   + D   + V P +V+ N ++  +CK G I    
Sbjct: 233 APQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVAR 291

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       G M +A     DM ++G+ P+ VT+NTL  GF
Sbjct: 292 SXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGF 351

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                +S A KV ++M   G+   +VTY +LI G C  G ++EA+ LR E ++ G K NV
Sbjct: 352 LLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNV 411

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +  N L++  CK   +E+A  LFD++    L P  I Y+ LI   CKEG ++ A+ +   
Sbjct: 412 IFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQ 471

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +   P       ++ GL + GN+   RN  +      +   +V YNI++    +   
Sbjct: 472 MRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDG 531

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+ L    +KM +    P++VT+N LI GFC++G L +A  +L  +  KGL+P+  T
Sbjct: 532 IAEAMQL---YYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588

Query: 510 YQIVREEMMEKG 521
           Y  +     E G
Sbjct: 589 YTTLMNAYCEVG 600



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 195/411 (47%), Gaps = 41/411 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V+  N LL  L K G+ E+   ++ EM+  R+E +   ++ +++GLCK G + +A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 206 SDIMEDMK-----------------------------------SLGVSPKVVTYNILIDG 230
             + E M+                                    + +   VV YNI+IDG
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           Y +  GI +   A  ++  M+E GI P+ VTFNTLI+GFC+  ++  A K+ E +   G+
Sbjct: 526 YVRLDGIAE---AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGL 582

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              VVTY +L+N  C  G + E      EM A+ + P  VT   LI G C++  + ++  
Sbjct: 583 VPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQ 642

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +  +GL P  +TYNT+I  +CK   +  A  + N ML     P   TY  LI  L 
Sbjct: 643 LLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALC 702

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G+++ V  ++  + +  +     TY  ++ A C  G+  KA+   ++M     +    
Sbjct: 703 IFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQML---AKGFVI 759

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +I  Y+ +I   C++G + +A      +L +G+ P+    + V     ++G
Sbjct: 760 SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 174/369 (47%), Gaps = 16/369 (4%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L   + + +K+P     R+ L    KNG  +     F   +     L  + ++ ++++ 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD--LMEDVVLYNIMID 524

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            YV+        + + +  + G+  SV++ N L+    + G   +   + + ++ + +  
Sbjct: 525 GYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVP 584

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ ++  ++N  C+ G + +    + +M++  V P  VTY +LI G C++    KM+++ 
Sbjct: 585 SVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN---KMHESL 641

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M   G+LP+ VT+NT+I  FCK + I+ A++++  M  H      VTY  LIN L
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVV----TSNALINGFCKKKLVEKARVLFDDISEQGL 360
           C+ G L +     D M+ S    N+     T   +I   C K  V KA   F+ +  +G 
Sbjct: 702 CIFGDLKDV----DRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             S+  Y+ +I+  CK G + +A      ML  GV PD      ++    ++GN   V  
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 421 IMNELVNNG 429
            +  +V +G
Sbjct: 818 FLAMVVKSG 826


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 199/399 (49%), Gaps = 41/399 (10%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           S++S N ++    K G  +     +  M +  +  +  S+N +L+GLC AG +++A    
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           +DM+  GV P VVTYN L  G+     +G M  A  V + M+  G+ P+ VT+ TLI G 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLL---LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  NI  A+K+ +E  S G    V+ YN L++ LC  G+++EA+ L DEM    L+P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 330 VTSNALINGFCKKKLVEK-----------------------------------ARVLFDD 354
           +  + LI+G CK+  V++                                   AR  FD 
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            +   L   V+ YN +ID Y +   + +A  +   M++RG+ P V T+N LI G  R G+
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   R ++  +   G+   +VTY  L+ A C+ G  ++    L E   ME     P  VT
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE---MEANAVVPTHVT 623

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           Y VLIKG C++ K+ ++  LL  +  KGL+P+  TY  +
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 199/384 (51%), Gaps = 6/384 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   +++   L+    + G  E+   + +E   R  +LN+  +N +L+ LCK G++ +A
Sbjct: 371 GLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA 430

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + ++M++L + P  + Y+ILI G CK+G + + Y+   +++ M      P+      +
Sbjct: 431 LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ---LYEQMRLKRKFPHHFAQRAV 487

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K+ NIS A   F+      +   VV YN +I+G      + EA+ L  +M+  G+
Sbjct: 488 LLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+VVT N LINGFC++  + +AR + + I  +GL PSV+TY TL++AYC+ G M++ F 
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFH 607

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             + M    V+P   TY  LI GL R+  +     ++  +   G+    VTYN ++   C
Sbjct: 608 FLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  +  KA+ L + M     +   P  VTY VLI   C  G L+D + ++  + ++ +  
Sbjct: 668 KGKEITKALQLYNMMLLHNCD---PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITL 724

Query: 506 NQTTYQIVREEMMEKGFIPDIEGH 529
            + TY  + +    KG +    G+
Sbjct: 725 KKVTYMTIIKAHCAKGQVSKALGY 748



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 247/552 (44%), Gaps = 55/552 (9%)

Query: 3   CSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHS 62
           C+  + +  ++E + +    +L+   P+  +               +F +   E    HS
Sbjct: 71  CNFRTVVSTLSETVVDGVLDRLRTLKPDVAV--------------AFFYFLINEYGFRHS 116

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           +     + H L    ++ ++ S +   + +    S S I   L     +   N ++ DML
Sbjct: 117 IFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDML 176

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-VYKEMKRRR 181
             AY ++   H       +  D   ++SV + N LL  +    +  D+ + VY E+K   
Sbjct: 177 AFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM----RHTDIMWDVYNEIKVSG 232

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---- 237
              +  + + +++GLC+  KL  A   + D   + V P +V+ N ++  +CK G I    
Sbjct: 233 APQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVAR 291

Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                                       G M +A     DM ++G+ P+ VT+NTL  GF
Sbjct: 292 SFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGF 351

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                +S A KV ++M   G+   +VTY +LI G C  G ++EA+ LR E ++ G K NV
Sbjct: 352 LLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNV 411

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           +  N L++  CK   +E+A  LFD++    L P  I Y+ LI   CKEG ++ A+ +   
Sbjct: 412 IFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQ 471

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +   P       ++ GL + GN+   RN  +      +   +V YNI++    +   
Sbjct: 472 MRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDG 531

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+ L    +KM +    P++VT+N LI GFC++G L +A  +L  +  KGL+P+  T
Sbjct: 532 IAEAMQL---YYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588

Query: 510 YQIVREEMMEKG 521
           Y  +     E G
Sbjct: 589 YTTLMNAYCEVG 600



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 196/411 (47%), Gaps = 41/411 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K +V+  N LL  L K G+ E+   ++ EM+  R+E +   ++ +++GLCK G + +A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 206 SDIMEDMK-----------------------------------SLGVSPKVVTYNILIDG 230
             + E M+                                    + +   VV YNI+IDG
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           Y +  GI +   A  ++  M+E GI P+ VTFNTLI+GFC+  ++  A K+ E +   G+
Sbjct: 526 YVRLDGIAE---AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGL 582

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              VVTY +L+N  C  G + E      EM A+ + P  VT   LI G C++  + ++  
Sbjct: 583 VPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQ 642

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + +  +GL P  +TYNT+I  +CK   +  A  + N ML     P   TY  LI  L 
Sbjct: 643 LLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALC 702

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G+++ V  ++  + +  +    VTY  ++ A C  G+  KA+   ++M     +    
Sbjct: 703 IFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQML---AKGFVI 759

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +I  Y+ +I   C++G + +A      +L +G+ P+    + V     ++G
Sbjct: 760 SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 175/369 (47%), Gaps = 16/369 (4%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L   + + +K+P     R+ L    KNG  +     F   +     L  + ++ ++++ 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD--LMEDVVLYNIMID 524

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            YV+        + + +  + G+  SV++ N L+    + G   +   + + ++ + +  
Sbjct: 525 GYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVP 584

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ ++  ++N  C+ G + +    + +M++  V P  VTY +LI G C++    KM+++ 
Sbjct: 585 SVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN---KMHESL 641

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + M   G+LP+ VT+NT+I  FCK + I+ A++++  M  H      VTY  LIN L
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 305 CVDGKLDEAVALRDEMMASGLKPNV----VTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           C+ G L +     D M+ S    N+    VT   +I   C K  V KA   F+ +  +G 
Sbjct: 702 CIFGDLKDV----DRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             S+  Y+ +I+  CK G + +A      ML  GV PD      ++    ++GN   V  
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 421 IMNELVNNG 429
            +  +V +G
Sbjct: 818 FLAMVVKSG 826


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 224/424 (52%), Gaps = 18/424 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +  + ++G+      +F A+  + C  +L   + IID      V   K    FE  ++
Sbjct: 239 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQK 298

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
            G   ++   ++ N L+    +   +ED + V+ EM+RR IE ++ ++N +++ +CK G+
Sbjct: 299 EG---VEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +  A+ IM  M+   +SP VVTY+ +IDGY   G +G   +A  ++ DM E+G+ P+ V+
Sbjct: 356 MELAASIMSSMRLKNISPNVVTYSTMIDGY---GKLGCFEEAIGLYHDMKESGVRPDRVS 412

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NTLID + K      A+   ++M   G+ A VVTYN+LI+     GK  +A  L D+M 
Sbjct: 413 YNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMK 472

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A GL PNV+T +ALI+ + K  + + A  +F +    GL P V+ Y++LID+ CK G +E
Sbjct: 473 AEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVE 532

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL-VNNGMRAGLVTYNIL 440
           DA  +   M   G+ P++ TYN LI    R G V+ V      + +N   + G  +  I+
Sbjct: 533 DAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEII 592

Query: 441 VGALCKDGKSK------KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
              L     +        AVS+  EM +   +   PN+VT++ ++    +   L++A+ L
Sbjct: 593 CKTLTSQQNANDHTGVLAAVSVFHEMQQFGLK---PNVVTFSAILNACSRCSSLQEASVL 649

Query: 495 LNEL 498
           L ++
Sbjct: 650 LEQM 653



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 203/377 (53%), Gaps = 5/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++  L + GK E    V+   ++     N+ +++ +++   ++G+  +A  + + MK  G
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P ++TYN +ID  C KGG+  + KA  +F++M + G+ P+ +TFN+LI    +     
Sbjct: 265 CKPNLITYNTIIDA-CGKGGV-DLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + +VF EM   GI   + TYN+LI+ +C  G+++ A ++   M    + PNVVT + +I
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+ K    E+A  L+ D+ E G+ P  ++YNTLID Y K GR +DA      M   G+ 
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            DV TYN LI    ++G  +    + +++   G+   ++TY+ L+ A  K G  + A S+
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
             E FK    K  P++V Y+ LI   C+ G +EDA  LL E+ + G+ PN  TY  + + 
Sbjct: 503 FVE-FKRAGLK--PDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDA 559

Query: 517 MMEKGFIPDIEGHMYNI 533
               G + ++E    N+
Sbjct: 560 YGRNGQVDNVEAAKGNM 576



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 196/361 (54%), Gaps = 7/361 (1%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           K  +  + F RA   G  ++V + + ++ A  + G+  +   V++ MK+   + NL ++N
Sbjct: 214 KVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYN 273

Query: 191 FVLNGLCKAG-KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
            +++   K G  L KA DI E+M+  GV P  +T+N LI   C +G + +   +  VF +
Sbjct: 274 TIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWE--DSQRVFAE 330

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI  +  T+NTLID  CK   +  A  +   M    I+  VVTY+++I+G    G 
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +EA+ L  +M  SG++P+ V+ N LI+ + K    + A     D+   GL   V+TYN 
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LIDAY K+G+ +DA  + + M   G++P+V TY+ LI   S+ G  +   +I  E    G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  +V Y+ L+ + CK G  + AV LL EM +   +   PNIVTYN LI  + + G+++
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ---PNIVTYNSLIDAYGRNGQVD 567

Query: 490 D 490
           +
Sbjct: 568 N 568



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 80/314 (25%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++   +S N L+    K G+F+D     K+M+R  ++ ++ ++N +++   K GK   A
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 464

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVENGILPNEVTFNT 264
           + + + MK+ G+ P V+TY+ LID Y K G    M++ A ++F +    G+ P+ V +++
Sbjct: 465 AGLFDKMKAEGLVPNVLTYSALIDAYSKAG----MHQDATSIFVEFKRAGLKPDVVLYSS 520

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD------------- 311
           LID  CK   +  A+ + +EM   GI   +VTYNSLI+    +G++D             
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINV 580

Query: 312 -----------------------------EAVALRDEMMASGLKPNVVTSNALINGFCKK 342
                                         AV++  EM   GLKPNVVT +A++N   + 
Sbjct: 581 FNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRC 640

Query: 343 KLVEKARVL---------------------------------FDDISEQGLSPSVITYNT 369
             +++A VL                                 FD+I+    +     YN 
Sbjct: 641 SSLQEASVLLEQMRFFDSWVYGIAHGLLMGLREHVWVEAQRLFDEIARMDYATGAAFYNA 700

Query: 370 LIDAYCKEGRMEDA 383
           L D     G+ + A
Sbjct: 701 LTDVLWHFGQRQGA 714


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y++    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P  V++N L++GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  +TY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       L+ E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE---MQRDGYVPSVVT 418



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             ED    G    +  +NIL+  +CK+G I     A +VF  + + G+ P  V+FNTL++
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKL---AQSVFDAITKWGLRPTAVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D A  L +EM+ +GL P
Sbjct: 180 GYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + L+ E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 159/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           ++D +E G   +   FN L+  FCK+  I  A  VF+ +   G+    V++N+L+NG   
Sbjct: 124 YEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LF+++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   VTY  L+   CK+G  + A      M    KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMI---KENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 208/409 (50%), Gaps = 34/409 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            +   K  G  G + +V+    L++  +++ +F D   V KEM+ + I  +   +N ++ 
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI-- 237
           GL KA K+++A   + +M   G  P   TY   I GY + G               G+  
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          GK+ +A + F+ MVE GIL +  T+  L++G  K+  ++ A ++F
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM   GIA  V +Y +LI+G    G + +A ++ DEM+ +GL  NV+  N L+ GFC+ 
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +EKA+ L D++S +G  P+ +TY T+ID YCK G + +AF + + M  +G++PD   Y
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ G  R  +VE    I  E    G  +    +N L+  + K GK++    +++ +  
Sbjct: 739 TTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMD 797

Query: 463 MEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
              +K   PN VTYN++I   C++G LE A  L + + +  L+P   TY
Sbjct: 798 GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITY 846



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 233/500 (46%), Gaps = 78/500 (15%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDM-----------LMLAYVKN 129
           + +  F++  +F     +   +       D+ C NS+II +            +L  V+N
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN 519

Query: 130 -MKPH-LGFEAFK----RAGDY-------------GLKSSVLSCNQLLRALVKEGKFEDV 170
             KP    + AF      AG++             G+  + + C  L+    K+GK  + 
Sbjct: 520 GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEA 579

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
              ++ M  + I  +  ++  ++NGL K GK+N A +I  +M+  G++P V +Y  LIDG
Sbjct: 580 CSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDG 639

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           + K   +G M KA ++F +MV+ G+  N + +N L+ GFC+   I  A ++ +EM   G 
Sbjct: 640 FSK---LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               VTY ++I+G C  G L EA  L DEM   GL P+      L++G C+   VE+A  
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 756

Query: 351 LFDDISEQGLS---------------------------------------PSVITYNTLI 371
           +F+  +E+G +                                       P+ +TYN +I
Sbjct: 757 IFE-TNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMI 815

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D  CKEG +E A  + + M    ++P V TY  L+ G  + G    + ++ +E++  G+ 
Sbjct: 816 DYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIE 875

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP--NIVTYNVLIKGFCQKGKLE 489
              + Y++++ A  K+G + KA+ LLD+MF           +I T   L+ GF + G++E
Sbjct: 876 PDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 935

Query: 490 DANGLLNELLEKGLIPNQTT 509
            A  ++  ++    IP+ +T
Sbjct: 936 VAEKVVENMVRLKYIPDSST 955



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 184/379 (48%), Gaps = 22/379 (5%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           KEG  E  + ++  M    +     ++  ++ G  +   + K  +++ ++K   +     
Sbjct: 362 KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY 421

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           TY   + G C  G +   Y    + K+M  +G  PN V + TLI  F +      A++V 
Sbjct: 422 TYGTAVKGMCSSGDLDGAYN---IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   GIA     YNSLI GL    K+DEA +   EM+ +G KP+  T  A I+G+ + 
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
                A     ++ E G+ P+ +    LI+ YCK+G++ +A +   SM+++G+L D  TY
Sbjct: 539 GEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTY 598

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ GL + G V     I +E+   G+   + +Y  L+    K G  +KA S+ DEM  
Sbjct: 599 TVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV- 657

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
             +     N++ YN+L+ GFC+ G++E A  LL+E+  KG  PN  TY  +         
Sbjct: 658 --QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 514 -------REEMMEKGFIPD 525
                   +EM  KG +PD
Sbjct: 716 LAEAFQLFDEMKLKGLVPD 734



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 201/448 (44%), Gaps = 62/448 (13%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D  L  S+  CN LL AL+K  + +    VYK M  R +  ++ S+  ++   C+ G + 
Sbjct: 182 DLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQ 241

Query: 204 KASDIM---------------------EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
            A D++                     + M   G+ P   +YN+LIDG CK+    ++  
Sbjct: 242 LAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQK---RLED 298

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++  +M   G+  + V ++ LIDG  K  N  AA  +  EM SHG +   + Y+  I 
Sbjct: 299 AKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFIC 358

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ---- 358
            +  +G +++A AL D M+  G+ P      +LI GF ++K V K   L  +I ++    
Sbjct: 359 VMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418

Query: 359 -------------------------------GLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
                                          G  P+V+ Y TLI  + ++ R  DA  + 
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M ++G+ PD   YN LI GLS+   ++  R+ + E+V NG +    TY   +    + 
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+   A   + EM +       PN V    LI  +C+KGK+ +A      ++E+G++ + 
Sbjct: 539 GEFASADKYVKEMLEC---GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595

Query: 508 TTYQIVREEMMEKGFIPDIEGHMYNISG 535
            TY ++   +++ G + D E   + + G
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRG 623



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 195/441 (44%), Gaps = 57/441 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  S  S N L+  L K+ + ED + +  EM    +  +  +++ +++GL K    + A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + ++ +M S G S   + Y+  I   C     G M KA A+F  M+  G+ P    + +L
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFI---CVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+GF +++N+    ++  E+    I     TY + + G+C  G LD A  +  EM ASG 
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +PNVV    LI  F +K     A  +  ++ EQG++P    YN+LI    K  +M++A +
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG------MRAGLV---- 435
               M++ G  PD  TY   I+G    G        + E++  G      +  GL+    
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571

Query: 436 -------------------------TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
                                    TY +L+  L K+GK   A  +  EM     +   P
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM---RGKGIAP 628

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++ +Y  LI GF + G ++ A+ + +E+++ GL  N   Y +                + 
Sbjct: 629 DVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELL 688

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
           +EM  KGF P+   +   I G
Sbjct: 689 DEMSGKGFPPNAVTYCTIIDG 709



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 188/448 (41%), Gaps = 94/448 (20%)

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-------------------KSLGVS- 218
           ++  E  LDSF+F+   LC  G + KA  ++  M                   + +G S 
Sbjct: 90  QKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSD 149

Query: 219 PKVVTYNILIDGYCKKGGIGKM----------------------YKADA----------- 245
            +V+ + ILIDGY +KG + +                       +  DA           
Sbjct: 150 DRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFW 209

Query: 246 -VFKDMVENGILPNEVTFNTLIDGFCKDENISAA----MKVFEEMGS------------- 287
            V+K MVE  ++ +  ++  LI   C+D N+  A    +K  EE+G+             
Sbjct: 210 DVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKK 269

Query: 288 ----HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
                G+     +YN LI+GLC   +L++A +L  EM + GL  + V  + LI+G  K +
Sbjct: 270 SMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGR 329

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
             + A  L  ++   G S   + Y+  I    KEG ME A A+ + M+  GV P    Y 
Sbjct: 330 NADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYA 389

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            LI G  RE NV     ++ E+    +     TY   V  +C  G    A +++ E   M
Sbjct: 390 SLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE---M 446

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV---------- 513
                 PN+V Y  LIK F QK +  DA  +L E+ E+G+ P+   Y  +          
Sbjct: 447 GASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKM 506

Query: 514 ---RE---EMMEKGFIPDIEGHMYNISG 535
              R    EM+E GF PD   +   ISG
Sbjct: 507 DEARSFLLEMVENGFKPDAFTYGAFISG 534


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 200/377 (53%), Gaps = 7/377 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N LL+A  K   +     +   M+    E N  ++N +++ +C+ G +++A
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++  + S G  P  V YN ++ G+C    I +   AD +  +MV     PNE T N +
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCS---IERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+  C+   +       E+M  HG  A VVTYN++I+G+C  G +D A+ L   M + G 
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP++VT N ++ G C     E A  L   +S+    P   T+NT+I  +C++G +  AF 
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M ++G  P+ +TY+ +I GL++ G +E    ++NE+ N G     + Y +L  +L 
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLN 488

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+ K ++ V ++    K++     P  V YN ++ G C+ GK + A  +L +++  G +P
Sbjct: 489 KEDKIEEVVQVV---HKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMP 545

Query: 506 NQTTYQIVREEMMEKGF 522
           +++TY I+ E +  +G+
Sbjct: 546 DESTYIILIEGLFYEGY 562



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 185/376 (49%), Gaps = 9/376 (2%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           A +  G       V   N+L+R L + G+  D   V +       E    ++  +++G C
Sbjct: 83  ALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGP---EATAATYGALVDGYC 139

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           +AG L  A  ++  M +   +     +N LI   C++G   ++  A  V   M+  G  P
Sbjct: 140 RAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERG---RVADALVVLDGMLCRGCAP 196

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + VT+N L+   CK      A+++ + M + G     VTYN +I+ +C +G +D+A  L 
Sbjct: 197 DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELL 256

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           + + + G KPN V  N ++ GFC  +    A  + D++  +   P+  T N +I+  C++
Sbjct: 257 NSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRK 316

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++        M   G   +V TYN +I+G+  +GNV+    +++ + + G +  +VTY
Sbjct: 317 GLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTY 376

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N ++  LC   + + A  L   M KM +  + P+  T+N +I  +CQKG +  A  +  +
Sbjct: 377 NTVLKGLCSADRWEDAEEL---MIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433

Query: 498 LLEKGLIPNQTTYQIV 513
           + EKG  PN TTY  +
Sbjct: 434 MPEKGCNPNSTTYSTI 449



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 169/334 (50%), Gaps = 9/334 (2%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           N ++  LC+ G+   A+ ++E   + G      TY  L+DGYC+ G    +  A  V   
Sbjct: 100 NRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAG---LLEDARRVVGG 153

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M  +    +    N LI   C+   ++ A+ V + M   G A  VVTYN L+   C    
Sbjct: 154 MPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRG 213

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             +A+ L D M A G +PN VT N +I+  C++  V++AR L + +  +G  P+ + YNT
Sbjct: 214 YRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNT 273

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           ++  +C   R  DA  + + M+     P+ +T N +I  L R+G ++ V   + ++  +G
Sbjct: 274 VLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHG 333

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
             A +VTYN ++  +C+ G    A+ LL  M     +   P+IVTYN ++KG C   + E
Sbjct: 334 CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCK---PDIVTYNTVLKGLCSADRWE 390

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           DA  L+ ++ +   +P+ +T+  +     +KG I
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 14/332 (4%)

Query: 207 DIMEDMKSLGVSPK---VVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTF 262
           D+   ++ +G SP+   V   N L+   C++G       ADA    +VE  G      T+
Sbjct: 79  DLDAALRLVGSSPRPPDVPLANRLVRDLCRRG-----RPADAA--RVVEACGPEATAATY 131

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L+DG+C+   +  A +V   M +H  A+    +N LI+ LC  G++ +A+ + D M+ 
Sbjct: 132 GALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLC 191

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P+VVT N L+   CK +   +A  L D +  +G  P+ +TYN +IDA C+EG ++ 
Sbjct: 192 RGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQ 251

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + NS+  RG  P+   YN ++ G            I++E+V         T N+++ 
Sbjct: 252 ARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIIN 311

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G  +K    L+   KM K     N+VTYN +I G C++G ++ A  LL+ +   G
Sbjct: 312 TLCRKGLLQKVTLYLE---KMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
             P+  TY  V + +       D E  M  +S
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMS 400



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 145/273 (53%), Gaps = 4/273 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  L ++G  + V    ++M +     N+ ++N V++G+C+ G ++ A +++ +M+S
Sbjct: 307 NVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQS 366

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P +VTYN ++ G C      +   A+ +   M +N  LP+  TFNT+I  +C+   
Sbjct: 367 FGCKPDIVTYNTVLKGLCSAD---RWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A +VF++M   G      TY+++I GL   GK+++A+ L +EM   G   + +    
Sbjct: 424 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMY-RV 482

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L     K+  +E+   +   + + G+SP  + YNT++   C+ G+ + A  +   M+  G
Sbjct: 483 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCG 542

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +PD STY  LI GL  EG  +  R +++ L +
Sbjct: 543 CMPDESTYIILIEGLFYEGYSKEARELLSRLCS 575



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 5/238 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E       +G K  +++ N +L+ L    ++ED E +  +M +     +  +FN +++
Sbjct: 357 ALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIIS 416

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C+ G + +A ++ + M   G +P   TY+ +I G  K    GKM +A  +  +M   G
Sbjct: 417 FWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA---GKMEQALELLNEMANKG 473

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
              +++ +  L +   K++ I   ++V  ++   GI+   V YN+++ GLC +GK D A+
Sbjct: 474 FNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI-SEQGLSPSVITYNTLI 371
            +  +M++ G  P+  T   LI G   +   ++AR L   + S   LS S+I    L+
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 7/367 (1%)

Query: 155 NQLLRALVKEGKFEDVE-YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           N L+   V  G+ ++ + ++ + M     + ++ ++N +++GLCK G L+ A D++ +M 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
             G  P V+TY IL++G CK G    + +A  V  +M   G+  N V +N LI   C+ E
Sbjct: 418 RRGCEPNVITYAILVNGLCKAG---LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A+ +  EM + G    + TYNSLI GLC   ++DEA  L   M+  G   N VT N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            LI+   ++   +KA  L +D+  +G +   ITYN LI A+CK G +E    +   M+  
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G+  D  + N +I GL + G V+     + + +N G    +VTYN ++  LCK G+ K+A
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEA 654

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           ++L D   +++ E   P+  TYN  I   C++G + DA       +E G +P+  T+ ++
Sbjct: 655 LNLFD---RLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711

Query: 514 REEMMEK 520
              ++++
Sbjct: 712 VYTLLKQ 718



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 207/443 (46%), Gaps = 38/443 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NSI+   L+ A  +  +     +  +     G    V + N ++  L K  K  D   + 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM------------------------- 209
             M  R    +  ++ F+L+GLC+ GKLN+A  I+                         
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 210 -------EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
                  E M + G  P + TYNIL+ G CK+G +   +  D V  +M   G  PN +T+
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS--FARDLV-NEMSRRGCEPNVITY 428

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L++G CK   +  A  V  EM + G+    V YN LI  LC   K+  A+ L  EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G KP++ T N+LI G CK   +++A  LF ++   G   + +TYNTLI A  + G  + 
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N ML RG   D  TYN LI    + GN+E    +  +++ +G+ A  ++ NI++ 
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK GK   A   L +          P+IVTYN ++ G C+ G++++A  L + L  +G
Sbjct: 609 GLCKVGKVDNAFEFLRDAIN---RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665

Query: 503 LIPNQTTYQIVREEMMEKGFIPD 525
           + P+  TY        ++G + D
Sbjct: 666 VRPDAFTYNTFISWQCKEGMVND 688



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 201/392 (51%), Gaps = 11/392 (2%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           D+++   V    P +    F      G+  +V +   +++AL    + +    + ++M +
Sbjct: 187 DLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTK 246

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
                N   +  +++ L +  ++++A  ++E+M  +G  P V T+N +I G CK   + K
Sbjct: 247 HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK---VNK 303

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           ++ A  +   M+  G  P+ +T+  L+ G C+   ++ A K+  ++     A      N+
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA----ILNT 359

Query: 300 LINGLCVDGKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           LING  + G+L EA +  +E M + G +P++ T N L++G CK+  +  AR L +++S +
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+VITY  L++  CK G +E+A  + + M  RG+  +   YNCLI  L R+  V   
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            N+++E+   G +  L TYN L+  LCK  +  +A  L   M     +    N VTYN L
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML---LDGAVANNVTYNTL 536

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           I    ++G  + A  L+N++L +G   ++ TY
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 199/432 (46%), Gaps = 46/432 (10%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           +L+  +++   YP   ++   LH   + GK      I   +  C ++   N++I   +M 
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-CPNNAILNTLINGYVMS 367

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
             +K  +  L     +   ++G +  + + N L+  L KEG       +  EM RR  E 
Sbjct: 368 GQLKEAQSFLN----ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ ++  ++NGLCKAG L +A  ++ +M + G++   V YN LI   C+K    K++ A 
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE---KVHVAL 480

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL---- 300
            +  +M   G  P+  T+N+LI G CK + I  A ++F  M   G  A  VTYN+L    
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 301 -------------------------------INGLCVDGKLDEAVALRDEMMASGLKPNV 329
                                          I   C  G +++ + L ++M+  GL  + 
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           ++ N +ING CK   V+ A     D   +G  P ++TYN++++  CK GR+++A  + + 
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +   GV PD  TYN  I+   +EG V          + NG     +T+N+LV  L K   
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720

Query: 450 SKKAVSLLDEMF 461
            +    +LDE++
Sbjct: 721 QENNFFVLDELW 732



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 47/383 (12%)

Query: 165 GKFEDVEYVYKEMKR------------------------RRIELNLD------------S 188
           GKF+ ++ +  +MK                         + I L LD            S
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           ++ VL  L        A+++  DM S GVSP V T+ I++   C      ++  A ++ +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCM---FNEVDSACSLLR 242

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           DM ++G +PN + + TLI    +   +S A+K+ EEM   G    V T+N +I+GLC   
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K+ +A  L D M+  G  P+ +T   L++G C+   + +AR +   I      P+    N
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILN 358

Query: 369 TLIDAYCKEGRMEDAFAMRN-SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           TLI+ Y   G++++A +  N +M++ G  PD+ TYN L+ GL +EG++   R+++NE+  
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G    ++TY ILV  LCK G  ++A  +L E   M       N V YN LI   C+K K
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHE---MSARGLTINSVIYNCLICALCRKEK 475

Query: 488 LEDANGLLNELLEKGLIPNQTTY 510
           +  A  LL+E+  KG  P+  TY
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTY 498


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 227/497 (45%), Gaps = 109/497 (21%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      L  + ++ + LL    K GK E  E V ++M++  +  N+ +F+ ++NG 
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K G L+KA D++ +M    V P  + Y ILIDGY K G                     
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 566

Query: 236 -----------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                       +G+M +A ++  DM   GI P+ V + +LIDG+ K+ N  AA+ + +E
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 285 MGSH----------------------------------GIAAGVVTYNSLINGLCVDGKL 310
           M                                     G+A   +TYN++IN  C+ GK 
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKT 686

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV----------------EKA------ 348
           ++A+ + +EM + G+ PN VT N LI G CK   V                EKA      
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQI 746

Query: 349 --------------RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
                         +V+ D++ ++G+S  ++TYN LI  YC    +E A    + M   G
Sbjct: 747 HEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 806

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV----TYNILVGALCKDGKS 450
           + P+++TYN L+ GLS  G +E +     +LV+     GLV    TY+ILV    + G  
Sbjct: 807 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 866

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           KK + L  EM     +   P + TYNVLI  + + GK+ +A  LLN+LL KG IPN  TY
Sbjct: 867 KKTIILHIEMIT---KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 923

Query: 511 QIVREEMMEKGFIPDIE 527
            I+    +   + P+I+
Sbjct: 924 DILTCGWLNLSYEPEID 940



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 256/541 (47%), Gaps = 98/541 (18%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S L+ F ++GK T  + +F  +      L  N +    ++ +  K+ +    F    +  
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMG--LDPNHVSYATIINSLFKSGRVMEAFNLQSQMV 418

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+   +++C  ++  L K GK ++ E V++ + +  +  N  +++ +L+G CK GK+ 
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A  +++ M+   V P V+T++ +I+GY KKG + K   A  V ++MV+  ++PN + + 
Sbjct: 479 LAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK---AVDVLREMVQRNVMPNTIVYA 535

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LIDG+ K      A    +EM S  +    V ++ L+N L   G++DEA +L  +M + 
Sbjct: 536 ILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSK 595

Query: 324 GLKPNVVTSNALINGFCKK-------KLVEKAR---VLFDDIS----------------- 356
           G+ P++V   +LI+G+ K+        +V++ +   + FD ++                 
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR 655

Query: 357 -------EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
                  E GL+P  ITYNT+I+ YC +G+ EDA  + N M   G++P+  TYN LI GL
Sbjct: 656 YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGL 715

Query: 410 SREGNV------------------------------------EGVRNIMNELVNNGMRAG 433
            + G V                                    +  + +++E+V  G+ A 
Sbjct: 716 CKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISAD 775

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG----KLE 489
           LVTYN L+   C     +KA+    +MF    +   PNI TYN L+ G    G     +E
Sbjct: 776 LVTYNALIRGYCTGSHVEKALKTYSQMFV---DGIAPNITTYNTLLGGLSNAGLMEEMME 832

Query: 490 DANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNI 533
           +   L++E+ E+GL+PN  TY I+                  EM+ KGF+P ++ +   I
Sbjct: 833 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 892

Query: 534 S 534
           S
Sbjct: 893 S 893



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 234/473 (49%), Gaps = 28/473 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTC---SDSLCRNSIIID--------------MLMLAY 126
           + L  F K G  T   ++F+ +       D L  N ++                 L+ AY
Sbjct: 272 TLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAY 331

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
            K +        +K+    G+   V++C+ +L    + GK  +   +++EM    ++ N 
Sbjct: 332 CKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNH 391

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            S+  ++N L K+G++ +A ++   M   G+S  +VT   ++DG  K   +GK  +A+ V
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK---VGKTKEAEEV 448

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+ +++  + PN VT++ L+DG+CK   +  A  V ++M    +   V+T++S+ING   
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAK 508

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L +AV +  EM+   + PN +    LI+G+ K    + A     ++  + L  S + 
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           ++ L++   + GRM++A ++   M  +G+ PD+  Y  LI G  +EGN     +I+ E+ 
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628

Query: 427 NNGMRAGLVTYNILVGALCKDGK--SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
              +R  +V YN L+  L + GK   +   S + E+         P+ +TYN +I  +C 
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL------GLAPDCITYNTIINTYCI 682

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
           KGK EDA  +LNE+   G++PN  TY I+   + + GF+P    H + +   S
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYS 735



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 213/429 (49%), Gaps = 25/429 (5%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           LC +SI  ++L+  Y +               D G+   V+  N L+    +        
Sbjct: 193 LCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQAT 252

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA-------------------SDIMEDM 212
            + +   R  +++++ ++N +L   CK G L +A                   +D++   
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +   + P +VTY  LI  YCK  G+ +   + +++K M+ NGI+P+ VT ++++ GFC+ 
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEE---SHSLYKKMIMNGIMPDVVTCSSILYGFCRH 369

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             ++ A  +F EM   G+    V+Y ++IN L   G++ EA  L+ +M+  G+  ++VT 
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             +++G  K    ++A  +F+ I +  L+P+ +TY+ L+D YCK G+ME A  +   M  
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
             V P+V T++ +I G +++G +    +++ E+V   +    + Y IL+    K G+   
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A     EM     E+   N++ +++L+    + G++++A  L+ ++  KG+ P+   Y  
Sbjct: 550 ADDFCKEMKSRRLEES--NVI-FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 513 VREEMMEKG 521
           + +   ++G
Sbjct: 607 LIDGYFKEG 615



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 211/471 (44%), Gaps = 93/471 (19%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F      GL  ++   N LL      G    V+ +Y +M    +  ++ S N +++ LC
Sbjct: 81  TFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLC 140

Query: 198 KAGKL---------NKASDI------------------------MEDMKSLGVSPKVVTY 224
           K G L         N   DI                        + +M   G+    +T 
Sbjct: 141 KVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITC 200

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           NIL+ GYC+   IG +  A+ V  ++V+ G+  + +  NTLIDG+C+   +S A ++ E 
Sbjct: 201 NILVKGYCR---IGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIEN 257

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-------------------SGL 325
                +   +VTYN+L+   C  G L  A +L +E++                      L
Sbjct: 258 SWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNL 317

Query: 326 KP-----------------------------------NVVTSNALINGFCKKKLVEKARV 350
           +P                                   +VVT ++++ GFC+   + +A V
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF ++ E GL P+ ++Y T+I++  K GR+ +AF +++ M+ RG+  D+ T   ++ GL 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           + G  +    +   ++   +    VTY+ L+   CK GK + A  +L    KMEKE   P
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQ---KMEKEHVPP 494

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           N++T++ +I G+ +KG L  A  +L E++++ ++PN   Y I+ +   + G
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 166/340 (48%), Gaps = 27/340 (7%)

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           + + AS     M++LG+ P +  +N L+  +   G + ++     ++ DM+  G++P+  
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQV---KLMYSDMLFCGVVPDVF 130

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           + N L+   CK  ++  A+       +  +    VTYN++I G C  G +D+   L  EM
Sbjct: 131 SVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEM 188

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  GL  + +T N L+ G+C+  LV+ A  +  ++ + G++  VI  NTLID YC+   M
Sbjct: 189 VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLM 248

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV----------NN-- 428
             A  +  +     V  D+ TYN L+    + G++    ++ NE++          NN  
Sbjct: 249 SQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDV 308

Query: 429 -------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
                   ++  LVTY  L+ A CK    +++ SL     KM      P++VT + ++ G
Sbjct: 309 VTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYK---KMIMNGIMPDVVTCSSILYG 365

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           FC+ GKL +A  L  E+ E GL PN  +Y  +   + + G
Sbjct: 366 FCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG 405



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 195/448 (43%), Gaps = 81/448 (18%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+R  +   +F      +  M+   +   L  +N +L     +G +++   +  DM   G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 217 VSPKVVTYNILIDGYCKKG----GIGKMYKADAV-------------------------- 246
           V P V + N+L+   CK G     +G +   D V                          
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
             +MV+ G+  + +T N L+ G+C+   +  A  V   +   G+   V+  N+LI+G C 
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI----------- 355
              + +A  L +    S +K ++VT N L+  FCK   + +A  LF++I           
Sbjct: 245 AVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 356 --------SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
                     + L P+++TY TLI AYCK   +E++ ++   M+  G++PDV T + ++ 
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILY 364

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL----------- 456
           G  R G +     +  E+   G+    V+Y  ++ +L K G+  +A +L           
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 457 --------LDEMFKMEKEKK-------------WPNIVTYNVLIKGFCQKGKLEDANGLL 495
                   +D +FK+ K K+              PN VTY+ L+ G+C+ GK+E A  +L
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFI 523
            ++ ++ + PN  T+  +     +KG +
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGML 512



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 5/238 (2%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F TLI  +   +  S A   F  M + G+   +  +N+L+      G + +   +  +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+ P+V + N L++  CK   ++ A     +     +    +TYNT+I  +C++G ++
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
             F + + M+ RG+  D  T N L+ G  R G V+    +M  LV+ G+   ++  N L+
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
              C+     +A  L++  ++ + +    +IVTYN L+K FC+ G L  A  L NE+L
Sbjct: 240 DGYCEAVLMSQATELIENSWRSDVK---IDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 5/167 (2%)

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI  Y    R   A A  + M   G++P +  +N L+   +  G V  V+ + ++++
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+   + + N+LV +LCK G    A+  L     ++ +      VTYN +I GFCQKG
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDN-----VTYNTVIWGFCQKG 176

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            ++   GLL+E++++GL  +  T  I+ +     G +   E  MYN+
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 235/487 (48%), Gaps = 34/487 (6%)

Query: 43  PVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIF 102
           P L  R+F W+T+  R S    +T    H+LV+            M  K+  F +   I 
Sbjct: 77  PELGFRFFIWTTR--RRSFRSWVT----HNLVI-----------DMLAKDDGFDTYWKIL 119

Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
             L   +  +   +  +  L+ AY K+       E+F +  D+G K  V + N +L  +V
Sbjct: 120 EELKNSNIQIPPPTFSV--LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           ++  F     VY +M +     N  +F  +LNGLCK GK + A  + ++M   G+ P  +
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            Y I++ G C+      +++   +   M  +G  P+ +T N L+DGFCK   I  A  + 
Sbjct: 238 IYTIILSGLCQAKRTDDVHR---LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALL 294

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +     G   G+  Y+SLI+GL    + DE      +M  +G++P+VV    LI GFC+ 
Sbjct: 295 QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEV 354

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            +V+ A  + +D++++GLSP    YN LI  +C  G ++ A +++  +      P   TY
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             LI G+ R G ++  R I N++ N G    ++T+N L+  LCK G+ ++A  L    +K
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF---YK 471

Query: 463 MEKEKKWPNIVTY------NVL--IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           ME  K  P++          V+    GF +  + EDA  +L+++++ G  P+   Y+ + 
Sbjct: 472 MEIGKN-PSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530

Query: 515 EEMMEKG 521
                KG
Sbjct: 531 TWSCRKG 537



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 218/477 (45%), Gaps = 32/477 (6%)

Query: 80  PKI-RSFLHMFVKNGKF-----------------TSVSTIFHALSTCSDSLCR-----NS 116
           P+I RS LH   K  +F                   V T+   ++   D+L +     +S
Sbjct: 5   PQICRSVLHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSS 64

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
            I++ +M    +  +P LGF  F          S ++ N ++  L K+  F+    + +E
Sbjct: 65  EIVNDVM---REQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEE 121

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           +K   I++   +F+ ++    K+G   KA +    MK  G  P V TYN ++    +K  
Sbjct: 122 LKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKE- 180

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                 A AV+  M++    PN  TF  L++G CK+     A+K+F+EM   GI    + 
Sbjct: 181 --VFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMI 238

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y  +++GLC   + D+   L + M  SG  P+ +T NAL++GFCK   +++A  L     
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           ++G    +  Y++LID   +  R ++       M   G+ PDV  Y  LI G    G V+
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
              N++N++   G+      YN L+   C  G   KA SL     ++ K   +P   TY 
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL---QLEISKNDCFPTSCTYT 415

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +LI G C+ G L++A  + N++   G  P+  T+  + + + + G + +     Y +
Sbjct: 416 ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 48/327 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL       N L++     G  +    +  E+ +        ++  ++ G+C+ G L++A
Sbjct: 371 GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEA 430

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN------- 258
             I   M++LG SP ++T+N LIDG CK G   ++ +A  +F  M E G  P+       
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAG---ELEEARHLFYKM-EIGKNPSLFLRLSQ 486

Query: 259 --EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL------ 310
             +   +T  +GF + +    A +V ++M  +G       Y  L+   C  GKL      
Sbjct: 487 GADRVMDT-ANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 545

Query: 311 ------------DEAVALRDEMMASG---------LKPNVVTSNALIN-------GFCKK 342
                       DE + L +E    G         L+ N   +N  I        G C+ 
Sbjct: 546 WLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQA 605

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           +  E+A  +F  + E  +  +  +   LI+  CK+G +E A  +    L++G +      
Sbjct: 606 RRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC 665

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNG 429
           N L+  L  +  ++   +++N + + G
Sbjct: 666 NQLLRSLILQDKMKHALDLLNRMNSAG 692


>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 185/360 (51%), Gaps = 7/360 (1%)

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           I ++   C  S C    + D L   Y +  K     + F +  DYG    V SCN  + A
Sbjct: 100 ILYSYRICDSSPC----VFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISA 155

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
            +   + +     Y+EM+R RI  N+ + N V+   CK GKL KA ++ + M+++G SP 
Sbjct: 156 SISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPT 215

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           + +YN LI GYC KG +    K   +   M +NG+ P++VTFNTLI+GFC+   +  A K
Sbjct: 216 ITSYNTLIAGYCNKGLLNSGMKLKIL---MEKNGVRPDDVTFNTLINGFCRGGKLHEANK 272

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +F EM ++ +    +TYN+LING    G  +    L DEM+ +G+K +++T NALI G C
Sbjct: 273 IFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 332

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
            +   +KA  L  ++  + L P+  T++ LI   C     E AF +  SM+  G  P+  
Sbjct: 333 MEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYH 392

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           T+  LI+   +  + +G   ++ E+    +     T + L   L   GK + A+ L  EM
Sbjct: 393 TFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 452



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 10/323 (3%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC--KKGGIGKMYKADAV 246
           F+ +     +  KL  A D+   MK  G  P+V + N  I      ++G I     A   
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDI-----ALTF 168

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++M    I PN  T N ++  FCK   +  A++VF++M + G +  + +YN+LI G C 
Sbjct: 169 YREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCN 228

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+  + L+  M  +G++P+ VT N LINGFC+   + +A  +F ++    + P+ IT
Sbjct: 229 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTIT 288

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           YNTLI+ Y + G  E    + + ML  G+  D+ TYN LI GL  EG  +    ++ EL 
Sbjct: 289 YNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELD 348

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
              +     T++ L+   C    S++A  L   M +       PN  T+ +LI  FC+  
Sbjct: 349 RENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCH---PNYHTFKMLISTFCKNE 405

Query: 487 KLEDANGLLNELLEKGLIPNQTT 509
             + A  ++ E+ E+ + P+  T
Sbjct: 406 DFDGAVEVVREMSERSIAPDSDT 428



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 153/303 (50%), Gaps = 19/303 (6%)

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K+  A  VF  M + G LP   + N  I      +    A+  + EM  + I+  V T N
Sbjct: 126 KLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLN 185

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            ++   C  GKL++A+ +  +M   G  P + + N LI G+C K L+     L   + + 
Sbjct: 186 MVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKN 245

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P  +T+NTLI+ +C+ G++ +A  + + M    V+P+  TYN LI G S+ GN E  
Sbjct: 246 GVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMG 305

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + +E++ NG++A ++TYN L+  LC +G++KKA  L+ E   +++E   PN  T++ L
Sbjct: 306 GRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKE---LDRENLVPNSSTFSAL 362

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGF 522
           I G C +   E A  L   ++  G  PN  T+++                V  EM E+  
Sbjct: 363 ITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSI 422

Query: 523 IPD 525
            PD
Sbjct: 423 APD 425



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 3/223 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +  + L+  + +  K H   + F       +  + ++ N L+    + G  E    ++
Sbjct: 250 DDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLH 309

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R  I+ ++ ++N ++ GLC  G+  KA+ +++++    + P   T++ LI G C +
Sbjct: 310 DEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVR 369

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
               + ++   ++K M+ +G  PN  TF  LI  FCK+E+   A++V  EM    IA   
Sbjct: 370 KNSERAFQ---LYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDS 426

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
            T + L  GL + GK + A+ L  EM    L P        IN
Sbjct: 427 DTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKXKTIN 469


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 211/398 (53%), Gaps = 10/398 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M       N+ S+N +
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164

Query: 193 LNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           L GLC   +  +A ++   M D +  G  P VV+Y  +I+G+ K+G   K Y   + + +
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY---STYHE 221

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M++ GILP+ VT+N++I   CK + +  AM+V   M  +G+    +TYNS+++G C  G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
             EA+    +M + G++P+VVT + L++  CK     +AR +FD ++++GL P + TY T
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+  Y  +G + +   + + M+  G+ PD   ++ LI   + +G V+    + +++   G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    VTY  ++G LCK G+ + A+   ++M     E   P  + YN LI G C   K E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI---DEGLSPGNIVYNSLIHGLCTCNKWE 458

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            A  L+ E+L++G+  N   +  + +   ++G + + E
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 230/476 (48%), Gaps = 23/476 (4%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTC--------------SDS 111
           ++ +L  A+   K    L+  VKNG      T   I H   +               SD 
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  + +   +LM    KN +     + F      GLK  + +   LL+    +G   ++ 
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +   M R  I  +   F+ ++      GK+++A  +   M+  G++P  VTY  +I   
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK G   ++  A   F+ M++ G+ P  + +N+LI G C       A ++  EM   GI 
Sbjct: 417 CKSG---RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              + +NS+I+  C +G++ E+  L + M+  G+KPNV+T N LING+C    +++A  L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              +   GL P+ +TY+TLI+ YCK  RMEDA  +   M   GV PD+ TYN ++ GL +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                  + +   +  +G +  L TYNI++  LCK+  +  A+ +   +  M+ + +   
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR- 652

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
             T+N++I    + G+ ++A  L       GL+PN  TY+++ E ++ +G + +++
Sbjct: 653 --TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 171/324 (52%), Gaps = 6/324 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++  D GL    +  N L+  L    K+E  E +  EM  R I LN   FN +++  CK
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ ++  + E M  +GV P V+TYN LI+GYC  G   KM +A  +   MV  G+ PN
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG---KMDEAMKLLSGMVSVGLKPN 545

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT++TLI+G+CK   +  A+ +F+EM S G++  ++TYN ++ GL    +   A  L  
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            +  SG +  + T N +++G CK KL + A  +F ++    L     T+N +IDA  K G
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R ++A  +  +    G++P+  TY  +   +  +G +E +  +   + +NG        N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725

Query: 439 ILVGALCKDGKSKKA---VSLLDE 459
            +V  L + G+  +A   +S++DE
Sbjct: 726 FIVRELLQRGEITRAGTYLSMIDE 749



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 45/366 (12%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ED  +V+ E+ RR    ++   N  L            +D+  D  +  VS     YN  
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRAL------------ADVARDSPAAAVS----RYN-- 73

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
                      +M +A A       + + P+  T+  LI   C+   +         +  
Sbjct: 74  -----------RMARAGA-------DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK 115

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +   
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRS 174

Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           ++A  L   +++    G  P V++Y T+I+ + KEG  + A++  + MLDRG+LPDV TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N +IA L +   ++    ++N +V NG+    +TYN ++   C  G+ K+A+  L    K
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK---K 291

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTY++L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 352 LVEMHG 357



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 144/320 (45%), Gaps = 59/320 (18%)

Query: 99  STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
           +++ H L TC+       +I++ML                     D G+  + +  N ++
Sbjct: 445 NSLIHGLCTCNKWERAEELILEML---------------------DRGICLNTIFFNSII 483

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
            +  KEG+  + E +++ M R  ++ N+ ++N ++NG C AGK+++A  ++  M S+G+ 
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI------------ 266
           P  VTY+ LI+GYCK   I +M  A  +FK+M  +G+ P+ +T+N ++            
Sbjct: 544 PNTVTYSTLINGYCK---ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 267 -----------------------DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
                                   G CK++    A+++F+ +    +     T+N +I+ 
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           L   G+ DEA  L     ++GL PN  T   +      + L+E+   LF  + + G +  
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720

Query: 364 VITYNTLIDAYCKEGRMEDA 383
               N ++    + G +  A
Sbjct: 721 SGMLNFIVRELLQRGEITRA 740


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 248/506 (49%), Gaps = 16/506 (3%)

Query: 6   NSTIEDITELIRNHHWSKLKNT--DPNT--VILQLFNSDADPVLILRYFCWSTKELRASH 61
           N  IE+  + I  H+ + + N   + NT  V++ L N   +P L   YF    KE   SH
Sbjct: 33  NYPIEE-EQTINTHYQNPVTNHLFEINTAKVVITLNNLRNEPSLAFSYFN-QLKESGYSH 90

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVK-NGKFT-SVSTIFHALS--TCSDSLCRNSI 117
                  ++  L       K+ S L   +K +G     +  +F AL     ++S      
Sbjct: 91  DPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQ 150

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           + D L+   V +      F+   +    G    +LSCN L+  LV+  K +    +Y+++
Sbjct: 151 VSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQL 210

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           K   +  N  ++   + G C+ G L +A D+  DM+  GV+P   +Y   I+G C  G  
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
              +K   V +D++   I  +   +  +I GFC +  +  A  +  EM   G A  V  Y
Sbjct: 271 DLGFK---VLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVY 327

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +LI+G C+ G L +A+AL DEM++ G+K N V  ++++ G  +  +  +    F +  +
Sbjct: 328 CALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKK 387

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G+      YN ++DA CK G++E+A  +   M  + ++PD+  Y  +I+G   +G V  
Sbjct: 388 MGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             NI  E+ + G +  +VTYN+L G   ++G +++A+SLL+    ME +   P+ VT+N+
Sbjct: 448 ALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLN---YMETQGVKPDTVTHNM 504

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGL 503
           +I+G C  GK++DA    + L EK L
Sbjct: 505 IIEGLCIGGKVDDAQAFFDNLEEKCL 530



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 168/315 (53%), Gaps = 6/315 (1%)

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           +G  ++A D++   K  G +P++++ N L++   +     K+  A A+++ +   G+ PN
Sbjct: 162 SGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESR---KVDMAIAIYRQLKAFGLNPN 218

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           + T+   I GFC+  N++ A+ VF +M   G+     +Y + I GLC+ G+ D    +  
Sbjct: 219 DYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQ 278

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +++ + +  +V     +I GFC +  +++A  +  ++ +QG +P V  Y  LI  YC  G
Sbjct: 279 DVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVG 338

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            +  A A+ + M+ +GV  +    + ++ GLS+ G    V N   E    G+      YN
Sbjct: 339 NLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYN 398

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           +++ ALCK GK ++AV LL E   M+ +K  P+I+ Y  +I G+  KGK+ DA  +  E+
Sbjct: 399 VVMDALCKLGKVEEAVELLVE---MKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREM 455

Query: 499 LEKGLIPNQTTYQIV 513
            + G  P+  TY ++
Sbjct: 456 KDIGHKPDIVTYNVL 470



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 191/366 (52%), Gaps = 25/366 (6%)

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
           +GK  D   +Y+EMK    + ++ ++N +  G  + G   +A  ++  M++ GV P  VT
Sbjct: 442 KGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVT 501

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           +N++I+G C  G   K+  A A F D +E   L N   ++ +++G+C+  +++ A  +  
Sbjct: 502 HNMIIEGLCIGG---KVDDAQAFF-DNLEEKCLEN---YSAMVNGYCEANHVNKAFALLI 554

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
            +   G      ++  L+  LC +G  ++A+ L + M+A  + P ++  + +I    +  
Sbjct: 555 RLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAG 614

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +EKA+ +F+ + ++GL+P VITY  +I+ YC+  +M++A+ +   M +RG+ PDV TY 
Sbjct: 615 EMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYT 674

Query: 404 CLIAGLSR---------------EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            L+   S+               + N+     + +E+ +  ++  ++ Y +L+   CK  
Sbjct: 675 VLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTN 734

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             + A++L +EM         P+ VTY  L+ G+C  G ++ A  L +E+L KG+ P+  
Sbjct: 735 NIQDAINLFNEMI---DRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAH 791

Query: 509 TYQIVR 514
           T  ++ 
Sbjct: 792 TMSVLH 797



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 110/202 (54%), Gaps = 14/202 (6%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +++  ++++ AL + G+ E  +YV+  +  R +  ++ ++  ++NG C+  K+ +A 
Sbjct: 596 INPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAW 655

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------------GKMYKADAVFKDMVEN 253
            ++ DMK+ G+ P V+TY +L++  C K  +               M    A++ +M + 
Sbjct: 656 HVLGDMKNRGIEPDVITYTVLLNN-CSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDM 714

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+ + +  LID  CK  NI  A+ +F EM   G+A   VTY +L++G C  G + +A
Sbjct: 715 DIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKA 774

Query: 314 VALRDEMMASGLKPNVVTSNAL 335
           V L DEM+  G++P+  T + L
Sbjct: 775 VVLFDEMLNKGIRPDAHTMSVL 796



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 46/283 (16%)

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCV-----------------DGKLDEAV---- 314
           S A   F ++   G +    TY +++  LC                  DG LD  +    
Sbjct: 74  SLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLF 133

Query: 315 -ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
            AL D +        V  S+ALI       + ++A  +       G +P +++ N L++ 
Sbjct: 134 EALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNR 193

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             +  +++ A A+   +   G+ P+  TY   I G  R+GN+    ++  ++  +G+   
Sbjct: 194 LVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPN 253

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDAN 492
             +Y   +  LC  G+S     +L ++       K P ++  Y V+I+GFC + KL++A 
Sbjct: 254 SFSYTTFIEGLCLHGRSDLGFKVLQDVIN----AKIPMDVFAYTVVIRGFCSEMKLKEAE 309

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            +L                    EM ++GF PD+  +   ISG
Sbjct: 310 SIL-------------------REMEKQGFAPDVYVYCALISG 333



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    D GL   V++   ++    +  K ++  +V  +MK R IE ++ ++  +LN   K
Sbjct: 623 FNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSK 682

Query: 199 AG---------------KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
                             +   S +  +MK + + P V+ Y +LID +CK   I     A
Sbjct: 683 IDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQ---DA 739

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
             +F +M++ G+ P+ VT+  L+ G+C   NI  A+ +F+EM + GI
Sbjct: 740 INLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGI 786


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 192/353 (54%), Gaps = 8/353 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           ++LC NS     L+  YV+        E  +   + G++++V +   L+ +L        
Sbjct: 211 NALCYNS-----LLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISK 265

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           VE ++ EMK   +  ++  +  V+N  C+AG + +A+ ++++    GV P   TY +LI+
Sbjct: 266 VEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIN 325

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK   IG+M  A+ +  DM   G+  N++ FNT+IDG+C+   +  A+K+   M   G
Sbjct: 326 GFCK---IGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 382

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   + TYN+L  GLC   +LDEA  L   M+  G+ PN VT   LI+  CK   + +AR
Sbjct: 383 VELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEAR 442

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF +++E+G +PSV+TYN +ID Y K+G + +A   R  M  +G +PDV TY  L+ G 
Sbjct: 443 RLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGH 502

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
              G V+    +  E+   G    +V Y  L+  L K+G+S+ A  L D+M K
Sbjct: 503 CVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 555



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 212/414 (51%), Gaps = 22/414 (5%)

Query: 97  SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQ 156
           SVS +  A S   D LC++  + D   L  + +M  H            G+  + L  N 
Sbjct: 174 SVSPL--AASVVVDGLCKSGRVDDARRL--LDDMPRH------------GVSLNALCYNS 217

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL   V++     V+ + + M+   IE  + ++  +++ L  A  ++K   +  +MK+  
Sbjct: 218 LLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANN 277

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V   V  Y  +I+ YC+    G M +A  V  + V NG+ PNE T+  LI+GFCK   + 
Sbjct: 278 VVGDVYLYTAVINAYCRA---GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA  +  +M   G+    + +N++I+G C  G +D+A+ ++  M   G++ ++ T N L 
Sbjct: 335 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 394

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
            G C+   +++A+ L   + E G+ P+ +TY TLI  +CK+G M +A  +   M ++G  
Sbjct: 395 CGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGAT 454

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P V TYN +I G +++G++        E+   G    + TY  LV   C +GK   A+ L
Sbjct: 455 PSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKL 514

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +EM +   E   PN+V Y  LI G  ++G+ E A  L +++L+ GLIP+ + Y
Sbjct: 515 FEEMKQRGTE---PNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 565



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 193/362 (53%), Gaps = 22/362 (6%)

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + V++GLCK+G+++ A  +++DM   GVS   + YN L+D Y ++   G++ +   + + 
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE---ILEI 237

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI     T+  L+D      +IS    +F EM ++ +   V  Y ++IN  C  G 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +  A  + DE + +G++PN  T   LINGFCK   +E A +L  D+  QG+  + I +NT
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +ID YC++G ++DA  ++ +M   GV  D+ TYN L  GL R   ++  + +++ ++  G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    VTY  L+   CKDG   +A  L  EM    ++   P++VTYNV+I G+ +KG + 
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREM---AEKGATPSVVTYNVMIDGYTKKGSIR 474

Query: 490 DANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDIEGHMYNI 533
           +A     E+ +KG +P+  TY  +                 EEM ++G  P++  +   I
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALI 534

Query: 534 SG 535
           SG
Sbjct: 535 SG 536



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 179/366 (48%), Gaps = 36/366 (9%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTCSD---------SLCRNS 116
           LL   V  K   +++  L +    G   +V T   +  +LST  D          +  N+
Sbjct: 218 LLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANN 277

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL-------------SCNQLLRALVK 163
           ++ D+ +   V N        A+ RAG+    + VL             +   L+    K
Sbjct: 278 VVGDVYLYTAVIN--------AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCK 329

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G+ E  E +  +M+ + + LN   FN +++G C+ G ++ A  I   M+ +GV   + T
Sbjct: 330 IGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYT 389

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN L  G C+   + ++ +A  +   M+E G++PN VT+ TLI   CKD ++  A ++F 
Sbjct: 390 YNTLACGLCR---VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFR 446

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM   G    VVTYN +I+G    G + EA   R EM   G  P+V T  +L++G C   
Sbjct: 447 EMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNG 506

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            V+ A  LF+++ ++G  P+V+ Y  LI    KEGR E AF + + ML  G++PD S Y+
Sbjct: 507 KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYS 566

Query: 404 CLIAGL 409
            L+  L
Sbjct: 567 ALVGSL 572



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 3/299 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++ A  + G       V  E     +E N  ++  ++NG CK G++  A  ++ DM+  G
Sbjct: 288 VINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG 347

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V    + +N +IDGYC+KG +    K  A  + M   G+  +  T+NTL  G C+   + 
Sbjct: 348 VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKM---GVELDIYTYNTLACGLCRVNRLD 404

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A  +   M   G+    VTY +LI+  C DG + EA  L  EM   G  P+VVT N +I
Sbjct: 405 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMI 464

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+ KK  + +A     ++ ++G  P V TY +L+  +C  G+++ A  +   M  RG  
Sbjct: 465 DGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE 524

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           P+V  Y  LI+GL++EG  E    + ++++  G+      Y+ LVG+L  D +    VS
Sbjct: 525 PNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 177/347 (51%), Gaps = 27/347 (7%)

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVT---YNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           AG+L  A+ ++E  ++LG  P  V+    ++++DG CK G   ++  A  +  DM  +G+
Sbjct: 154 AGRLADAAGLLE--RALGSCPGSVSPLAASVVVDGLCKSG---RVDDARRLLDDMPRHGV 208

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N + +N+L+D + + ++     ++ E M + GI A V TY  L++ L     + +  A
Sbjct: 209 SLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEA 268

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L +EM A+ +  +V    A+IN +C+   + +A  + D+    G+ P+  TY  LI+ +C
Sbjct: 269 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G+ME A  +   M  +GV  +   +N +I G  R+G V+    I   +   G+   + 
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN L   LC+  +  +A +LL  M +M      PN VTY  LI   C+ G + +A  L 
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEM---GVVPNYVTYTTLISIHCKDGDMVEARRLF 445

Query: 496 NELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            E+ EKG  P+  TY ++                R+EM +KGF+PD+
Sbjct: 446 REMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDV 492


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 202/387 (52%), Gaps = 22/387 (5%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++  L + G  ++   V+KEMK   I  ++ S++ +++G C+ G++++AS++ ++M++
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 343

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P + +Y+ILIDG+CK+G + K   A  VF++M  +GILP+  +++ LIDGFC+  +
Sbjct: 344 SGILPNIYSYSILIDGFCKEGRVDK---ALEVFEEMKNSGILPDVYSYSILIDGFCRKGD 400

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           + +A+K +EEM S+  +     Y SLI G     +   A+     M   G+ P+ +  N 
Sbjct: 401 MDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNH 460

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++ +C+K    KA  L +   E G+  +  +YN  I   C+    E A  +   ML R 
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           VLPDV  Y+ LI+  ++  N E    +  ++   G+   + TY IL+     D K   A 
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
            L      M++ + +P+ + Y  L+ GFC  G++  A  L +E+  +G  PN  TY    
Sbjct: 581 RLFK---GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637

Query: 513 --------------VREEMMEKGFIPD 525
                         + E+M E+G  PD
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPD 664



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 221/437 (50%), Gaps = 41/437 (9%)

Query: 114 RNSIIIDMLMLAYVKN-MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
           +++++ DML+  +  N M  H  +  F RA D G++ +++SCN LL+ LV++ + + V  
Sbjct: 134 KSNVVFDMLIKVFASNSMLEHANY-VFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRL 192

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCK----AGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           +++ + +     N+ ++  ++N  C+    +  + +AS+I+  +   G +P VVTY   I
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 252

Query: 229 DGYCKKGGIGKMYK--------------------------------ADAVFKDMVENGIL 256
            G CK G  G  ++                                A  VFK+M  +GIL
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+  +++ LIDGFC+   +  A +VF+EM + GI   + +Y+ LI+G C +G++D+A+ +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +EM  SG+ P+V + + LI+GFC+K  ++ A   +++++    SPS   Y +LI  Y K
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             +  +A      M   G+ PD    N +++   R+ +      +  +   NG+     +
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN  +  +C+    +KA+ LL  M    K    P++V Y+ LI  F ++   E A  L  
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVML---KRNVLPDVVNYSTLISCFAKRLNSEKAVMLFI 549

Query: 497 ELLEKGLIPNQTTYQIV 513
           ++ + G+  N  TY I+
Sbjct: 550 KMTKVGITFNVKTYTIL 566



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 206/407 (50%), Gaps = 36/407 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E FK   + G+   V S + L+    ++G+ +    V+KEM+   I  N+ S++ +++G 
Sbjct: 301 EVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGF 360

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-------------- 242
           CK G+++KA ++ E+MK+ G+ P V +Y+ILIDG+C+KG +    K              
Sbjct: 361 CKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSA 420

Query: 243 ----------------ADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                           A+A+  F+ M + G+ P+ +  N ++  +C+  + + A+ + E+
Sbjct: 421 FNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEK 480

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
              +G+     +YN  I+ +C     ++A+ L   M+   + P+VV  + LI+ F K+  
Sbjct: 481 FQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLN 540

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            EKA +LF  +++ G++ +V TY  LI+ +  + +M+ A+ +   M +  V PD   Y  
Sbjct: 541 SEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTS 600

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+AG    G +   R + +E+   G    +VTY   +    K  K+ +A  L +   KM+
Sbjct: 601 LVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE---KMK 657

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPNQTTY 510
           +   +P+ + Y +LI  FC  G++  A  L +E+ ++G   PN   Y
Sbjct: 658 ERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMY 704



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 195/423 (46%), Gaps = 44/423 (10%)

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           SI+ID     + +  +     E FK   + G+  ++ S + L+    KEG+ +    V++
Sbjct: 319 SILID----GFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           EMK   I  ++ S++ +++G C+ G ++ A    E+M S   SP    Y  LI GY K  
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
                 K    F+ M + G+ P+ +  N ++  +C+  + + A+ + E+   +G+     
Sbjct: 435 QFANALKE---FRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 491

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +YN  I+ +C     ++A+ L   M+   + P+VV  + LI+ F K+   EKA +LF  +
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           ++ G++ +V TY  LI+ +  + +M+ A+ +   M +  V PD   Y  L+AG    G +
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611

Query: 416 EGVRNIMNELVNNGMRAGLVTYN-----------------------------------IL 440
              R + +E+   G    +VTY                                    +L
Sbjct: 612 TRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTML 671

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + A C  G+  +A +L DEM   ++ +  PN+V Y  LI  + +  K + A  L  E+  
Sbjct: 672 IAAFCNTGEMNRAEALFDEM--KQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 729

Query: 501 KGL 503
           KGL
Sbjct: 730 KGL 732



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 173/408 (42%), Gaps = 79/408 (19%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L++        E   YV+   K   IELN+ S NF+L  L            +ED + 
Sbjct: 140 DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCL------------VEDNRV 187

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK--- 271
            GV                            +F+ +++ G  PN  T+  +++ FC+   
Sbjct: 188 DGVR--------------------------LLFEVLIKFGPRPNIHTYTIMMNFFCRGVG 221

Query: 272 -DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
              +I  A ++  ++   G    VVTY + I GLC  G    A  L   +       N  
Sbjct: 222 CSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNH 281

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             NA+I G C+  ++++A  +F ++   G+ P V +Y+ LID +C++GR++ A  +   M
Sbjct: 282 CFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG-- 448
            + G+LP++ +Y+ LI G  +EG V+    +  E+ N+G+   + +Y+IL+   C+ G  
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 449 ------------------------------KSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
                                         KSK+  + L E   M+K   WP+ +  N +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-----QIVREEMMEKG 521
           +  +C+K     A  L  +  E G+  N  +Y     +I R  + EK 
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKA 509



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 26/280 (9%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           V F+ LI  F  +  +  A  VF      GI   +++ N L+  L  D ++D    L + 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 320 MMASGLKPNVVTSNALINGFCK----KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           ++  G +PN+ T   ++N FC+       + +A  +   I   G +P+V+TY T I   C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G    A+ +  ++  +    +   +N +I GL + G ++    +  E+ N+G+   + 
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           +Y+IL+   C+ G+  +A  +  EM         PNI +Y++LI GFC++G+++ A    
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEM---RNSGILPNIYSYSILIDGFCKEGRVDKA---- 369

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
              LE            V EEM   G +PD+  +   I G
Sbjct: 370 ---LE------------VFEEMKNSGILPDVYSYSILIDG 394



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 8/278 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  + K +        F +    G+  +V +   L+   + + K +    ++K MK  R
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +  ++  ++ G C  G++ +A  + ++M   G SP VVTY   I+ Y K   + K  
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK---LNKNN 647

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSL 300
           +A  +++ M E G+ P+++ +  LI  FC    ++ A  +F+EM   G     VV Y  L
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           IN      K D+A  L +EM A GL     +  ++   +C +  V K   L    ++QGL
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGKL-GGRAKQGL 766

Query: 361 SPSV-ITYNTLIDAY-CKEGRMEDAFAMRNSMLDRGVL 396
                + Y  L D+  C   ++ D F  R  M +  + 
Sbjct: 767 DWRFQVKYTLLPDSCGCAHAQIHD-FYTRPFMQENNIF 803



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 16/206 (7%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  ++ + K  + +  FK   +  +    ++   L+      G+      ++ EM R 
Sbjct: 565 ILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSRE 624

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               N+ ++   +N   K  K N+A  + E MK  GV P  + Y +LI  +C     G+M
Sbjct: 625 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFC---NTGEM 681

Query: 241 YKADAVFKDMVENG-ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            +A+A+F +M + G   PN V +  LI+ + K      A K++EEM + G++        
Sbjct: 682 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSR------- 734

Query: 300 LINGLC-VDGKLDEAVALRDEMMASG 324
               LC  +G + E+   R +++ +G
Sbjct: 735 ----LCSSEGSVSESWCCRHQVLKTG 756



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           K NVV  + LI  F    ++E A  +F    + G+  ++++ N L+    ++ R++    
Sbjct: 134 KSNVVF-DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRL 192

Query: 386 MRNSMLDRGVLPDVSTY----NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +   ++  G  P++ TY    N    G+    ++     I+ ++  +G    +VTY   +
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 252

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
             LCK G    A  L+  + +    K  P N   +N +I G CQ G L++A+ +  E+  
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCR----KNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKN 308

Query: 501 KGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
            G++P+  +Y I                V +EM   G +P+I  +   I G
Sbjct: 309 SGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDG 359


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 196/354 (55%), Gaps = 7/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  + +   F+ V+ +  E++ + + +N   +N +L+ L K  ++++A  + ++   + 
Sbjct: 114 LVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQ 173

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P   T+NILI G C+ GG+ + ++   VFKDM   G LP+ VT+NTLI+G CK   + 
Sbjct: 174 SPPDTWTFNILIRGLCRVGGVDRAFE---VFKDMESFGCLPDVVTYNTLINGLCKANEVQ 230

Query: 277 AAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
              ++F+E+ S    +  +VTY S+I+G C  GK+ EA  L +EMM SG++PNV+T N L
Sbjct: 231 RGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVL 290

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+GF K   + +A  ++  ++    S  V+T+ +LID YC+ G++       N M  R V
Sbjct: 291 IDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNV 350

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            P V TY  LI  L +E  +   R+ + ++ N+ +      YN ++   CK G   +   
Sbjct: 351 SPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNV 410

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +L E   ME+++  P+ VT+ +LI G C KG++ +A  + N +L     P+  T
Sbjct: 411 ILKE---MEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNIT 461



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 182/347 (52%), Gaps = 7/347 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  LVK+ +  +  Y++KE    +   +  +FN ++ GLC+ G +++A ++ +DM+S
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMES 206

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNTLIDGFCKDE 273
            G  P VVTYN LI+G CK     ++ +   +FK++   +   P+ VT+ ++I GFCK  
Sbjct: 207 FGCLPDVVTYNTLINGLCKAN---EVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSG 263

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A  +FEEM   GI   V+T+N LI+G    G + EA A+  +M       +VVT  
Sbjct: 264 KMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFT 323

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           +LI+G+C+   V      ++ +  + +SP+V TY  LI+A CKE R+ +A      + + 
Sbjct: 324 SLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNS 383

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            ++P    YN +I G  + GNV+    I+ E+         VT+ IL+   C  G+  +A
Sbjct: 384 SIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEA 443

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +++ + M      +  P+ +T N LI    + G   +A  +    LE
Sbjct: 444 INIFNRML---ATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 4/340 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NS + + L+   VK  + H     FK            + N L+R L + G  +    V+
Sbjct: 142 NSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVF 201

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCK 233
           K+M+      ++ ++N ++NGLCKA ++ +  ++ ++++S    SP +VTY  +I G+CK
Sbjct: 202 KDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCK 261

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G   KM +A  +F++M+ +GI PN +TFN LIDGF K  NI+ A  ++ +M     +A 
Sbjct: 262 SG---KMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSAD 318

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVT+ SLI+G C  G+++  +   + M    + P V T   LIN  CK+  + +AR    
Sbjct: 319 VVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLG 378

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            I    + P    YN +ID +CK G +++   +   M ++   PD  T+  LI G   +G
Sbjct: 379 QIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKG 438

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            +    NI N ++        +T N L+  L K G   +A
Sbjct: 439 RMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEA 478



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 169/361 (46%), Gaps = 11/361 (3%)

Query: 166 KFEDVEYVYKEMKRRRIELNLD----SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
           +F + +  +K ++  R+ LN++    ++N ++  LC+ G  +  + + + M S G  P  
Sbjct: 49  RFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDS 108

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                L+    +      + K   +  ++    +  N   +N L+    K   +  A+ +
Sbjct: 109 KLLGFLVTWMAQASDFDMVKK---LLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYL 165

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F+E           T+N LI GLC  G +D A  +  +M + G  P+VVT N LING CK
Sbjct: 166 FKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCK 225

Query: 342 KKLVEKARVLFDDI-SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
              V++   LF +I S    SP ++TY ++I  +CK G+M++A  +   M+  G+ P+V 
Sbjct: 226 ANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVI 285

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           T+N LI G  + GN+     +  ++      A +VT+  L+   C+ G+    +   +  
Sbjct: 286 TFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWN-- 343

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             M+     P + TY VLI   C++ +L +A   L ++    +IP    Y  V +   + 
Sbjct: 344 -VMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402

Query: 521 G 521
           G
Sbjct: 403 G 403


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 235/508 (46%), Gaps = 17/508 (3%)

Query: 18  NHHWS----KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
           N  WS    +L  TDPN +I  L      P +  R+F W  ++     S      +L   
Sbjct: 70  NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLE-- 127

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           ++A+    + S  ++  +      +  I   L   S        ++D+L+  Y K     
Sbjct: 128 ILAEN--DLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAE 185

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
               +F++    G   SV +CN +L+ L           VY+ M    I   + +FN +L
Sbjct: 186 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 245

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +   KAG L +   I  +MK   +    VTYNILI+G+ K G   KM +A     DM  +
Sbjct: 246 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG---KMEEARRFHGDMRRS 302

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G      +FN LI+G+CK      A  V +EM + GI     TYN  I  LC  G++D+A
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                E+++S   P+VV+ N L++G+ K     +A +LFDD+    + PS++TYNTLID 
Sbjct: 363 ----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ G +E A  ++  M  + + PDV TY  L+ G  + GN+     + +E++  G++  
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
              Y        + G S KA  L +EM   +     P++  YNV I G C+ G L  A  
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIE 536

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
              ++   GL+P+  TY  V    +E G
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENG 564



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 208/418 (49%), Gaps = 46/418 (11%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++G+  +V++ N +L +  K G  E V+ ++ EMKRR IE +  ++N ++NG  K GK+ 
Sbjct: 231 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 290

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A     DM+  G +    ++N LI+GYCK+G     +    V  +M+  GI P   T+N
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW---GVTDEMLNAGIYPTTSTYN 347

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
             I   C    I  A ++   M     A  VV+YN+L++G    GK  EA  L D++ A 
Sbjct: 348 IYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + P++VT N LI+G C+   +E A+ L ++++ Q + P VITY TL+  + K G +  A
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463

Query: 384 FAMRNSMLDRGV------------------------------------LPDVSTYNCLIA 407
             + + ML +G+                                     PD++ YN  I 
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL + GN+        ++   G+    VTY  ++    ++G+ K A +L DEM +   ++
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR---KR 580

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            +P+++TY VLI G  + G+LE A     E+ ++G+ PN  T+  +   M + G I +
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 195/381 (51%), Gaps = 14/381 (3%)

Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           EA +  GD    G   +  S N L+    K+G F+D   V  EM    I     ++N  +
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
             LC  G+++ A +++  M     +P VV+YN L+ GY K   +GK  +A  +F D+   
Sbjct: 351 CALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIK---MGKFVEASLLFDDLRAG 403

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            I P+ VT+NTLIDG C+  N+  A ++ EEM +  I   V+TY +L+ G   +G L  A
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLID 372
             + DEM+  G+KP+         G  +    +KA  L ++ ++    +P +  YN  ID
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             CK G +  A   +  +   G++PD  TY  +I G    G  +  RN+ +E++   +  
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            ++TY +L+    K G+ ++A     EM   +K    PN++T+N L+ G C+ G +++A 
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEM---KKRGVRPNVMTHNALLYGMCKAGNIDEAY 640

Query: 493 GLLNELLEKGLIPNQTTYQIV 513
             L ++ E+G+ PN+ +Y ++
Sbjct: 641 RYLCKMEEEGIPPNKYSYTML 661



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 173/331 (52%), Gaps = 7/331 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S N L+   +K GKF +   ++ +++   I  ++ ++N +++GLC++G L  A  + E
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M +  + P V+TY  L+ G+ K G +     A  V+ +M+  GI P+   + T   G  
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSM---ATEVYDEMLRKGIKPDGYAYTTRAVGEL 490

Query: 271 KDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           +  +   A ++ EEM  +   A  +  YN  I+GLC  G L +A+  + ++   GL P+ 
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   +I G+ +    + AR L+D++  + L PSVITY  LI  + K GR+E AF     
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  RGV P+V T+N L+ G+ + GN++     + ++   G+     +Y +L+   C   K
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            ++ V L  EM   E E   P+  T+  L K
Sbjct: 671 WEEVVKLYKEMLDKEIE---PDGYTHRALFK 698



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 25/302 (8%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+ M+  G LP+    N ++        ++ A  V+E M  HGI   V+T+N++++    
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+    +  EM    ++ + VT N LINGF K   +E+AR    D+   G + +  +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N LI+ YCK+G  +DA+ + + ML+ G+ P  STYN  I  L   G ++  R    EL+
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELL 366

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           ++     +V+YN L+    K GK  +A  L D++   +     P+IVTYN LI G C+ G
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH---PSIVTYNTLIDGLCESG 423

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHM 530
            LE A  L  E+  + + P+  TY                  V +EM+ KG  PD  G+ 
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD--GYA 481

Query: 531 YN 532
           Y 
Sbjct: 482 YT 483



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 18/353 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM- 123
            R L S + A       + +H ++K GKF   S +F  L       S+   + +ID L  
Sbjct: 362 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421

Query: 124 ---LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
              L   + +K  +  +         +   V++   L++  VK G       VY EM R+
Sbjct: 422 SGNLEGAQRLKEEMTTQL--------IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGK 239
            I+ +  ++     G  + G  +KA  + E+M +    +P +  YN+ IDG CK   +G 
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK---VGN 530

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + KA    + +   G++P+ VT+ T+I G+ ++     A  +++EM    +   V+TY  
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI G    G+L++A     EM   G++PNV+T NAL+ G CK   +++A      + E+G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + P+  +Y  LI   C   + E+   +   MLD+ + PD  T+  L   L ++
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 214/426 (50%), Gaps = 41/426 (9%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           +E F      G+  SV++ N L+ A   +G       V+ +M  RRI+ N+ ++  ++  
Sbjct: 158 WELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICA 217

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LC+   +  A  +  +MK  G+ P + TYN L+  + K+  I     A   + D+++ G+
Sbjct: 218 LCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH---ALVFYYDLLKCGL 274

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +PN+V F TLIDG C+   I+ A  +F +M  + +A  V  YNSLI+G    G   EA+A
Sbjct: 275 VPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALA 334

Query: 316 LRDEMMASGLKP-----------------------------------NVVTSNALINGFC 340
              E++  GL+P                                   N    N LI+ +C
Sbjct: 335 FFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYC 394

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +++A V    +SE G+ P+V+TY++LID + K G ME A A+   M+ +GV P+V 
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 454

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  LI G ++ G+++    +  E+   G+ +  +T ++LV  LC++ + + AV  + E 
Sbjct: 455 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 514

Query: 461 FKMEKEKKWPNI---VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
              +K +K P+I   VTY  LI G    G+  +A    + + + G++P++ TY +V   +
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 518 MEKGFI 523
              G++
Sbjct: 575 CMLGYV 580



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 44/366 (12%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ ++ + N L+ +  K    +     Y ++ +  +  N   F  +++GLC+
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQ 290

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A ++ +A +I  DM    V+P V  YN LI G  + G      +A A F++++  G+ P+
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSG---YAQEALAFFQEIIRKGLRPD 347

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T + ++ G C    +  A +  E M   GIA     YN LI+  C  G LDEA+    
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M   G++PNVVT ++LI+G  K   +E A  ++ ++  +G+ P+V+TY  LI  + K G
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE-GVRNIM--------------- 422
            M+ AF ++  M ++G+  +  T + L+ GL RE  V+  VR IM               
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 423 ------------------NE-------LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
                             NE       + ++GM     TY +++  LC  G    A+ L 
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587

Query: 458 DEMFKM 463
            +M K+
Sbjct: 588 ADMVKV 593



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 15/316 (4%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           Y +  +V   N L+    + G  ++    ++E+ R+ +  +  + + V+ GLC  G++  
Sbjct: 307 YEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQV 366

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+  +E M+  G++     YN+LID YCK G + +   A      M E G+ PN VT+++
Sbjct: 367 ATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE---ALVTCTRMSEVGVEPNVVTYSS 423

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LIDG  K+  +  AM ++ EM + G+   VVTY +LI+G   +G +D A  L+ EM   G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS---PSV---ITYNTLIDAYCKEG 378
           +  N +T + L++G C++  V+ A     + S Q  S   PS+   +TY TLI     +G
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDG 543

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           +  +A    + M D G++PD  TY  +I GL   G V     +  ++V  G++       
Sbjct: 544 QYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP------ 597

Query: 439 ILVGALCKDGKSKKAV 454
                +C D  S+++V
Sbjct: 598 TKCAMVCPDIWSRESV 613



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 149/345 (43%), Gaps = 57/345 (16%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A +VF  + E   LP     N ++DG  K   ++   ++F+EM   G+   VVTYN+LI
Sbjct: 124 EALSVFGRLRELPALP---ACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI 180

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N     G + +A  + D+M+A  + PNVVT   +I   C++  +  A  LF ++ E G+ 
Sbjct: 181 NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMR 240

Query: 362 PSVITYN-----------------------------------TLIDAYCKEGRMEDAFAM 386
           P++ TYN                                   TLID  C+  R+ +A  +
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI 300

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M    V P V  YN LI G  R G  +       E++  G+R    T +I+V  LC 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD 360

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
            G+ + A   L+    M++     N   YNVLI  +C+ G L++A      + E G+ PN
Sbjct: 361 GGQMQVATRFLE---VMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPN 417

Query: 507 QTTYQ----------------IVREEMMEKGFIPDIEGHMYNISG 535
             TY                  +  EM+ KG  P++  +   I G
Sbjct: 418 VVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHG 462



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G++ +V++ + L+    K G+ E    +Y EM  + +E N+ ++  +++G  K G
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
            ++ A  + ++M+  G+    +T ++L+DG C++  +    +    +   K   +N  + 
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N VT+ TLI G   D   + A   F  M   G+     TY  +I GLC+ G +  A+ L 
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587

Query: 318 DEMMASGLKPN 328
            +M+  G+KP 
Sbjct: 588 ADMVKVGVKPT 598


>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
 gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
          Length = 578

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 250/514 (48%), Gaps = 18/514 (3%)

Query: 6   NSTIEDITELIRNHHW---------SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE 56
           N  ++ +  ++   HW         S L +   + ++L+L    + P L   +F W    
Sbjct: 2   NLLVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELI 61

Query: 57  LRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
               HSL  +  ++  L   K +   +  L   + +  F S   + +AL T  D+   N+
Sbjct: 62  PDYKHSLQSSWAMIFILTEHKHFKTAQGLLEK-IAHKDFISSPLVLNALVTSYDNPDVNA 120

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
            I+  LM+ YV    P    +  +    +G K ++ +C  LL +L K+   + V   YK+
Sbjct: 121 HILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKK 180

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M R  +  N+  +N +++  CK+G + KA  ++ +M+   V P + TYN LI  Y +K  
Sbjct: 181 MIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRK-- 238

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
               Y+A  V   M   G+ P+ VT+N+LI GFCK+  +  A+K+F E+    ++   VT
Sbjct: 239 -SLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKD--VSPNHVT 295

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y +LI+G C     +EA+ L   M A GL   V T N+++   C++  +  A  L +++ 
Sbjct: 296 YTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMG 355

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E+ + P  +T NTLI+AYCK G M+ A  +++ MLD G+  D  TY  LI G     ++E
Sbjct: 356 ERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDME 415

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
             + ++  +++ G+  G  TY+ LV   C+ G     +SLLDE      +    ++    
Sbjct: 416 SAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFL---TKGYCVDLSVCR 472

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            LI+  C + ++  A  + + +  +G+  +   Y
Sbjct: 473 ALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIY 506



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 8/317 (2%)

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A  ++E M+  G  P +    +L++   K      ++K+   +K M+  G++PN   +N 
Sbjct: 139 AIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKS---YKKMIRVGVVPNIHIYNV 195

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI   CK  ++  A ++  EM    +   + TYN+LI+         EA+ ++D M  +G
Sbjct: 196 LIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAG 255

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P++VT N+LI GFCK+  + +A  LF +I +  +SP+ +TY TLID YC+    E+A 
Sbjct: 256 VSPDIVTYNSLIYGFCKEGKMREAVKLFREIKD--VSPNHVTYTTLIDGYCRVNDFEEAL 313

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +G+   V+TYN ++  L  EG +     ++NE+    +    VT N L+ A 
Sbjct: 314 RLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAY 373

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G  K A+ +  +M     +    +  TY  LI GFC    +E A  LL  +L+ GL 
Sbjct: 374 CKIGDMKSALKVKSKMLDAGLQ---LDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLS 430

Query: 505 PNQTTYQIVREEMMEKG 521
           P   TY  + +   E G
Sbjct: 431 PGYCTYSWLVDGYCELG 447



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 3/259 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+    +   FE+   + K M+ + + L + ++N VL  LC+ G++  A+ ++ +M    
Sbjct: 299 LIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERK 358

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V P  VT N LI+ YCK   IG M  A  V   M++ G+  +  T+  LI GFC   ++ 
Sbjct: 359 VEPDNVTCNTLINAYCK---IGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDME 415

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           +A ++   M   G++ G  TY+ L++G C  G     ++L DE +  G   ++    ALI
Sbjct: 416 SAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALI 475

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C ++ V  A  ++  +  +G+S   + Y +L  AY K+G+      M + M  R +L
Sbjct: 476 RRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLL 535

Query: 397 PDVSTYNCLIAGLSREGNV 415
            ++  Y C  A      ++
Sbjct: 536 INLKLYRCFNASYGPHNSI 554



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 5/215 (2%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +A+ + + M   G KPN+     L+N   K +L +     +  +   G+ P++  YN L
Sbjct: 137 QDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVL 196

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I A CK G +E A  +   M  + V PD+ TYN LI+  SR+        + + +   G+
Sbjct: 197 IHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGV 256

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
              +VTYN L+   CK+GK ++AV L  E+  +      PN VTY  LI G+C+    E+
Sbjct: 257 SPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVS-----PNHVTYTTLIDGYCRVNDFEE 311

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           A  L   +  KGL     TY  V  ++ E+G I D
Sbjct: 312 ALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRD 346


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 204/379 (53%), Gaps = 13/379 (3%)

Query: 127 VKNMK-PHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           ++N+K P L    FK A      + +V + N  L ALVK G       ++ +M  +    
Sbjct: 11  LENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLP 70

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ ++  VL GLC   K + A ++++DM+S  ++P     N+L+   CK G +   Y+  
Sbjct: 71  NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYE-- 128

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++K + +   L + +++N L  G CK + I  A+ VF EM  + +   ++TYN L+ G 
Sbjct: 129 -LYKRLSDECSL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186

Query: 305 CVDGKLDEAVALRDEMM----ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           C  G++++A+ L +EM+     S + P++ + N +I+GFCK + +  AR +   + + G 
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           SP+V+T+NTL+D  C  G++++A AM   M++R   P   TY  LI G +R   ++   +
Sbjct: 247 SPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAND 306

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
              +++  G+   + TY  L+G LC   K + A+ +L  M    +E   PN+VTY  +I 
Sbjct: 307 YFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGRE---PNVVTYTRVIG 363

Query: 481 GFCQKGKLEDANGLLNELL 499
             C+ G++E A  L N+ +
Sbjct: 364 ALCKGGQIERATKLFNDAM 382



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 40/329 (12%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V TYN  ++   K GG G   KA  +F DM+    LPN  T+  ++ G C D    AA++
Sbjct: 37  VFTYNAYLNALVK-GGHGS--KARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALE 93

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + ++M S  +       N L++ LC +GK+D A  L  + ++     + ++ N L  G C
Sbjct: 94  LLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELY-KRLSDECSLDRISYNMLTYGLC 152

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD----RGVL 396
           K   +++A  +F ++ E  + PS++TYN L+  YC+ GRME A  +   M++      V+
Sbjct: 153 KADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVV 212

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN +I+G  +   +   R ++  ++ +G    +VT+N L+  LC  GK  +A ++
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAM 272

Query: 457 LDEM----------------------FKMEKEKKW----------PNIVTYNVLIKGFCQ 484
            + M                       +++K   +          PN+ TY  LI G C 
Sbjct: 273 FEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCD 332

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             K+EDA  +L  +   G  PN  TY  V
Sbjct: 333 ANKVEDALEILKRMSSTGREPNVVTYTRV 361



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 193/456 (42%), Gaps = 61/456 (13%)

Query: 33  ILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKN 92
           ++ +  +   P L  R F W+ ++    H++      L++LV      K R      +  
Sbjct: 7   VIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66

Query: 93  GKFTSVSTIFHAL-STCSDS----------------LCRNSIIIDMLMLAYVKNMKPHLG 135
               ++ T    L   C D+                L   + I++ML+    KN K    
Sbjct: 67  ECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAA 126

Query: 136 FEAFKRAGD-------------YGL---------------------KSSVLSCNQLLRAL 161
           +E +KR  D             YGL                       S+L+ N LL   
Sbjct: 127 YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186

Query: 162 VKEGKFEDVEYVYKEM----KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
            + G+ E    + +EM    K   +  ++ S+N V++G CKA +L  A  ++  M   G 
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP VVT+N L+DG C     GK+ +A+A+F+ MVE    P  VT+  LI G  +   I  
Sbjct: 247 SPNVVTFNTLLDGLCL---TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A   F +M   G+   V TY +LI GLC   K+++A+ +   M ++G +PNVVT   +I 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 338 GFCKKKLVEKARVLFDDI---SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
             CK   +E+A  LF+D          P    Y+T++   C++ +  +A+     M++  
Sbjct: 364 ALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESK 423

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ++     Y  +  GL      E V  +  E   +G+
Sbjct: 424 LVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 6/392 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G    +R  + G + S  +   ++     E K ++ E + +EM  + +   + +   V+N
Sbjct: 131 GLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 190

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK G+++ A  ++E MK  G  P V TYN L+ G+C +G   K++KA A+   M   G
Sbjct: 191 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVHKAMALLNKMRVCG 247

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+N LI G C D +I +A ++   M   G+ A   TYN+LIN LC DG+ D+A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L D +   G+KPN VT N+LING CK   V+ A    + +   G +P   TY++ I+  
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK    ++  +    ML + V P    Y  +I  L +E N   V     E+V++G    +
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY   + A C +G+  +A ++L E   M K     + + YN L+ G    G+ + A  +
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 484

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           L ++     +PNQ TY I+   ++    + D+
Sbjct: 485 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 516



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 23/402 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + GL   V++C  ++ A  KEG+  D   V + MK R  + N+ ++N ++ G 
Sbjct: 168 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 227

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C  GK++KA  ++  M+  GV+P  VTYN+LI G C  G I   ++   + + M  +G++
Sbjct: 228 CNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFR---LLRLMEGDGLI 284

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            ++ T+N LI+  CKD     A  +F+ + + GI    VT+NSLINGLC  GK+D A   
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKF 344

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+++G  P+  T ++ I   CK K  ++      ++ ++ + PS + Y  +I    K
Sbjct: 345 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 404

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           E            M+  G  PDV TY   +     EG +    N++ E+  NG+    + 
Sbjct: 405 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 464

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK---------------- 480
           YN L+      G++  AVS+L +M  +      PN  TY +L++                
Sbjct: 465 YNTLMDGHASIGQTDHAVSILKQMTSVASV---PNQFTYFILLRHLVRMRLVEDVLPLTP 521

Query: 481 -GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G  +  +L D  GL + + +   +PN  TY  + E   E G
Sbjct: 522 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDG 563



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 182/363 (50%), Gaps = 10/363 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++R+L +             M R     +  +FN ++ G C+  +++ A D+ + M  
Sbjct: 15  NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +  VV+Y  LI+G+C+ G I +   A  +F +M +    P+   +  L+ G CK   
Sbjct: 75  RGFAQDVVSYAALIEGFCETGRIDE---AVELFGEMDQ----PDMHMYAALVKGLCKAGR 127

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
               + +   M   G       Y ++++  C + K  EA  +  EM   GL P VVT  A
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +IN +CK+  +  A  + + +  +G  P+V TYN L+  +C EG++  A A+ N M   G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V PD  TYN LI G   +G++E    ++  +  +G+ A   TYN L+ ALCKDG++ +A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           SL D    +E     PN VT+N LI G C+ GK++ A   L +++  G  P+  TY    
Sbjct: 308 SLFD---SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 515 EEM 517
           E +
Sbjct: 365 EHL 367



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/561 (21%), Positives = 248/561 (44%), Gaps = 78/561 (13%)

Query: 21  WSKLKNTDPNTVILQLFNSDADPVLI-----LRYFCWSTKELRASHSLLLTGRLLHSLVV 75
           W + K  +   ++ ++F     P ++     +  +C   KE R S +L    R+L  + +
Sbjct: 159 WER-KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC---KEGRMSDAL----RVLELMKL 210

Query: 76  AKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS---DSLCRNSIIIDMLMLAYVKN 129
               P + ++   +  F   GK      + + +  C    D++  N +I    +  ++++
Sbjct: 211 RGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIES 270

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                 F   +     GL +   + N L+ AL K+G+ +    ++  ++ R I+ N  +F
Sbjct: 271 -----AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 325

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-------IGKMYK 242
           N ++NGLCK+GK++ A   +E M S G +P   TY+  I+  CK  G       IG+M +
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385

Query: 243 ADA-------------------------VFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
            D                           + +MV +G  P+ VT+ T +  +C +  ++ 
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A  V  EM  +G+    + YN+L++G    G+ D AV++  +M +    PN  T   L+ 
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505

Query: 338 GFCKKKLVEKARVL-----------------FDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              + +LVE    L                 FD + +    P+  TY+++++ + ++GR 
Sbjct: 506 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 565

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+A ++ + M +  +  +   Y  L+    +         ++  ++ +G    L++Y  L
Sbjct: 566 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHL 625

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           +  L  +G++ KA     E+F   + K + P+ + + V+I G  +KG  + +  ++  L 
Sbjct: 626 LSGLICEGQTDKA----KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLE 681

Query: 500 EKGLIPNQTTYQIVREEMMEK 520
                P+  TY ++ EE+ ++
Sbjct: 682 RMNCRPSHQTYAMLTEELPDR 702



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 7/253 (2%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+N +I   C+  ++++A++    M   G      T+NSLI G C   ++D A  L D+M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
              G   +VV+  ALI GFC+   +++A  LF ++ +    P +  Y  L+   CK GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E+   M   M + G  P    Y  ++     E   +    ++ E+   G+   +VT   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + A CK+G+   A+ +L E+ K+   K  PN+ TYN L++GFC +GK+  A  LLN++  
Sbjct: 189 INAYCKEGRMSDALRVL-ELMKLRGCK--PNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245

Query: 501 KGLIPNQTTYQIV 513
            G+ P+  TY ++
Sbjct: 246 CGVNPDAVTYNLL 258



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 19/109 (17%)

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGL 494
           TYN ++ +LC+      A+  L  M +      W P+  T+N LI G+C+  +++ A  L
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVR----SGWRPDAYTFNSLIVGYCRTNQVDVARDL 68

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFI------------PDIEGHMY 531
            +++  +G   +  +Y  + E   E G I            PD+  HMY
Sbjct: 69  FDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM--HMY 115


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 213/397 (53%), Gaps = 9/397 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M +     N+ S+N +
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 193 LNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           L GLC   +  +A ++++ M   G    P VV+Y  +I+G+ K+G + K Y     + +M
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY---GTYHEM 225

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           ++ GILPN VT++++I   CK + +  AM+V   M  +G+     TYNS+++G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M + G++P+VVT N+L++  CK     +AR +FD ++++GL P + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  Y  +G + +   + + M+  G+ P+   ++ LI   +++G V+    + +++   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VTY  ++G LCK G+ + A+   ++M     E+  P  + YN LI   C   K + 
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L+ E+L++G+  +   +  + +   ++G + + E
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G        +H +      +  N +    ++ A  K        
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+  +  + N ++      G+ ++     K+M    +E ++ ++N +++ L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+  +A  + + M   G+ P++ TY  L+ GY  KG + +M+    +   MV NGI 
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIH 371

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN   F+ LI  + K   +  AM VF +M   G+    VTY ++I  LC  G++++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+   L P  +  N+LI+  C     +KA+ L  ++ ++G+    I +N++ID++CK
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGR+ ++  + + M+  GV PD+ TY+ LI G    G ++    ++  +V+ GM+   VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   CK  + + A+ L  E   ME     P+I+TYN++++G  Q  +   A  L  
Sbjct: 552 YNTLINGYCKISRMEDALVLFRE---MESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 497 ELLEKGLIPNQTTYQIV 513
            + E G     +TY I+
Sbjct: 609 GITESGTQLELSTYNII 625



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 53/485 (10%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++ +L  A+   K    L   VKNG   +  T              NSI+       Y  
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-------------NSIV-----HGYCS 281

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           + +P       K+    G++  V++ N L+  L K G+  +   ++  M +R ++  + +
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  +L G    G L +   +++ M   G+ P    ++ILI  Y K+G   K+ +A  VF 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG---KVDQAMLVFS 398

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M + G+ P+ VT+ T+I   CK   +  AM+ FE+M    ++ G + YNSLI+ LC+  
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K D+A  L  EM+  G+  + +  N++I+  CK+  V ++  LFD +   G+ P +ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YC  G+M++A  +  SM+  G+ PD  TYN LI G  +   +E    +  E+ ++
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAV----------------------------SLLDEM 460
           G+   ++TYNI++  L +  ++  A                             +L DE 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 461 FKMEKEKKWPNIV----TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +M +     ++     T+N++I    + G+ ++A  L   L   GL+P+  TY ++ E 
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 517 MMEKG 521
           ++E+G
Sbjct: 699 LIEQG 703



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  K+GK +    V+ +M+++ +  +  ++  V+  LCK+G++  A    E M    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  + YN LI   C      K  KA  +  +M++ GI  + + FN++ID  CK+  + 
Sbjct: 440 LSPGNIVYNSLIHSLCI---FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + K+F+ M   G+   ++TY++LI+G C+ GK+DEA  L   M++ G+KP+ VT N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+CK   +E A VLF ++   G+SP +ITYN ++    +  R   A  +   + + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++STYN ++ GL +    +    +   L    ++    T+NI++GAL K G++ +A  L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                 +      P++ TY+++ +   ++G LE+ + L   + E G   N      +  +
Sbjct: 677 FA---ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 517 MMEKGFIPDIEGHMYNI 533
           ++++G I     +++ I
Sbjct: 734 LLQRGDITRAGTYLFMI 750



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 179/351 (50%), Gaps = 11/351 (3%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           ILI   C  G +   +   A   ++++ G   + + F  L+ G C D+  S AM  V   
Sbjct: 96  ILIGSCCCAGRLDLGF---AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKK 342
           M   G    V +YN L+ GLC + +  EA+ L   M   G    P+VV+   +INGF K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++KA   + ++ ++G+ P+V+TY+++I A CK   M+ A  +  SM+  GV+P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  + D    
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD---S 329

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M K    P I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 13/306 (4%)

Query: 232 CKKGGIGKMYKADAV--FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           C    + +   A AV  +  M   G   + PN  T+  LI   C    +         + 
Sbjct: 59  CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVI 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKL 344
             G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177

Query: 345 VEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++A  L   + + G    P V++Y T+I+ + KEG ++ A+   + MLDRG+LP+V TY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +IA L +   ++    ++  +V NG+     TYN +V   C  G+ K+A+  L    K
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK---K 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTYN L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 355 LVEMHG 360



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 29/347 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +RYF     E R S   ++   L+HSL +  K+ K +  +   +  G    + TIF   +
Sbjct: 429 MRYFEQMIDE-RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIF--FN 483

Query: 107 TCSDSLCRNSIIID---MLMLAYVKNMKPHL--------GF-------EAFKRAGDY--- 145
           +  DS C+   +I+   +  L     +KP +        G+       EA K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++ N L+    K  + ED   +++EM+   +  ++ ++N +L GL +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G   ++ TYNI++ G CK     +  +   +F+++    +     TFN +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR---MFQNLCLTDLQLETRTFNIM 660

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K      A  +F  + ++G+   V TY+ +   L   G L+E   L   M  +G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             N    N+++    ++  + +A      I E+  S    T +  +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 213/397 (53%), Gaps = 9/397 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M +     N+ S+N +
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 193 LNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           L GLC   +  +A ++++ M   G    P VV+Y  +I+G+ K+G + K Y     + +M
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY---GTYHEM 225

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           ++ GILPN VT++++I   CK + +  AM+V   M  +G+     TYNS+++G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M + G++P+VVT N+L++  CK     +AR +FD ++++GL P + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  Y  +G + +   + + M+  G+ P+   ++ LI   +++G V+    + +++   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VTY  ++G LCK G+ + A+   ++M     E+  P  + YN LI   C   K + 
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L+ E+L++G+  +   +  + +   ++G + + E
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G        +H +      +  N +    ++ A  K        
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+  +  + N ++      G+ ++     K+M    +E ++ ++N +++ L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+  +A  + + M   G+ P++ TY  L+ GY  KG + +M+    +   MV NGI 
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIH 371

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN   F+ LI  + K   +  AM VF +M   G+    VTY ++I  LC  G++++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+   L P  +  N+LI+  C     +KA+ L  ++ ++G+    I +N++ID++CK
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGR+ ++  + + M+  GV PD+ TY+ LI G    G ++    ++  +V+ GM+   VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   CK  + + A+ L  E   ME     P+I+TYN++++G  Q  +   A  L  
Sbjct: 552 YNTLINGYCKISRMEDALVLFRE---MESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 497 ELLEKGLIPNQTTYQIV 513
            + E G     +TY I+
Sbjct: 609 GITESGTQLELSTYNII 625



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 53/485 (10%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++ +L  A+   K    L   VKNG   +  T              NSI+       Y  
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-------------NSIV-----HGYCS 281

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           + +P       K+    G++  V++ N L+  L K G+  +   ++  M +R ++  + +
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  +L G    G L +   +++ M   G+ P    ++ILI  Y K+G   K+ +A  VF 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG---KVDQAMLVFS 398

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M + G+ P+ VT+ T+I   CK   +  AM+ FE+M    ++ G + YNSLI+ LC+  
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K D+A  L  EM+  G+  + +  N++I+  CK+  V ++  LFD +   G+ P +ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YC  G+M++A  +  SM+  G+ PD  TYN LI G  +   +E    +  E+ ++
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAV----------------------------SLLDEM 460
           G+   ++TYNI++  L +  ++  A                             +L DE 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 461 FKMEKEKKWPNIV----TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +M +     ++     T+N++I    + G+ ++A  L   L   GL+P+  TY ++ E 
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 517 MMEKG 521
           ++E+G
Sbjct: 699 LIEQG 703



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  K+GK +    V+ +M+++ +  +  ++  V+  LCK+G++  A    E M    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  + YN LI   C      K  KA  +  +M++ GI  + + FN++ID  CK+  + 
Sbjct: 440 LSPGNIVYNSLIHSLCI---FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + K+F+ M   G+   ++TY++LI+G C+ GK+DEA  L   M++ G+KP+ VT N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+CK   +E A VLF ++   G+SP +ITYN ++    +  R   A  +   + + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++STYN ++ GL +    +    +   L    ++    T+NI++GAL K G++ +A  L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                 +      P++ TY+++ +   ++G LE+ + L   + E G   N      +  +
Sbjct: 677 F---AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 517 MMEKGFIPDIEGHMYNI 533
           ++++G I     +++ I
Sbjct: 734 LLQRGDITRAGTYLFMI 750



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 180/351 (51%), Gaps = 11/351 (3%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           ILI   C  G +   +   A   ++++ G   + + F  L+ G C D+  S AM  V   
Sbjct: 96  ILIGSCCCAGRLDLGF---AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKK 342
           M   G    V +YN L+ GLC + +  EA+ L   M   G    P+VV+   +INGF K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++KA   + ++ ++G+ P+V+TY+++I A CK   M+ A  +  SM+  GV+P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  + D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
              +   P I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 333 RGLK---PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 13/306 (4%)

Query: 232 CKKGGIGKMYKADAV--FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           C    + +   A AV  +  M   G   + PN  T+  LI   C    +         + 
Sbjct: 59  CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVI 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKL 344
             G     + +  L+ GLC D +  +A  + LR  M   G  PNV + N L+ G C +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDENR 177

Query: 345 VEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++A  L   + + G    P V++Y T+I+ + KEG ++ A+   + MLDRG+LP+V TY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +IA L +   ++    ++  +V NG+     TYN +V   C  G+ K+A+  L    K
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK---K 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTYN L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 355 LVEMHG 360



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 29/347 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +RYF     E R S   ++   L+HSL +  K+ K +  +   +  G    + TIF   +
Sbjct: 429 MRYFEQMIDE-RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIF--FN 483

Query: 107 TCSDSLCRNSIIID---MLMLAYVKNMKPHL--------GF-------EAFKRAGD---Y 145
           +  DS C+   +I+   +  L     +KP +        G+       EA K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++ N L+    K  + ED   +++EM+   +  ++ ++N +L GL +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G   ++ TYNI++ G CK     +  +   +F+++    +     TFN +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR---MFQNLCLTDLQLETRTFNIM 660

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K      A  +F  + ++G+   V TY+ +   L   G L+E   L   M  +G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             N    N+++    ++  + +A      I E+  S    T +  +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 199/358 (55%), Gaps = 12/358 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+RA    G+ +    + +EM+++  +      +NF ++ LCK+GK+ +A +++++MK  
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
              P VVT+N LI G CK G   ++ +A  V  +M  +G   N VT+NTLI+G       
Sbjct: 84  ACKPDVVTFNTLIAGLCKAG---RLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPNVVTSNA 334
             A+ V + M +        TYN++I+G C  G++D A    +EM   +G  P+  T + 
Sbjct: 141 GEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197

Query: 335 LINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           LING CK   + KA  L  + I  +    SV+ +NTL+D YCK   ++ A  + +SML+ 
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  PDV TY+ +I GL R G+V+    ++ ++V+ G +  +VTY +LV  LCK GK  +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
             L+  M    ++   PN VTY+++  G C+  KL+ AN LL  + +KG I +   ++
Sbjct: 318 CRLVKRML---EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFE 372



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 179/329 (54%), Gaps = 12/329 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           ++  ++   C AG+L  A D++ +M +  G++P    YN  +   CK G   K+ +A  V
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSG---KVPEAMEV 76

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            K+M +    P+ VTFNTLI G CK   +  A +V +EM   G AA +VTYN+LINGL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVI 365
            G+  EAV +   M  +   P+  T NA+I+GFCK   +++A    +++ ++ G SP   
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           TY+ LI+  CK   +  A  +   M+ R      V  +N L+ G  +  +++  R +++ 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++ +G    +VTY+ ++  LC+ G   K  +LL+   KM      P++VTY VL+ G C+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE---KMVSRGCKPDVVTYTVLVTGLCK 310

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            GK+ +A  L+  +LE G  PN  TY +V
Sbjct: 311 AGKMVEACRLVKRMLEDGCTPNAVTYSLV 339



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 11/327 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  + AL K GK  +   V K MK    + ++ +FN ++ GLCKAG+L++A  ++++M+ 
Sbjct: 58  NFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER 117

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +  +VTYN LI+G    G  G+   A  V + M      P+  T+N +I GFCK   
Sbjct: 118 SGFAANLVTYNTLINGLSSAGRSGE---AVLVMQGMTTT---PDTQTYNAIIHGFCKSGE 171

Query: 275 ISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKPNVVTS 332
           I  A    EEM    G +    TY+ LINGLC    L +A  L  EM+       +VV  
Sbjct: 172 IDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L++G+CK + +++AR L   + E G +P V+TY+T+ID  C+ G ++  FA+   M+ 
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS 291

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  PDV TY  L+ GL + G +     ++  ++ +G     VTY+++   LCK  K   
Sbjct: 292 RGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDM 351

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           A  LL     +  + +  ++V +  L+
Sbjct: 352 ANDLLTS---IRDKGRITDVVAFEALL 375



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 8/319 (2%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K+ K     E  K   D   K  V++ N L+  L K G+ ++ + V  EM+R     
Sbjct: 63  ALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           NL ++N ++NGL  AG+  +A  +M+ M +   +P   TYN +I G+CK G I + Y   
Sbjct: 123 NLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAY--- 176

Query: 245 AVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLIN 302
              ++M +  G  P+  T++ LI+G CK  N+  A ++ +EM G     A VV +N+L++
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C    LD A  L   M+  G  P+VVT + +I+G C+   V+K   L + +  +G  P
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V+TY  L+   CK G+M +A  +   ML+ G  P+  TY+ +  GL +   ++   +++
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356

Query: 423 NELVNNGMRAGLVTYNILV 441
             + + G    +V +  L+
Sbjct: 357 TSIRDKGRITDVVAFEALL 375



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 12/302 (3%)

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKV 281
           TY +L+  +C  G   ++  A  + ++M +  G+ P    +N  +   CK   +  AM+V
Sbjct: 20  TYFVLVRAHCLAG---ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            + M        VVT+N+LI GLC  G+LDEA  + DEM  SG   N+VT N LING   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVS 400
                +A ++   ++    +P   TYN +I  +CK G ++ A+     M  R G  PD  
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           TY+ LI GL +  N+     ++ E++      A +V +N LV   CK     +A  LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M +       P++VTY+ +I G C+ G ++    LL +++ +G  P+  TY ++   + +
Sbjct: 254 MLE---HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 520 KG 521
            G
Sbjct: 311 AG 312



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 23/293 (7%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           T+  L+   C    + AAM +  EM    G+A     YN  ++ LC  GK+ EA+ +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M     KP+VVT N LI G CK   +++A+ + D++   G + +++TYNTLI+     GR
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYN 438
             +A  +   M      PD  TYN +I G  + G ++     + E+    G      TY+
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+  LCK    +KA  LL EM  + ++    ++V +N L+ G+C+   L+ A  LL+ +
Sbjct: 197 ILINGLCKSSNLRKADELLQEM--IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254

Query: 499 LEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
           LE G  P+  TY  +                 E+M+ +G  PD+  +   ++G
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 5/204 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNK 204
           G      + + L+  L K       + + +EM  R+    ++ +FN +++G CKA  L++
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR 246

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A +++  M   G +P VVTY+ +IDG C+ G + K +   A+ + MV  G  P+ VT+  
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF---ALLEKMVSRGCKPDVVTYTV 303

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G CK   +  A ++ + M   G     VTY+ + +GLC   KLD A  L   +   G
Sbjct: 304 LVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363

Query: 325 LKPNVVTSNALINGFCKKKLVEKA 348
              +VV   AL+    KK+L+++A
Sbjct: 364 RITDVVAFEALLLSV-KKRLLDRA 386



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAV 454
           L D  TY  L+      G ++   +++ E+    GM      YN  V ALCK GK  +A+
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            ++     M+     P++VT+N LI G C+ G+L++A  +L+E+   G   N  TY
Sbjct: 75  EVVK---NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTY 127


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 214/406 (52%), Gaps = 22/406 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V + N ++  + KEG       ++++MK+  +  ++ ++N +++G  K G L+++
Sbjct: 127 GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDES 186

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+MK +G  P V+TYN LI+ +CK  G   M +A   F++M +  + PN ++++TL
Sbjct: 187 VCLFEEMKFMGCEPDVITYNALINSFCKFKG---MLRAFEFFREMKDKDLKPNVISYSTL 243

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           ID  CK+  +  A+K F +M   G+     TY+SLI+  C  G L EA  L DEM+   +
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
             N+VT   L++G C++ ++ +A  LF  + + G++P++  Y  LI  + K   M+ A  
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + N M ++ + PD+  +  ++ GL  E  +E  + IM E+  +G+ A  V Y  L+ A  
Sbjct: 364 LFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF 423

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G   +A++LL+EM  +  E     +VT+  LI G C++G +++A      + +  L P
Sbjct: 424 KAGNRTEAINLLEEMRDLGTE---VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 506 NQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           N   Y                  + +EM +K  IPD   +   I G
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDG 526



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 197/374 (52%), Gaps = 6/374 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            FE F+   D  LK +V+S + L+ AL KEG  +     + +M R  +  N  +++ +++
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CKAG L +A  + ++M    V   +VTY  L+DG C++G    M +A+ +F+ M + G
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG---MMNEAEELFRAMGKAG 337

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN   +  LI G  K  ++  AM++F EM    I   ++ + +++ GLC + KL+E  
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  EM  SG+  N V    L++ + K     +A  L +++ + G   +V+T+  LID  
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK G +++A      M D  + P+V+ Y  LI GL +   +   + + +E+ +  M    
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDK 517

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           + Y  ++    K G  ++A+++ ++M +M  E    ++  Y  L+ G  Q G+++ A   
Sbjct: 518 IAYTAMIDGNLKHGNFQEALNMRNKMMEMGIEL---DLYAYTSLVWGLSQCGQVQQARKF 574

Query: 495 LNELLEKGLIPNQT 508
           L E++ KG+IP++T
Sbjct: 575 LAEMIGKGIIPDET 588



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/319 (35%), Positives = 172/319 (53%), Gaps = 8/319 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ + + L + G L  A      M    V PK  + N  +     K G G + +    F+
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLH-RLSKAGEGDLSRD--FFR 121

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           DMV  GI P   T+N +I   CK+ ++  A  +FE+M   G+   +VTYN+LI+G    G
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            LDE+V L +EM   G +P+V+T NALIN FCK K + +A   F ++ ++ L P+VI+Y+
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLIDA CKEG M+ A      M   G+LP+  TY+ LI    + GN+     + +E++  
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGK 487
            +   +VTY  L+  LC++G   +A    +E+F+ M K    PN+  Y  LI G  +   
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEA----EELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 488 LEDANGLLNELLEKGLIPN 506
           ++ A  L NE+ EK + P+
Sbjct: 358 MDKAMELFNEMREKDIKPD 376



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 41/355 (11%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           ++++   LL  L +EG   + E +++ M +  +  NL ++  +++G  K   ++KA ++ 
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            +M+   + P ++ +  ++ G C +    K+ +   +  +M E+GI  N V + TL+D +
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSES---KLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K  N + A+ + EEM   G    VVT+ +LI+GLC  G + EA+     M    L+PNV
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
               ALI+G CK   +  A+ LFD++ ++ + P  I Y  +ID   K G  ++A  MRN 
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M++ G+  D+  Y  L+ GLS+ G V+  R  + E++  G+                   
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGI------------------- 583

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                               P+      L++   + G +++A  L NEL+EKGLI
Sbjct: 584 -------------------IPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 3/297 (1%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+  G  G+  ++ +   L+   +K    +    ++ EM+ + I+ ++  +  ++ GL
Sbjct: 328 ELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGL 387

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C   KL +   IM +MK  G+    V Y  L+D Y K G      +A  + ++M + G  
Sbjct: 388 CSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG---NRTEAINLLEEMRDLGTE 444

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
              VTF  LIDG CK   +  A+  F  M  H +   V  Y +LI+GLC +  + +A  L
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DEM    + P+ +   A+I+G  K    ++A  + + + E G+   +  Y +L+    +
Sbjct: 505 FDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQ 564

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            G+++ A      M+ +G++PD +    L+      GN++    + NELV  G+  G
Sbjct: 565 CGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHG 621



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 138/275 (50%), Gaps = 3/275 (1%)

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N  +P    F+ L     +   + AA + F  M    +     + N+ ++ L   G+ D 
Sbjct: 56  NVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDL 115

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           +     +M+ +G+ P V T N +I   CK+  +  AR LF+ + + GL+P ++TYNTLID
Sbjct: 116 SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            Y K G ++++  +   M   G  PDV TYN LI    +   +        E+ +  ++ 
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +++Y+ L+ ALCK+G  + A+    +M ++      PN  TY+ LI   C+ G L +A 
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRV---GLLPNEFTYSSLIDANCKAGNLGEAF 292

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            L +E+L++ +  N  TY  + + + E+G + + E
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAE 327


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 208/381 (54%), Gaps = 8/381 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+   VLS   L+    +    +    V  ++ +  +E N+ +F+ ++NG C  GK+ +A
Sbjct: 121 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRA 180

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + M + G  P V +Y+I+I G C+   +GK  +   + + M   G  P+ V +NT+
Sbjct: 181 IELFDVMVARGYKPNVHSYSIIIKGLCR---VGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CKD  ++ A+ +F +M   GI   VVTY SLI+GL   G+  EA  L +EM    +
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI 297

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++V  + LI+  CK+  V +ARV+   ++E G+ P V TYNTL++ YC    + +A  
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARK 357

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+ +G +PDV +++ L+ G  +   ++  + + +E+ + G+    V+YN L+  LC
Sbjct: 358 VFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLC 417

Query: 446 KDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           +  +  +A    +E+FK M      PN+VTY++L+    ++G L+ A GL   +   GL 
Sbjct: 418 QARRPLEA----EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLK 473

Query: 505 PNQTTYQIVREEMMEKGFIPD 525
           P+  TY I+ + M + G   D
Sbjct: 474 PDLVTYNIMIDGMCKYGKFKD 494



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 230/478 (48%), Gaps = 53/478 (11%)

Query: 62  SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           S++  G L  +LV  K Y  + S      K  +   +S    +L+   +  CR       
Sbjct: 90  SIVKFGELFSALVRMKHYKTVVSL----SKQMEMAGISHDVLSLTILINCFCR------- 138

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
             L +V       GF    +    GL+ +V++ + L+     EGK      ++  M  R 
Sbjct: 139 --LCHVD-----YGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK-------- 233
            + N+ S++ ++ GLC+ GK  +   ++E MK +G  P VV YN ++D  CK        
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 234 ------KG------------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                 KG                   +G+  +A  +  +M    I+P+ V F+ LID  
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK+  +S A  + + M   G+   V TYN+L+NG C+  ++ EA  + + M++ G  P+V
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            + + L+NG+CK K +++A+ LFD+++ +GL P  ++YNTLI   C+  R  +A  +   
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G  P++ TY+ L+  LS++G ++    +   + N+G++  LVTYNI++  +CK GK
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
            K A  L  E   +  +   PN       I G C+ G L++A+    ++ +    P Q
Sbjct: 492 FKDARELFAE---LSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 6/394 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
              AF    +     S++   +L  ALV+   ++ V  + K+M+   I  ++ S   ++N
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C+   ++    ++  +  LG+ P V+T++ LI+G+C +G IG+   A  +F  MV  G
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGR---AIELFDVMVARG 191

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             PN  +++ +I G C+    +  +K+ E M   G    VV YN++++ LC D  ++EAV
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            +  +M  +G+ P VVT  +LI+G       ++A  L +++    + P ++ ++ LID  
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CKEG + +A  +  +M + GV PDV+TYN L+ G      V   R +   +++ G    +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            +++ILV   CK  +  +A  L DEM         P+ V+YN LI G CQ  +  +A  L
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEM---THRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
             ++   G  PN  TY I+ + + ++G++    G
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMG 462



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 24/351 (6%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD-AVFKDMVENGILPNEV 260
           +N A      M +    P +V +  L     +     K YK   ++ K M   GI  + +
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRM----KHYKTVVSLSKQMEMAGISHDVL 127

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           +   LI+ FC+  ++     V  ++   G+   V+T+++LING C++GK+  A+ L D M
Sbjct: 128 SLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM 187

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +A G KPNV + + +I G C+     +   L + +   G  P V+ YNT++D  CK+  +
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            +A  +   M   G+LP V TY  LI GL   G  +    ++NE+    +   LV +++L
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  +CK+G+  +A  +L  M +M  E   P++ TYN L+ G+C + ++ +A  +   ++ 
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVE---PDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364

Query: 501 KGLIPNQTTYQIVR----------------EEMMEKGFIPDIEGHMYNISG 535
           KG +P+  ++ I+                 +EM  +G IPD   +   ISG
Sbjct: 365 KGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISG 415



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 3/249 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            NI+ A+  F  M +      +V +  L + L         V+L  +M  +G+  +V++ 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             LIN FC+   V+    +   I + GL P+VIT++TLI+ +C EG++  A  + + M+ 
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  P+V +Y+ +I GL R G    V  ++  +   G    +V YN +V  LCKD    +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           AV +     KM+     P +VTY  LI G    G+ ++A GLLNE+    ++P+   + +
Sbjct: 250 AVHIF---CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306

Query: 513 VREEMMEKG 521
           + + M ++G
Sbjct: 307 LIDIMCKEG 315


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 205/421 (48%), Gaps = 43/421 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+R      K + LS   L++AL + GK +       EM R ++  ++ ++N V++ LCK
Sbjct: 23  FRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCK 82

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A ++++A +  E M      P VVTYN L+ G CK G + +   A ++F  M   GI P+
Sbjct: 83  ARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ---ACSLFGSMEGAGITPS 135

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           +VT+ TLID FCK      A  + + M S   +  V +Y S+INGLC + K+D+A  L +
Sbjct: 136 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM  +G KP+ VT N LI+G C K+ + +A+ L   + E G  P  IT+  LI+  C   
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------------------------------ 408
           R+++AF +   M  +G  PD+ T+  L++                               
Sbjct: 256 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPI 315

Query: 409 ---LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
              L R    +    ++ ++   G+   +VTY      L   G  K+ +    E  +M +
Sbjct: 316 FRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLE 372

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +   P++V YNVL+ GFC+  +L+ A  ++  + + GL PN  TY  +      KG +  
Sbjct: 373 QGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEA 432

Query: 526 I 526
           I
Sbjct: 433 I 433



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 168/346 (48%), Gaps = 36/346 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  S ++   L+    K  +FE    + + M  R+    + S+  ++NGLCK  K+++A
Sbjct: 131 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 190

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+MK  G  P  VTYN LI G C K    ++++A  +   MVENG  P+++TF  L
Sbjct: 191 YQLFEEMKLAGCKPDRVTYNTLIHGLCVKQ---RLHEAKDLLTVMVENGFQPDKITFTAL 247

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL--------------- 310
           I+G C  + I  A  +F+ M   G A  +VT+  L++ LC+  KL               
Sbjct: 248 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPE 307

Query: 311 ------------------DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
                             D A  L  +M   G+ PNVVT  A   G    K   +A   F
Sbjct: 308 AVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREF 367

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + EQG+ P ++ YN L+D +CK  R++ A  M   M   G+ P++ TYN L+    R+
Sbjct: 368 RRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRK 427

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           G VE +  +++ +V+ G +  + T++ LV  L   G++  A S L+
Sbjct: 428 GKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 44/382 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    KNG+     ++F ++      +  + +    L+  + K  +    +   +   
Sbjct: 106 TLLGGLCKNGRVAQACSLFGSME--GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMA 163

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
                 +V S   ++  L K  K +    +++EMK    + +  ++N +++GLC   +L+
Sbjct: 164 SRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLH 223

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D++  M   G  P  +T+  LI+G C    I + +    +F+ M + G  P+ VT  
Sbjct: 224 EAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF---VLFQGMAKQGCAPDLVTHT 280

Query: 264 TLIDGFC---------------------------------KDENISAAMKVFEEMGSHGI 290
            L+   C                                 +      A ++ ++M   G+
Sbjct: 281 VLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 340

Query: 291 AAGVVTYNSLINGLCVDGKLDEAV-ALRD--EMMASGLKPNVVTSNALINGFCKKKLVEK 347
              VVTY +   GL   G   E + A R+   M+  G++P++V  N L++GFCK   ++ 
Sbjct: 341 PPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDM 397

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +   + + GL P+++TYNTL+  +C++G++E    + ++M+ RG  PDV+T++ L+A
Sbjct: 398 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 457

Query: 408 GLSREGNVEGVRNIMNELVNNG 429
           GL   G  +   + +N  ++ G
Sbjct: 458 GLFMVGQADAAYSFLNLAMSQG 479



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 32/278 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNG------KFTSV-------------STIFHALST-- 107
           L+H L V ++  + +  L + V+NG       FT++               +F  ++   
Sbjct: 212 LIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 271

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY-GLKSSVLSCNQLLRALVKEGK 166
           C+  L  +++++  L +  ++ ++P L         +Y     +V+    + R L +   
Sbjct: 272 CAPDLVTHTVLVSKLCI--LRKLRPALSV-----VRNYPACPEAVILYTPIFRELGRRRG 324

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+    + ++M RR +  N+ ++     GL    +  +A      M   G+ P +V YN+
Sbjct: 325 FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 384

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           L+DG+CK     ++  A+ + + M ++G+ PN VT+NTL+   C+   + A  ++   M 
Sbjct: 385 LVDGFCKA---DRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 441

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           S G    V T+++L+ GL + G+ D A +  +  M+ G
Sbjct: 442 SRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 216/411 (52%), Gaps = 11/411 (2%)

Query: 110 DSLCRNSIIIDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           + + RN +++D++ L+ +     ++ +    +  F+     G   + ++   L+ +L K 
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ +++  +  EM  R + ++L ++  +++ L K GK ++  D +    S  +SP  VTY
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            +LID  CK   + +   A+ V  +M E  I PN VTF+++I+GF K   +  A +    
Sbjct: 383 TVLIDALCKAHNVDE---AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   GI   VVTY +LI+G       D A+ +  +M+  G+K N    ++L+NG  +   
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +E+A  LF D S  GLS   + Y TLID   K G M  AF     ++DR +LPD   YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            I  L   G  +  ++ + E+ N G++    TYN ++ + C+ G++ KA+ LL EM KM 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMS 618

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             K  PN++TYN L+ G    G +E A  LLNE++  G  P+  T++ V +
Sbjct: 619 SIK--PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 205/453 (45%), Gaps = 80/453 (17%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL K    ++ E V  EM+ + I  N+ +F+ V+NG  K G L+KA++    MK  G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 217 VSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKAD 244
           ++P VVTY  LIDG+ K  G                                 GK+ +A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A+FKD   +G+  + V + TLIDG  K  ++  A K  +E+    +    V YN  IN L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+ GK  EA +   EM   GLKP+  T N +I   C+K    KA  L  ++    + P++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITYNTL+      G +E A  + N M+  G  P   T+  ++   S+   ++ + +I   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF----------------------- 461
           ++N G+ A +  YN L+  LC  G ++KA  +L+EM                        
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 462 ---------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
                    +M  +   PNI T+N L+ G    G++ +A  +L E+ + GL PN  TY I
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 513 VRE----------------EMMEKGFIPDIEGH 529
           +                  EM+ KGF+P +  +
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 197/414 (47%), Gaps = 10/414 (2%)

Query: 104 ALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           AL    D LC     N  I+D L+    +N K       FK A   GL    ++   L+ 
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K G         +E+  R +  +   +N  +N LC  GK  +A   + +M+++G+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
              TYN +I  +C+KG   K  K   +  +M  + I PN +T+NTL+ G      +  A 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALK---LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +  EM S G +   +T+  ++       +LD  + + + MM +GL  ++   N L+   
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C   +  KA V+ +++   G++P  IT+N LI  +CK   +++AFA    ML + + P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +T+N L+ GL   G +     ++ E+  +G+    +TY+IL     K     +A+ L  E
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE 824

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M     +   P + TYN LI  F + G +  A  L  ++ ++G+ P   TY I+
Sbjct: 825 MVG---KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 195/364 (53%), Gaps = 12/364 (3%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + + ++ N LL AL           V  EM +R +  +  + N +L GLC+ G+++ A+ 
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 208 IMEDMKSLGVSP-KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           + +  +  G+    V+ +N LI GYC+   +G    A +V   M   G+  + V +NTL+
Sbjct: 157 LAD--RGGGIHALDVIGWNTLIAGYCR---VGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   + AA  V + M   G+   V TY   I   C    ++EA  L + M+ +G+ 
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +VVT +AL+ G C+     +A  LF ++ + G +P+ +TY TLID+  K GR ++  ++
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+ RGV+ D+ TY  L+  L ++G  + V++ +   +++ +    VTY +L+ ALCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                +A  +L E   ME++   PN+VT++ +I GF ++G L+ A      + E+G+ PN
Sbjct: 392 AHNVDEAEQVLLE---MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 507 QTTY 510
             TY
Sbjct: 449 VVTY 452



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 219/482 (45%), Gaps = 73/482 (15%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS-SVLSCNQLLRALVKEGK 166
           C   +  + + ++ L+    +N +         R G  G+ +  V+  N L+    + G 
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG--GIHALDVIGWNTLIAGYCRVGD 184

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                 V   M  + + +++  +N ++ G C+AG+++ A  +++ MK  GV P V TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            I  YC+  G+ + +    +++ MV NG+L + VT + L+ G C+D   S A  +F EM 
Sbjct: 245 FIVYYCRTKGVEEAFD---LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG---------------------- 324
             G A   VTY +LI+ L   G+  E ++L  EM++ G                      
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 325 -------------LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
                        L PN VT   LI+  CK   V++A  +  ++ E+ +SP+V+T++++I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + + K G ++ A   +  M +RG+ P+V TY  LI G  +    +    + ++++  G++
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 432 AGLVTYNILVGALCKDGKSKKAV-------------------SLLDEMFK---MEKEKKW 469
                 + LV  L ++GK ++A+                   +L+D +FK   M    K+
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 470 ----------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
                     P+ V YNV I   C  GK ++A   L E+   GL P+Q+TY  +      
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 520 KG 521
           KG
Sbjct: 602 KG 603



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 175/369 (47%), Gaps = 46/369 (12%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S N +L   C+   L  A  ++   +     P  V YNIL+        +     A AV 
Sbjct: 75  SLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILL------AALSDHAHAPAVL 123

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLINGLCV 306
            +M + G+  + VT NTL+ G C++  + AA  + +  G  GI A  V+ +N+LI G C 
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG--GIHALDVIGWNTLIAGYCR 181

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G    A+++ D M A GL  +VV  N L+ GFC+   V+ AR + D + E G+ P+V T
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y   I  YC+   +E+AF +   M+  GVL DV T + L+AGL R+G       +  E+ 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK----------------MEKEKKW- 469
             G     VTY  L+ +L K G+ K+ +SLL EM                  + K+ K  
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 470 ---------------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                          PN VTY VLI   C+   +++A  +L E+ EK + PN  T+  V 
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 515 EEMMEKGFI 523
              +++G +
Sbjct: 422 NGFVKRGLL 430


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 216/430 (50%), Gaps = 22/430 (5%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ AY +  K    F+ F +A  +    +V +  +L+  LV  G+FE  E VYK++ ++ 
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
            +L+  ++N ++    ++G+L+ A ++  +MK  G  P   TY  L++     G  G++ 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL---GKAGRVQ 152

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A + F  M+E G+ PN  T+N L+D F K   +  A+ +F EM   G    VVTYN L+
Sbjct: 153 EARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILL 212

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           + LC  G++  A  L  +M   G  P+  T + L+NG  K   VE+A  +F ++ ++G++
Sbjct: 213 DALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             ++ YN+L+    K G M+  + +   M  +G  PD  ++N ++  L +    +  R +
Sbjct: 273 VDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREV 332

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
              +V +G +  L++YNIL+ +  + G + +A  +L+EM    +    P   TYN LI  
Sbjct: 333 FARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV---EAGFIPETKTYNSLIHW 389

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPD 525
               G++++A  +L E+   G  P+  TY  +                 ++M +KG  PD
Sbjct: 390 LATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449

Query: 526 IEGHMYNISG 535
              +   I G
Sbjct: 450 TLSYAVRIDG 459



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 215/437 (49%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + +F   + + V +G+F     ++  L      L R     ++L+  + ++ +     
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDR--FAYNVLIRYFGRSGQLDSAM 120

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+     G +    +   L+ AL K G+ ++    +  M  R +  N+ ++N +++  
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            K G+L+ A  +  +MK  G  P VVTYNIL+D  C  G +G   K   +F  M  +G  
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARK---LFHKMTGDGCS 237

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+  T++TL++G  K   +  A KVF EM   G+A  +V YNSL+  L   G +D    L
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKL 297

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             EM   G  P+  + N +++   K    + AR +F  + E G  P +I+YN LID+Y +
Sbjct: 298 MKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G    A  M   M++ G +P+  TYN LI  L+ +G V+    ++ E+   G R  +VT
Sbjct: 358 FGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVT 417

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+  L K G++++A  L  +M     E   P+ ++Y V I G     +L++A  L  
Sbjct: 418 YNRLMDMLGKRGENQRAARLFQQMKDKGVE---PDTLSYAVRIDGLAFDDRLDEALVLFK 474

Query: 497 ELLEKGLIPNQTTYQIV 513
           ++   G   ++  Y+I+
Sbjct: 475 DMKAVGCPVDKAMYRIL 491



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 22/389 (5%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           +L  L   G  + +E + KEM      L  ++   ++    +  K   A D+    +S  
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            SP V  +  LID     G   +  +A+ V+K +V+ G   +   +N LI  F +   + 
Sbjct: 61  CSPTVHAFTKLIDILVNSG---EFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD 117

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           +AM++F EM   G      TY  L+N L   G++ EA +  D M+  GL PN+ T N L+
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLM 177

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           + F K   ++ A  LF ++  +G  PSV+TYN L+DA C  GR+  A  + + M   G  
Sbjct: 178 DAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCS 237

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY+ L+ GL + G VE    +  E+V+ G+   LV YN L+  L K G   +   L
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKL 297

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--- 513
           + E   M ++   P+  ++N ++    +  K + A  +   ++E G  P+  +Y I+   
Sbjct: 298 MKE---MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDS 354

Query: 514 -------------REEMMEKGFIPDIEGH 529
                         EEM+E GFIP+ + +
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTY 383



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 10/280 (3%)

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           K  GD G      + + L+  L K G+ E+   V++EM  R + ++L ++N +L  L KA
Sbjct: 230 KMTGD-GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA---VFKDMVENGIL 256
           G +++   +M++M   G  P   ++N ++D       +GK  K DA   VF  MVE+G  
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA------LGKANKPDAAREVFARMVESGCK 342

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ +++N LID + +  + + A ++ EEM   G      TYNSLI+ L  DG++DEA A+
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +EM  +G +P+VVT N L++   K+   ++A  LF  + ++G+ P  ++Y   ID    
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           + R+++A  +   M   G   D + Y  LI    R G+ E
Sbjct: 463 DDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 175/378 (46%), Gaps = 5/378 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G+     + F A+      L  N    ++LM A+ K  +  +    F      G + S
Sbjct: 147 KAGRVQEARSFFDAM--LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++ N LL AL   G+      ++ +M       +  +++ ++NGL K+G++ +A  +  
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFR 264

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   GV+  +V YN L+    K G + +++K   + K+M   G  P+  +FNT++D   
Sbjct: 265 EMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK---LMKEMSRKGFHPDAFSFNTIMDALG 321

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K     AA +VF  M   G    +++YN LI+     G   +A  + +EM+ +G  P   
Sbjct: 322 KANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETK 381

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N+LI+       V++A  + +++   G  P V+TYN L+D   K G  + A  +   M
Sbjct: 382 TYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            D+GV PD  +Y   I GL+ +  ++    +  ++   G       Y IL+ A  + G +
Sbjct: 442 KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDT 501

Query: 451 KKAVSLLDEMFKMEKEKK 468
           +    L  E   M  E +
Sbjct: 502 ELEAQLKHESQFMPVESR 519


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 204/379 (53%), Gaps = 13/379 (3%)

Query: 127 VKNMK-PHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           ++N+K P L    FK A      + +V + N  L ALVK G       ++ +M  +    
Sbjct: 11  LENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLP 70

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N+ ++  VL GLC   K + A ++++DM+S  ++P     N+L+   CK G +   Y+  
Sbjct: 71  NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYE-- 128

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            ++K + +   L + +++N L  G CK + I  A+ VF EM  + +   ++TYN L+ G 
Sbjct: 129 -LYKRLSDECSL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186

Query: 305 CVDGKLDEAVALRDEMM----ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           C  G++++A+ L +EM+     S + P++ + N +I+GFCK + +  AR +   + + G 
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           SP+V+T+NTL+D  C  G++++A AM   M++R   P   TY  LI G +R   ++   +
Sbjct: 247 SPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAND 306

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
              +++  G+   + TY  L+G LC   K + A+ +L  M    +E   PN+VTY  +I 
Sbjct: 307 YFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGRE---PNVVTYTRVIG 363

Query: 481 GFCQKGKLEDANGLLNELL 499
             C+ G++E A  L N+ +
Sbjct: 364 ALCKGGQIERATKLFNDAM 382



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 40/329 (12%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           V TYN  ++   K GG G   KA  +F DM+    LPN  T+  ++ G C D    AA++
Sbjct: 37  VFTYNAYLNALVK-GGHGS--KARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALE 93

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + ++M S  +       N L++ LC +GK+D A  L  + ++     + ++ N L  G C
Sbjct: 94  LLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELY-KRLSDECSLDRISYNMLTYGLC 152

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD----RGVL 396
           K   +++A  +F ++ E  + PS++TYN L+  YC+ GRME A  +   M++      V+
Sbjct: 153 KADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVV 212

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD+ +YN +I+G  +   +   R ++  ++ +G    +VT+N L+  LC  GK  +A ++
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAM 272

Query: 457 LDEM----------------------FKMEKEKKW----------PNIVTYNVLIKGFCQ 484
            + M                       +++K   +          PN+ TY  LI G C 
Sbjct: 273 FEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCD 332

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             K+EDA  +L  +   G  PN  TY  V
Sbjct: 333 ANKVEDALEILKRMSSTGREPNVVTYTRV 361



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 193/456 (42%), Gaps = 61/456 (13%)

Query: 33  ILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKN 92
           ++ +  +   P L  R F W+ ++    H++      L++LV      K R      +  
Sbjct: 7   VIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66

Query: 93  GKFTSVSTIFHAL-STCSDS----------------LCRNSIIIDMLMLAYVKNMKPHLG 135
               ++ T    L   C D+                L   + I++ML+    KN K    
Sbjct: 67  ECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAA 126

Query: 136 FEAFKRAGD-------------YGL---------------------KSSVLSCNQLLRAL 161
           +E +KR  D             YGL                       S+L+ N LL   
Sbjct: 127 YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186

Query: 162 VKEGKFEDVEYVYKEM----KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
            + G+ E    + +EM    K   +  ++ S+N V++G CKA +L  A  ++  M   G 
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246

Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
           SP VVT+N L+DG C     GK+ +A+A+F+ MVE    P  VT+  LI G  +   I  
Sbjct: 247 SPNVVTFNTLLDGLCL---TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A   F +M   G+   V TY +LI GLC   K+++A+ +   M ++G +PNVVT   +I 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 338 GFCKKKLVEKARVLFDDI---SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
             CK   +E+A  LF+D          P    Y+T+I   C++ +  +A+     M++  
Sbjct: 364 ALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESK 423

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ++     Y  +  GL      E V  +  E   +G+
Sbjct: 424 LVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F  J     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L++AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++FEEM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++  A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E A   R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYVPSVVT 418



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 186/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K          
Sbjct: 64  SDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  ++    ++   M + G+   V TY+ LINGLC + K+++A  L +EM+ +GL PN
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V  A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  +E A  LF+++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR+  A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAXJLETKGTQISDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  +E    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           +  E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   ++  L +    + V     
Sbjct: 66  IYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           G+ + G L++   L N +   G+ P+  TY +                + EEM++ G +P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVP 239

Query: 525 D-------IEGHMYN 532
           +       I+GH  N
Sbjct: 240 NGVTFTTLIDGHCKN 254


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 235/508 (46%), Gaps = 17/508 (3%)

Query: 18  NHHWS----KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
           N  WS    +L  TDPN +I  L      P +  R+F W  ++     S      +L   
Sbjct: 107 NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLE-- 164

Query: 74  VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
           ++A+    + S  ++  +      +  I   L   S        ++D+L+  Y K     
Sbjct: 165 ILAEN--DLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAE 222

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
               +F++    G   SV +CN +L+ L           VY+ M    I   + +FN +L
Sbjct: 223 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 282

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +   KAG L +   I  +MK   +    VTYNILI+G+ K G   KM +A     DM  +
Sbjct: 283 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG---KMEEARRFHGDMRRS 339

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G      +FN LI+G+CK      A  V +EM + GI     TYN  I  LC  G++D+A
Sbjct: 340 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 399

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                E+++S   P+VV+ N L++G+ K     +A +LFDD+    + PS++TYNTLID 
Sbjct: 400 ----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 455

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+ G +E A  ++  M  + + PDV TY  L+ G  + GN+     + +E++  G++  
Sbjct: 456 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 515

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
              Y        + G S KA  L +EM   +     P++  YNV I G C+ G L  A  
Sbjct: 516 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIE 573

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
              ++   GL+P+  TY  V    +E G
Sbjct: 574 FQRKIFRVGLVPDHVTYTTVIRGYLENG 601



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 204/413 (49%), Gaps = 40/413 (9%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++G+  +V++ N +L +  K G  E V+ ++ EMKRR IE +  ++N ++NG  K GK+ 
Sbjct: 268 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 327

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A     DM+  G +    ++N LI+GYCK+G     +    V  +M+  GI P   T+N
Sbjct: 328 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW---GVTDEMLNAGIYPTTSTYN 384

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
             I   C    I  A ++   M     A  VV+YN+L++G    GK  EA  L D++ A 
Sbjct: 385 IYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 440

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            + P++VT N LI+G C+   +E A+ L ++++ Q + P VITY TL+  + K G +  A
Sbjct: 441 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 500

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA-GLVTYNILVG 442
             + + ML +G+ PD   Y     G  R G+ +    +  E+V     A  L  YN+ + 
Sbjct: 501 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 560

Query: 443 ALCKDGKSKKAVSLLDEMFK--------------------------------MEKEKKWP 470
            LCK G   KA+    ++F+                                M +++ +P
Sbjct: 561 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 620

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           +++TY VLI G  + G+LE A     E+ ++G+ PN  T+  +   M + G I
Sbjct: 621 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 673



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 205/403 (50%), Gaps = 17/403 (4%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVE 171
           + +  ++L+  + KN K     EA +  GD    G   +  S N L+    K+G F+D  
Sbjct: 309 SEVTYNILINGFSKNGKME---EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 365

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V  EM    I     ++N  +  LC  G+++ A +++  M     +P VV+YN L+ GY
Sbjct: 366 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGY 421

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            K   +GK  +A  +F D+    I P+ VT+NTLIDG C+  N+  A ++ EEM +  I 
Sbjct: 422 IK---MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 478

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V+TY +L+ G   +G L  A  + DEM+  G+KP+         G  +    +KA  L
Sbjct: 479 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 538

Query: 352 FDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
            ++ ++    +P +  YN  ID  CK G +  A   +  +   G++PD  TY  +I G  
Sbjct: 539 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 598

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
             G  +  RN+ +E++   +   ++TY +L+    K G+ ++A     EM   +K    P
Sbjct: 599 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM---KKRGVRP 655

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           N++T+N L+ G C+ G +++A   L ++ E+G+ PN+ +Y ++
Sbjct: 656 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 698



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 173/331 (52%), Gaps = 7/331 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S N L+   +K GKF +   ++ +++   I  ++ ++N +++GLC++G L  A  + E
Sbjct: 411 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 470

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M +  + P V+TY  L+ G+ K G +     A  V+ +M+  GI P+   + T   G  
Sbjct: 471 EMTTQLIFPDVITYTTLVKGFVKNGNLSM---ATEVYDEMLRKGIKPDGYAYTTRAVGEL 527

Query: 271 KDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           +  +   A ++ EEM  +   A  +  YN  I+GLC  G L +A+  + ++   GL P+ 
Sbjct: 528 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 587

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT   +I G+ +    + AR L+D++  + L PSVITY  LI  + K GR+E AF     
Sbjct: 588 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 647

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  RGV P+V T+N L+ G+ + GN++     + ++   G+     +Y +L+   C   K
Sbjct: 648 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 707

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
            ++ V L  EM   E E   P+  T+  L K
Sbjct: 708 WEEVVKLYKEMLDKEIE---PDGYTHRALFK 735



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 25/302 (8%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F+ M+  G LP+    N ++        ++ A  V+E M  HGI   V+T+N++++    
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+    +  EM    ++ + VT N LINGF K   +E+AR    D+   G + +  +
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +N LI+ YCK+G  +DA+ + + ML+ G+ P  STYN  I  L   G ++  R    EL+
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELL 403

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           ++     +V+YN L+    K GK  +A  L D++   +     P+IVTYN LI G C+ G
Sbjct: 404 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH---PSIVTYNTLIDGLCESG 460

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHM 530
            LE A  L  E+  + + P+  TY                  V +EM+ KG  PD  G+ 
Sbjct: 461 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD--GYA 518

Query: 531 YN 532
           Y 
Sbjct: 519 YT 520



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 18/353 (5%)

Query: 67  GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM- 123
            R L S + A       + +H ++K GKF   S +F  L       S+   + +ID L  
Sbjct: 399 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 458

Query: 124 ---LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
              L   + +K  +  +         +   V++   L++  VK G       VY EM R+
Sbjct: 459 SGNLEGAQRLKEEMTTQL--------IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGK 239
            I+ +  ++     G  + G  +KA  + E+M +    +P +  YN+ IDG CK   +G 
Sbjct: 511 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK---VGN 567

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + KA    + +   G++P+ VT+ T+I G+ ++     A  +++EM    +   V+TY  
Sbjct: 568 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 627

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI G    G+L++A     EM   G++PNV+T NAL+ G CK   +++A      + E+G
Sbjct: 628 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 687

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + P+  +Y  LI   C   + E+   +   MLD+ + PD  T+  L   L ++
Sbjct: 688 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S N ++ AL  E +  +V  V  EM +R ++ N+ ++  +++  CKA +L  A  I+  M
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            S+G +P V+T+  L+ G+ + G   K++ A +++  MV+ G  P+ +++N LI G C  
Sbjct: 231 VSMGCTPNVLTFTALVKGFFEDG---KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 287

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            ++  A+  F  M  + +     TY++L++G    G LD A+ + +EM +SG KPNVV  
Sbjct: 288 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 347

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             +I+  CKK + ++A  L D +      P+ +T+NTLI   C  GR+  A  + + M  
Sbjct: 348 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 407

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P+  TYN L+ GL REGN +    ++ E++NNG    LVTYN ++  LC+    K 
Sbjct: 408 NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKH 467

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A+ LL  M     +   P+  T+N +I  +C++GK+  A  LL ++       N   Y I
Sbjct: 468 AMLLLGRMMVQGIQ---PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 524

Query: 513 VREEMMEKG 521
           +  E+  +G
Sbjct: 525 LISELCNQG 533



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 12/398 (3%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLK-SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           A+ +        + F RA D G +   V   N LL AL++E     V  VY  M++  ++
Sbjct: 42  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 101

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+ ++N ++  LC+  +++ A  ++++M   G  P  V++  ++ G CK   +G++ +A
Sbjct: 102 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCK---LGRVEEA 158

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
                + V     P + ++N ++   C +  +     V  EM   G+   VVTY ++++ 
Sbjct: 159 RGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            C   +L  A A+   M++ G  PNV+T  AL+ GF +   V  A  ++  + ++G +PS
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I+YN LI   C  G ++ A    NSM    +LP+ +TY+ L+ G S  G+++G   I N
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+ ++G +  +V Y  ++  LCK     +A SL+D   KM  +   PN VT+N LI   C
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID---KMLMDNCPPNTVTFNTLIGRLC 390

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             G++  A  + + +   G  PN  TY  +   +  +G
Sbjct: 391 DCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 428



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 176/352 (50%), Gaps = 12/352 (3%)

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-S 218
            L   G  + V+Y  +EM+ R +    D+    +    +AG  ++A         LG   
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V  YN L+D   ++  +G +     V+ +M + G+ PN  T+N LI   C+++ + AA
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVP---VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAA 123

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
            K+ +EM   G     V++ ++++G+C  G+++EA     E +     P   + NA+++ 
Sbjct: 124 RKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHA 178

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
            C +  + +   + +++ ++GL P+V+TY T++DA+CK   +  A A+   M+  G  P+
Sbjct: 179 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 238

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V T+  L+ G   +G V    ++ + +V+ G     ++YN+L+  LC  G  K A   LD
Sbjct: 239 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA---LD 295

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
               M++    PN  TY+ L+ GF   G L+ A  + NE+   G  PN   Y
Sbjct: 296 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 347



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 171/369 (46%), Gaps = 43/369 (11%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    L+  + ++ K H     +    D G   S +S N L+R L   G  +     +
Sbjct: 238 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 297

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             MKR  +  N  +++ +++G   AG L+ A  I  +MKS G  P VV Y  +ID  CKK
Sbjct: 298 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 357

Query: 235 GGIGKMY-KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                M+ +A+++   M+ +   PN VTFNTLI   C    +  A+ VF  M  +G    
Sbjct: 358 ----MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 413

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             TYN L++GL  +G   +A A+  EM+ +G + ++VT N +IN  C+  + + A +L  
Sbjct: 414 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 473

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  QG+ P   T+N +I AYCKEG+                   VS   CL+  ++   
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGK-------------------VSIAACLLGQMNA-- 512

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V   RN+             V Y IL+  LC  GK   A+  L    KM  E   PN  
Sbjct: 513 -VNCPRNV-------------VAYTILISELCNQGKLSNAMVYL---LKMLYEGICPNEA 555

Query: 474 TYNVLIKGF 482
           T+NVL++  
Sbjct: 556 TWNVLVRAI 564



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 13/255 (5%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL---KPNVV 330
           ++       +EM   G+A       + I      G  D A  L+    AS L    P V 
Sbjct: 13  DVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRA--LKTFYRASDLGCRDPGVR 70

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N L++   ++ +V     ++D++ + G+ P+V TYN LI A C+  R++ A  M + M
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             +G  PD  ++  +++G+ + G VE  R  + E V         +YN +V ALC + + 
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRM 185

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +  S+++EM +   +   PN+VTY  ++  FC+  +L  A  +L  ++  G  PN  T+
Sbjct: 186 WEVFSVVNEMVQRGLQ---PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242

Query: 511 QIVREEMMEKGFIPD 525
             + +   E G + D
Sbjct: 243 TALVKGFFEDGKVHD 257



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR-AGLVTYNILVGALCKDGKSK 451
           RGV          I   +R G+ +          + G R  G+  YN L+ AL ++    
Sbjct: 27  RGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVG 86

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
             V + D M K   +   PN+ TYN+LI+  CQ  +++ A  +L+E+  KG  P++ ++ 
Sbjct: 87  AVVPVYDNMRKAGVD---PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG 143

Query: 512 IVREEMMEKGFIPDIEGHM 530
            +   M + G + +  G +
Sbjct: 144 TIVSGMCKLGRVEEARGFL 162


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 230/471 (48%), Gaps = 10/471 (2%)

Query: 34  LQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNG 93
           L L N   +P   L +F  ++K+ +    +    +++H L  A+ Y ++R +L+  V   
Sbjct: 103 LVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLC 162

Query: 94  KFTSV-STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
           K   + S ++  L +       +  + DM++  Y +          F   G  G   S+ 
Sbjct: 163 KNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLR 222

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN LL  LV+ G+      VY++M    I  ++ S+  ++N  CK G++++A + +++M
Sbjct: 223 SCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM 282

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +     P VVTYN LIDGY     +G +  A  V   M E GI  N  T+  LI G+CK 
Sbjct: 283 ERSCCEPNVVTYNSLIDGYV---SLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
             +  A K+F  M    +      Y  LI+  C  G++D+A+ +RD M+  GLK N V  
Sbjct: 340 GQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVIC 399

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N+LING+CK   V KA  +   + +  L P    YNTL+D +CK+     AF + + M +
Sbjct: 400 NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHN 459

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +GV   V TYN L+  L   G+VE   +I N +   G+    VTY  L+ A  K G   +
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL---LNELLE 500
           A+ +  +       K   +I  YN +I GFC+  KL  A  +   + EL+E
Sbjct: 520 AMMIWKDALSKGFTK---SITLYNTMICGFCKMEKLVQAQEIFLKMKELVE 567



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 10/344 (2%)

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R    +   F+ +L    + G    A  + ++M   G  P + + N L+    + G   +
Sbjct: 180 REFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNG---E 236

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
            +KA  V++ M+  GILP+  ++  +++ +CK+  +  A    +EM        VVTYNS
Sbjct: 237 AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNS 296

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           LI+G    G +  A  +   M   G+  N  T   LI G+CK+  +E+A  LF  + E+ 
Sbjct: 297 LIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKN 356

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L      Y  LI AYC  GR++DA  +R++ML  G+  +    N LI G  + G+V    
Sbjct: 357 LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAA 416

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN--IVTYNV 477
            ++  + +  ++     YN L+   CK     KA  L DEM       K  N  +VTYN 
Sbjct: 417 EVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEM-----HNKGVNFTVVTYNT 471

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           L+K     G +E A  + N + ++G+ PN+ TY  + +   + G
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVG 515



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 19/344 (5%)

Query: 196 LCKAGKLNKA--SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAVFKDMVE 252
           LCK   +  A   +++   +    SP V  +++++  Y +KG    M K A  VF +M +
Sbjct: 161 LCKNNYIASAVWDELVSVYREFSFSPTV--FDMILKVYAEKG----MTKFALCVFDNMGK 214

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G +P+  + N+L+    ++     A+ V+E+M + GI   + +Y  ++N  C +G++DE
Sbjct: 215 CGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDE 274

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A     EM  S  +PNVVT N+LI+G+     V  A+ +   +SE+G+  +  TY  LI 
Sbjct: 275 AFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIK 334

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            YCK G+ME A  +   M+++ +  D   Y  LI      G V+    I + ++  G++ 
Sbjct: 335 GYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKM 394

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLE 489
             V  N L+   CK G   KA  +L  M      K W   P+   YN L+ GFC++    
Sbjct: 395 NTVICNSLINGYCKLGHVNKAAEVLVSM------KDWNLKPDSYGYNTLLDGFCKQEDFI 448

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            A  L +E+  KG+     TY  + + +   G +     H++N+
Sbjct: 449 KAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEH-ALHIWNL 491



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 20/268 (7%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F   +  +CK  +I +  ++++E+  +     V+  N+ I         DE V++  E  
Sbjct: 128 FRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYI----ASAVWDELVSVYREF- 182

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
                P V   + ++  + +K + + A  +FD++ + G  PS+ + N+L+    + G   
Sbjct: 183 --SFSPTVF--DMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAF 238

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A  +   M+  G+LPD+ +Y  ++    +EG V+   N + E+  +     +VTYN L+
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLI 298

Query: 442 GALCKDGK---SKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNE 497
                 G    +KK ++L+ E       K  P N  TY +LIKG+C++G++E A  L   
Sbjct: 299 DGYVSLGDVCGAKKVLALMSE-------KGIPENSRTYTLLIKGYCKRGQMEQAEKLFGC 351

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++EK L  ++  Y ++       G + D
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDD 379


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 239/496 (48%), Gaps = 71/496 (14%)

Query: 79  YPKIRS---FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV-KNMKPHL 134
           +PK RS    LH   K G+       F  +        + S+    +M+ Y+ K     +
Sbjct: 18  FPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG---IKRSVFTYNIMIDYLCKEGDLEM 74

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
               F +  + G    +++ N L+    K G  ++   ++++MK    + ++ ++N ++N
Sbjct: 75  ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALIN 134

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK  ++ KA + + +MK+ G+ P VVTY+  ID +CK+G + +  K    F DM    
Sbjct: 135 CFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK---FFVDMRRVA 191

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PNE T+ +LID  CK  N++ A+K+ EE+   GI   VVTY +L++GLC +G++ EA 
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251

Query: 315 ALRDEMMASGLKPNVVTSNALINGF----------------------------------- 339
            +   M+ +G+ PN  T  AL++GF                                   
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 311

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR------------ 387
           C +  +E+A++L  +I E G++ + + Y TL+DAY K G+  +A  +             
Sbjct: 312 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK 371

Query: 388 -----------NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
                      + MLD+G++PD   Y  LI G  + GN++   N+ + ++  GM   L  
Sbjct: 372 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 431

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+  L   G+ +KA +LLDEM     +   P+ V Y  LIK +   GK+++A  L N
Sbjct: 432 YTALIWGLSHSGQVQKARNLLDEMIG---KGVLPDEVVYMCLIKKYYALGKVDEALELQN 488

Query: 497 ELLEKGLIPNQTTYQI 512
           E+ ++G+I   + + +
Sbjct: 489 EMAKRGMITGLSDHAV 504



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 34/415 (8%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           FK  G  G+K SV + N ++  L KEG  E    ++ +MK      ++ ++N +++G  K
Sbjct: 44  FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 103

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L++   I E MK     P V+TYN LI+ +CK     +M KA     +M  NG+ PN
Sbjct: 104 LGLLDECICIFEQMKDADCDPDVITYNALINCFCK---FERMPKAFEFLHEMKANGLKPN 160

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT++T ID FCK+  +  A+K F +M    +     TY SLI+  C  G L EA+ L +
Sbjct: 161 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 220

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           E++ +G+K NVVT  AL++G C++  +++A  +F  +   G++P+  TY  L+  + K  
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            ME A  +   M ++ + PD+  Y  ++ GL  E  +E  + ++ E+  +G+    V Y 
Sbjct: 281 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 340

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+ A  K G++ +A++LL+EM                 L+ G C+    E A  L +E+
Sbjct: 341 TLMDAYFKSGQATEALTLLEEMLD---------------LVDGLCKNNCFEVAKKLFDEM 385

Query: 499 LEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISGTS 537
           L+KG++P++  Y                  +R+ M+E G   D+  +   I G S
Sbjct: 386 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 440



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 217/405 (53%), Gaps = 14/405 (3%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +   + +     SCN LL  L K G+ +     +K+M    I+ ++ ++N +++ L
Sbjct: 7   ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL 66

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G L  A  +   MK  G +P +VTYN LIDG+   G +G + +   +F+ M +    
Sbjct: 67  CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH---GKLGLLDECICIFEQMKDADCD 123

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ +T+N LI+ FCK E +  A +   EM ++G+   VVTY++ I+  C +G L EA+  
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
             +M    L PN  T  +LI+  CK   + +A  L ++I + G+  +V+TY  L+D  C+
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGRM++A  +  +ML+ GV P+  TY  L+ G  +   +E  ++I+ E+    ++  L+ 
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y  ++  LC + + ++A  L+ E+    KE     N V Y  L+  + + G+  +A  LL
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEI----KESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 496 NELLE--KGLIPNQTTYQIVR---EEMMEKGFIPDIEGHMYNISG 535
            E+L+   GL  N   +++ +   +EM++KG +PD   +   I G
Sbjct: 360 EEMLDLVDGLCKN-NCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 403



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 189/356 (53%), Gaps = 8/356 (2%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
            E+    + +M++ R+     S N +L+ L K G+ + +    +DM + G+   V TYNI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           +ID  CK+   G +  A ++F  M E G  P+ VT+N+LIDG  K   +   + +FE+M 
Sbjct: 62  MIDYLCKE---GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
                  V+TYN+LIN  C   ++ +A     EM A+GLKPNVVT +  I+ FCK+ +++
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A   F D+    L+P+  TY +LIDA CK G + +A  +   +L  G+  +V TY  L+
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            GL  EG ++    +   ++N G+     TY  LV    K  + + A  +L EM    KE
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM----KE 294

Query: 467 KKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           K   P+++ Y  ++ G C + +LE+A  L+ E+ E G+  N   Y  + +   + G
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 350



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 11/186 (5%)

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
           ++E+A   F  + +  + P   + N L+    K GR + +      M   G+   V TYN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE---M 460
            +I  L +EG++E  R++  ++   G    +VTYN L+     DG  K  + LLDE   +
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI-----DGHGK--LGLLDECICI 113

Query: 461 FKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           F+  K+    P+++TYN LI  FC+  ++  A   L+E+   GL PN  TY    +   +
Sbjct: 114 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 173

Query: 520 KGFIPD 525
           +G + +
Sbjct: 174 EGMLQE 179


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 199/392 (50%), Gaps = 6/392 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G    +R  + G + S  +   ++    +E K ++ E + +EM  + +   + +   V+N
Sbjct: 273 GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 332

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK G+++ A  ++E MK  G  P V TYN L+ G+C +G   K++KA  +   M   G
Sbjct: 333 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVHKAMTLLNKMRACG 389

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+N LI G C D +I +A ++   M   G+ A   TYN+LIN LC DG+ D+A 
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L D +   G+KPN VT N+LING CK    + A    + +   G +P   TY++ I+  
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK    ++  +    ML + V P    Y  +I  L +E N   V     E+V++G    +
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY   + A C +G+  +A ++L E   M K     + + YN L+ G    G+ + A  +
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           L ++     +PNQ TY I+   ++    + D+
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 658



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 23/402 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + GL   V++C  ++ A  KEG+  D   V + MK R  + N+ ++N ++ G 
Sbjct: 310 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 369

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C  GK++KA  ++  M++ GV+P  VTYN+LI G C  G I   ++   + + M  +G++
Sbjct: 370 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR---LLRLMEGDGLI 426

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            ++ T+N LI+  CKD     A  +F+ + + GI    VT+NSLINGLC  GK D A   
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+++G  P+  T ++ I   CK K  ++      ++ ++ + PS + Y  +I    K
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 546

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           E            M+  G  PDV TY   +     EG +    N++ E+  NG+    + 
Sbjct: 547 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK---------------- 480
           YN L+      G++  AVS+L +M  +      PN  TY +L++                
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASV---PNQFTYFILLRHLVRMRLVEDVLPLTP 663

Query: 481 -GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G  +  +L D  GL + + +   +PN  TY  + E   E G
Sbjct: 664 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDG 705



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 179/363 (49%), Gaps = 10/363 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++R+L +             M R     +  +FN ++ G C+  +++ A D+ + M  
Sbjct: 157 NAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 216

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +  VV+Y  LI+G C+ G I +   A  +F +M +    P+   +  L+ G C  E 
Sbjct: 217 RGFAQDVVSYATLIEGLCEAGRIDE---AVELFGEMDQ----PDMHMYAALVKGLCNAER 269

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
               + +   M   G       Y ++++  C + K  EA  +  EM   GL P VVT  A
Sbjct: 270 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTA 329

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +IN +CK+  +  A  + + +  +G  P+V TYN L+  +C EG++  A  + N M   G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V PD  TYN LI G   +G++E    ++  +  +G+ A   TYN L+ ALCKDG++ +A 
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           SL D    +E     PN VT+N LI G C+ GK + A   L +++  G  P+  TY    
Sbjct: 450 SLFD---SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 515 EEM 517
           E +
Sbjct: 507 EHL 509



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 17/390 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +    + N L+    +  + +    ++ +M  R    ++ S+  ++ GLC+AG++++A
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 242

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYC--KKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            ++  +M      P +  Y  L+ G C  ++G  G +     + + M E G  P+   + 
Sbjct: 243 VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLL-----MLRRMKELGWRPSTRAYA 293

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++D  C++     A ++ +EM   G+A  VVT  ++IN  C +G++ +A+ + + M   
Sbjct: 294 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 353

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KPNV T NAL+ GFC +  V KA  L + +   G++P  +TYN LI   C +G +E A
Sbjct: 354 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F +   M   G++ D  TYN LI  L ++G  +   ++ + L   G++   VT+N L+  
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK GK+  A   L+   KM      P+  TY+  I+  C+    ++    + E+L+K +
Sbjct: 474 LCKSGKADIAWKFLE---KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530

Query: 504 IPNQTTYQIVREEMMEK---GFIPDIEGHM 530
            P+   Y IV  +++++   G +    G M
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEM 560



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 219/490 (44%), Gaps = 62/490 (12%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTC---SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           + +  F   GK     T+ + +  C    D++  N +I    +  ++++      F   +
Sbjct: 364 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES-----AFRLLR 418

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                GL +   + N L+ AL K+G+ +    ++  ++ R I+ N  +FN ++NGLCK+G
Sbjct: 419 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 478

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-------IGKMYKADA-------- 245
           K + A   +E M S G +P   TY+  I+  CK  G       IG+M + D         
Sbjct: 479 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 538

Query: 246 -----------------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                             + +MV +G  P+ VT+ T +  +C +  ++ A  V  EM  +
Sbjct: 539 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 598

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+    + YN+L++G    G+ D AV++  +M +    PN  T   L+    + +LVE  
Sbjct: 599 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 658

Query: 349 RVL-----------------FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
             L                 FD + +    P+  TY+++++ + ++GR E+A ++ + M 
Sbjct: 659 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 718

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +  +  +   Y  L+    +         ++  ++ +G    L++Y  L+  L  +G++ 
Sbjct: 719 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTD 778

Query: 452 KAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           KA     E+F   + K + P+ + + V+I G  +KG  + +  ++  L      P+  TY
Sbjct: 779 KA----KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834

Query: 511 QIVREEMMEK 520
            ++ EE+ ++
Sbjct: 835 AMLTEELPDR 844



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P   T+N +I   C+  +++ A++    M   G      T+NSLI G C   ++D A  L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D+M   G   +VV+   LI G C+   +++A  LF ++ +    P +  Y  L+   C 
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCN 266

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             R E+   M   M + G  P    Y  ++    RE   +    ++ E+   G+   +VT
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
              ++ A CK+G+   A+ +L E+ K+   K  PN+ TYN L++GFC +GK+  A  LLN
Sbjct: 327 CTAVINAYCKEGRMSDALRVL-ELMKLRGCK--PNVWTYNALVQGFCNEGKVHKAMTLLN 383

Query: 497 ELLEKGLIPNQTTYQIV 513
           ++   G+ P+  TY ++
Sbjct: 384 KMRACGVNPDAVTYNLL 400



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 19/109 (17%)

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGL 494
           TYN ++ +LC+     +A+  L  M +      W P+  T+N LI G+C+  +++ A  L
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVR----SGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFI------------PDIEGHMY 531
            +++  +G   +  +Y  + E + E G I            PD+  HMY
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM--HMY 257


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 216/411 (52%), Gaps = 11/411 (2%)

Query: 110 DSLCRNSIIIDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           + + RN +++D++ L+ +     ++ +    +  F+     G   + ++   L+ +L K 
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ +++  +  EM  R + ++L ++  +++ L K GK ++  D +    S  +SP  VTY
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            +LID  CK   + +   A+ V  +M E  I PN VTF+++I+GF K   +  A +    
Sbjct: 383 TVLIDALCKAHNVDE---AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   GI   VVTY +LI+G       D A+ +  +M+  G+K N    ++L+NG  +   
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +E+A  LF D S  GLS   + Y TLID   K G M  AF     ++DR +LPD   YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            I  L   G  +  ++ + E+ N G++    TYN ++ + C+ G++ KA+ LL EM KM 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMS 618

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             K  PN++TYN L+ G    G +E A  LLNE++  G  P+  T++ V +
Sbjct: 619 SIK--PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 207/458 (45%), Gaps = 80/458 (17%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL K    ++ E V  EM+ + I  N+ +F+ V+NG  K G L+KA++    MK  G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 217 VSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKAD 244
           ++P VVTY  LIDG+ K  G                                 GK+ +A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A+FKD   +G+  + V + TLIDG  K  ++  A K  +E+    +    V YN  IN L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+ GK  EA +   EM   GLKP+  T N +I   C+K    KA  L  ++    + P++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITYNTL+      G +E A  + N M+  G  P   T+  ++   S+   ++ + +I   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF----------------------- 461
           ++N G+ A +  YN L+  LC  G ++KA  +L+EM                        
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 462 ---------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
                    +M  +   PNI T+N L+ G    G++ +A  +L E+ + GL PN  TY I
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 513 VRE----------------EMMEKGFIPDIEGHMYNIS 534
           +                  EM+ KGF+P +  +   IS
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALIS 842



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 205/441 (46%), Gaps = 26/441 (5%)

Query: 104 ALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           AL    D LC     N  I+D L+    +N K       FK A   GL    ++   L+ 
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K G         +E+  R +  +   +N  +N LC  GK  +A   + +M+++G+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
              TYN +I  +C+KG   K  K   +  +M  + I PN +T+NTL+ G      +  A 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALK---LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +  EM S G +   +T+  ++       +LD  + + + MM +GL  ++   N L+   
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C   +  KA V+ +++   G++P  IT+N LI  +CK   +++AFA    ML + + P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +T+N L+ GL   G +     ++ E+  +G+    +TY+IL     K     +A+ L  E
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE 824

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           M     +   P + TYN LI  F + G +  A  L  ++ ++G+ P   TY I+      
Sbjct: 825 MVG---KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSR 881

Query: 514 ----------REEMMEKGFIP 524
                      ++M EKGF P
Sbjct: 882 IRNGTEVKKCLKDMKEKGFSP 902



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 196/413 (47%), Gaps = 35/413 (8%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R    GL   V+  N L+    + G+ +    V   MK   ++ N+ ++   +   C+  
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            + +A D+ E M   GV   VVT + L+ G C+ G   + Y   A+F++M + G  PN V
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY---ALFREMDKVGAAPNHV 310

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+ TLID   K       + +  EM S G+   +VTY +L++ L   GK DE        
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           ++  L PN VT   LI+  CK   V++A  +  ++ E+ +SP+V+T++++I+ + K G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A   +  M +RG+ P+V TY  LI G  +    +    + ++++  G++      + L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 441 VGALCKDGKSKKAV-------------------SLLDEMFK---MEKEKKW--------- 469
           V  L ++GK ++A+                   +L+D +FK   M    K+         
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 470 -PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P+ V YNV I   C  GK ++A   L E+   GL P+Q+TY  +      KG
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 189/363 (52%), Gaps = 10/363 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + + ++ N LL AL           V  EM +R +  +  + N +L GLC+ G+++ A+ 
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           + +     G++P + +   L        G G    A +V   M   G+  + V +NTL+ 
Sbjct: 157 LADRAG--GITPWMSSAGTL--SLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           GFC+   + AA  V + M   G+   V TY   I   C    ++EA  L + M+ +G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +VVT +AL+ G C+     +A  LF ++ + G +P+ +TY TLID+  K GR ++  ++ 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+ RGV+ D+ TY  L+  L ++G  + V++ +   +++ +    VTY +L+ ALCK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
               +A  +L E   ME++   PN+VT++ +I GF ++G L+ A      + E+G+ PN 
Sbjct: 393 HNVDEAEQVLLE---MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 508 TTY 510
            TY
Sbjct: 450 VTY 452



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 48/370 (12%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S N +L   C+   L  A  ++   +     P  V YNIL+        +     A AV 
Sbjct: 75  SLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILL------AALSDHAHAPAVL 123

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENI-------------------------------- 275
            +M + G+  + VT NTL+ G C++  +                                
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFG 183

Query: 276 --SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
              AA+ V + M + G+   VV YN+L+ G C  G++D A  + D M  +G+ PNV T  
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
             I  +C+ K VE+A  L++ +   G+   V+T + L+   C++GR  +A+A+   M   
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P+  TY  LI  L++ G  + + +++ E+V+ G+   LVTY  L+  L K GK+ + 
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE- 362

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             + D +     +   PN VTY VLI   C+   +++A  +L E+ EK + PN  T+  V
Sbjct: 363 --VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 514 REEMMEKGFI 523
               +++G +
Sbjct: 421 INGFVKRGLL 430



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 3/317 (0%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K ++++ N L+  L   G  E  +Y+  EM       +  +   VL    ++ +L+   
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           DI E M + G+   +  YN L+   C  G      KA  V ++M+ +GI P+ +TFN LI
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHG---MTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G CK  ++  A   + +M    I+  + T+N+L+ GL   G++ EA  +  EM  SGL+
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T + L  G  K+    +A  L+ ++  +G  P V TYN LI  + K G M  A  +
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M  RGV P   TY+ L++G SR  N   V+  + ++   G      T + +  A  K
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916

Query: 447 DGKSKKAVSLLDEMFKM 463
            G + +A  LL  ++++
Sbjct: 917 PGMTWQAQRLLKNLYRV 933


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 216/411 (52%), Gaps = 11/411 (2%)

Query: 110 DSLCRNSIIIDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
           + + RN +++D++ L+ +     ++ +    +  F+     G   + ++   L+ +L K 
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
           G+ +++  +  EM  R + ++L ++  +++ L K GK ++  D +    S  +SP  VTY
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            +LID  CK   + +   A+ V  +M E  I PN VTF+++I+GF K   +  A +    
Sbjct: 383 TVLIDALCKAHNVDE---AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   GI   VVTY +LI+G       D A+ +  +M+  G+K N    ++L+NG  +   
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +E+A  LF D S  GLS   + Y TLID   K G M  AF     ++DR +LPD   YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            I  L   G  +  ++ + E+ N G++    TYN ++ + C+ G++ KA+ LL EM KM 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMS 618

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             K  PN++TYN L+ G    G +E A  LLNE++  G  P+  T++ V +
Sbjct: 619 SIK--PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 237/546 (43%), Gaps = 98/546 (17%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L+ SL  A +  ++ S L   V  G    + T + AL        +   + D L  A   
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVT-YTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           N+ P+            G+  +VL     + AL K    ++ E V  EM+ + I  N+ +
Sbjct: 374 NLSPN------------GVTYTVL-----IDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------- 237
           F+ V+NG  K G L+KA++    MK  G++P VVTY  LIDG+ K  G            
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 238 ---------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
                                GK+ +A A+FKD   +G+  + V + TLIDG  K  ++ 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A K  +E+    +    V YN  IN LC+ GK  EA +   EM   GLKP+  T N +I
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
              C+K    KA  L  ++    + P++ITYNTL+      G +E A  + N M+  G  
Sbjct: 597 VSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           P   T+  ++   S+   ++ + +I   ++N G+ A +  YN L+  LC  G ++KA  +
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 457 LDEMF--------------------------------KMEKEKKWPNIVTYNVLIKGFCQ 484
           L+EM                                 +M  +   PNI T+N L+ G   
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIEG 528
            G++ +A  +L E+ + GL PN  TY I+                  EM+ KGF+P +  
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 529 HMYNIS 534
           +   IS
Sbjct: 837 YNALIS 842



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 205/441 (46%), Gaps = 26/441 (5%)

Query: 104 ALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           AL    D LC     N  I+D L+    +N K       FK A   GL    ++   L+ 
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K G         +E+  R +  +   +N  +N LC  GK  +A   + +M+++G+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
              TYN +I  +C+KG   K  K   +  +M  + I PN +T+NTL+ G      +  A 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALK---LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +  EM S G +   +T+  ++       +LD  + + + MM +GL  ++   N L+   
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C   +  KA V+ +++   G++P  IT+N LI  +CK   +++AFA    ML + + P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +T+N L+ GL   G +     ++ E+  +G+    +TY+IL     K     +A+ L  E
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE 824

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------ 513
           M     +   P + TYN LI  F + G +  A  L  ++ ++G+ P   TY I+      
Sbjct: 825 MVG---KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSR 881

Query: 514 ----------REEMMEKGFIP 524
                      ++M EKGF P
Sbjct: 882 IRNGTEVKKCLKDMKEKGFSP 902



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 195/364 (53%), Gaps = 12/364 (3%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + + ++ N LL AL           V  EM +R +  +  + N +L GLC+ G+++ A+ 
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 208 IMEDMKSLGVSP-KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           + +  +  G+    V+ +N LI GYC+   +G    A +V   M   G+  + V +NTL+
Sbjct: 157 LAD--RGGGIHALDVIGWNTLIAGYCR---VGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            GFC+   + AA  V + M   G+   V TY   I   C    ++EA  L + M+ +G+ 
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
            +VVT +AL+ G C+     +A  LF ++ + G +P+ +TY TLID+  K GR ++  ++
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+ RGV+ D+ TY  L+  L ++G  + V++ +   +++ +    VTY +L+ ALCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                +A  +L E   ME++   PN+VT++ +I GF ++G L+ A      + E+G+ PN
Sbjct: 392 AHNVDEAEQVLLE---MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 507 QTTY 510
             TY
Sbjct: 449 VVTY 452



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 219/482 (45%), Gaps = 73/482 (15%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS-SVLSCNQLLRALVKEGK 166
           C   +  + + ++ L+    +N +         R G  G+ +  V+  N L+    + G 
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG--GIHALDVIGWNTLIAGYCRVGD 184

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
                 V   M  + + +++  +N ++ G C+AG+++ A  +++ MK  GV P V TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
            I  YC+  G+ + +    +++ MV NG+L + VT + L+ G C+D   S A  +F EM 
Sbjct: 245 FIVYYCRTKGVEEAFD---LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG---------------------- 324
             G A   VTY +LI+ L   G+  E ++L  EM++ G                      
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 325 -------------LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
                        L PN VT   LI+  CK   V++A  +  ++ E+ +SP+V+T++++I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           + + K G ++ A   +  M +RG+ P+V TY  LI G  +    +    + ++++  G++
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 432 AGLVTYNILVGALCKDGKSKKAV-------------------SLLDEMFK---MEKEKKW 469
                 + LV  L ++GK ++A+                   +L+D +FK   M    K+
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 470 ----------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
                     P+ V YNV I   C  GK ++A   L E+   GL P+Q+TY  +      
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 520 KG 521
           KG
Sbjct: 602 KG 603



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 175/369 (47%), Gaps = 46/369 (12%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S N +L   C+   L  A  ++   +     P  V YNIL+        +     A AV 
Sbjct: 75  SLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILL------AALSDHAHAPAVL 123

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLINGLCV 306
            +M + G+  + VT NTL+ G C++  + AA  + +  G  GI A  V+ +N+LI G C 
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG--GIHALDVIGWNTLIAGYCR 181

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G    A+++ D M A GL  +VV  N L+ GFC+   V+ AR + D + E G+ P+V T
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y   I  YC+   +E+AF +   M+  GVL DV T + L+AGL R+G       +  E+ 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK----------------MEKEKKW- 469
             G     VTY  L+ +L K G+ K+ +SLL EM                  + K+ K  
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 470 ---------------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
                          PN VTY VLI   C+   +++A  +L E+ EK + PN  T+  V 
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 515 EEMMEKGFI 523
              +++G +
Sbjct: 422 NGFVKRGLL 430



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 3/317 (0%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +K ++++ N L+  L   G  E  +Y+  EM       +  +   VL    ++ +L+   
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           DI E M + G+   +  YN L+   C  G      KA  V ++M+ +GI P+ +TFN LI
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHG---MTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G CK  ++  A   + +M    I+  + T+N+L+ GL   G++ EA  +  EM  SGL+
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN +T + L  G  K+    +A  L+ ++  +G  P V TYN LI  + K G M  A  +
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M  RGV P   TY+ L++G SR  N   V+  + ++   G      T + +  A  K
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916

Query: 447 DGKSKKAVSLLDEMFKM 463
            G + +A  LL  ++++
Sbjct: 917 PGMTWQAQRLLKNLYRV 933


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 217/449 (48%), Gaps = 43/449 (9%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           Y    S +H   +   F  V  +   L   S   C  +I I+++   Y    KP      
Sbjct: 95  YDTYDSIIHKLSRARVFGPVELLLSDLHK-SQIKCGENIFINVIR-NYGLAGKPDFALRT 152

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R  D+ ++ SV S N LL A V+  +++ V  ++K  + +                  
Sbjct: 153 FIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSK------------------ 194

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
                            GV P V T NILI   CKK  +    K   V  +M   G++PN
Sbjct: 195 ----------------YGVLPNVFTCNILIKALCKKNDVESAVK---VLDEMPAMGMIPN 235

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+ T++ G+    ++  A KVF E+   G      TY  L+NG C  G+L +A+ L D
Sbjct: 236 VVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMD 295

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           +M  +G++PN VT   ++  +CK+K   +AR L DD+ E+   PS      +ID  C+ G
Sbjct: 296 DMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAG 355

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++E+A  +   ML +  +PD +  + LI  L +EG V   R +  E    G    L+TYN
Sbjct: 356 KIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYN 414

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  +C+ G+  +A  L D+M  MEK  K PN  TYN+LIKGF + G  ++   +L E+
Sbjct: 415 TLIAGMCEKGELSEAGKLWDDM--MEKGYK-PNAFTYNMLIKGFSKIGNAKEGIRILEEM 471

Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           L+   +PN++TY I+ EE+ + G   +++
Sbjct: 472 LDNRCMPNKSTYAILIEELCKMGMEGEVD 500



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 45/340 (13%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           ++ L+ A+V+N +  L    FK     YG+  +V +CN L++AL K+   E    V  EM
Sbjct: 168 LNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEM 227

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               +  N+ ++  +L G    G +  A+ +  ++   G  P   TY IL++GYC++G +
Sbjct: 228 PAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRL 287

Query: 238 GKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
                ADA+    DM ENG+ PNEVT+  +++ +CK++    A  + ++M          
Sbjct: 288 -----ADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSA 342

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMAS-------------------------------- 323
               +I+ LC  GK++EA  L   M+                                  
Sbjct: 343 LCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF 402

Query: 324 --GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G  P+++T N LI G C+K  + +A  L+DD+ E+G  P+  TYN LI  + K G  +
Sbjct: 403 ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAK 462

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGV 418
           +   +   MLD   +P+ STY  LI  L +   EG V+ V
Sbjct: 463 EGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKV 502


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S N ++ AL  E +  +V  V  EM +R ++ N+ ++  +++  CKA +L  A  I+  M
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            S+G +P V+T+  L+ G+ + G   K++ A +++  MV+ G  P+ +++N LI G C  
Sbjct: 284 VSMGCTPNVLTFTALVKGFFEDG---KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 340

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            ++  A+  F  M  + +     TY++L++G    G LD A+ + +EM +SG KPNVV  
Sbjct: 341 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 400

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
             +I+  CKK + ++A  L D +      P+ +T+NTLI   C  GR+  A  + + M  
Sbjct: 401 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 460

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G  P+  TYN L+ GL REGN +    ++ E++NNG    LVTYN ++  LC+    K 
Sbjct: 461 NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKH 520

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A+ LL  M     +   P+  T+N +I  +C++GK+  A  LL ++       N   Y I
Sbjct: 521 AMLLLGRMMVQGIQ---PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 577

Query: 513 VREEMMEKG 521
           +  E+  +G
Sbjct: 578 LISELCNQG 586



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 12/398 (3%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLK-SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           A+ +        + F RA D G +   V   N LL AL++E     V  VY  M++  ++
Sbjct: 95  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 154

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+ ++N ++  LC+  +++ A  ++++M   G  P  V++  ++ G CK   +G++ +A
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCK---LGRVEEA 211

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
                + V     P + ++N ++   C +  +     V  EM   G+   VVTY ++++ 
Sbjct: 212 RGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
            C   +L  A A+   M++ G  PNV+T  AL+ GF +   V  A  ++  + ++G +PS
Sbjct: 267 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 326

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I+YN LI   C  G ++ A    NSM    +LP+ +TY+ L+ G S  G+++G   I N
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
           E+ ++G +  +V Y  ++  LCK     +A SL+D   KM  +   PN VT+N LI   C
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID---KMLMDNCPPNTVTFNTLIGRLC 443

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             G++  A  + + +   G  PN  TY  +   +  +G
Sbjct: 444 DCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 481



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 181/368 (49%), Gaps = 12/368 (3%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G   S       +R L   G  + V+Y  +EM+ R +    D+    +    +AG  +
Sbjct: 44  DPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSAD 103

Query: 204 KASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           +A         LG   P V  YN L+D   ++  +G +     V+ +M + G+ PN  T+
Sbjct: 104 RALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVP---VYDNMRKAGVDPNVYTY 160

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI   C+++ + AA K+ +EM   G     V++ ++++G+C  G+++EA     E + 
Sbjct: 161 NLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV- 219

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
               P   + NA+++  C +  + +   + +++ ++GL P+V+TY T++DA+CK   +  
Sbjct: 220 ----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRM 275

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A A+   M+  G  P+V T+  L+ G   +G V    ++ + +V+ G     ++YN+L+ 
Sbjct: 276 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIR 335

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC  G  K A   LD    M++    PN  TY+ L+ GF   G L+ A  + NE+   G
Sbjct: 336 GLCCIGDLKGA---LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392

Query: 503 LIPNQTTY 510
             PN   Y
Sbjct: 393 CKPNVVVY 400



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 171/369 (46%), Gaps = 43/369 (11%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    L+  + ++ K H     +    D G   S +S N L+R L   G  +     +
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
             MKR  +  N  +++ +++G   AG L+ A  I  +MKS G  P VV Y  +ID  CKK
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 410

Query: 235 GGIGKMY-KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                M+ +A+++   M+ +   PN VTFNTLI   C    +  A+ VF  M  +G    
Sbjct: 411 ----MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             TYN L++GL  +G   +A A+  EM+ +G + ++VT N +IN  C+  + + A +L  
Sbjct: 467 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 526

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  QG+ P   T+N +I AYCKEG+                   VS   CL+  ++   
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGK-------------------VSIAACLLGQMNA-- 565

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V   RN+             V Y IL+  LC  GK   A+  L    KM  E   PN  
Sbjct: 566 -VNCPRNV-------------VAYTILISELCNQGKLSNAMVYL---LKMLYEGICPNEA 608

Query: 474 TYNVLIKGF 482
           T+NVL++  
Sbjct: 609 TWNVLVRAI 617



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 13/255 (5%)

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL---KPNVV 330
           ++       +EM   G+A       + I      G  D A  L+    AS L    P V 
Sbjct: 66  DVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRA--LKTFYRASDLGCRDPGVR 123

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             N L++   ++ +V     ++D++ + G+ P+V TYN LI A C+  R++ A  M + M
Sbjct: 124 VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 183

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
             +G  PD  ++  +++G+ + G VE  R  + E V         +YN +V ALC + + 
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRM 238

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +  S+++EM +   +   PN+VTY  ++  FC+  +L  A  +L  ++  G  PN  T+
Sbjct: 239 WEVFSVVNEMVQRGLQ---PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295

Query: 511 QIVREEMMEKGFIPD 525
             + +   E G + D
Sbjct: 296 TALVKGFFEDGKVHD 310



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR-AGLVTYNILVGALCKDGKSK 451
           RGV          I   +R G+ +          + G R  G+  YN L+ AL ++    
Sbjct: 80  RGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVG 139

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
             V + D M K   +   PN+ TYN+LI+  CQ  +++ A  +L+E+  KG  P++ ++ 
Sbjct: 140 AVVPVYDNMRKAGVD---PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG 196

Query: 512 IVREEMMEKGFIPDIEGHM 530
            +   M + G + +  G +
Sbjct: 197 TIVSGMCKLGRVEEARGFL 215


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 200/360 (55%), Gaps = 12/360 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+RA    G+ +    + +EM+++  +      +NF ++ LCK+GK+ +A +++++MK  
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
              P VVT+N LI G CK G   ++ +A  V  +M  +G   N VT+NTLI+G       
Sbjct: 84  ACKPDVVTFNTLIAGLCKAG---RLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPNVVTSNA 334
             A+ V + M +        TYN++I+G C  G++D A    +EM   +G  P+  T + 
Sbjct: 141 GEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197

Query: 335 LINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
           LING CK   + KA  L  + I  +    SV+ +NTL+D YCK   ++ A  + +SML+ 
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  PDV TY+ +I GL R G+V+    ++ ++V+ G +  +VTY +LV  LCK GK  +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L+  M    ++   PN VTY+++  G C+  KL+ AN LL  + +KG + +   ++ +
Sbjct: 318 CRLVKRML---EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETL 374



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 11/327 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N  + AL K GK  +   V K MK    + ++ +FN ++ GLCKAG+L++A  ++++M+ 
Sbjct: 58  NFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER 117

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +  +VTYN LI+G    G  G+   A  V + M      P+  T+N +I GFCK   
Sbjct: 118 SGFAANLVTYNTLINGLSSAGRSGE---AVLVMQGMTTT---PDTQTYNAIIHGFCKSGE 171

Query: 275 ISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA-SGLKPNVVTS 332
           I  A    EEM    G +    TY+ LINGLC    L +A  L  EM+       +VV  
Sbjct: 172 IDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L++G+CK + +++AR L   + E G +P V+TY+T+ID  C+ G ++  FA+   M+ 
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS 291

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  PDV TY  L+ GL + G +     ++  ++ +G     VTY+++   LCK  K   
Sbjct: 292 RGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDM 351

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           A  LL     +  + +  ++V +  L+
Sbjct: 352 ANDLLTS---IRDKGRVTDVVAFETLL 375



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 8/319 (2%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A  K+ K     E  K   D   K  V++ N L+  L K G+ ++ + V  EM+R     
Sbjct: 63  ALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           NL ++N ++NGL  AG+  +A  +M+ M +   +P   TYN +I G+CK G I + Y   
Sbjct: 123 NLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAY--- 176

Query: 245 AVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLIN 302
              ++M +  G  P+  T++ LI+G CK  N+  A ++ +EM G     A VV +N+L++
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C    LD A  L   M+  G  P+VVT + +I+G C+   V+K   L + +  +G  P
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            V+TY  L+   CK G+M +A  +   ML+ G  P+  TY+ +  GL +   ++   +++
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356

Query: 423 NELVNNGMRAGLVTYNILV 441
             + + G    +V +  L+
Sbjct: 357 TSIRDKGRVTDVVAFETLL 375



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 12/302 (3%)

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKV 281
           TY +L+  +C  G   ++  A  + ++M +  G+ P    +N  +   CK   +  AM+V
Sbjct: 20  TYFVLVRAHCLAG---ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            + M        VVT+N+LI GLC  G+LDEA  + DEM  SG   N+VT N LING   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVS 400
                +A ++   ++    +P   TYN +I  +CK G ++ A+     M  R G  PD  
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           TY+ LI GL +  N+     ++ E++      A +V +N LV   CK     +A  LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           M +       P++VTY+ +I G C+ G ++    LL +++ +G  P+  TY ++   + +
Sbjct: 254 MLE---HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 520 KG 521
            G
Sbjct: 311 AG 312



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 23/293 (7%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           T+  L+   C    + AAM +  EM    G+A     YN  ++ LC  GK+ EA+ +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M     KP+VVT N LI G CK   +++A+ + D++   G + +++TYNTLI+     GR
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYN 438
             +A  +   M      PD  TYN +I G  + G ++     + E+    G      TY+
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+  LCK    +KA  LL EM  + ++    ++V +N L+ G+C+   L+ A  LL+ +
Sbjct: 197 ILINGLCKSSNLRKADELLQEM--IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254

Query: 499 LEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNISG 535
           LE G  P+  TY  +                 E+M+ +G  PD+  +   ++G
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 5/193 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSL 215
           L+  L K       + + +EM  R+    ++ +FN +++G CKA  L++A +++  M   
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G +P VVTY+ +IDG C+ G + K +   A+ + MV  G  P+ VT+  L+ G CK   +
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGF---ALLEKMVSRGCKPDVVTYTVLVTGLCKAGKM 314

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A ++ + M   G     VTY+ + +GLC   KLD A  L   +   G   +VV    L
Sbjct: 315 VEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETL 374

Query: 336 INGFCKKKLVEKA 348
           +    KK+L+++A
Sbjct: 375 LLSV-KKRLLDRA 386



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAV 454
           L D  TY  L+      G ++   +++ E+    GM      YN  V ALCK GK  +A+
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            ++     M+     P++VT+N LI G C+ G+L++A  +L+E+   G   N  TY
Sbjct: 75  EVVK---NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTY 127


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 230/472 (48%), Gaps = 35/472 (7%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  ++    YP      S +H + K+  F+    +   +  C    C+   ++  +++
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE---CKPGYVVYNILI 420

Query: 125 AYV---KNMKPHLGFEAFKRAGDYGLKSSVL----SCNQLLRALVKEGKFEDVEYVYKEM 177
             +     +   + FE  ++A +  L +  +    +     R L   GKFE    V  EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
                  +  +++ V+  LC A ++  A  + ++MK  GV P V TY ILID + K G I
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            +   A     +MV +G  P  VT+ TLI  + K + +S A ++FE M + G    V+TY
Sbjct: 541 KQ---AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASG----------------LKPNVVTSNALINGFCK 341
            +LI+G C  G +++A  +   M                     KPNVVT  AL++G CK
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V+ AR L + +   G  P+ I Y+ LID +CK  ++++A  + + M++RG  P+V T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++ V  ++++++ N     +V Y  ++  L K  K+ +A  L   M 
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL---ML 774

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ME++   PN+VTY  +I GF + GK++    L  E+  KG  PN  TY ++
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 225/481 (46%), Gaps = 35/481 (7%)

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL---STCSDSLCR 114
           +A + +L  G +L+ + V        SF       GKF     + H +       D+   
Sbjct: 440 KAYNEMLSAGTVLNKVNVV-------SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY 492

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +I  +   + V+N      F  FK     G+   V +   L+    K G  +      
Sbjct: 493 SEVIGFLCNASRVEN-----AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R   E  + ++  +++   KA K++ A+++ E M + G  P V+TY  LIDGYCK 
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607

Query: 235 GGIGKM------YKADAVFKDM-----VENGIL--PNEVTFNTLIDGFCKDENISAAMKV 281
           G I K        + DA   D+     ++N +   PN VT+  L+DG CK   +  A  +
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E M   G     + Y++LI+G C   KLDEA  +  +M+  G  PNV T ++LI+   K
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFK 727

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            K ++    +   + E   +P+++ Y  +ID   K  + ++A+ +   M ++G  P+V T
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  +I G  + G V+    +  E+ + G     VTY +L+   C  G   +A +LL+EM 
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM- 846

Query: 462 KMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
              K+  WP ++ +Y  +I+G+  K +   + GLL E+ + G  P    Y+++ +  ++ 
Sbjct: 847 ---KQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKA 901

Query: 521 G 521
           G
Sbjct: 902 G 902



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 244/552 (44%), Gaps = 78/552 (14%)

Query: 13  TELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           T ++      KL N D    IL    S   P L +++F W+ +++   H+  +   LL  
Sbjct: 125 THIVLRQFRQKL-NPDLVVEILSFLKS---PELCVKFFLWAGRQIGYDHTPAVYIALL-D 179

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           +     Y ++      F++  +      +   L+      CRN +               
Sbjct: 180 VFERGSYDRVP---EEFLREIRGDDKEVLGKLLNVLIRKCCRNGLW-------------- 222

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF--- 189
           ++  E   R  D+G K + ++ N L++  ++  K +  + V++EM    + L++D F   
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS--ELGLSMDEFTLG 280

Query: 190 -------------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
                                          N +++GLC+A    +A D +  M+S    
Sbjct: 281 FFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI 340

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY IL+ G   K  +G+  +   +   M+  G  P+   FN+L+  +CK ++ S A
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKR---ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA 397

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR------DEMMASGL---KPNV 329
            K+ ++M       G V YN LI  +C  G+L   V         +EM+++G    K NV
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+    + GF K    EKA  +  ++   G  P   TY+ +I   C   R+E+AF +   
Sbjct: 458 VSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   GV+PDV TY  LI   S+ G ++   N ++E+V +G    +VTY  L+ A  K   
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK--- 571

Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             K VS+ +E+F++   K  +PN++TY  LI G+C+ G +E A  +   +     IP+  
Sbjct: 572 -AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630

Query: 509 TYQIVREEMMEK 520
            Y  ++  + EK
Sbjct: 631 MYFKIKNNVAEK 642



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 198/437 (45%), Gaps = 52/437 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN-------SIIIDM 121
           L+H+ + AKK         + +  G F +V T + AL    D  C++        I   M
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVIT-YTALI---DGYCKSGNIEKACQIYARM 620

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
              A + ++  +     FK   +   K +V++   L+  L K  K +D   + + M    
Sbjct: 621 RGDADIPDVDMY-----FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK------- 234
            E N   ++ +++G CKA KL++A ++   M   G +P V TY+ LID   K        
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVL 735

Query: 235 ----------------------GGIGKMYKADAVFKDMV---ENGILPNEVTFNTLIDGF 269
                                  G+ K+ K D  +K M+   E G  PN VT+  +IDGF
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K   +   +++F EMGS G A   VTY  LIN  C  G LDEA AL +EM  +    +V
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            +   +I G+ ++ ++     L +++ + G +P+++ Y  LID + K GR+E A  +   
Sbjct: 856 SSYCKVIEGYKREFILSLG--LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKE 913

Query: 390 MLDR--GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           ++     +    + Y  LI   S    ++    +  +++ +G+   L T+  L+  L + 
Sbjct: 914 VISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRV 973

Query: 448 GKSKKAVSLLDEMFKME 464
            + ++A+ L D + +M+
Sbjct: 974 RRWEEALQLSDSLCQMD 990



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 15/341 (4%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            N ++   C+ G  N A + +  +K  G  P  +TYN L+  + +     K+  A  V +
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRAD---KLDTAQLVHR 265

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M E G+  +E T        CK      A+ + E+          + YN +I+GLC   
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEAS 322

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +EA+   + M ++   PNV T   L+ G   KK + + + +   +  +G  PS   +N
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG------VRNIM 422
           +L+ AYCK      A+ +   M      P    YN LI  +   G + G           
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           NE+++ G     V        LC  GK +KA  ++ EM         P+  TY+ +I   
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM---GNGFVPDTSTYSEVIGFL 499

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           C   ++E+A  L  E+   G++P+  TY I+ +   + G I
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 135/296 (45%), Gaps = 8/296 (2%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML-AYV 127
           + H +V     P + ++  +  +  K   +  +   LS   ++ C  +I+I   M+    
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  K    ++      + G K +V++   ++    K GK +    +++EM  +    N  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++N  C  G L++A  ++E+MK       V +Y  +I+GY K+  I  +     + 
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFILSL----GLL 876

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLC 305
           +++ +NG  P  + +  LID F K   +  A+++ +E+   S  + A    Y SLI    
Sbjct: 877 EEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFS 936

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
              K+D A  L  +M+  G+ P++ T   L+ G  + +  E+A  L D + +  ++
Sbjct: 937 YASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 162/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A VLFD++ ++GL P+ +T
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G + + F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANV 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E++ KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKITY 314



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY                 ++ 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 213/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            LMLAY+++       + F+    + +     +C ++L  L+K   F  V   YKE+   
Sbjct: 71  GLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +    + P VV++N L++GY + G + + 
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M   G+ P+  T++ LI+G CK+  +  A ++  EM  +G+    VT+ +L
Sbjct: 191 FRLKSA---MHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +GK+D A+ +  +M++ G  P+++T N LI G C++  + +AR L +++  +GL
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E  F +R  M+   +  D  TY  LI+GL REG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E++  G++    TY +++   CK G  K A  LL E   M++    P +VT
Sbjct: 368 MLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLRE---MQRNGPVPGVVT 418



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A ++ G   D    ++  K+ +I +  D+   VL  L K           +++   G
Sbjct: 72  LMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECG 131

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +  +NIL+  +CK+G   +M  A  VF  + +  + P+ V+FNTL++G+ +  ++ 
Sbjct: 132 YPPSLYFFNILMHRFCKEG---EMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLD 188

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++   M + G+   V TY+ LINGLC + K+DEA  + +EM+ +GL PN VT   LI
Sbjct: 189 EGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLI 248

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK   V+ A  ++  +  QG  P +ITYNTLI   C+ G +  A  +   M+ +G+ 
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLK 308

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  TY  LI G  +EG++E    +   ++   +R   VTY  L+  LC++G++  A  +
Sbjct: 309 PDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKM 368

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           L EM  +  +   P+  TY +++  FC+ G ++ A+ LL E+   G +P   T
Sbjct: 369 LREMLTVGLK---PDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 162/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G  P+   FN L+  FCK+  +  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M A+G++P+V T + LING CK+  +++A  + +++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK G+++ A  +   ML +G LPD+ TYN LI GL R G++   R+++ E++
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        L+  F++ K     NI    VTY  LI G 
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGD-------LEITFELRKRMIRENIRLDEVTYTALISGL 356

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           C++G+  DA  +L E+L  GL P+  TY ++  E  + G
Sbjct: 357 CREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTG 395


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +L  +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYKPSVVT 418



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 189/363 (52%), Gaps = 6/363 (1%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L+S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K        
Sbjct: 62  LRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL+
Sbjct: 122 GFYEENLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLM 178

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           +G+ K  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL 
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
            + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC+
Sbjct: 299 IDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G  P+
Sbjct: 359 EGRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPS 415

Query: 507 QTT 509
             T
Sbjct: 416 VVT 418



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 161/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A VLFD++ ++GL P+ +T
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++    TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 145/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G L +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G + + F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANV 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E++ KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKFTY 314



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SEQ--GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E    L   +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY                 ++ 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 203/371 (54%), Gaps = 10/371 (2%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+  N++L +      +     +   ++ + I+ +  + N ++N  C  G++N    ++ 
Sbjct: 70  VIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLA 129

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGF 269
            +   G  P  +T+  LI G C KG + K       F D ++  GI  ++V++ TLI+G 
Sbjct: 130 KILKRGYQPHTITFTTLIKGLCLKGQVNKALH----FHDKLLAQGIKFDQVSYGTLINGV 185

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK  +   A+K+  ++        V  YN++I+ LC    + EA  L  EM A G+  NV
Sbjct: 186 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANV 245

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ N +I GFCK K+V++A  LF ++ ++ + P+++TY +L+D  CK GR+   + + + 
Sbjct: 246 VSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDE 305

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M DRG+  DV TYN LI GL + G+++    + N++ +   R   +T+ IL+  LCK G+
Sbjct: 306 MHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD--XRFDRLTFTILLDGLCKGGR 363

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            K A  +  ++   E +    ++  YNV+I G+C++G LE+A  + +++ + G IP+  T
Sbjct: 364 LKDAQEVFQDLLTKEYDL---DVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVT 420

Query: 510 YQIVREEMMEK 520
           ++I+   + EK
Sbjct: 421 FEIIINALFEK 431



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 187/363 (51%), Gaps = 16/363 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++    + N L+      G+      V  ++ +R  + +  +F  ++ GLC  G++NKA
Sbjct: 100 GIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 159

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKADAVFKDMVENGILPNEVT 261
               + + + G+    V+Y  LI+G CK    +G I  + K D            PN   
Sbjct: 160 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTK-------PNVEM 212

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NT+ID  CK + +S A  +F EM + GI+A VV+YN +I G C    +DEA+ L  EM 
Sbjct: 213 YNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMH 272

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
              + P +VT  +L++G CK   +     L D++ ++G+   VITYN+LID  CK G ++
Sbjct: 273 QKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLD 332

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A A+ N M D     D  T+  L+ GL + G ++  + +  +L+       +  YN+++
Sbjct: 333 RAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMI 390

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK G  ++A+++     KME     P+ VT+ ++I    +K + + A  LL+E++ +
Sbjct: 391 NGYCKQGLLEEALTMRS---KMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIAR 447

Query: 502 GLI 504
           GL+
Sbjct: 448 GLL 450



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 197/394 (50%), Gaps = 10/394 (2%)

Query: 70  LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
            +S++  +  P +  F   L  F     +++  ++ H L      +  +   +++LM  +
Sbjct: 58  FNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLEL--KGIQPDFFTLNILMNCF 115

Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
               + + GF    +    G +   ++   L++ L  +G+     + + ++  + I+ + 
Sbjct: 116 CHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQ 175

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
            S+  ++NG+CK G    A  ++  +      P V  YN +ID  CK   + + Y    +
Sbjct: 176 VSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY---GL 232

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F +M   GI  N V++N +I GFCK + +  A+ +F+EM    +   +VTY SL++GLC 
Sbjct: 233 FSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCK 292

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G++     L DEM   G+  +V+T N+LI+G CK   +++A  LF+ + +       +T
Sbjct: 293 SGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRFDR--LT 350

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           +  L+D  CK GR++DA  +   +L +    DV  YN +I G  ++G +E    + +++ 
Sbjct: 351 FTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKME 410

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +NG     VT+ I++ AL +  ++ KA  LL EM
Sbjct: 411 DNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 138/282 (48%), Gaps = 5/282 (1%)

Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           DAV  F  M+     P  + FN ++D F   ++ S A+ +   +   GI     T N L+
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILM 112

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N  C  G+++   ++  +++  G +P+ +T   LI G C K  V KA    D +  QG+ 
Sbjct: 113 NCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 172

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              ++Y TLI+  CK G    A  +   +  R   P+V  YN +I  L +   V     +
Sbjct: 173 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 232

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            +E+   G+ A +V+YNI++   CK     +A++L  E   M ++   P IVTY  L+ G
Sbjct: 233 FSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKE---MHQKNMVPTIVTYGSLMDG 289

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            C+ G++     L++E+ ++G+  +  TY  + + + + G +
Sbjct: 290 LCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHL 331



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 134/255 (52%), Gaps = 19/255 (7%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +T  D+LC+  ++ +               +  F      G+ ++V+S N +++   K  
Sbjct: 214 NTIIDALCKYQLVSE--------------AYGLFSEMTAKGISANVVSYNIMIKGFCKSK 259

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
             ++   ++KEM ++ +   + ++  +++GLCK+G+++   +++++M   G+   V+TYN
Sbjct: 260 MVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYN 319

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LIDG CK G + +   A A+F  M +     + +TF  L+DG CK   +  A +VF+++
Sbjct: 320 SLIDGLCKNGHLDR---AIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDL 374

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
            +      V  YN +ING C  G L+EA+ +R +M  +G  P+ VT   +IN   +K   
Sbjct: 375 LTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDEN 434

Query: 346 EKARVLFDDISEQGL 360
           +KA  L  ++  +GL
Sbjct: 435 DKAEKLLHEMIARGL 449



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 3/251 (1%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +N+  A+  F  M        V+ +N +++          AV+L   +   G++P+  T 
Sbjct: 49  QNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTL 108

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+N FC    +     +   I ++G  P  IT+ TLI   C +G++  A    + +L 
Sbjct: 109 NILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 168

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           +G+  D  +Y  LI G+ + G+  G   ++ ++     +  +  YN ++ ALCK     +
Sbjct: 169 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 228

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  L  E   M  +    N+V+YN++IKGFC+   +++A  L  E+ +K ++P   TY  
Sbjct: 229 AYGLFSE---MTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGS 285

Query: 513 VREEMMEKGFI 523
           + + + + G I
Sbjct: 286 LMDGLCKSGRI 296



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 79/168 (47%), Gaps = 3/168 (1%)

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           +P VI +N ++D++        A ++ + +  +G+ PD  T N L+      G +    +
Sbjct: 67  TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ +++  G +   +T+  L+  LC  G+  KA+   D++  + +  K+   V+Y  LI 
Sbjct: 127 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL--LAQGIKFDQ-VSYGTLIN 183

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           G C+ G    A  L+ ++  +   PN   Y  + + + +   + +  G
Sbjct: 184 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 231


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 223/451 (49%), Gaps = 50/451 (11%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           NSI  + L+  Y  +   +     FK+    G+  +V +CN  + AL K G+  + + ++
Sbjct: 314 NSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIF 373

Query: 175 KEMK--------------------------------------RRRIELNLDSFNFVLNGL 196
             M                                        + I  N   FN ++N  
Sbjct: 374 DSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAY 433

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            + G ++KA  I EDM++ G+ P  VT+  +I   C+   IG++  A   F  MV+ G+ 
Sbjct: 434 ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLDDALHKFNHMVDIGVP 490

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA-GVVTYNSLINGLCVDGKLDEAVA 315
           P+E  +  LI G C    +  A ++  EM +  I   GV  ++S+IN LC +G++ E   
Sbjct: 491 PSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKD 550

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + D M+ +G +PNVVT N+L+ G+C    +E+A  L D ++  G+ P+   Y TL+D YC
Sbjct: 551 IMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 610

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K GR++DA  +   ML +GV P    Y+ ++ GL +       + + +E++ +G    + 
Sbjct: 611 KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH 670

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TY +++G LC++  + +A  LL+++F M  +    +I+T+N++I    + G+ ++A  L 
Sbjct: 671 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF---DIITFNIVISAMFKVGRRQEAKELF 727

Query: 496 NELLEKGLIPNQTTYQ-----IVREEMMEKG 521
           + +   GL+PN  TY      +++EE  E+ 
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 758



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 210/408 (51%), Gaps = 10/408 (2%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  +VK+ +       F    + G+   +L CN +++ L K  + +  E + ++M    
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  +L +++ +++GLCK+  ++KA  ++E M   G  P  +TYN LI GY   G   +  
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +   VFK M   G++P     N+ I    K    + A  +F+ M   G    +++Y++  
Sbjct: 336 R---VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNA 392

Query: 302 NGLCVDGKLDEAVALR---DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           + +C        V      + M+  G+ PN    N LIN + +  +++KA ++F+D+  +
Sbjct: 393 SWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 452

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P  +T+ T+I + C+ GR++DA    N M+D GV P  + Y CLI G    G +   
Sbjct: 453 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 512

Query: 419 RNIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
           + +++E++N  +   G+  ++ ++  LCK+G+  +   ++D M +  +    PN+VT+N 
Sbjct: 513 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR---PNVVTFNS 569

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           L++G+C  G +E+A  LL+ +   G+ PN   Y  + +   + G I D
Sbjct: 570 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 617



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 4/315 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++  L KEG+  + + +   M +     N+ +FN ++ G C  G + +A  +++ M S
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 592

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P    Y  L+DGYCK G I     A  VF+DM+  G+ P  V ++ ++ G  +   
Sbjct: 593 IGIEPNCYIYGTLVDGYCKNGRIDD---ALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            +AA K+F EM   G    + TY  ++ GLC +   DEA  L +++ A  +K +++T N 
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 709

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +I+   K    ++A+ LFD IS  GL P++ TY+ +I    KE   E+A  +  S+   G
Sbjct: 710 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 769

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
              D    N ++  L  +  V    N ++ +  N +     T ++L     ++GK ++ +
Sbjct: 770 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHI 829

Query: 455 SLLDEMFKMEKEKKW 469
            LL   ++   E  W
Sbjct: 830 KLLPAKYQF-FEGAW 843



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 10/310 (3%)

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKAD---AVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           P + TYNILID Y       ++++ D   A+   +++NG+ P++ ++ +LI GF KD  +
Sbjct: 174 PTIHTYNILIDCY------RRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEV 226

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  +F EM   G+   ++  NS+I  LC   ++D+A ++  +M+ SG+ P++ T + +
Sbjct: 227 DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLI 286

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I+G CK K ++KA  + + + E G  P+ ITYN+LI  Y   G   ++  +   M   GV
Sbjct: 287 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 346

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P V   N  I  L + G     + I + +V  G +  +++Y+     +C    +   V 
Sbjct: 347 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVM 406

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             +    M  +   PN   +N+LI  + + G ++ A  +  ++  KG+IP+  T+  V  
Sbjct: 407 WHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 466

Query: 516 EMMEKGFIPD 525
            +   G + D
Sbjct: 467 SLCRIGRLDD 476



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/472 (21%), Positives = 223/472 (47%), Gaps = 17/472 (3%)

Query: 61  HSLLLTGR------LLHSLVVAKKYPKIRSFL--HMFVKNGKFTSVSTIFHALSTC--SD 110
           H+L   GR      +  S+V+    P I S+     +V     T V  ++H +     + 
Sbjct: 358 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTK 417

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
            +  N  + ++L+ AY +          F+   + G+    ++   ++ +L + G+ +D 
Sbjct: 418 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 477

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY-NILID 229
            + +  M    +  +   +  ++ G C  G+L KA +++ +M +  + P  V Y + +I+
Sbjct: 478 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 537

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK+G   ++ +   +   MV+ G  PN VTFN+L++G+C   N+  A  + + M S G
Sbjct: 538 NLCKEG---RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I      Y +L++G C +G++D+A+ +  +M+  G+KP  V  + +++G  + +    A+
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 654

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F ++ E G + S+ TY  ++   C+    ++A  +   +    V  D+ T+N +I+ +
Sbjct: 655 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 714

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G  +  + + + +   G+   + TY++++  L K+   ++A +L      +EK    
Sbjct: 715 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF---ISVEKSGHA 771

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +    N +++    K ++  A+  L+ + E  L    +T  ++      +G
Sbjct: 772 SDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 823


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 210/435 (48%), Gaps = 73/435 (16%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR----------------- 179
           +   R   YG +   +S   +L+ L    ++EDVE ++ EM                   
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 180 -------RRIEL-----------NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
                  R IE+           N    N V+N +CK G+++ A + + +M S G SP  
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           ++Y  ++ G C+ G   +   A  +  +MV     PNEVTFNT I   C+   I  A+ +
Sbjct: 348 ISYTTVLKGLCRAG---RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD----------------------- 318
            E+M  +G + G+VTYN+L+NG CV G++D A+ L +                       
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAER 464

Query: 319 ---------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
                    EMM +    NVVT N L++ FC+K  VE+A  L   + E G +P++IT+NT
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNT 524

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+D   ++   E+A  + + ++ +G+  D  TY+ ++  LSRE  +E    + + + + G
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           MR   V YN ++ ALCK  ++ +A+     M         PN  TY +LI+G  ++G L+
Sbjct: 585 MRPKAVMYNKILSALCKRCETDRAIDFFAHMVS---NSCMPNESTYVILIEGLAREGLLK 641

Query: 490 DANGLLNELLEKGLI 504
           +A  +L+EL  +G++
Sbjct: 642 EARYVLSELCSRGVL 656



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 192/372 (51%), Gaps = 12/372 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            + A   G    V + N L+    + G+ +    +   M    +  +  ++  ++ GLC 
Sbjct: 93  LRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCD 149

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++  A  +++DM      P VVTY +L++  CK  G G+  K   V  +M   G  PN
Sbjct: 150 RGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMK---VLDEMRAKGCTPN 206

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+N +I+G C+++ +  A ++   + S+G     V+Y +++ GLC   + ++   L  
Sbjct: 207 IVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFC 266

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+ +   PN VT + L+  FC+  +VE+A  + D +SE G + +    N +I++ CK+G
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R++DAF   N+M   G  PD  +Y  ++ GL R G  E  + ++NE+V        VT+N
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             +  LC+ G   +A+ L+++   M +      IVTYN L+ GFC +G+++ A  L N L
Sbjct: 387 TFICILCQKGLIDQAILLIEQ---MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443

Query: 499 LEKGLIPNQTTY 510
             +   PN  TY
Sbjct: 444 PCE---PNTITY 452



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 9/332 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++  LC+ G+ + A+ ++   +  G    V  YN L+ GYC+ G      + DA  + + 
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYG------RLDAARRLIA 129

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + P+  T+  LI G C    +  A+ + ++M        VVTY  L+  +C      
Sbjct: 130 SMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFG 189

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A+ + DEM A G  PN+VT N +ING C++  V+ AR + + +S  G  P  ++Y T++
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              C   R ED   +   M++   +P+  T++ L+    R G VE    +++ +  +G  
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           A     NI++ ++CK G+   A   L+ M         P+ ++Y  ++KG C+ G+ EDA
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCS---PDTISYTTVLKGLCRAGRWEDA 366

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             LLNE++ K   PN+ T+      + +KG I
Sbjct: 367 KELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 180/346 (52%), Gaps = 6/346 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+ + ++++ +  K  +    FE     G YG     +S   +L+ L + G++ED + + 
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R+    N  +FN  +  LC+ G +++A  ++E M   G S  +VTYN L++G+C +
Sbjct: 371 NEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQ 430

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G      + D+  +        PN +T+ TL+ G C  E + AA ++  EM  +     V
Sbjct: 431 G------RVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VT+N L++  C  G ++EA+ L  +MM  G  PN++T N L++G  +    E+A  L   
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHG 544

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G+S   ITY++++D   +E R+E+A  M +++ D G+ P    YN +++ L +   
Sbjct: 545 LVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCE 604

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +   +    +V+N       TY IL+  L ++G  K+A  +L E+
Sbjct: 605 TDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 6/286 (2%)

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + +A  + +     G  P+      LI   C+    S A +V       G    V  YN+
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+ G C  G+LD A   R  + +  + P+  T   LI G C +  V  A  L DD+  + 
Sbjct: 111 LVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
             PSV+TY  L++A CK      A  + + M  +G  P++ TYN +I G+ RE  V+  R
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            I+N L + G +   V+Y  ++  LC   + +    L  EM +       PN VT+++L+
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE---NNCVPNEVTFDMLV 284

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           + FC+ G +E A  +L+ + E G   N T   IV   + ++G + D
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           ++++ A ++ E   S G A  V     LI  LC  G+  +A  +      SG   +V   
Sbjct: 49  DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+ G+C+   ++ AR L   I+   + P   TY  LI   C  GR+ DA ++ + ML 
Sbjct: 109 NTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           R   P V TY  L+  + +         +++E+   G    +VTYN+++  +C++ +   
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  +L+   ++      P+ V+Y  ++KG C   + ED   L  E++E   +PN+ T+ +
Sbjct: 226 ARQILN---RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282

Query: 513 V 513
           +
Sbjct: 283 L 283



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L EA  L +   + G  P+V     LI   C++     A  +       G    V  YNT
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+  YC+ GR++ A  +  SM    V PD  TY  LI GL   G V    +++++++   
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
            +  +VTY +L+ A+CK     +A+ +LDEM     +   PNIVTYNV+I G C++ +++
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM---RAKGCTPNIVTYNVIINGMCREDRVD 224

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           DA  +LN L   G  P+  +Y  V + +       D+E
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 230/489 (47%), Gaps = 77/489 (15%)

Query: 95  FTSVSTIFHALS--TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVL 152
            +++ ++  A+S  T   +LCR   +   L L  V + +P L             + + +
Sbjct: 47  LSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS-----------RPNAI 95

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           S   L+RAL  + +      + + M+   +  ++ ++  ++ GLC A  ++ A +++ +M
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 213 KSLGVSPKVVTYNILIDGYCKKG---GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
              G+ P VV Y+ L+ GYCK G    +GK      VF++M   GI P+ V +  LID  
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGK------VFEEMSGRGIEPDVVMYTALIDSL 209

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+   +  A +V + M   G+   VVTYN LIN +C +G + EA+ LR  M   G++P+V
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269

Query: 330 VTSNALINGFCKKKLVEKARVLFDDI--SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           VT N LI G      +++A  L +++   E  + P ++T+N++I   CK G M  A  +R
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M + G   ++  +N LI GL R   V+    +M+E+ ++G++    TY+IL+   CK 
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKM 389

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE---------- 497
            + ++A S L EM     E   P  V Y  L+K  C +G +  A  L NE          
Sbjct: 390 RQVERAESYLSEMRHQGME---PEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAA 446

Query: 498 ------------------------LLEKGLIPNQTTYQI----------------VREEM 517
                                   ++++GLIP+  TY I                V ++M
Sbjct: 447 AYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQM 506

Query: 518 MEKGFIPDI 526
              GF+PD+
Sbjct: 507 TASGFVPDV 515



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 202/369 (54%), Gaps = 9/369 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V+  + LL    K G++E V  V++EM  R IE ++  +  +++ LC+ GK+ 
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA+ +M+ M   G+ P VVTYN+LI+  CK+G +    +A  + K+M E G+ P+ VT+N
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSV---REALDLRKNMSEKGVQPDVVTYN 273

Query: 264 TLIDGFCKDENISAAMKVFEEM--GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           TLI G      +  AM + EEM  G   +   ++T+NS+I+GLC  G + +A+ +R  M 
Sbjct: 274 TLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMA 333

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G + N+V  N LI G  +   V+KA  L D+++  GL P   TY+ LI+ +CK  ++E
Sbjct: 334 ENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVE 393

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
            A +  + M  +G+ P+   Y  L+  +  +G +   R++ NE+  N  +     Y+ ++
Sbjct: 394 RAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMI 452

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
               K G+ K A   L +M     E   P+ VTY++ I  F + G L  A  +L ++   
Sbjct: 453 HGAFKSGEKKIAEEFLKDMID---EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTAS 509

Query: 502 GLIPNQTTY 510
           G +P+   +
Sbjct: 510 GFVPDVAVF 518



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 46/419 (10%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            LH + K G++ SV  +F  +S                                      
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMS-------------------------------------G 192

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            G++  V+    L+ +L + GK +    V   M  R +E N+ ++N ++N +CK G + +
Sbjct: 193 RGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVRE 252

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV--ENGILPNEVTF 262
           A D+ ++M   GV P VVTYN LI G      + +M +A A+ ++M+  E  + P+ +TF
Sbjct: 253 ALDLRKNMSEKGVQPDVVTYNTLITGL---SSVLEMDEAMALLEEMMQGETRVRPDLMTF 309

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N++I G CK   +  A++V   M  +G    +V +N LI GL    K+ +A+ L DEM +
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           SGL+P+  T + LINGFCK + VE+A     ++  QG+ P  + Y  L+ A C +G M  
Sbjct: 370 SGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQ 429

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  + N M DR    D + Y+ +I G  + G  +     + ++++ G+    VTY+I + 
Sbjct: 430 ARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              K G    A  +L +   M      P++  ++ LI+G+  KG  E    L  E+  K
Sbjct: 489 MFAKSGDLAAAERVLKQ---MTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 185/403 (45%), Gaps = 81/403 (20%)

Query: 199 AGKLNKASDIM---EDMKSLGVSPKV---VTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           A +LN+   ++   E    L   P V   V+YN ++   C++G +        V      
Sbjct: 28  AARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPR 87

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
               PN +++ TL+   C D   + A+ +   M   G+   VVTY +LI GLC    +D 
Sbjct: 88  LASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDT 147

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKL---------------------------- 344
           AV L +EM  SG++PNVV  + L++G+CK                               
Sbjct: 148 AVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID 207

Query: 345 -------VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
                  V+KA  + D ++E+GL P+V+TYN LI++ CKEG + +A  +R +M ++GV P
Sbjct: 208 SLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVN------------------------------ 427
           DV TYN LI GLS    ++    ++ E++                               
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQ 327

Query: 428 -------NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
                  NG R  LV +N+L+G L +  K KKA+ L+DE   M      P+  TY++LI 
Sbjct: 328 VRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDE---MASSGLQPDSFTYSILIN 384

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           GFC+  ++E A   L+E+  +G+ P    Y  + + M ++G +
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 29/248 (11%)

Query: 295 VTYNSLINGLCVDGKLDEAVAL-----RDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           V+YN+++  LC  G LD A+ L      +  +AS  +PN ++   L+   C  +   +A 
Sbjct: 57  VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS--RPNAISYTTLMRALCADRRAAQAV 114

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   + + G+ P V+TY TLI   C    ++ A  + N M + G+ P+V  Y+CL+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G  E V  +  E+   G+   +V Y  L+ +LC+ GK KKA  ++D M +   E   
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE--- 231

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           PN+VTYNVLI   C++G + +A  L                   R+ M EKG  PD+  +
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDL-------------------RKNMSEKGVQPDVVTY 272

Query: 530 MYNISGTS 537
              I+G S
Sbjct: 273 NTLITGLS 280



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 6/275 (2%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           G+  ++  +++ N ++  L K G       V   M       NL +FN ++ GL +  K+
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKV 357

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            KA ++M++M S G+ P   TY+ILI+G+CK   + ++ +A++   +M   G+ P  V +
Sbjct: 358 KKAMELMDEMASSGLQPDSFTYSILINGFCK---MRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             L+   C    +  A  +F EM           Y+++I+G    G+   A     +M+ 
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMID 473

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL P+ VT +  IN F K   +  A  +   ++  G  P V  +++LI  Y  +G  E 
Sbjct: 474 EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEK 533

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
              +   M  + V  D    + ++  L    ++EG
Sbjct: 534 ILELTREMTAKDVALDPKIISTIVTSLG--ASIEG 566


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E++N G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M   G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLNVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M  SG++P+V T + LING CK+  ++ A  LFD++ ++GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+    +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANX 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E++ KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLXPDKITY 314



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTQQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 212/439 (48%), Gaps = 52/439 (11%)

Query: 115 NSIIIDMLMLAYVKNMK---PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           N    + L+  YVK  +    HL F++  +      +   +S N L+    K G  +   
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNV---FEPDEVSYNTLMNGFFKAGDVKKAL 157

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ EMK   I + L S N VL GLC  GK++ A ++ +DM  +  SP +++Y I+IDG 
Sbjct: 158 ALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGL 215

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           CK     K+ KA  +FK MV+  I P+ VT+  LIDG  K   +  A  +FEE  + G  
Sbjct: 216 CKSR---KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCH 272

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARV 350
             VVTYN++I+GLC  G+++ A+ L D+M+    LKP++ T +ALING       EKA  
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYE 332

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEG-------------------------------- 378
           L++++ + G SP V+TYNTL+D  CK G                                
Sbjct: 333 LYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRF 392

Query: 379 ----RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
               R+ DA  +   M  R +LPD  T+  +I  L +E  ++    +  E +    +   
Sbjct: 393 CKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDS 451

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V +N ++   CK  +   A  L D M         P + TY  L+ GFC+ G+  DA  +
Sbjct: 452 VLFNTMLAGYCKITRIDDAKKLHDRMLD---SGCAPTLATYTALVTGFCRTGRYSDALIM 508

Query: 495 LNELLEKGLIPNQTTYQIV 513
            +E++E G  P +   ++V
Sbjct: 509 YHEMIEMGFPPERHLAELV 527



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 200/394 (50%), Gaps = 44/394 (11%)

Query: 132 PHLGFEAFKRAGDYG-LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           P+  +E F+ AG       +  +CN LL   VK  + ED    ++   +   E       
Sbjct: 82  PNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFE------- 134

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
                                       P  V+YN L++G+ K G + K   A A+F +M
Sbjct: 135 ----------------------------PDEVSYNTLMNGFFKAGDVKK---ALALFGEM 163

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
            ++GI     + N ++ G C    IS A +VF++M S   +  +++Y  +I+GLC   K+
Sbjct: 164 KDSGIAVLR-SHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKV 221

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D+A+ L  +M+   + P+VVT  ALI+G  K++ V++A  LF++   +G  P+V+TYNT+
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           ID  CK GR+E+A  + + M+    L PD+ TY+ LI GL+     E    +  E+++ G
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
               +VTYN L+  LCK G   KA+ +  +M         PN++TY VLI  FC+  +L 
Sbjct: 342 CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCD--PNVITYTVLIDRFCKVDRLG 399

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           DA  L  E+  + L+P+  T+  V +++ ++  I
Sbjct: 400 DAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRI 433



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 196/442 (44%), Gaps = 58/442 (13%)

Query: 42  DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL--HM----------- 88
           DP      F W+ K+ + +H+      LL   V A++      F   HM           
Sbjct: 81  DPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSY 140

Query: 89  ------FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
                 F K G       +F  +     ++ R+  I+   +       K  + +E FK  
Sbjct: 141 NTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIV---LRGLCSGGKISMAWEVFKDM 197

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
                  +++S   ++  L K  K +    ++K+M  + I  ++ ++  +++GL K  ++
Sbjct: 198 SGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRV 256

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------- 237
            +A D+ E+ ++ G  P VVTYN +IDG CK G I                         
Sbjct: 257 KEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSA 316

Query: 238 --------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
                    +  KA  ++++M++ G  P+ VT+NTL+DG CK      AM++F +MG   
Sbjct: 317 LINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376

Query: 290 IA-AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           +    V+TY  LI+  C   +L +AV L  EM    L P+ VT   +I   CK+  +++A
Sbjct: 377 VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA 436

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LF+ I +    P  + +NT++  YCK  R++DA  + + MLD G  P ++TY  L+ G
Sbjct: 437 HELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495

Query: 409 LSREGNVEGVRNIMNELVNNGM 430
             R G       + +E++  G 
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGF 517


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  N      ++ + VK  +  L  + F +    G+          +RA  +    +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M+   ++ +   +N ++ GLCK  ++ +A ++   M ++GV+   VTY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+C+   + ++  A  +  DM+  G +P+E   + +ID   K E +  A  +  ++G  
Sbjct: 276 YGFCR---MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V  YN+LI+ LC + + D+A  L  EM   GL+PN VT   LI+  CK+ ++E A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LFD + ++G+  +V  YN+LI+ YCK+G ++ A  + + M+  G+ P  ++Y+ LIAG
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R G++     +  E+   G+     T+  L+   CKD K  +A  L D   KM     
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD---KMIDSNV 509

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            PN VT+NV+I+G+C  G +  A  L ++++E GL P+  TY+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 208/400 (52%), Gaps = 9/400 (2%)

Query: 131 KPHLGFEAFKRA---GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  L  EAF  A   GD G+  +V + N L+  L K  +F+D + ++KEM  R +E N  
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  +++ LCK G +  A  + + M+  G+   V  YN LI+GYCK+G + +   A  + 
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---ARGLL 431

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV+ G+ P   +++ LI G C++ ++S+AM++  EM   GIA    T+ +LING C D
Sbjct: 432 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKD 491

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K+DEA  L D+M+ S + PN VT N +I G+C    + KA  L+D + E GL P   TY
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +LI   C    +  A      + +   + +  +   L+ GL REG      ++ +E+  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAV 611

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  LV++ I+V A  K    +K+  L  EM   +++   P+ + Y  +I    ++  
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEEN 668

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +  A    ++++  G  PN  T+ ++   + + G++   E
Sbjct: 669 MIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAE 708



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 238/525 (45%), Gaps = 102/525 (19%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G    V  +F A +   D LC+N    D   L              FK     GL+ +
Sbjct: 328 KLGDLGMVPNVF-AYNALIDKLCKNERFDDADRL--------------FKEMAGRGLEPN 372

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            ++   L+ AL K G  ED   ++ +M+ + I++ +  +N ++NG CK G L++A  ++ 
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G++P   +Y+ LI G C+ G +     A  + ++M E GI  N  TF  LI+GFC
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSS---AMELHREMAERGIAWNNYTFTALINGFC 489

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           KD+ +  A ++F++M    +    VT+N +I G C+ G + +A  L D+M+  GLKP+  
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 331 TSNALINGFCKKKLVEKARV-----------------------------------LFDDI 355
           T  +LI+G C    V KA                                     L+D++
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           + +G+   ++++  ++ A  K+   E +  +   M ++GV PD   Y C+I  LS+E N+
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------- 462
               N  +++V +G     VT+ +L+  LCK G    A  L  EM               
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 463 ---------MEKEK---------KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                    MEK K            +IV++N+LIKG C+ GK+++A  L+ ++ E G  
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFS 789

Query: 505 PNQTTYQ-IVRE---------------EMMEKGFIPDIEGHMYNI 533
           P+  +Y  I+ E               EM+ KG  PD+    YNI
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA--YNI 832



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 22/433 (5%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +  +++  ++LM    KNM+     E      + G+ +  ++   L+    +  + E
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M R     +  + +F+++ L K   + +A  +   +  LG+ P V  YN LI
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK     +   AD +FK+M   G+ PNEVT+  LI   CK   I  A+ +F++M   
Sbjct: 346 DKLCKNE---RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   V  YNSLING C  G LD A  L   M+  GL P   + + LI G C+   +  A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L  +++E+G++ +  T+  LI+ +CK+ +M++A  + + M+D  V+P+  T+N +I G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
               GN+     + +++V  G++    TY  L+  LC      KA   + +   +E    
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD---LENSYA 579

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
             N  +   L+ G  ++G+  +   L +E+  +G+  +  ++ I+               
Sbjct: 580 VLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 515 --EEMMEKGFIPD 525
              EM E+G  PD
Sbjct: 640 LFREMKEQGVKPD 652



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 185/409 (45%), Gaps = 36/409 (8%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E  +   + G+  +  +   L+    K+ K ++   ++ +M    +  N  +FN ++ 
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI----------------- 237
           G C  G + KA  + + M  +G+ P   TY  LI G C   G+                 
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 238 ---------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                          G+  +   ++ +M   G+  + V+F  ++    K  +   +  +F
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM   G+    + Y  +I+ L  +  + +A+   D+M+  G  PN VT   LIN  CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS 701

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             +  A +L  ++    + P+  TYN  +D +  EG ME A  + ++ML +G L  + ++
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 760

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N LI GL + G ++   ++M ++  +G     ++Y+ ++  LCK G   KA  L +EM  
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM-- 818

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + K  K P++V YN+ I+     G+ + A G+   ++  G+ PN  TY+
Sbjct: 819 LYKGLK-PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 4/293 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S   LL  L +EG+F +  +++ EM  R ++L+L SF  ++    K     K+  +  +
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  GV P  + Y  +ID   K+     M +A   +  MV +G  PN VT   LI+  CK
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEE---NMIQALNCWDQMVIDGYSPNTVTHTVLINNLCK 700

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + +EM +  +     TYN  ++    +G +++A  L   M+   L  ++V+
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVS 759

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CK   +++A  L   I+E G SP  I+Y+T+I   CK G +  AF + N ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +G+ PDV  YN  I   +  G  +    I   ++ +G++    TY  L+  +
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 189/395 (47%), Gaps = 13/395 (3%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY--VKNMKPHLGFEAFKRAGDYG 146
           F K+ K    + +F  +     ++  N +  ++++  Y  V N++    F+ + +  + G
Sbjct: 488 FCKDKKMDEAARLFDKM--IDSNVIPNEVTFNVMIEGYCLVGNIRK--AFQLYDQMVEMG 543

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           LK    +   L+  L              +++     LN  S   +L GL + G+  +  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + ++M   GV   +V++ I++    K+       K+  +F++M E G+ P+++ +  +I
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQH---DKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D   K+EN+  A+  +++M   G +   VT+  LIN LC  G L  A  L  EM+A  + 
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN  T N  ++ F  +  +EKA+ L   +  QG   S++++N LI   CK G++++A  +
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              + + G  PD  +Y+ +I  L + G++     + NE++  G++  +V YNI +     
Sbjct: 780 MRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
            G+S KA+ +   M +   +  W    TY  L+ G
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWD---TYRALLSG 871



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           + +GI  N+ T + ++    K    + A  +F++M   G+      Y + I   C    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  L   M + G+K + V  N L+ G CK   V++A  + + +   G++   +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 371 IDAYC-----------------------------------KEGRMEDAFAMRNSMLDRGV 395
           +  +C                                   K+  +E+AF++   + D G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+V  YN LI  L +    +    +  E+   G+    VTY IL+ ALCK G  + A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L D   KM  +     +  YN LI G+C++G L+ A GLL+ ++++GL P   +Y
Sbjct: 395 LFD---KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 3/239 (1%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S GI     T + ++  L    +   A  L D+M+ SG+  +     A I  +C+ + ++
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR L   +  +G+  S + YN L+   CK  R+++A  ++N M++ GV  D  TY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  R   +E    I ++++  G        + ++  L K    ++A SL     K+   
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL---ACKLGDL 332

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              PN+  YN LI   C+  + +DA+ L  E+  +GL PN+ TY I+   + ++G I D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 8/373 (2%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           ++GD  L   V +C  L+    + G   +   V+  M R  +  N  ++  ++NG    G
Sbjct: 30  KSGDAAL--DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRG 87

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
                  +  +M+  GV P + TYN LI  +C+ G   +   A  +F +M   G++ N V
Sbjct: 88  HREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTG---EFKSARLLFDEMPVKGVVHNVV 144

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++N LI G C+   +  A+++FE M   GI   +VT+N LI+G    GK+  A+   ++M
Sbjct: 145 SYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQM 204

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            A+GL P+VVT N LI GFC+ + + +A   F D+ E+GL+P+ +TY  LI A+ KE  M
Sbjct: 205 KAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEM 264

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + AF M + M   G+  DV +Y  L+  L  EG +   R +   +   G++   V Y+++
Sbjct: 265 DRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMM 324

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    ++G S KA+ L+ E   M K    PN+ +Y + I+  C +GK ++A  L++++  
Sbjct: 325 IYGYGREGSSYKALRLIME---MRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEH 381

Query: 501 KGLIPNQTTYQIV 513
            GL  ++T  +I+
Sbjct: 382 AGLQTSETICRIL 394



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 8/403 (1%)

Query: 41  ADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST 100
           A    ++R  C +  E+R++ ++L  G    S   A       + +H+  ++G       
Sbjct: 3   ASTAAVVRRLCVAA-EVRSALAVLARG--TKSGDAALDVAACTALVHVCCQSGDVAEARR 59

Query: 101 IFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRA 160
           +F  +      +  N +    L+  Y       +GF  F      G++ ++ + N L+  
Sbjct: 60  VFDVMPRLG--VAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGE 117

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
             + G+F+    ++ EM  + +  N+ S+N ++ GLC+  KL  A  + E M+  G+ P 
Sbjct: 118 WCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPS 177

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           +VT+N+LIDGY   G  GKM  A   F  M   G+ P+ VT+N LI GFC+  +I+ A++
Sbjct: 178 IVTFNLLIDGY---GKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVR 234

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F +M   G+A   VTY  LI     + ++D A  +  EM  +GL+ +V +   L++  C
Sbjct: 235 AFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALC 294

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
            +  +  AR LF  +  +G+ P+ + Y+ +I  Y +EG    A  +   M   G++P+V+
Sbjct: 295 MEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVA 354

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           +Y   I  L  EG  +    +++++ + G++       IL+ A
Sbjct: 355 SYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 210/441 (47%), Gaps = 80/441 (18%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L++ L KEG+  D   +  EM  R +  ++ ++N +++G CK+G++  A  I   M+  G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P   TYN LI G C     GK+ +A+ +    +  G  P  +TF  LI+G+CK E I 
Sbjct: 350 CNPDDWTYNSLIYGLCG----GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 277 AAMKV-----------------------------------FEEMGSHGIAAGVVTYNSLI 301
            A++V                                     EM ++G+A  VVTY S+I
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSII 465

Query: 302 NGLC-----------------------------------VDGKLDEAVALRDEMMASGLK 326
           +G C                                    D KL +A+AL  +M   G+ 
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P V+T   LI G CKK   + A  LF+ + + GL+P    YN L DA CK GR E+A++ 
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              ++ +GV+    TY  L+ G S+ GN +    ++ ++VN G +A L TY++L+ ALCK
Sbjct: 586 ---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             K  +A+S+LD+M     +    NIV Y ++I    ++GK + A  L NE++  G  P+
Sbjct: 643 QKKLNEALSILDQMTVSGVK---CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPS 699

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
            TTY +      + G I + E
Sbjct: 700 ATTYTVFISSYCKIGRIEEAE 720



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 196/378 (51%), Gaps = 9/378 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++   L+    K  + +D   V   M     +L+L ++  ++N L K  +L +A
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + + +M + G++P VVTY  +IDGYCK G +G    A  VFK M   G  PN  T+ +L
Sbjct: 443 KETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG---AALEVFKLMEHEGCHPNAWTYGSL 499

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  +D+ +  AM +  +M   GI  GV+TY +LI G C   + D A  L + M  +GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+    N L +  CK    E+A   +  +  +G+  + +TY +L+D + K G  + A  
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M++ G   D+ TY+ L+  L ++  +    +I++++  +G++  +V Y I++  + 
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK   A SL +EM     +   P+  TY V I  +C+ G++E+A  L+ E+   G+ P
Sbjct: 677 KEGKHDHAKSLFNEMISSGHK---PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTP 733

Query: 506 NQTTYQIVREEMMEKGFI 523
           +  TY I        G+I
Sbjct: 734 DVVTYNIFINGCGHMGYI 751



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 217/463 (46%), Gaps = 49/463 (10%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           ++ L  N +    ++  Y K        E FK     G   +  +   L+  L+++ K  
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M+   I   + ++  ++ G CK  + + A  + E M+  G++P    YN+L 
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK G      +A+  +  +V  G++  +VT+ +L+DGF K  N   A  + E+M + 
Sbjct: 571 DALCKSG------RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G  A + TY+ L+  LC   KL+EA+++ D+M  SG+K N+V    +I+   K+   + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           + LF+++   G  PS  TY   I +YCK GR+E+A  +   M   GV PDV TYN  I G
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING 744

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF------- 461
               G ++   + +  +V+        TY +L+    K       +SL++  +       
Sbjct: 745 CGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK-------MSLINAHYVDTSGMW 797

Query: 462 -------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
                        +M K    P +VTY+ +I GFC+  +LE+A  LL+ +L K + PN+ 
Sbjct: 798 NWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEE 857

Query: 509 TYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
            Y ++ +                +M+E GF P +E + Y I G
Sbjct: 858 IYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVG 900



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 204/413 (49%), Gaps = 7/413 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
            + L  +++  + +++AY K     +    F    + G++    +CN LL    +     
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
              ++   M       N  S+  ++ GLC+A  + +A  ++  M   G S  + TY +LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLI 291

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G CK+   G+++ A  +  +M   G++P+  T+N +IDG+CK   +  A+ +   M  +
Sbjct: 292 KGLCKE---GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G      TYNSLI GLC  GKLDEA  L +  +A G  P V+T   LING+CK + ++ A
Sbjct: 349 GCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +  ++        +  Y  LI+   K+ R+++A    N M   G+ P+V TY  +I G
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDG 467

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             + G V     +   + + G      TY  L+  L +D K  KA++L+    KM+++  
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT---KMQEDGI 524

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P ++TY  LI+G C+K + ++A  L   + + GL P++  Y ++ + + + G
Sbjct: 525 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 205/448 (45%), Gaps = 56/448 (12%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +A +R G   L  S    N  LR+L++    E +  +Y  + +  +  +  ++N ++ 
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK--------------- 239
             CK G L  A      ++  G+     T N L+ GYC+   + K               
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247

Query: 240 -----------------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                            + +A  +   MV +G   N  T+  LI G CK+  I  A  + 
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   G+   V TYN++I+G C  G++ +A+ ++  M  +G  P+  T N+LI G C  
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG 367

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           KL E   +L   I+ +G +P+VIT+  LI+ YCK  R++DA  ++++M+      D+  Y
Sbjct: 368 KLDEAEELLNGAIA-RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             LI  L ++  ++  +  +NE+  NG+   +VTY  ++   CK G    A+    E+FK
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAAL----EVFK 482

Query: 463 -MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE------ 515
            ME E   PN  TY  LI G  Q  KL  A  L+ ++ E G+ P   TY  + +      
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 516 ---------EMMEK-GFIPDIEGHMYNI 533
                    EMME+ G  PD +   YN+
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQA--YNV 568



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 177/390 (45%), Gaps = 54/390 (13%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGK---LNKASDIMEDMKSLG-----VSPKVVTYNILI 228
           + RRR   N D    VL+ +  +G    + +A D ++ ++ +G     +SPK   YN+ +
Sbjct: 96  LARRRAPANYD--KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKC--YNLAL 151

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
               +      M K   ++  +V+ G+LP+ VT+NT+I  +CK  +++ A + F  +   
Sbjct: 152 RSLLRFDMTEYMGK---LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRES 208

Query: 289 GIAAGVVT-----------------------------------YNSLINGLCVDGKLDEA 313
           G+     T                                   Y  LI GLC    + EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L   M+  G   N+ T   LI G CK+  +  AR L D++  +G+ PSV TYN +ID 
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK GRM+DA  ++  M   G  PD  TYN LI GL   G ++    ++N  +  G    
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPT 387

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           ++T+  L+   CK  +   A+ +   M     +    ++  Y VLI    +K +L++A  
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKL---DLQAYGVLINVLIKKCRLKEAKE 444

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            LNE+   GL PN  TY  + +   + G +
Sbjct: 445 TLNEMFANGLAPNVVTYTSIIDGYCKVGMV 474



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 153/331 (46%), Gaps = 19/331 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G K+ + + + LL+AL K+ K  +   +  +M    ++ N+ ++  +++ + K GK + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M S G  P   TY + I  YCK   IG++ +A+ +  +M  +G+ P+ VT+N  
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCK---IGRIEEAEHLIGEMERDGVTPDVVTYNIF 741

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTY---------NSLINGLCVDG-------K 309
           I+G      I  A    + M          TY          SLIN   VD        +
Sbjct: 742 INGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIE 801

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+    L + MM  GL P VVT +++I GFCK   +E+A VL D +  + +SP+   Y  
Sbjct: 802 LNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 861

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C       A +    M++ G  P + +Y+ LI GL  EG+ +  +++  +L+   
Sbjct: 862 LIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMD 921

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
                V + IL   L K G       LL  M
Sbjct: 922 YNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 161/340 (47%), Gaps = 19/340 (5%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+ A  K  K +       +    G+K ++++   ++  ++KEGK +  + ++ EM   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
             + +  ++   ++  CK G++ +A  ++ +M+  GV+P VVTYNI I+G C  G +G +
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING-C--GHMGYI 751

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA----------------AMKVFEE 284
            +A +  K MV+    PN  T+  L+  F K   I+A                  ++ E 
Sbjct: 752 DRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLER 811

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  HG+   VVTY+S+I G C   +L+EA  L D M+   + PN      LI   C  KL
Sbjct: 812 MMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKL 871

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
             KA     D+ E G  P + +Y+ LI   C EG  + A ++   +L      +   +  
Sbjct: 872 FGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKI 931

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           L  GL + G+V+    ++  + N   R    +Y++L  ++
Sbjct: 932 LNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 197/350 (56%), Gaps = 7/350 (2%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G  +  E VYKEM   ++  +   +N +LNG  +AG++    ++ E M     S  VV
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRED-SQNVV 60

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           ++NI++ G     G G + KA ++++ M ++G + +  T+  L+DGFCK+  I+ +++V 
Sbjct: 61  SFNIMMRGLF---GNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL 117

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
                 G       Y+++INGLC + KLDEAV++ + M+ +G  PN    N LINGF   
Sbjct: 118 GIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGV 177

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              + A  +F ++     SP+V+TYNTLI+  CK  R  +A+ +   ML++G  P V TY
Sbjct: 178 SKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL +   VE    + N++++NG++  +   NIL+  LC  GK++ A+ L    F 
Sbjct: 238 SLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLY---FD 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           M +    PN+VT+N L++GF + G + +A G+   +L  GL P+  +Y I
Sbjct: 295 MNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNI 344



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 5/306 (1%)

Query: 92  NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
           NG      +I+  ++        +S    +L+  + KN   +        A + G     
Sbjct: 72  NGDVDKAISIWELMT--QSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDA 129

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            + + ++  L KE K ++   V   M +     N   +N ++NG     K + A  +  +
Sbjct: 130 FAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFRE 189

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M S   SP VVTYN LI+G CK     + Y    + K+M+E G  P  +T++ L+ G C+
Sbjct: 190 MGSTNCSPTVVTYNTLINGLCKGERFAEAYD---LVKEMLEKGWKPCVITYSLLMKGLCQ 246

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A++++ ++ S+G+   V   N LI+GLC  GK   A+ L  +M      PN+VT
Sbjct: 247 GHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVT 306

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L+ GF K   +  A  ++  I   GL P +++YN  +   C   R+  A       L
Sbjct: 307 HNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDAL 366

Query: 392 DRGVLP 397
            + + P
Sbjct: 367 AKKIAP 372



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 4/250 (1%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  +I  A +V++EM    ++   V YN+++NG    G++ + + L  E+M      NV
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+ N ++ G      V+KA  +++ +++ G      TY  L+D +CK G +  +  +   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
             ++G + D   Y+ +I GL +E  ++   +++N ++ NG       YN L+       K
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
              A+ +  EM         P +VTYN LI G C+  +  +A  L+ E+LEKG  P   T
Sbjct: 180 FDDAIRVFREMGSTNCS---PTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236

Query: 510 YQIVREEMME 519
           Y ++ + + +
Sbjct: 237 YSLLMKGLCQ 246



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 3/209 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+   V   KF+D   V++EM        + ++N ++NGLCK  +  +A D++++M  
Sbjct: 168 NTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLE 227

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P V+TY++L+ G C+     K+  A  ++  ++ NG+ P+    N LI G C    
Sbjct: 228 KGWKPCVITYSLLMKGLCQGH---KVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A+ ++ +M     A  +VT+N+L+ G   DG +  A+ +   ++ +GL+P++V+ N 
Sbjct: 285 TQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNI 344

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPS 363
            + G C    +  A +   D   + ++PS
Sbjct: 345 TLKGLCSCSRISFAILFLQDALAKKIAPS 373



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/111 (20%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G+++G   +  E+  + +    V YN ++    + G+ K  + L + M + + +    N+
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQ----NV 59

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           V++N++++G    G ++ A  +   + + G + + TTY I+ +   + G+I
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYI 110


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 197/359 (54%), Gaps = 6/359 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL +  ++   + V  + KEM+ R +E  + ++  +++GL +AG ++K   + ++MK 
Sbjct: 187 NSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKR 246

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             V+  V  Y+ +I+ YC+ G +    +A  VF + V +G+ PNE T+  LI+GFCK   
Sbjct: 247 KNVAGDVYFYSAVINAYCRGGNV---RRASEVFDECVGHGVEPNERTYGALINGFCKIGQ 303

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I AA  +  +M   G+    + +N++I+G C  G +++A+ ++  M   G++ ++ T N 
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L  G C+   +E A+ L   ++E+G++P+ ++Y TLI  + KEG M +A  +   M  +G
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P V TYN +I G  + G++        E+   G+   + TY  LV   C +GK   A+
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            L +E   M+     PN+V Y  L+ G  ++G+ E+A  L +++L  GL P+ T Y ++
Sbjct: 484 RLFEE---MKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 184/334 (55%), Gaps = 6/334 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +V +   L+  L + G    VE VY EMKR+ +  ++  ++ V+N  C+ G + +A
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRA 272

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           S++ ++    GV P   TY  LI+G+CK   IG++  A+ +  DM   G+  N++ FNT+
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCK---IGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+   +  A+++   M   GI   + TYN+L  GLC   ++++A  L   M   G+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN V+   LI+   K+  + +AR LF D+  +G  PSV+TYN +ID Y K G + +A  
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
            +  M  +G++PD+ TY  L+ G    G V+    +  E+ + G +  +V Y  LV  L 
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           K+G+S++A  L D+M         P+   Y+VL+
Sbjct: 510 KEGRSEEAFQLYDDMLAA---GLTPDDTLYSVLV 540



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 199/372 (53%), Gaps = 10/372 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS + ++    K G  +D   +  E+ R  + LN   +N +L+   +    +  + ++++
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M++ GV P V TY IL+DG  + G I K+   +AV+ +M    +  +   ++ +I+ +C+
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKV---EAVYDEMKRKNVAGDVYFYSAVINAYCR 265

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A +VF+E   HG+     TY +LING C  G+++ A  L  +M   G+  N + 
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+G+C+  +VEKA  +   + + G+   + TYNTL    C+  RMEDA  + + M 
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++GV P+  +Y  LI+  ++EG++   R +  ++   G R  +VTYN+++    K+G  +
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445

Query: 452 KAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +A     E FK E EKK   P+I TY  L+ G C  GK++ A  L  E+  +G  PN   
Sbjct: 446 EA-----ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVA 500

Query: 510 YQIVREEMMEKG 521
           Y  +   + ++G
Sbjct: 501 YTALVSGLAKEG 512



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 147/285 (51%), Gaps = 3/285 (1%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           AY +        E F     +G++ +  +   L+    K G+ E  E +  +M+ R +  
Sbjct: 262 AYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGH 321

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   FN +++G C+ G + KA +I   M+ +G+   + TYN L  G C+   + +M  A 
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCR---VNRMEDAK 378

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            +   M E G+ PN V++ TLI    K+ ++  A ++F +M   G    VVTYN +I+G 
Sbjct: 379 KLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 438

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
             +G + EA   + EM   GL P++ T   L++G C    V+ A  LF+++  +G  P+V
Sbjct: 439 IKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNV 498

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + Y  L+    KEGR E+AF + + ML  G+ PD + Y+ L+  L
Sbjct: 499 VAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 27/347 (7%)

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVT---YNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           AG+L  A+D++   K++   P  VT    ++++DG+CK G +     A  +  ++  +G+
Sbjct: 125 AGQLPAAADLLG--KAIASCPASVTPLSASVVVDGFCKSGSVDD---AHGLLDELPRHGV 179

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             N   +N+L+D + +  N  A   + +EM + G+   V TY  L++GL   G + +  A
Sbjct: 180 GLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEA 239

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           + DEM    +  +V   +A+IN +C+   V +A  +FD+    G+ P+  TY  LI+ +C
Sbjct: 240 VYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFC 299

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K G++E A  +   M  RGV  +   +N +I G  R G VE    I   +   G+   + 
Sbjct: 300 KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIY 359

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           TYN L   LC+  + + A  LL     M ++   PN V+Y  LI    ++G + +A  L 
Sbjct: 360 TYNTLACGLCRVNRMEDAKKLL---HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLF 416

Query: 496 NELLEKGLIPNQTTYQI----------VRE------EMMEKGFIPDI 526
            ++  KG  P+  TY +          +RE      EM +KG +PDI
Sbjct: 417 RDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDI 463



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N ++    + G  E    +   M++  IEL++ ++N +  GLC+  ++  A  ++  M  
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            GV+P  V+Y  LI  + K+G    M +A  +F+DM   G  P+ VT+N +IDG+ K+ +
Sbjct: 387 KGVAPNYVSYTTLISIHAKEG---DMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGS 443

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I  A +  +EM   G+   + TY  L++G CV+GK+D A+ L +EM   G KPNVV   A
Sbjct: 444 IREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTA 503

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           L++G  K+   E+A  L+DD+   GL+P    Y+ L+ +   + R
Sbjct: 504 LVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           ++ +++V   CK G    A  LLDE+    +     N   YN L+  + ++   +   GL
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDEL---PRHGVGLNACCYNSLLDSYTRQRNDDAVAGL 205

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           L E+  +G+ P   TY I+ + +   G I  +E
Sbjct: 206 LKEMENRGVEPTVGTYTILVDGLSRAGDISKVE 238


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 203/376 (53%), Gaps = 13/376 (3%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F R  ++G   SV   N +L  L+ E + + +  VY++MKR   E N+ ++N +L  L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK  K++ A  ++ +M + G  P  V+Y  +I   C+ G + +  +    F+ +V     
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS---- 247

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
                +N LI+G CK+ +   A ++  EM   GI+  V++Y++LIN LC  G+++ A + 
Sbjct: 248 ----VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYC 375
             +M+  G  PN+ T ++L+ G   +     A  L++  I   GL P+V+ YNTL+  +C
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G +  A ++ + M + G  P++ TY  LI G ++ G+++G   I N+++ +G    +V
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  +V ALC+  K K+A SL++    M KE   P++ T+N  IKG C  G+L+ A  + 
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIE---IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480

Query: 496 NELLEKGLI-PNQTTY 510
            ++ ++    PN  TY
Sbjct: 481 RQMEQQHRCPPNIVTY 496



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 194/379 (51%), Gaps = 13/379 (3%)

Query: 134 LGFEAFKRAGDYGL-KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           L    FK   +  L K + L+   ++R L  +G+ + V+Y+ ++MK +    + D F  V
Sbjct: 58  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++   + G   +A ++   +K  G  P V  YN ++D    +  I  +Y    V++DM  
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY---MVYRDMKR 174

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G  PN  T+N L+   CK+  +  A K+  EM + G     V+Y ++I+ +C  G + E
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
              L     A   +P V   NALING CK+   + A  L  ++ E+G+SP+VI+Y+TLI+
Sbjct: 235 GREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMR 431
             C  G++E AF+    ML RG  P++ T + L+ G    G      ++ N+++   G++
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +V YN LV   C  G   KAVS+      ME+    PNI TY  LI GF ++G L+ A
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSH---MEEIGCSPNIRTYGSLINGFAKRGSLDGA 406

Query: 492 NGLLNELLEKGLIPNQTTY 510
             + N++L  G  PN   Y
Sbjct: 407 VYIWNKMLTSGCCPNVVVY 425



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 193/381 (50%), Gaps = 6/381 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            FE  +   + G+  +V+S + L+  L   G+ E       +M +R    N+ + + ++ 
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324

Query: 195 GLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           G    G    A D+   M +  G+ P VV YN L+ G+C  G I    KA +VF  M E 
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI---VKAVSVFSHMEEI 381

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN  T+ +LI+GF K  ++  A+ ++ +M + G    VV Y +++  LC   K  EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLID 372
            +L + M      P+V T NA I G C    ++ A  +F  + +Q    P+++TYN L+D
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              K  R+E+A+ +   +  RGV    STYN L+ G    G       ++ +++ +G   
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             +T N+++ A CK GK+++A  +LD +    + K  P++++Y  +I G C+    ED  
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620

Query: 493 GLLNELLEKGLIPNQTTYQIV 513
            LL  ++  G++P+  T+ ++
Sbjct: 621 ILLERMISAGIVPSIATWSVL 641



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 6/272 (2%)

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F    + G   ++ +   L+    K G  +   Y++ +M       N+  +  ++  LC
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGIL 256
           +  K  +A  ++E M     +P V T+N  I G C  G   ++  A+ VF+ M  ++   
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG---RLDWAEKVFRQMEQQHRCP 490

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN VT+N L+DG  K   I  A  +  E+   G+     TYN+L++G C  G    A+ L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS--EQGLSPSVITYNTLIDAY 374
             +MM  G  P+ +T N +I  +CK+   E+A  + D +S   +   P VI+Y  +I   
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           C+    ED   +   M+  G++P ++T++ LI
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLI 642



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 8/229 (3%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +T+  +I  L +DG++D    L  +M   G   +     ++I+ + +  L E+A  +F  
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I E G  PSV  YN ++D    E R++  + +   M   G  P+V TYN L+  L +   
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+G + ++ E+ N G     V+Y  ++ ++C+ G  K+   L         E+  P +  
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL--------AERFEPVVSV 248

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           YN LI G C++   + A  L+ E++EKG+ PN  +Y  +   +   G I
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 10/247 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V+    ++ AL +  KF++ E + + M +     ++ +FN  + GLC AG+L+ A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476

Query: 206 SDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             +   M+      P +VTYN L+DG  K   I + Y    + +++   G+  +  T+NT
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY---GLTREIFMRGVEWSSSTYNT 533

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C       A+++  +M   G +   +T N +I   C  GK + A  + D +++ G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCG 592

Query: 325 ---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG--R 379
               +P+V++   +I G C+    E   +L + +   G+ PS+ T++ LI+ +  +   R
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVR 652

Query: 380 MEDAFAM 386
             D F +
Sbjct: 653 AHDQFTI 659



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 11/266 (4%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P IR++   ++ F K G       I++ + T     C N ++   ++ A  ++ K     
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAE 442

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFVLNG 195
              +         SV + N  ++ L   G+ +  E V+++M+++ R   N+ ++N +L+G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L KA ++ +A  +  ++   GV     TYN L+ G C  G  G    A  +   M+ +G 
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI---ALQLVGKMMVDGK 559

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFE--EMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            P+E+T N +I  +CK      A ++ +    G       V++Y ++I GLC     ++ 
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619

Query: 314 VALRDEMMASGLKPNVVTSNALINGF 339
           V L + M+++G+ P++ T + LIN F
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 202/376 (53%), Gaps = 11/376 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G + F R  ++G + SV   N +L AL+ +  F+ +  +Y  MK   +E N+ ++N +L 
Sbjct: 128 GLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLK 187

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
            LC+ GK++ A  ++ +M + G  P  V+Y  +I   CK G + K  +    F+ +V   
Sbjct: 188 ALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVP-- 245

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
                  +N LI G CK+     A  +  EM   G+   V++Y+++I+ L   G ++ ++
Sbjct: 246 ------VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSL 299

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           A+   M   G +PNV T  +LI GF  +  V  A  L++ +  +G+SP+V+ YNTLI   
Sbjct: 300 AVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGL 359

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           C +G M++A ++ N M    + P+V+TY+ +I G ++ G++       N+++N G R  +
Sbjct: 360 CSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNV 419

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V Y  +V  LC+     +A  L+D M     +   P ++T+N  IKG C+ G++E A  +
Sbjct: 420 VVYTCMVDVLCQMSMFDQAFDLIDNMI---SDGCPPTVITFNNFIKGLCRAGRVEWAMNV 476

Query: 495 LNELLEKGLIPNQTTY 510
           L+++ +   +PN  TY
Sbjct: 477 LDQMEKYECLPNIRTY 492



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 201/396 (50%), Gaps = 11/396 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+      D G+  +V+S + ++  L   G  E    V+  M  R    N+ +F  ++ 
Sbjct: 263 AFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G    G++  A  +   M   GVSP VV YN LI G C  G    M +A +V+  M ++ 
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN---MDEAISVWNQMEKDS 379

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           I PN  T++T+I GF K  ++ +A + + +M + G    VV Y  +++ LC     D+A 
Sbjct: 380 IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAF 439

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L D M++ G  P V+T N  I G C+   VE A  + D + +    P++ TYN L+D  
Sbjct: 440 DLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGL 499

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            +     +A  +   + +R V  D  TYN ++ G S  G  + V  ++ +++ NG++   
Sbjct: 500 FRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDT 559

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           +T N  V A CK GK K A+ +LD +   EKE +  +I+T+ +++ G C     E+A   
Sbjct: 560 ITVNTTVNAYCKLGKVKTAIKVLDNI-SAEKEFR-ADIITHTIILWGICNWLGTEEAVVY 617

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           L+E+L++G+ PN  T+ +     + +GF   + GHM
Sbjct: 618 LHEMLKRGIFPNIATWNV-----LVRGFFSKL-GHM 647



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 12/376 (3%)

Query: 136 FEAFKRAGDYG-LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            E FK   + G  K + L+   ++  L +  + + V Y+ ++MK   +  + + F FV+ 
Sbjct: 58  LEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIK 117

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
              ++    +   +   ++  G  P V  YN+++D    +  + KM   +A++ +M   G
Sbjct: 118 CYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQ-NLFKM--INALYNNMKSEG 174

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PN  T+N L+   C++  +  A K+  EM + G     V+Y ++I+ +C  G +D+A 
Sbjct: 175 LEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR 234

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
            L     A   +P V   NALI+G CK+   ++A  L +++ ++G+ P+VI+Y+T+I   
Sbjct: 235 EL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL 289

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
              G +E + A+   M  RG  P+V T+  LI G    G V     + N ++  G+   +
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           V YN L+  LC DG   +A+S+ ++   MEK+   PN+ TY+ +I GF + G L  A   
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQ---MEKDSIRPNVTTYSTIIYGFAKSGDLVSACET 406

Query: 495 LNELLEKGLIPNQTTY 510
            N+++  G  PN   Y
Sbjct: 407 WNKMINCGCRPNVVVY 422



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 194/388 (50%), Gaps = 36/388 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFE-----------------DVEY--VYKEM-------KR 179
           GL+ +V + N LL+AL + GK +                 DV Y  V   M       K 
Sbjct: 174 GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA 233

Query: 180 RRIELNLDS----FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           R + +  +     +N +++G+CK  +  +A D+M +M   GV P V++Y+ +I       
Sbjct: 234 RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL---S 290

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +G +  + AVF  M   G  PN  TF +LI GF     +  A+ ++  M   G++  VV
Sbjct: 291 DMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVV 350

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            YN+LI+GLC DG +DEA+++ ++M    ++PNV T + +I GF K   +  A   ++ +
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              G  P+V+ Y  ++D  C+    + AF + ++M+  G  P V T+N  I GL R G V
Sbjct: 411 INCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRV 470

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           E   N+++++        + TYN L+  L +    ++A  L+ E   +E+ K   + VTY
Sbjct: 471 EWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE---LEERKVEFDCVTY 527

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGL 503
           N ++ GF   G  +    LL ++L  G+
Sbjct: 528 NTIMYGFSFNGMHQQVLQLLGKMLVNGI 555



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 59/356 (16%)

Query: 126 YVKNMKPHL--------GFEAFKRAGDY----------GLKSSVLSCNQLLRALVKEGKF 167
           +V+  +P++        GF    R GD           G+  +V++ N L+  L  +G  
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           ++   V+ +M++  I  N+ +++ ++ G  K+G L  A +    M + G  P VV Y  +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           +D  C+     + +    +  +M+ +G  P  +TFN  I G C+   +  AM V ++M  
Sbjct: 426 VDVLCQMSMFDQAFD---LIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482

Query: 288 HGIAAGVVTYNSLINGL------------------------CV-----------DGKLDE 312
           +     + TYN L++GL                        CV           +G   +
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQ 542

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS-EQGLSPSVITYNTLI 371
            + L  +M+ +G+K + +T N  +N +CK   V+ A  + D+IS E+     +IT+  ++
Sbjct: 543 VLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIIL 602

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG-LSREGNVEGVRNIMNELV 426
              C     E+A    + ML RG+ P+++T+N L+ G  S+ G++  +R I+++++
Sbjct: 603 WGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIR-ILDDII 657



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 36/322 (11%)

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           +TY  +ID   K G   +M     + + M    +  ++  F  +I  + +       +K+
Sbjct: 75  LTYETMID---KLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKM 131

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           F  +   G    V  YN +++ L          AL + M + GL+PNV T N L+   C+
Sbjct: 132 FYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQ 191

Query: 342 KKLVEKARVLFDDISEQG------------------------------LSPSVITYNTLI 371
              V+ A  L  ++S +G                                P V  YN LI
Sbjct: 192 NGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALI 251

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              CKE R ++AF + N M+DRGV P+V +Y+ +I+ LS  GNVE    +   +   G R
Sbjct: 252 HGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCR 311

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             + T+  L+      G+   AV L + M    +E   PN+V YN LI G C  G +++A
Sbjct: 312 PNVQTFTSLIKGFFVRGRVGDAVGLWNLMI---REGVSPNVVAYNTLIHGLCSDGNMDEA 368

Query: 492 NGLLNELLEKGLIPNQTTYQIV 513
             + N++ +  + PN TTY  +
Sbjct: 369 ISVWNQMEKDSIRPNVTTYSTI 390



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 9/244 (3%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGV-VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           ++ +I ++++ F+ + + G      +TY ++I+ L  + ++D    L  +M    +  + 
Sbjct: 50  QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQ 109

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                +I  + +  L E+   +F  I E G  PSV  YN ++DA   +   +   A+ N+
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNN 169

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   G+ P+V TYN L+  L + G V+G   ++ E+ N G     V+Y  ++ ++CK G 
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             KA  L     K E     P +  YN LI G C++ + ++A  L+NE++++G+ PN  +
Sbjct: 230 VDKAREL---AMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVIS 281

Query: 510 YQIV 513
           Y  V
Sbjct: 282 YSTV 285


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S++F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  + +    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRL---AQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ + L P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 158/279 (56%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ +  L P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        L+  FK  K     NI    V Y  LI G 
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGD-------LETAFKYRKRMIKENIRLDDVAYTALISGL 356

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  ++ LI AY + G + DA        +        T   ++  L +    + V     
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIK 480
           E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P++V++N L+ 
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRPSVVSFNTLMN 179

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           G+ + G L++   L N +   G+ P+  TY ++
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVL 212


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 248/514 (48%), Gaps = 42/514 (8%)

Query: 36  LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
           L    +D    L +F W   +L    S      ++H+L  ++ + +   FL   V+  K 
Sbjct: 152 LLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKD 211

Query: 96  T-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
                 +F  L  C++    + ++ DML+ AY++  +   G  +F+R    G   +V++ 
Sbjct: 212 DLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 271

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  L+K    +    VY+EM+R  I  NL +FN + + LCK G   K +  +E M+ 
Sbjct: 272 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 331

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P +VTYN LI+ YC+K   G++  A  ++K M   G++P+ V++  L++G CK+  
Sbjct: 332 EGFDPDIVTYNTLINSYCRK---GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 388

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F  M   G++  +VTYN+LI+G C +GK+ E+ +L  +M+ +G+ P+  T   
Sbjct: 389 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 448

Query: 335 LINGF-----------------------------------CKKKLVEKARVLFDDISEQG 359
           L+ G+                                   C++     A+ L + +S+ G
Sbjct: 449 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDG 508

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
               +  YN LI ++C+   + +A  ++  M+D+ + P+++TY  +J  LSR        
Sbjct: 509 HKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGE 568

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           +++ E+V +G    L     L    C++    KA SLL       KE +  +  ++N LI
Sbjct: 569 SLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS---FXAKEFQIHDTESFNALI 625

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +    KG +  +  + + +L+ GL+PN  T + V
Sbjct: 626 RITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYV 659



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 185/355 (52%), Gaps = 22/355 (6%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           F+ ++    + G++ +       M  +G  P V+T N L++G  K     + ++   V++
Sbjct: 236 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWE---VYE 292

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M   GI PN  TFN L    CKD +     K  E+M   G    +VTYN+LIN  C  G
Sbjct: 293 EMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKG 352

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +LD+A  L   M   G+ P++V+  AL+NG CK+  V +A  LF  +  +GLSP ++TYN
Sbjct: 353 RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYN 412

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLI  YCKEG+M+++ ++ + M+  G+ PD  T   L+ G  +EG      N++ EL   
Sbjct: 413 TLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRF 472

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+      Y+ L+ ALC++ +   A +LL+   +M ++     +  YN LIK FCQ   +
Sbjct: 473 GVSISQDIYSYLIVALCRENRPFAAKNLLE---RMSQDGHKXELEIYNELIKSFCQCDCI 529

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVR----------------EEMMEKGFIPDIE 527
            +A  L  E+++K + PN  TY+ V                  EM+  G +PD+E
Sbjct: 530 AEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLE 584



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 38/343 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    +++ N L+ +  ++G+ +D  Y+YK M RR +  +L S+  ++NGLCK G++ +A
Sbjct: 333 GFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREA 392

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +   M   G+SP +VTYN LI GYCK+G   KM ++ ++  DM+ NGI P+  T   L
Sbjct: 393 HQLFHRMVHRGLSPDIVTYNTLIHGYCKEG---KMQESRSLLHDMIWNGISPDSFTCWVL 449

Query: 266 IDGF-----------------------------------CKDENISAAMKVFEEMGSHGI 290
           ++G+                                   C++    AA  + E M   G 
Sbjct: 450 VEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGH 509

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              +  YN LI   C    + EA+ L+ EM+   +KPN+ T  A+J    +     +   
Sbjct: 510 KXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGES 569

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L  ++   G  P +     L   YC+E  ++ A ++ +       + D  ++N LI   S
Sbjct: 570 LVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITS 629

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            +G++     I + ++  G+    +T   ++  L K  +   A
Sbjct: 630 AKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 164/373 (43%), Gaps = 37/373 (9%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + +F    H+  K+G    V+     +    +    + +  + L+ +Y +  +    F
Sbjct: 301 PNLYTFNILTHVLCKDGDTGKVNKFLEKME--EEGFDPDIVTYNTLINSYCRKGRLDDAF 358

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             +K     G+   ++S   L+  L KEG+  +   ++  M  R +  ++ ++N +++G 
Sbjct: 359 YLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGY 418

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           CK GK+ ++  ++ DM   G+SP   T  +L++GY K+G                     
Sbjct: 419 CKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQ 478

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                         + + A  + + M ++G       +N LI  FC+ + I+ A+ +  E
Sbjct: 479 DIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKME 538

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M    I   + TY ++J  L    +  E  +L  EM+ASG  P++    AL  G+C++  
Sbjct: 539 MVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCREND 598

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++KA  L    +++       ++N LI     +G +  +  +++ ML  G+LP+  T   
Sbjct: 599 IDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKY 658

Query: 405 LIAGLSREGNVEG 417
           +I GL +   V+ 
Sbjct: 659 VIDGLWKARRVDS 671



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 34/293 (11%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G+      +FH +      L  + +  + L+  Y K  K              G+   
Sbjct: 385 KEGRVREAHQLFHRM--VHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
             +C  L+    KEGKF     +  E++R  + ++ D +++++  LC+  +   A +++E
Sbjct: 443 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 502

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGK------------------MYKA--------- 243
            M   G   ++  YN LI  +C+   I +                   Y+A         
Sbjct: 503 RMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLS 562

Query: 244 -----DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
                +++  +MV +G LP+      L  G+C++ +I  A  +              ++N
Sbjct: 563 RSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFN 622

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
           +LI      G +  ++ ++D M+  GL PN +T   +I+G  K + V+ A ++
Sbjct: 623 ALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSASLM 675


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  N      ++ + VK  +  L  + F +    G+          +RA  +    +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M+   ++ +   +N ++ GLCK  ++ +A ++   M ++GV+   VTY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+C+   + ++  A  +  DM+  G +P+E   + +ID   K E +  A  +  ++G  
Sbjct: 276 YGFCR---MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V  YN+LI+ LC + + D+A  L  EM   GL+PN VT   LI+  CK+ ++E A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LFD + ++G+  +V  YN+LI+ YCK+G ++ A  + + M+  G+ P  ++Y+ LIAG
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R G++     +  E+   G+     T+  L+   CKD K  +A  L D   KM     
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD---KMIDSNV 509

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            PN VT+NV+I+G+C  G +  A  L ++++E GL P+  TY+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 9/400 (2%)

Query: 131 KPHLGFEAFKRA---GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  L  EAF  A   GD G+  +V + N L+  L K  +F+D + ++KEM  R +E N  
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  +++ LCK G +  A  + + M+  G+   V  YN LI+GYCK+G + +   A  + 
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---ARGLL 431

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV+ G+ P   +++ LI G C++ ++S+ M++  EM   GIA    T+ +LING C D
Sbjct: 432 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKD 491

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K+DEA  L D+M+ S + PN VT N +I G+C    + KA  L+D + E GL P   TY
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +LI   C    +  A      + +   + +  +   L+ G  REG      ++ +E+  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 611

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  LV++ I+V A  K    +K+  L  EM   +++   P+ + Y  +I    ++  
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEEN 668

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +  A    ++++  G  PN  T+ ++   + + G++   E
Sbjct: 669 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAE 708



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 102/525 (19%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G    V  +F A +   D LC+N    D   L              FK     GL+ +
Sbjct: 328 KLGDLGMVPNVF-AYNALIDKLCKNERFDDADRL--------------FKEMAGRGLEPN 372

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            ++   L+ AL K G  ED   ++ +M+ + I++ +  +N ++NG CK G L++A  ++ 
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G++P   +Y+ LI G C+ G +    +   + ++M E GI  N  TF  LI+GFC
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCME---LHREMAERGIAWNNYTFTALINGFC 489

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           KD+ +  A ++F++M    +    VT+N +I G C+ G + +A  L D+M+  GLKP+  
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 331 TSNALINGFCKKKLVEKARV-----------------------------------LFDDI 355
           T  +LI+G C    V KA                                     L+D++
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           + +G+   ++++  ++ A  K+   E +  +   M ++GV PD   Y C+I  LS+E N+
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------- 462
               N  +++V +G     VT+ +L+  LCK G    A  L  EM               
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 463 ---------MEKEK---------KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                    MEK K            +IV++N+LIKG C+ GK+++A  L++++ E G  
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFS 789

Query: 505 PNQTTYQ-IVRE---------------EMMEKGFIPDIEGHMYNI 533
           P+  +Y  I+ E               EM+ KG  PD+    YNI
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA--YNI 832



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 22/433 (5%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +  +++  ++LM    KNM+     E      + G+ +  ++   L+    +  + E
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M R     +  + +F+++ L K   + +A  +   +  LG+ P V  YN LI
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK     +   AD +FK+M   G+ PNEVT+  LI   CK   I  A+ +F++M   
Sbjct: 346 DKLCKNE---RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   V  YNSLING C  G LD A  L   M+  GL P   + + LI G C+   +   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L  +++E+G++ +  T+  LI+ +CK+ +M++A  + + M+D  V+P+  T+N +I G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
               GN+     + +++V  G++    TY  L+  LC      KA   + +   +E    
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD---LENSYA 579

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
             N  +   L+ GF ++G+  +   L +E+  +G+  +  ++ I+               
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 515 --EEMMEKGFIPD 525
              EM E+G  PD
Sbjct: 640 LFREMKEQGVKPD 652



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 186/407 (45%), Gaps = 36/407 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + G+  +  +   L+    K+ K ++   ++ +M    +  N  +FN ++ G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C  G + KA  + + M  +G+ P   TY  LI G C   G+                   
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+  +   ++ +M   G+  + V+F  ++    K  +   +  +F E
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    + Y  +I+ L  +  + +A+   D+M+  G  PN VT   LIN  CK   
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +  A +L  ++    + P+  TYN  +D +  EG ME A  + ++ML +G L  + ++N 
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL + G ++   ++M+++  +G     ++Y+ ++  LCK G   KA  L +EM  + 
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM--LY 820

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           K  K P++V YN+ I+     G+ + A G+   ++  G+ PN  TY+
Sbjct: 821 KGLK-PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 4/293 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S   LL    +EG+F +  +++ EM  R ++L+L SF  ++    K     K+  +  +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  GV P  + Y  +ID   K+     M +A   +  MV +G  PN VT   LI+  CK
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEE---NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 700

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + +EM +  +     TYN  ++    +G +++A  L   M+   L  ++V+
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVS 759

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CK   +++A  L   I+E G SP  I+Y+T+I   CK G +  AF + N ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +G+ PDV  YN  I   +  G  +    I   ++ +G++    TY  L+  +
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 192/400 (48%), Gaps = 13/400 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY--VKNMKPHLGFEAFKR 141
           + ++ F K+ K    + +F  +     ++  N +  ++++  Y  V N++    F+ + +
Sbjct: 483 ALINGFCKDKKMDEAARLFDKM--IDSNVIPNEVTFNVMIEGYCLVGNIRK--AFQLYDQ 538

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + GLK    +   L+  L              +++     LN  S   +L G  + G+
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             +   + ++M   GV   +V++ I++    K+       K+  +F++M E G+ P+++ 
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH---DKEKSCVLFREMKEQGVKPDDIF 655

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  +ID   K+EN+  A+  +++M   G +   VT+  LIN LC  G L  A  L  EM+
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A  + PN  T N  ++ F  +  +EKA+ L   +  QG   S++++N LI   CK G+++
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ 774

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + + + G  PD  +Y+ +I  L + G++     + NE++  G++  +V YNI +
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
                 G+S KA+ +   M +   +  W    TY  L+ G
Sbjct: 835 RWCNVHGESDKALGIYTNMIRSGVQPNWD---TYRALLSG 871



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           + +GI  N+ T + ++    K    + A  +F++M   G+      Y + I   C    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  L   M + G+K + V  N L+ G CK   V++A  + + +   G++   +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 371 IDAYC-----------------------------------KEGRMEDAFAMRNSMLDRGV 395
           +  +C                                   K+  +E+AF++   + D G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+V  YN LI  L +    +    +  E+   G+    VTY IL+ ALCK G  + A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L D   KM  +     +  YN LI G+C++G L+ A GLL+ ++++GL P   +Y
Sbjct: 395 LFD---KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 3/239 (1%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S GI     T + ++  L    +   A  L D+M+ SG+  +     A I  +C+ + ++
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR L   +  +G+  S + YN L+   CK  R+++A  ++N M++ GV  D  TY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  R   +E    I ++++  G        + ++  L K    ++A SL     K+   
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL---ACKLGDL 332

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              PN+  YN LI   C+  + +DA+ L  E+  +GL PN+ TY I+   + ++G I D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 208/400 (52%), Gaps = 3/400 (0%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 13  HTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFS 72

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++ L     +C ++L  L+K   F+ V   Y+E+   
Sbjct: 73  GLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 132

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G +  A  + + +   G+ P VV+YN L++GY + G + + 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M+ +G  P+  T++ LI+G CK+  +  A ++F+EM   G+    VT+ +L
Sbjct: 193 FRLKSA---MLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTL 249

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A  L D++S +GL
Sbjct: 250 IDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGL 309

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG ++ AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 310 KPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 369

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           ++ E+++ G+     TY +++   CK G   K   LL EM
Sbjct: 370 MLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 160/279 (57%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++++E G   +   FN L+  FCKD +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 126 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 185

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M+ASG  P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 186 LGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVT 245

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 246 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 305

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++    TY  L+   CK+G        LD  F   K     NI    V Y  LI G 
Sbjct: 306 XKGLKPDKFTYTTLIDGCCKEGD-------LDTAFXHRKRMIQENIRLDDVAYTALISGL 358

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 359 CQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKG 397



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 179/351 (50%), Gaps = 6/351 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+     ++ +  D+   VL  L K         
Sbjct: 65  RSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E++   G    +  +NIL+  +CK G I     A +VF  + + G+ P+ V++NTL++
Sbjct: 125 FYEEILECGYPASLYFFNILMHRFCKDGDI---RVAQSVFDAITKWGLRPSVVSYNTLMN 181

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G    V TY+ LINGLC + K+D A  L DEM+  GL P
Sbjct: 182 GYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVP 241

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 242 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 301

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 302 DEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQE 361

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           G+S  A  +L EM  +      P+  TY ++I  FC+KG +   + LL E+
Sbjct: 362 GRSVDAEKMLREMLSVGLX---PDAGTYTMIINEFCKKGDVWKGSKLLKEM 409


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E++N G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M   G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLNVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 159/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M  SG++P+V T + LING CK+  ++ A VLFD++ ++GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G+    +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANV 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E++ KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLXPDKITY 314



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTQQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY                 ++ 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            +GL   V + N +LR  ++ G F     V+  M R  +  +  SF  ++   C+ GK+ 
Sbjct: 131 SHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVE 190

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   ++  M   G S    T  +++   C+K   G+       F+ M+E G  PN V + 
Sbjct: 191 EVDALLAAMWRYGFSLDNATCTVVVRSLCEK---GRFKDVSEFFRRMLEMGTPPNVVNYT 247

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-A 322
             IDG CK   +  A  V EEM   G+   V T+ +LI+GLC  G  + A  L  +++ +
Sbjct: 248 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 307

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           S  KPNV T   +I G+C++  + +A +L   + EQGL P+  TY TLI  +CK G  + 
Sbjct: 308 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 367

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           AF + N M   G LP++ TYN +I G  ++G ++    ++    + G++   +TY IL+ 
Sbjct: 368 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILIT 427

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
             CK G    A+ L D   +M +    P+I  Y  LI  +CQ+ ++E++    ++ L  G
Sbjct: 428 EHCKQGHITYALDLFD---RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 484

Query: 503 LIPNQTTY 510
           L+P + TY
Sbjct: 485 LLPTKQTY 492



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 179/356 (50%), Gaps = 27/356 (7%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYKADAVFKDMVENGI 255
           +AG+L +A+D++ +M+S G+   V T N ++     + G+  G    A  VF  M   G+
Sbjct: 115 EAGRLPEAADMVLEMRSHGLPLCVETANWVL-----RVGLETGSFVYARKVFDGMTRAGV 169

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+E +F  L+   C++  +     +   M  +G +    T   ++  LC  G+  +   
Sbjct: 170 CPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 229

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
               M+  G  PNVV   A I+G CK++ V++A  + +++  +GL P+V T+ TLID  C
Sbjct: 230 FFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 289

Query: 376 KEGRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           K G  E AF +   ++      P+V TY  +I G  REG +     ++  +V  G++   
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L+G  CK G   +A  L++   KM++E   PNI TYN +I GFC+KGK+++A  +
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMN---KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 406

Query: 495 LNELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNIS 534
           L     +GL  ++ TY I+  E                M+E G  PDIE +   IS
Sbjct: 407 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG      +C  ++R+L ++G+F+DV   ++ M       N+ ++   ++GLCK   + +
Sbjct: 202 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQ 261

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL-PNEVTFN 263
           A  ++E+M   G+ P V T+  LIDG CK   IG   +A  +F  ++++    PN  T+ 
Sbjct: 262 AFHVLEEMVGRGLKPNVYTHTTLIDGLCK---IGWTERAFRLFLKLIKSSSYKPNVHTYT 318

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I G+C++  ++ A  +   M   G+     TY +LI G C  G  D A  L ++M   
Sbjct: 319 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 378

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+ T NA+I+GFCKK  +++A  +    + QGL    ITY  LI  +CK+G +  A
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 438

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M++ G  PD+  Y  LI+   ++  +E  +   ++ +  G+     TY  ++  
Sbjct: 439 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 498

Query: 444 LCKDGKSKKAVSLLDEMFK 462
            CK G+S  A+ + + M +
Sbjct: 499 YCKVGRSTMALRVFERMVQ 517



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 148/312 (47%), Gaps = 12/312 (3%)

Query: 91  KNGKFTSVSTIFH---ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           + G+F  VS  F     + T  + +   + I  +    YVK       F   +     GL
Sbjct: 220 EKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQ-----AFHVLEEMVGRGL 274

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           K +V +   L+  L K G  E    ++ K +K    + N+ ++  ++ G C+ GKL +A 
Sbjct: 275 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 334

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++  M   G+ P   TY  LI G+CK G   + ++   +   M + G LPN  T+N +I
Sbjct: 335 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE---LMNKMKQEGFLPNIYTYNAVI 391

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK   I  A KV     S G+    +TY  LI   C  G +  A+ L D M+ +G  
Sbjct: 392 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 451

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++    +LI+ +C+++ +E+++  FD     GL P+  TY ++I  YCK GR   A  +
Sbjct: 452 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRV 511

Query: 387 RNSMLDRGVLPD 398
              M+  G   D
Sbjct: 512 FERMVQNGCFAD 523



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 23/300 (7%)

Query: 251 VENGILP--NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           V  G LP  +EV    ++  F +   +  A  +  EM SHG+   V T N ++      G
Sbjct: 94  VARGSLPMAHEV-MRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETG 152

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
               A  + D M  +G+ P+  +  AL+   C++  VE+   L   +   G S    T  
Sbjct: 153 SFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 212

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            ++ + C++GR +D       ML+ G  P+V  Y   I GL +   V+   +++ E+V  
Sbjct: 213 VVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 272

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++  + T+  L+  LCK G +++A  L  ++ K    K  PN+ TY V+I G+C++GKL
Sbjct: 273 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGKL 330

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYN 532
             A  LL  ++E+GL PN  TY                  +  +M ++GF+P+I  + YN
Sbjct: 331 ARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNI--YTYN 388


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  N      ++ + VK  +  L  + F +    G+          +RA  +    +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M+   ++ +   +N ++ GLCK  ++ +A ++   M ++GV+   VTY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+C+   + ++  A  +  DM+  G +P+E   + +ID   K E +  A  +  ++G  
Sbjct: 276 YGFCR---MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V  YN+LI+ LC + + D+A  L  EM   GL+PN VT   LI+  CK+ ++E A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LFD + ++G+  +V  YN+LI+ YCK+G ++ A  + + M+  G+ P  ++Y+ LIAG
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R G++     +  E+   G+     T+  L+   CKD K  +A  L D   KM     
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD---KMIDSNV 509

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            PN VT+NV+I+G+C  G +  A  L ++++E GL P+  TY+
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 20/425 (4%)

Query: 117 IIIDMLMLAYVKN-----------MKPHLGFEAFKRA---GDYGLKSSVLSCNQLLRALV 162
           I  DM+ L +V +            K  L  EAF  A   GD G+  +V + N L+  L 
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K  +F+D + ++KEM  R +E N  ++  +++ LCK G +  A  + + M+  G+   V 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
            YN LI+GYCK+G + +   A  +   MV+ G+ P   +++ LI G C++ ++S+ M++ 
Sbjct: 410 PYNSLINGYCKQGSLDR---ARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
            EM   GIA    T+ +LING C D K+DEA  L D+M+ S + PN VT N +I G+C  
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             + KA  L+D + E GL P   TY +LI   C    +  A      + +   + +  + 
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L+ G  REG      ++ +E+   G++  LV++ I+V A  K    +K+  L  EM  
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-- 644

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            +++   P+ + Y  +I    ++  +  A    ++++  G  PN  T+ ++   + + G+
Sbjct: 645 -KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 523 IPDIE 527
           +   E
Sbjct: 704 LGSAE 708



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 102/525 (19%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G    V  +F A +   D LC+N    D   L              FK     GL+ +
Sbjct: 328 KLGDLGMVPNVF-AYNALIDKLCKNERFDDADRL--------------FKEMAGRGLEPN 372

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            ++   L+ AL K G  ED   ++ +M+ + I++ +  +N ++NG CK G L++A  ++ 
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G++P   +Y+ LI G C+ G +    +   + ++M E GI  N  TF  LI+GFC
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCME---LHREMAERGIAWNNYTFTALINGFC 489

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           KD+ +  A ++F++M    +    VT+N +I G C+ G + +A  L D+M+  GLKP+  
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 331 TSNALINGFCKKKLVEKARV-----------------------------------LFDDI 355
           T  +LI+G C    V KA                                     L+D++
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           + +G+   ++++  ++ A  K+   E +  +   M ++GV PD   Y C+I  LS+E N+
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------- 462
               N  +++V +G     VT+ +L+  LCK G    A  L  EM               
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 463 ---------MEKEK---------KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                    MEK K            +IV++N+LIKG C+ GK+++A  L++++ E G  
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFS 789

Query: 505 PNQTTYQ-IVRE---------------EMMEKGFIPDIEGHMYNI 533
           P+  +Y  I+ E               EM+ KG  PD+    YNI
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA--YNI 832



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 22/433 (5%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +  +++  ++LM    KNM+     E      + G+ +  ++   L+    +  + E
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M R     +  + +F+++ L K   + +A  +   +  LG+ P V  YN LI
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK     +   AD +FK+M   G+ PNEVT+  LI   CK   I  A+ +F++M   
Sbjct: 346 DKLCKNE---RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   V  YNSLING C  G LD A  L   M+  GL P   + + LI G C+   +   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L  +++E+G++ +  T+  LI+ +CK+ +M++A  + + M+D  V+P+  T+N +I G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
               GN+     + +++V  G++    TY  L+  LC      KA   + +   +E    
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD---LENSYA 579

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
             N  +   L+ GF ++G+  +   L +E+  +G+  +  ++ I+               
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 515 --EEMMEKGFIPD 525
              EM E+G  PD
Sbjct: 640 LFREMKEQGVKPD 652



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 186/407 (45%), Gaps = 36/407 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + G+  +  +   L+    K+ K ++   ++ +M    +  N  +FN ++ G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C  G + KA  + + M  +G+ P   TY  LI G C   G+                   
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+  +   ++ +M   G+  + V+F  ++    K  +   +  +F E
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    + Y  +I+ L  +  + +A+   D+M+  G  PN VT   LIN  CK   
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +  A +L  ++    + P+  TYN  +D +  EG ME A  + ++ML +G L  + ++N 
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL + G ++   ++M+++  +G     ++Y+ ++  LCK G   KA  L +EM  + 
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM--LY 820

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           K  K P++V YN+ I+     G+ + A G+   ++  G+ PN  TY+
Sbjct: 821 KGLK-PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 4/293 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S   LL    +EG+F +  +++ EM  R ++L+L SF  ++    K     K+  +  +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  GV P  + Y  +ID   K+     M +A   +  MV +G  PN VT   LI+  CK
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEE---NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 700

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + +EM +  +     TYN  ++    +G +++A  L   M+   L  ++V+
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVS 759

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CK   +++A  L   I+E G SP  I+Y+T+I   CK G +  AF + N ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +G+ PDV  YN  I   +  G  +    I   ++ +G++    TY  L+  +
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 192/400 (48%), Gaps = 13/400 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY--VKNMKPHLGFEAFKR 141
           + ++ F K+ K    + +F  +     ++  N +  ++++  Y  V N++    F+ + +
Sbjct: 483 ALINGFCKDKKMDEAARLFDKM--IDSNVIPNEVTFNVMIEGYCLVGNIRK--AFQLYDQ 538

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + GLK    +   L+  L              +++     LN  S   +L G  + G+
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             +   + ++M   GV   +V++ I++    K+       K+  +F++M E G+ P+++ 
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH---DKEKSCVLFREMKEQGVKPDDIF 655

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  +ID   K+EN+  A+  +++M   G +   VT+  LIN LC  G L  A  L  EM+
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A  + PN  T N  ++ F  +  +EKA+ L   +  QG   S++++N LI   CK G+++
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ 774

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + + + G  PD  +Y+ +I  L + G++     + NE++  G++  +V YNI +
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
                 G+S KA+ +   M +   +  W    TY  L+ G
Sbjct: 835 RWCNVHGESDKALGIYTNMIRSGVQPNWD---TYRALLSG 871



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 38/296 (12%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           + +GI  N+ T + ++    K    + A  +F++M   G+      Y + I   C    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  L   M + G+K + V  N L+ G CK   V++A  + + +   G++   +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 371 IDAYC-----------------------------------KEGRMEDAFAMRNSMLDRGV 395
           +  +C                                   K+  +E+AF++   + D G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+V  YN LI  L +    +    +  E+   G+    VTY IL+ ALCK G  + A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           L D   KM  +     +  YN LI G+C++G L+ A GLL+ ++++GL P   +Y 
Sbjct: 395 LFD---KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 3/239 (1%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S GI     T + ++  L    +   A  L D+M+ SG+  +     A I  +C+ + ++
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR L   +  +G+  S + YN L+   CK  R+++A  ++N M++ GV  D  TY  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  R   +E    I ++++  G        + ++  L K    ++A SL     K+   
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL---ACKLGDL 332

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              PN+  YN LI   C+  + +DA+ L  E+  +GL PN+ TY I+   + ++G I D
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 236/494 (47%), Gaps = 40/494 (8%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKI------RSFLHMFVKNGKFTSVSTIFHAL--STCS-DS 111
           H L    RL  ++ + K  P +       S ++   +  +      +F  +  S CS D 
Sbjct: 286 HGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  N ++  +  L  +     H+  E  +R    G   +V++ + L++ L   G+     
Sbjct: 346 ITYNILLKGLCKLRRIPEAYRHV--ELMRRT--EGCSPNVVTFSTLIQGLCNAGRVNQAW 401

Query: 172 YVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM--------KSLGV----- 217
            VY+ M     I  N  ++ F+L GLCKAG   +     E M         S  +     
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV 461

Query: 218 --------SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
                    P +VTYN L+ G  K G +     A  + + M+E+G+ P+ +TFN+++DG 
Sbjct: 462 DFLMVQVCRPTLVTYNTLVTGLSKSGMV---RDALGLLEFMIESGLSPDVITFNSVLDGL 518

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK++ I  A  VF+     G    VVTY++LI+GL    K+DEA+ L  +M+  G + N 
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT + +++G  K   +E A V+   + + G  P  +TYNTLID + K  R+ +A  +   
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           ML+ G  P V TY  L  GL R G  +    I++ +   G     +TY+ +V  LCK G+
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+   ++M +   E   P+++ Y+ LI G C+ G++++A   L  ++  G IP+  T
Sbjct: 699 VTEALGYFEKMAR--DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT 756

Query: 510 YQIVREEMMEKGFI 523
           + I+   + + G I
Sbjct: 757 FSILINGLCDAGRI 770



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 223/466 (47%), Gaps = 64/466 (13%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N++  + L+ A +   +    F   +R    G    +++   +++ L KEG+ E    V 
Sbjct: 70  NAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 129

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  R    +++    +L+ LC+ G++++A    + +  +G +P  VTYN ++DG  K 
Sbjct: 130 DEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKA 189

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   ++  A  V + + E+   P   TF   +DG  K  N++ A + F+ M   G++   
Sbjct: 190 G---RLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 295 VTYNSLINGLCVDGKLDEAVAL-RDEMMASGL---------------------------- 325
           VTY++LI+GLC  GKLD A+ L RD+   +G+                            
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC 306

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNVV  N+L+NG C+ + V++A  LFD + E G S  VITYN L+   CK  R+ +A+ 
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY- 365

Query: 386 MRNSMLDR---GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILV 441
            R+  L R   G  P+V T++ LI GL   G V     +   +V   G+     TY  L+
Sbjct: 366 -RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKW----------------------PNIVTYNVLI 479
             LCK G S++    L++ F+   E++W                      P +VTYN L+
Sbjct: 425 EGLCKAGDSRR----LEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLV 480

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
            G  + G + DA GLL  ++E GL P+  T+  V + + ++  I D
Sbjct: 481 TGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 217/449 (48%), Gaps = 47/449 (10%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D LC+   I+D                  FKRA + G + +V++ + L+  L K  K ++
Sbjct: 516 DGLCKEQRILD--------------AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 561

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +  +M       N  +++ V++GL K G++  A  ++  M+  G  P  VTYN LID
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+ K+    ++ +A  + ++M+E G  P+ VT+ TL  G C+      A+++ + M + G
Sbjct: 622 GFFKR---QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVAL-----RDEMMASGLKPNVVTSNALINGFCKKKL 344
            A   +TY+S+++GLC  G++ EA+       RDE++A    P+V+  +ALI+G CK   
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA----PHVIAYSALIDGLCKAGR 734

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A    + +   G  P V+T++ LI+  C  GR++    +   M +RG   D+  YN 
Sbjct: 735 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNA 794

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           +I     +G       ++ E+  +G+    VT+ I++ ALC + +  +AVS    + +  
Sbjct: 795 MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR---------- 514
           +++     ++YN LI       + E A  LL  ++  G  P+   Y  V           
Sbjct: 855 RDE-----ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPE 909

Query: 515 ------EEMMEKGFIPDIEGHMYNISGTS 537
                 +EM  +G  PD+  +   ISG S
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLS 938



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 194/404 (48%), Gaps = 12/404 (2%)

Query: 115  NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
            +++  + L+  + K  +        +   + G   SV++   L   L + G+F++   + 
Sbjct: 612  DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 175  KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCK 233
              M  R    N  +++ +++GLCKAG++ +A    E M +   V+P V+ Y+ LIDG CK
Sbjct: 672  DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 731

Query: 234  KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
             G I + Y+     + M+  G +P+ VTF+ LI+G C    I   +++F  M   G  A 
Sbjct: 732  AGRIDEAYE---FLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKAD 788

Query: 294  VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
            +  YN++IN  C+ G+   A AL +EM   G+  N VT   +I   C    +++A   F 
Sbjct: 789  IYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFH 848

Query: 354  DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
             I E       I+YNTLI +     R E A  +  +M+  G  PD   Y  ++ GL + G
Sbjct: 849  SIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAG 906

Query: 414  NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            + E    ++ E+ + G    L TY I++  L K  +   A    +EM +   +   P+ +
Sbjct: 907  SPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK---PDAI 963

Query: 474  TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
             Y+ LI  FC+  K++DA  LL      G+ P  T Y  + + +
Sbjct: 964  VYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSL 1004



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 195/376 (51%), Gaps = 12/376 (3%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L K G+  D    +++  +      + +++ V++GLC+  +++K   ++E+M  
Sbjct: 5   NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P  VTYN L++      G G+  +A ++ + M  NG  P  +TF  +I G CK+  
Sbjct: 65  RGCAPNAVTYNTLVNALL---GQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           I AA +V +EM   G    V  +  L++ LC  G++DEA     +++  G  P+ VT N 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +++G  K   +E A ++   ++E   SP+V T+   +D   K G +  A+   +SM   G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           V P+  TY+ LI GL + G ++    ++    +   +AG+  ++ L+  LC+  + ++A+
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAI 298

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL  M  +      PN+V +N L+ G CQ  ++++A  L + + E G   +  TY I+ 
Sbjct: 299 QLLKAMPCV------PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILL 352

Query: 515 EEMMEKGFIPDIEGHM 530
           + + +   IP+   H+
Sbjct: 353 KGLCKLRRIPEAYRHV 368



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 6/277 (2%)

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
           +VTYN+LI+G CK G +   + A   F+  ++ G  P  VT++T+IDG C+D  +    K
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTA---FRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCK 57

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           + EEM   G A   VTYN+L+N L   G+  EA +L + M A+G  P ++T   +I G C
Sbjct: 58  LLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC 117

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  +E A  + D++ ++G  P V  +  L+ A C+ GR+++A+     +L  G  PD  
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TYN ++ GL + G +E    ++  L  +     + T+ I V  L K G    A    D  
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD-- 235

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             M +    PN VTY+ LI G C+ GKL+ A GLL +
Sbjct: 236 -SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD 271



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 208/431 (48%), Gaps = 26/431 (6%)

Query: 113 CR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           CR N +    L+    K  K     +   +  + G +++ ++ + ++  L+K G+ ED  
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V ++M+      +  ++N +++G  K  +L +A  ++ +M   G  P VVTY  L  G 
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C+ G   +  +A  +   M   G  PN +T+++++DG CK   ++ A+  FE+M    + 
Sbjct: 659 CRSG---RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715

Query: 292 AG-VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A  V+ Y++LI+GLC  G++DEA    + M+ +G  P+VVT + LING C    ++    
Sbjct: 716 APHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LF  ++E+G    +  YN +I+AYC +G    A+A+   M   G+  +  T+  +I  L 
Sbjct: 776 LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALC 835

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
               ++   +  + +  +      ++YN L+ +L    +S++A+ LL  M     +   P
Sbjct: 836 GNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRRSEQALELLRAMV---ADGGSP 890

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------R 514
           +   Y  ++ G  + G  E A  LL E+  +G  P+  TY I+                 
Sbjct: 891 DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950

Query: 515 EEMMEKGFIPD 525
           EEM+ K   PD
Sbjct: 951 EEMLRKNLKPD 961


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 199/392 (50%), Gaps = 6/392 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G    +R  + G + S  +   ++    +E K ++ E + +EM  + +   + +   V+N
Sbjct: 95  GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 154

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             CK G+++ A  ++E MK  G  P V TYN L+ G+C +G   K++KA  +   M   G
Sbjct: 155 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVHKAMTLLNKMRACG 211

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+N LI G C D +I +A ++   M   G+ A   TYN+LIN LC DG+ D+A 
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L D +   G+KPN VT N+LING CK    + A    + +   G +P   TY++ I+  
Sbjct: 272 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 331

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK    ++  +    ML + V P    Y  +I  L +E N   V     E+V++G    +
Sbjct: 332 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 391

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY   + A C +G+  +A ++L E   M K     + + YN L+ G    G+ + A  +
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 448

Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           L ++     +PNQ TY I+   ++    + D+
Sbjct: 449 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 480



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 23/402 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + GL   V++C  ++ A  KEG+  D   V + MK R  + N+ ++N ++ G 
Sbjct: 132 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 191

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C  GK++KA  ++  M++ GV+P  VTYN+LI G C  G I   ++   + + M  +G++
Sbjct: 192 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR---LLRLMEGDGLI 248

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            ++ T+N LI+  CKD     A  +F+ + + GI    VT+NSLINGLC  GK D A   
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 308

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+++G  P+  T ++ I   CK K  ++      ++ ++ + PS + Y  +I    K
Sbjct: 309 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 368

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           E            M+  G  PDV TY   +     EG +    N++ E+  NG+    + 
Sbjct: 369 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 428

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK---------------- 480
           YN L+      G++  AVS+L +M  +      PN  TY +L++                
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASV---PNQFTYFILLRHLVRMRLVEDVLPLTP 485

Query: 481 -GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            G  +  +L D  GL + + +   +PN  TY  + E   E G
Sbjct: 486 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDG 527



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 169/330 (51%), Gaps = 10/330 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +FN ++ G C+  +++ A D+ + M   G +  VV+Y  LI+G C+ G I +   A  +F
Sbjct: 12  TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE---AVELF 68

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M +    P+   +  L+ G C  E     + +   M   G       Y ++++  C +
Sbjct: 69  GEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K  EA  +  EM   GL P VVT  A+IN +CK+  +  A  + + +  +G  P+V TY
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N L+  +C EG++  A  + N M   GV PD  TYN LI G   +G++E    ++  +  
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G+ A   TYN L+ ALCKDG++ +A SL D    +E     PN VT+N LI G C+ GK
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFD---SLETRGIKPNAVTFNSLINGLCKSGK 301

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            + A   L +++  G  P+  TY    E +
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 331



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 17/390 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +    + N L+    +  + +    ++ +M  R    ++ S+  ++ GLC+AG++++A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYC--KKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            ++  +M      P +  Y  L+ G C  ++G  G +     + + M E G  P+   + 
Sbjct: 65  VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLL-----MLRRMKELGWRPSTRAYA 115

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++D  C++     A ++ +EM   G+A  VVT  ++IN  C +G++ +A+ + + M   
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 175

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G KPNV T NAL+ GFC +  V KA  L + +   G++P  +TYN LI   C +G +E A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F +   M   G++ D  TYN LI  L ++G  +   ++ + L   G++   VT+N L+  
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           LCK GK+  A   L+   KM      P+  TY+  I+  C+    ++    + E+L+K +
Sbjct: 296 LCKSGKADIAWKFLE---KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 352

Query: 504 IPNQTTYQIVREEMMEK---GFIPDIEGHM 530
            P+   Y IV  +++++   G +    G M
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEM 382



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 122/557 (21%), Positives = 246/557 (44%), Gaps = 77/557 (13%)

Query: 25  KNTDPNTVILQLFNSDADPVLI-----LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKY 79
           K  +   ++ ++F     P ++     +  +C   KE R S +L    R+L  + +    
Sbjct: 126 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC---KEGRMSDAL----RVLELMKLRGCK 178

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCS---DSLCRNSIIIDMLMLAYVKNMKPH 133
           P + ++   +  F   GK     T+ + +  C    D++  N +I    +  ++++    
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES---- 234

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             F   +     GL +   + N L+ AL K+G+ +    ++  ++ R I+ N  +FN ++
Sbjct: 235 -AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-------IGKMYKADA- 245
           NGLCK+GK + A   +E M S G +P   TY+  I+  CK  G       IG+M + D  
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353

Query: 246 ------------------------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
                                    + +MV +G  P+ VT+ T +  +C +  ++ A  V
Sbjct: 354 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 413

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
             EM  +G+    + YN+L++G    G+ D AV++  +M +    PN  T   L+    +
Sbjct: 414 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR 473

Query: 342 KKLVEKARVL-----------------FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +LVE    L                 FD + +    P+  TY+++++ + ++GR E+A 
Sbjct: 474 MRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 533

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
           ++ + M +  +  +   Y  L+    +         ++  ++ +G    L++Y  L+  L
Sbjct: 534 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 593

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
             +G++ KA     E+F   + K + P+ + + V+I G  +KG  + +  ++  L     
Sbjct: 594 ICEGQTDKA----KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 649

Query: 504 IPNQTTYQIVREEMMEK 520
            P+  TY ++ EE+ ++
Sbjct: 650 RPSHQTYAMLTEELPDR 666


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 232/479 (48%), Gaps = 52/479 (10%)

Query: 39  SDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSV 98
           SDA  ++ L +F W                       A  YPK R F+ +++        
Sbjct: 91  SDAGSMVTLSFFHW-----------------------AIGYPKFRHFMRLYI-------- 119

Query: 99  STIFHALSTCSDSLC--RNSIIIDMLMLAYVKNM----KPHLGFEAFKRAGDYGLKSSVL 152
                    C+ SL   RNS     +M   V++     +     E      + GL  +  
Sbjct: 120 --------VCAMSLIGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTR 171

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           + N +++   + G  E  E +++EM  R ++ +  S+  ++   CK G + +A   +  M
Sbjct: 172 TLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVM 231

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
              G      T+ ++I  +    G G   +A   F+ +V+ G+ PN + F  +I+G CK 
Sbjct: 232 LERGFVVDNATFTLIISRF---SGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKR 288

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS-GLKPNVVT 331
            +I  A ++ EEM   G    V T+ SLI+GLC  G  ++A  L  +++ S   KPNV+T
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
             A+I+G+C++  + +A +L   + EQGL P+  TY TLID +CK G  E A+ + N M 
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS 408

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
             G  P++ TYN ++ GL + G V+    ++ +   NG++    TYNIL+   CK    +
Sbjct: 409 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIR 468

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +A++L ++M K+  +   P+I +Y  LI  FC++ +++++     E +  G+IP   TY
Sbjct: 469 QALALFNKMLKIGIQ---PDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTY 524



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 176/329 (53%), Gaps = 7/329 (2%)

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +E NL +F  ++ GLCK G + +A +++E+M   G  P V T+  LIDG CKKG   K +
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330

Query: 242 KADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           +   +F  +V +    PN +T+  +I G+C+++ ++ A  +   M   G+     TY +L
Sbjct: 331 R---LFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C  G  + A  L + M + G  PN+ T NA++NG CK+  V++A  + +D  + GL
Sbjct: 388 IDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGL 447

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TYN L+  +CK+  +  A A+ N ML  G+ PD+ +Y  LIA   RE  ++    
Sbjct: 448 KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEM 507

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
              E V  G+     TY  ++   C++G    A+       ++      P+ +TY  +I 
Sbjct: 508 FFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH---RLSDHGCAPDSITYGAIIS 564

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           G C++ K ++A  L + ++EKGL+P + T
Sbjct: 565 GLCKQSKRDEARSLYDSMIEKGLVPCEVT 593



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 179/325 (55%), Gaps = 4/325 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+R  D GL+ ++++   ++  L K G  +    + +EM  +  + N+ +   +++GLCK
Sbjct: 263 FRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCK 322

Query: 199 AGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G   KA  + ++ ++S    P V+TY  +I GYC++    K+ +A+ +   M E G++P
Sbjct: 323 KGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED---KLNRAEMLLSRMKEQGLVP 379

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N  T+ TLIDG CK  N   A  +   M S G +  + TYN+++NGLC  G++ EA  + 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           ++   +GLKP+  T N L++  CK++ + +A  LF+ + + G+ P + +Y TLI  +C+E
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            RM+++       +  G++P   TY  +I G  REGN+       + L ++G     +TY
Sbjct: 500 NRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITY 559

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
             ++  LCK  K  +A SL D M +
Sbjct: 560 GAIISGLCKQSKRDEARSLYDSMIE 584



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%), Gaps = 4/313 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY-KEMKRRRIELNLDSFNFVL 193
            FE  +     G K +V +   L+  L K+G  E    ++ K ++    + N+ ++  ++
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMI 353

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +G C+  KLN+A  ++  MK  G+ P   TY  LIDG+CK G   + Y    +   M   
Sbjct: 354 SGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD---LMNLMSSE 410

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN  T+N +++G CK   +  A K+ E+   +G+     TYN L++  C    + +A
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +AL ++M+  G++P++ +   LI  FC++  ++++ + F++    G+ P+  TY ++I  
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICG 530

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YC+EG +  A    + + D G  PD  TY  +I+GL ++   +  R++ + ++  G+   
Sbjct: 531 YCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPC 590

Query: 434 LVTYNILVGALCK 446
            VT   L    CK
Sbjct: 591 EVTRITLAYEYCK 603



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 172/349 (49%), Gaps = 23/349 (6%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           + G+L +A +++ +M + G+ P   T N +I        +G +  A+ +F++M   G+ P
Sbjct: 147 EVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK---VTSEMGLVEYAELLFEEMCVRGVQP 203

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +++  ++  +CK  NI  A K    M   G      T+  +I+     G    A+   
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             ++  GL+PN++    +I G CK+  +++A  + +++  +G  P+V T+ +LID  CK+
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKK 323

Query: 378 GRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           G  E AF +   ++      P+V TY  +I+G  RE  +     +++ +   G+     T
Sbjct: 324 GWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  L+   CK G  ++A  L++    M  E   PN+ TYN ++ G C++G++++A  +L 
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMN---LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 497 ELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGH 529
           +  + GL P++ TY I+  E                M++ G  PDI  +
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSY 489



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 57/228 (25%)

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+L EAV +  EM   GL PN  T N +I    +  LVE A +LF+++  +G+ P  I+Y
Sbjct: 149 GRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISY 208

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             ++  YCK G + +A    + ML+RG + D +T+  +I+  S +G           LV+
Sbjct: 209 RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD 268

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+                                       PN++ +  +I+G C++G 
Sbjct: 269 MGLE--------------------------------------PNLINFTCMIEGLCKRGS 290

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           ++ A  +L                   EEM+ KG+ P++  H   I G
Sbjct: 291 IKQAFEML-------------------EEMVGKGWKPNVYTHTSLIDG 319



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           ++LM  + K          F +    G++  + S   L+    +E + ++ E  ++E  R
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
             I     ++  ++ G C+ G L  A      +   G +P  +TY  +I G CK+    K
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQ---SK 571

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
             +A +++  M+E G++P EVT  TL   +CK
Sbjct: 572 RDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 213/426 (50%), Gaps = 41/426 (9%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           +E F      G+  SV++ N L+ A   +G       V+ +M  RRI+ N+ ++  ++  
Sbjct: 158 WELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYA 217

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           LC+   +  A  +  +MK  G+ P + TYN L+  + K+  I     A   + D+++ G+
Sbjct: 218 LCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH---ALVFYYDLLKCGL 274

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING------------ 303
           +PN+V F TLIDG CK   I+ A  +F +M  + +A  V  YNSLI+G            
Sbjct: 275 VPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALA 334

Query: 304 -----------------------LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
                                  LC  G++  A    + M  SG+  N    N LI+ +C
Sbjct: 335 FFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYC 394

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   +++A V    +SE G+ P+V+TY++LID + K G ME A A+   M+ +GV P+V 
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 454

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           TY  LI G ++ G+++    +  E+   G+ +  +T ++LV  LC++ + + AV  + E 
Sbjct: 455 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 514

Query: 461 FKMEKEKKWPNI---VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
              +K +K P+I   VTY  LI G    G+  +A    + + + G++P++ TY +V   +
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 518 MEKGFI 523
              G++
Sbjct: 575 CMLGYV 580



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 170/325 (52%), Gaps = 6/325 (1%)

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
           L + N +L+GL KA  L +  ++ ++M   G+ P VVTYN LI+    +G + K ++   
Sbjct: 138 LPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWE--- 194

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           V+  MV   I PN VT+ T+I   C+++ I  A  +F EM   G+   + TYN+L++   
Sbjct: 195 VWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF 254

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
               +  A+    +++  GL PN V    LI+G CK   + +A+ +F D+    ++P+V 
Sbjct: 255 KRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVP 314

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            YN+LI    + G  ++A A    ++ + + PD  T + ++ GL   G ++     +  +
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVM 374

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
             +G+      YN+L+   CK G   +A+     M ++  E   PN+VTY+ LI G  + 
Sbjct: 375 QQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVE---PNVVTYSSLIDGHSKN 431

Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
           G++E A  +  E++ KG+ PN  TY
Sbjct: 432 GEMEIAMAIYTEMVAKGVEPNVVTY 456



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 162/318 (50%), Gaps = 19/318 (5%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF--NFVLNGLCKAGKL 202
           Y +  +V   N L+    + G  ++    ++E+ R+  EL  D F  + V+ GLC  G++
Sbjct: 307 YEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRK--ELRPDEFTCSIVVRGLCDGGQM 364

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A+  +E M+  G++     YN+LID YCK G + +   A      M E G+ PN VT+
Sbjct: 365 QVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE---ALVTCTRMSEVGVEPNVVTY 421

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           ++LIDG  K+  +  AM ++ EM + G+   VVTY +LI+G   +G +D A  L+ EM  
Sbjct: 422 SSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEE 481

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS---PSV---ITYNTLIDAYCK 376
            G+  N +T + L++G C++  V+ A     + S Q  S   PS+   +TY TLI     
Sbjct: 482 KGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYI 541

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           +G+  +A    + M D G++PD  TY  +I GL   G V     +  ++V  G++     
Sbjct: 542 DGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP---- 597

Query: 437 YNILVGALCKDGKSKKAV 454
                  +C D  S+++V
Sbjct: 598 --TKCAMVCPDIWSRESV 613



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 44/366 (12%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F    + G++ ++ + N L+ +  K    +     Y ++ +  +  N   F  +++GLCK
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCK 290

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           A ++ +A +I  DM    V+P V  YN LI G  + G      +A A F++++   + P+
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSG---YAQEALAFFQEIIRKELRPD 347

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
           E T + ++ G C    +  A +  E M   GIA     YN LI+  C  G LDEA+    
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M   G++PNVVT ++LI+G  K   +E A  ++ ++  +G+ P+V+TY  LI  + K G
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE-GVRNIM--------------- 422
            M+ AF ++  M ++G+  +  T + L+ GL RE  V+  VR IM               
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 423 ------------------NE-------LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
                             NE       + ++GM     TY +++  LC  G    A+ L 
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587

Query: 458 DEMFKM 463
            +M K+
Sbjct: 588 ADMVKV 593



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 143/280 (51%), Gaps = 6/280 (2%)

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A +VF  + E   LP     N ++DG  K   ++   ++F+EM   G+   VVTYN+LI
Sbjct: 124 EALSVFGRLRELPALP---ACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI 180

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           N     G + +A  + D+M+A  + PNVVT   +I   C++  +  A  LF ++ E G+ 
Sbjct: 181 NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMR 240

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P++ TYN L+ ++ K   ++ A      +L  G++P+   +  LI GL +   +   +NI
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNI 300

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             ++    +   +  YN L+    + G +++A++   E+ + E     P+  T +++++G
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELR---PDEFTCSIVVRG 357

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C  G+++ A   L  + + G+  N   Y ++ +E  + G
Sbjct: 358 LCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSG 397



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           R  + G++ +V++ + L+    K G+ E    +Y EM  + +E N+ ++  +++G  K G
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
            ++ A  + ++M+  G+    +T ++L+DG C++  +    +    +   K   +N  + 
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N VT+ TLI G   D   + A   F  M   G+     TY  +I GLC+ G +  A+ L 
Sbjct: 528 NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587

Query: 318 DEMMASGLKPN 328
            +M+  G+KP 
Sbjct: 588 ADMVKVGVKPT 598


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 191/346 (55%), Gaps = 3/346 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+I ++ L+       + H  F    +    G     +S   L+  L K G+      + 
Sbjct: 6   NTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 65

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           + +  + ++LN   +N V+ G+CK   +N A D+  +M S G+SP VVTY+ LI G+   
Sbjct: 66  QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV- 124

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +GK+  A  +F  ++   I P+  TFN L+DGFCKD  +     VF  M   GI   V
Sbjct: 125 --VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 182

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTYNSL++G  +  +++ A ++ + M   G+ P++ + N LINGFCK K V+KA  LF++
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 242

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  + + P+V+TYN+LID   K GR+  A  + + M DRGV P++ TYN +I  L +   
Sbjct: 243 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 302

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           V+    ++ +  + G++  + TY IL+  LCK G+ K A ++ +++
Sbjct: 303 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 195/341 (57%), Gaps = 6/341 (1%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  + N ++ GLC  G++++A    + + +LG     V+Y  LI G CK   +G+   A 
Sbjct: 6   NTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK---VGETRAAL 62

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            + + +    +  N V +NT+I G CKD++++ A  ++ EM S GI+  VVTY++LI+G 
Sbjct: 63  DLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 122

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
            V GKL +A+ L ++++   +KP+  T N L++GFCK + +++ + +F  + +QG+ P V
Sbjct: 123 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 182

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TYN+L+D Y     +  A ++ N+M   GV PD+ +YN LI G  +   V+   N+ NE
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 242

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +    +   +VTYN L+  L K G+   A+ L+D+M         PNI+TYN +I    +
Sbjct: 243 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM---HDRGVPPNILTYNSIIDALFK 299

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             +++ A  L+ +  ++G+ P+  TY I+ + + + G + D
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKD 340



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 38/301 (12%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC-------- 305
           G  PN +T NTLI G C    I  A    +++ + G     V+Y +LI+GLC        
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 306 ------VDGKL---------------------DEAVALRDEMMASGLKPNVVTSNALING 338
                 VDGKL                     ++A  L  EM++ G+ PNVVT +ALI+G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           F     ++ A  LF+ I  + + P   T+N L+D +CK+ +M++   +   M+ +G++PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V TYN L+ G      V   ++I N +   G+   + +YNIL+   CK  K  KA++L +
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           E   M  +   PN+VTYN LI G  + G++  A  L++++ ++G+ PN  TY  + + + 
Sbjct: 242 E---MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 519 E 519
           +
Sbjct: 299 K 299


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 206/379 (54%), Gaps = 9/379 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           D G +S+  +   ++  L K G     + Y+ K   R R    L +++ +++ LCK G L
Sbjct: 105 DMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGML 164

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
             A +    M   G+ P +V YN LI G C     G+  +A  +  +M+  GI+PN  TF
Sbjct: 165 CLALNFFSGMTCKGIQPDLVAYNSLIHGLCS---FGRWNEATTLLGNMMRKGIMPNVQTF 221

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N L+D FCK+  IS A  +   M   G+   VVTYNS+I+G C+  ++++AV + + M+ 
Sbjct: 222 NVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIH 281

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            GL PNVVT ++LI+G+CK + + KA  + D++   GL+  V+T++TLI  +CK GR E 
Sbjct: 282 KGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEA 341

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  +M +   LP++ T   ++ GL +        ++  ++    +   +VTYNI++ 
Sbjct: 342 AIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLD 401

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
            +C  GK   A     E+F     K    ++V Y  +IKG C++G L+DA  LL ++ E 
Sbjct: 402 GMCSFGKFNDA----RELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEEN 457

Query: 502 GLIPNQTTYQIVREEMMEK 520
           G  PN+ TY ++   ++++
Sbjct: 458 GCPPNEFTYNVLVRGLLQR 476



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 195/391 (49%), Gaps = 42/391 (10%)

Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           V   M +  +E  + +F  ++NGLC  G +  A+   + ++ +G      T+  +I+G C
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 233 K----KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           K     G I  + K +        N      + ++T++D  CKD  +  A+  F  M   
Sbjct: 124 KVGDTAGAISYLEKIEG------RNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCK 177

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   +V YNSLI+GLC  G+ +EA  L   MM  G+ PNV T N L++ FCK+  + +A
Sbjct: 178 GIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRA 237

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           + +   +   G+ P V+TYN++I  +C   +M DA  +   M+ +G+LP+V TY+ LI G
Sbjct: 238 KTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHG 297

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL------------ 456
             +  N+     +++E+VNNG+   +VT++ L+G  CK G+ + A+ L            
Sbjct: 298 WCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPN 357

Query: 457 -------LDEMF-------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
                  LD +F             KMEK     NIVTYN+++ G C  GK  DA  L +
Sbjct: 358 LQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFS 417

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            L  KG+  +   Y  + + + ++G + D E
Sbjct: 418 CLPSKGIQIDVVAYTTMIKGLCKEGLLDDAE 448



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 199/363 (54%), Gaps = 6/363 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ + ++ +L K+G        +  M  + I+ +L ++N +++GLC  G+ N+A+ ++ 
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M   G+ P V T+N+L+D +CK+G   K+ +A  +   MV  G+ P+ VT+N++I G C
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEG---KISRAKTIMCFMVHVGVEPDVVTYNSVISGHC 264

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
               ++ A+KVFE M   G+   VVTY+SLI+G C    +++A+ + DEM+ +GL  +VV
Sbjct: 265 LLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVV 324

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T + LI GFCK    E A  LF  + E    P++ T   ++D   K     +A ++   M
Sbjct: 325 TWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKM 384

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
               +  ++ TYN ++ G+   G     R + + L + G++  +V Y  ++  LCK+G  
Sbjct: 385 EKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLL 444

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  LL    KME+    PN  TYNVL++G  Q+  +  +   L  +  KGL  + TT 
Sbjct: 445 DDAEDLL---MKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTT 501

Query: 511 QIV 513
           +++
Sbjct: 502 ELL 504



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 186/341 (54%), Gaps = 17/341 (4%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A ST  DSLC++     ML LA        L F  F      G++  +++ N L+  L  
Sbjct: 150 AYSTIMDSLCKDG----MLCLA--------LNF--FSGMTCKGIQPDLVAYNSLIHGLCS 195

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
            G++ +   +   M R+ I  N+ +FN +++  CK GK+++A  IM  M  +GV P VVT
Sbjct: 196 FGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVT 255

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN +I G+C    + +M  A  VF+ M+  G+LPN VT+++LI G+CK  NI+ A+ V +
Sbjct: 256 YNSVISGHCL---LSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLD 312

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM ++G+   VVT+++LI G C  G+ + A+ L   M      PN+ T   +++G  K +
Sbjct: 313 EMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQ 372

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
              +A  LF  + +  L  +++TYN ++D  C  G+  DA  + + +  +G+  DV  Y 
Sbjct: 373 FHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYT 432

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +I GL +EG ++   +++ ++  NG      TYN+LV  L
Sbjct: 433 TMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 4/270 (1%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A ++ K     G+ P+  T   +I+  C  ++      V   M   G+   VVT+ +LIN
Sbjct: 26  AISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLIN 85

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           GLC +G +  A    D +   G + N  T   +ING CK      A    + I  +    
Sbjct: 86  GLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGF 145

Query: 363 S-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             +I Y+T++D+ CK+G +  A    + M  +G+ PD+  YN LI GL   G       +
Sbjct: 146 DLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTL 205

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  ++  G+   + T+N+LV   CK+GK  +A +++  M  +  E   P++VTYN +I G
Sbjct: 206 LGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVE---PDVVTYNSVISG 262

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            C   ++ DA  +   ++ KGL+PN  TY 
Sbjct: 263 HCLLSQMNDAVKVFELMIHKGLLPNVVTYS 292



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 18/303 (5%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCS---DSLCRNSIIIDMLMLAYVKNMKPH 133
           P +++F   +  F K GK +   TI   +       D +  NS+I    +L+ + +    
Sbjct: 216 PNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMND---- 271

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
              + F+     GL  +V++ + L+    K        +V  EM    + L++ +++ ++
Sbjct: 272 -AVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLI 330

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMV 251
            G CKAG+   A ++   M      P + T  I++DG  K       + ++A+  F+ M 
Sbjct: 331 GGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKC-----QFHSEAISLFRKME 385

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +  +  N VT+N ++DG C     + A ++F  + S GI   VV Y ++I GLC +G LD
Sbjct: 386 KMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLD 445

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  L  +M  +G  PN  T N L+ G  ++  + ++      +  +GLS    T   LI
Sbjct: 446 DAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLI 505

Query: 372 DAY 374
             +
Sbjct: 506 SYF 508



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 33/216 (15%)

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K K    A  L       G+ P V T   +I+  C        F++  +M   GV P V 
Sbjct: 19  KMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVV 78

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS----- 455
           T+  LI GL  EGNV       + L + G  +   T+  ++  LCK G +  A+S     
Sbjct: 79  TFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKI 138

Query: 456 ---------------LLDEMFK-------------MEKEKKWPNIVTYNVLIKGFCQKGK 487
                          ++D + K             M  +   P++V YN LI G C  G+
Sbjct: 139 EGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGR 198

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             +A  LL  ++ KG++PN  T+ ++ +   ++G I
Sbjct: 199 WNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G++  + T  I++  LC    +    S+L  MFK+  E   P +VT+  LI G C +G +
Sbjct: 37  GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVE---PTVVTFATLINGLCAEGNV 93

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG-------FIPDIEG 528
             A    + L + G   N  T+  +   + + G       ++  IEG
Sbjct: 94  GAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEG 140


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  +  N      ++ + VK  +  L  + F +    G+          +RA  +    +
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 238

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +   M+   ++ +   +N ++ GLCK  ++ +A ++   M ++GV+   VTY  L+
Sbjct: 239 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 298

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G+C+   + ++  A  +  DM+  G +P+E   + +ID   K E +  A  +  ++G  
Sbjct: 299 YGFCR---MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 355

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   V  YN+LI+ LC + + D+A  L  EM   GL+PN VT   LI+  CK+ ++E A
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             LFD + ++G+  +V  YN+LI+ YCK+G ++ A  + + M+  G+ P  ++Y+ LIAG
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R G++     +  E+   G+     T+  L+   CKD K  +A  L D   KM     
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD---KMIDSNV 532

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            PN VT+NV+I+G+C  G +  A  L ++++E GL P+  TY+
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 575



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 9/400 (2%)

Query: 131 KPHLGFEAFKRA---GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  L  EAF  A   GD G+  +V + N L+  L K  +F+D + ++KEM  R +E N  
Sbjct: 338 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 397

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  +++ LCK G +  A  + + M+  G+   V  YN LI+GYCK+G + +   A  + 
Sbjct: 398 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---ARGLL 454

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             MV+ G+ P   +++ LI G C++ ++S+ M++  EM   GIA    T+ +LING C D
Sbjct: 455 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKD 514

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            K+DEA  L D+M+ S + PN VT N +I G+C    + KA  L+D + E GL P   TY
Sbjct: 515 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 574

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            +LI   C    +  A      + +   + +  +   L+ G  REG      ++ +E+  
Sbjct: 575 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 634

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  LV++ I+V A  K    +K+  L  EM   +++   P+ + Y  +I    ++  
Sbjct: 635 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEEN 691

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +  A    ++++  G  PN  T+ ++   + + G++   E
Sbjct: 692 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAE 731



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 102/525 (19%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K G    V  +F A +   D LC+N    D   L              FK     GL+ +
Sbjct: 351 KLGDLGMVPNVF-AYNALIDKLCKNERFDDADRL--------------FKEMAGRGLEPN 395

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            ++   L+ AL K G  ED   ++ +M+ + I++ +  +N ++NG CK G L++A  ++ 
Sbjct: 396 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 455

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   G++P   +Y+ LI G C+ G +    +   + ++M E GI  N  TF  LI+GFC
Sbjct: 456 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCME---LHREMAERGIAWNNYTFTALINGFC 512

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           KD+ +  A ++F++M    +    VT+N +I G C+ G + +A  L D+M+  GLKP+  
Sbjct: 513 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 572

Query: 331 TSNALINGFCKKKLVEKARV-----------------------------------LFDDI 355
           T  +LI+G C    V KA                                     L+D++
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           + +G+   ++++  ++ A  K+   E +  +   M ++GV PD   Y C+I  LS+E N+
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK------------- 462
               N  +++V +G     VT+ +L+  LCK G    A  L  EM               
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 752

Query: 463 ---------MEKEK---------KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                    MEK K            +IV++N+LIKG C+ GK+++A  L++++ E G  
Sbjct: 753 LDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFS 812

Query: 505 PNQTTYQ-IVRE---------------EMMEKGFIPDIEGHMYNI 533
           P+  +Y  I+ E               EM+ KG  PD+    YNI
Sbjct: 813 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA--YNI 855



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 22/433 (5%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S+ +  +++  ++LM    KNM+     E      + G+ +  ++   L+    +  + E
Sbjct: 249 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 308

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M R     +  + +F+++ L K   + +A  +   +  LG+ P V  YN LI
Sbjct: 309 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 368

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK     +   AD +FK+M   G+ PNEVT+  LI   CK   I  A+ +F++M   
Sbjct: 369 DKLCKNE---RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           GI   V  YNSLING C  G LD A  L   M+  GL P   + + LI G C+   +   
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 485

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             L  +++E+G++ +  T+  LI+ +CK+ +M++A  + + M+D  V+P+  T+N +I G
Sbjct: 486 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 545

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
               GN+     + +++V  G++    TY  L+  LC      KA   + +   +E    
Sbjct: 546 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD---LENSYA 602

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR-------------- 514
             N  +   L+ GF ++G+  +   L +E+  +G+  +  ++ I+               
Sbjct: 603 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 662

Query: 515 --EEMMEKGFIPD 525
              EM E+G  PD
Sbjct: 663 LFREMKEQGVKPD 675



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 186/407 (45%), Gaps = 36/407 (8%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E  +   + G+  +  +   L+    K+ K ++   ++ +M    +  N  +FN ++ G 
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C  G + KA  + + M  +G+ P   TY  LI G C   G+                   
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+  +   ++ +M   G+  + V+F  ++    K  +   +  +F E
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M   G+    + Y  +I+ L  +  + +A+   D+M+  G  PN VT   LIN  CK   
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +  A +L  ++    + P+  TYN  +D +  EG ME A  + ++ML +G L  + ++N 
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 785

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL + G ++   ++M+++  +G     ++Y+ ++  LCK G   KA  L +EM  + 
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM--LY 843

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           K  K P++V YN+ I+     G+ + A G+   ++  G+ PN  TY+
Sbjct: 844 KGLK-PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYR 889



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 4/293 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            S   LL    +EG+F +  +++ EM  R ++L+L SF  ++    K     K+  +  +
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           MK  GV P  + Y  +ID   K+     M +A   +  MV +G  PN VT   LI+  CK
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEE---NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 723

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              + +A  + +EM +  +     TYN  ++    +G +++A  L   M+   L  ++V+
Sbjct: 724 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVS 782

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI G CK   +++A  L   I+E G SP  I+Y+T+I   CK G +  AF + N ML
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +G+ PDV  YN  I   +  G  +    I   ++ +G++    TY  L+  +
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 192/400 (48%), Gaps = 13/400 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY--VKNMKPHLGFEAFKR 141
           + ++ F K+ K    + +F  +     ++  N +  ++++  Y  V N++    F+ + +
Sbjct: 506 ALINGFCKDKKMDEAARLFDKM--IDSNVIPNEVTFNVMIEGYCLVGNIRK--AFQLYDQ 561

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
             + GLK    +   L+  L              +++     LN  S   +L G  + G+
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
             +   + ++M   GV   +V++ I++    K+       K+  +F++M E G+ P+++ 
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH---DKEKSCVLFREMKEQGVKPDDIF 678

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +  +ID   K+EN+  A+  +++M   G +   VT+  LIN LC  G L  A  L  EM+
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
           A  + PN  T N  ++ F  +  +EKA+ L   +  QG   S++++N LI   CK G+++
Sbjct: 739 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ 797

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  + + + + G  PD  +Y+ +I  L + G++     + NE++  G++  +V YNI +
Sbjct: 798 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
                 G+S KA+ +   M +   +  W    TY  L+ G
Sbjct: 858 RWCNVHGESDKALGIYTNMIRSGVQPNWD---TYRALLSG 894



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 38/296 (12%)

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           + +GI  N+ T + ++    K    + A  +F++M   G+      Y + I   C    L
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           D A  L   M + G+K + V  N L+ G CK   V++A  + + +   G++   +TY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 371 IDAYC-----------------------------------KEGRMEDAFAMRNSMLDRGV 395
           +  +C                                   K+  +E+AF++   + D G+
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +P+V  YN LI  L +    +    +  E+   G+    VTY IL+ ALCK G  + A+ 
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           L D   KM  +     +  YN LI G+C++G L+ A GLL+ ++++GL P   +Y 
Sbjct: 418 LFD---KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 3/239 (1%)

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S GI     T + ++  L    +   A  L D+M+ SG+  +     A I  +C+ + ++
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 238

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR L   +  +G+  S + YN L+   CK  R+++A  ++N M++ GV  D  TY  L+
Sbjct: 239 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 298

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
            G  R   +E    I ++++  G        + ++  L K    ++A SL     K+   
Sbjct: 299 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL---ACKLGDL 355

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
              PN+  YN LI   C+  + +DA+ L  E+  +GL PN+ TY I+   + ++G I D
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 204/398 (51%), Gaps = 49/398 (12%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E FK     G++  + S + LL AL   G+  +   ++  M       ++ ++N +++
Sbjct: 160 AMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMD 216

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G CK G+  +A  +M+++   G  P V TY+I+I+ YCK   + K+ +A  VF  M+E+ 
Sbjct: 217 GYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCK---LDKVEEAWEVFMKMIESN 273

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD-GKLDEA 313
            +PN VTFNTLI GFCK   +  A+K+F EM   G  A +VTYN+LI+ LC   G +  A
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           V L +++  +GL P +VT N+LI GFC  + + +A   FD++ E   +P+VITY+ LID 
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDG 392

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV--------------- 418
            CK  RM++A      M   G  P V TY  LI G  + G ++                 
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 419 RNIMNELV---------NNGMR-----------AGLVTYNILVGALCKDGKSKKAVSLLD 458
             I N L+         N+G+R             ++TYN L+  LC   + + A  L D
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
            M         PN+ T+N LI+G C + K+E+A  +L+
Sbjct: 513 GM------ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 196/361 (54%), Gaps = 15/361 (4%)

Query: 155 NQLLRALVKEGK----FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           N +L+ L  E K     E     +KEMK   +E +L+S++ +L+ L  +G++ +A  +  
Sbjct: 141 NLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS 200

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M     SP ++TYN+L+DGYCK   IG+ Y+A ++ K++++ G  PN  T++ +I+ +C
Sbjct: 201 AMT---CSPDIMTYNVLMDGYCK---IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYC 254

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K + +  A +VF +M         VT+N+LI G C  G L++A+ L  EM   G K  +V
Sbjct: 255 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIV 314

Query: 331 TSNALINGFCKKKL-VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           T N LI+  CKK+  V  A  LF+ +   GL+P+++TYN+LI  +C   R+ +A    + 
Sbjct: 315 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE 374

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  +   P+V TY+ LI GL +   ++     + ++  +G    +VTY  L+   CK G+
Sbjct: 375 MEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGE 433

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            K A+   +   KM+     PN V +N LI G C+  +  D   LL  +  +G  P+  T
Sbjct: 434 LKSALLFFE---KMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVIT 490

Query: 510 Y 510
           Y
Sbjct: 491 Y 491



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 204/422 (48%), Gaps = 51/422 (12%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL  LV   K +    ++KE+       N  ++N ++ G CK G++++A  +  DMKS
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+ P   T N L+ G C+   IG+M  A  +F++M     LP   + N L+ GF     
Sbjct: 61  SGLLPNASTMNTLLLGLCE---IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK----LDEAVALRDEMMASGLK---- 326
           +  A+   ++M     +    TYN ++ GLC + K    L++A+    EM ASG++    
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 327 ----------------------------PNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
                                       P+++T N L++G+CK     +A+ L  +I + 
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P+V TY+ +I+ YCK  ++E+A+ +   M++   +P+  T+N LIAG  + G +E  
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKD-GKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
             +  E+   G +A +VTYN L+ +LCK  G    AV L +   K+E     P IVTYN 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN---KLEGAGLTPTIVTYNS 354

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------VREEMMEKGFIPDIEGHM 530
           LI+GFC   +L +A    +E +E    PN  TY I       VR        + D++ H 
Sbjct: 355 LIQGFCDARRLSEAMQYFDE-MEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413

Query: 531 YN 532
           Y 
Sbjct: 414 YT 415



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 225/456 (49%), Gaps = 24/456 (5%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           RL   ++     P   ++   +  F K G+     ++F  +   S  L  N+  ++ L+L
Sbjct: 18  RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK--SSGLLPNASTMNTLLL 75

Query: 125 AYVKNMKPHLGFEAFK--RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
              +  +     + F+  +AG + L +S  S N LLR     G+  D     ++M++   
Sbjct: 76  GLCEIGQMSSALKLFREMQAGPF-LPTSA-SHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 183 ELNLDSFNFVLNGLC----KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
            +   ++N VL GLC     A +L +A +  ++MK+ GV P + +Y+IL+      G   
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSG--- 190

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           +M +A A+F  M  +   P+ +T+N L+DG+CK      A  + +E+   G    V TY+
Sbjct: 191 RMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 247

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
            +IN  C   K++EA  +  +M+ S   PN VT N LI GFCK  ++E A  LF ++ + 
Sbjct: 248 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 307

Query: 359 GLSPSVITYNTLIDAYCKE-GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           G   +++TYNTLID+ CK+ G +  A  + N +   G+ P + TYN LI G      +  
Sbjct: 308 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSE 367

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
                +E+        ++TY+IL+  LCK  + K+A   L++M   +     P +VTY  
Sbjct: 368 AMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDM---KAHGYTPTVVTYGG 423

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           LI GFC+ G+L+ A     ++   G  PN   +  +
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTL 459



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 187/416 (44%), Gaps = 50/416 (12%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTI 101
           L+L+  CW  K   +++ L         +  +   P + S+   L     +G+      +
Sbjct: 142 LVLKGLCWENK---SANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL 198

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
           F A+ TCS  +   ++++D     Y K  + +      K     G + +V + + ++   
Sbjct: 199 FSAM-TCSPDIMTYNVLMD----GYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K  K E+   V+ +M       N  +FN ++ G CKAG L  A  +  +M+ +G    +
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           VTYN LID  CKK G   +Y A  +F  +   G+ P  VT+N+LI GFC    +S AM+ 
Sbjct: 314 VTYNTLIDSLCKKRG--GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQY 371

Query: 282 FEEM----------------------------------GSHGIAAGVVTYNSLINGLCVD 307
           F+EM                                   +HG    VVTY  LING C  
Sbjct: 372 FDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G+L  A+   ++M  +G  PN V  N LI+G CK +       L   +  +G  P VITY
Sbjct: 432 GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITY 491

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           N LI   C   R+EDA  + + M      P+V+T+N LI GL  +  VE  RNI++
Sbjct: 492 NCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 3/135 (2%)

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N L++GL      +    +  E++         TYN+L+   CK G+  +AVS+  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-- 58

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
            +     PN  T N L+ G C+ G++  A  L  E+     +P   ++ I+       G 
Sbjct: 59  -KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117

Query: 523 IPDIEGHMYNISGTS 537
           + D   H+ ++  +S
Sbjct: 118 VRDALAHLQDMRKSS 132


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 224/423 (52%), Gaps = 17/423 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + +  + ++G+      +F A+  + C  +L   + IID      V ++K  L  + F  
Sbjct: 240 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGV-DLKQAL--DIFDE 296

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G++   ++ N L+    + G +ED + V+ EM+RR IE ++ +FN +++ +CK G+
Sbjct: 297 MQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQ 356

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +  A+ IM  M+   +SP VVTY+ +IDGY   G +G   +A +++ DM E+G+ P+ V+
Sbjct: 357 MELAASIMTTMRGKNISPNVVTYSTMIDGY---GKLGCFEEAISLYHDMKESGVRPDRVS 413

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NTLID + K      A+   ++M   G+ A VVTYN+LI+     GK  +A  L D+M 
Sbjct: 414 YNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMK 473

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             GL PNV+T +ALI+ + K  + +    +F +    GL P V+ Y++LID+ CK G +E
Sbjct: 474 GEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVE 533

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  +   M   G+ P++ TYN LI    R G  + +  +   + N+  + G  +  ++ 
Sbjct: 534 DAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVR 593

Query: 442 GALCKDGKSK------KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
                   +        AVS+  EM +   +   PN+VT++ ++    +   L++A+ LL
Sbjct: 594 KPPPSQQNASDHTGVLAAVSVFHEMQQFGLK---PNVVTFSAILNACSRCASLQEASVLL 650

Query: 496 NEL 498
            ++
Sbjct: 651 EQM 653



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 209/390 (53%), Gaps = 15/390 (3%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           K  +  + F RA   G  ++V + + ++ A  + G+  +   V++ MK+   + NL ++N
Sbjct: 215 KVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYN 274

Query: 191 FVLNGLCKAG-KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
            +++   K G  L +A DI ++M+  GV P  +T+N LI   C +GG+ +   +  VF +
Sbjct: 275 TIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLI-AVCSRGGLWE--DSQRVFAE 331

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M   GI  +  TFNTLID  CK   +  A  +   M    I+  VVTY+++I+G    G 
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +EA++L  +M  SG++P+ V+ N LI+ + K    + A +   D+   GL   V+TYN 
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNA 451

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LIDAY K+G+ +DA  + + M   G++P+V TY+ LI   S+ G  + V N+  E    G
Sbjct: 452 LIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAG 511

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  +V Y+ L+ + CK G  + AV LL EM +   +   PNIVTYN LI  + + G+ +
Sbjct: 512 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ---PNIVTYNSLIDAYGRYGQAD 568

Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMME 519
               +      K  +PN  + Q + E  ME
Sbjct: 569 KLEAV------KANMPN--SVQKIGERSME 590



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 192/354 (54%), Gaps = 5/354 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++  L + GK E    V+   ++     N+ +++ +++   ++G+  +A  + + MK  G
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P ++TYN +ID  C KGG+  + +A  +F +M + G+ P+ +TFN+LI    +     
Sbjct: 266 CKPNLITYNTIIDA-CGKGGV-DLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + +VF EM   GI   + T+N+LI+ +C  G+++ A ++   M    + PNVVT + +I
Sbjct: 324 DSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMI 383

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+ K    E+A  L+ D+ E G+ P  ++YNTLID Y K GR +DA      M   G+ 
Sbjct: 384 DGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLK 443

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            DV TYN LI    ++G  +    + +++   G+   ++TY+ L+ +  K G  +   ++
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNV 503

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             E FK    K  P++V Y+ LI   C+ G +EDA  LL E+ + G+ PN  TY
Sbjct: 504 FTE-FKRAGLK--PDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTY 554



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 157 LLRALVKEGKFEDV----EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           LLR L   G++E      E++ +++  R     L S   +++ L + GK+  A D+    
Sbjct: 169 LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASI--MISTLGRLGKVEIALDVFNRA 226

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           +  G    V  Y+ ++  Y   G  G+  +A  VF+ M + G  PN +T+NT+ID   K 
Sbjct: 227 QKAGFGNNVYAYSAMVSAY---GRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKG 283

Query: 273 E-NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             ++  A+ +F+EM   G+    +T+NSLI      G  +++  +  EM   G++ ++ T
Sbjct: 284 GVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFT 343

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI+  CK   +E A  +   +  + +SP+V+TY+T+ID Y K G  E+A ++ + M 
Sbjct: 344 FNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           + GV PD  +YN LI   ++ G  +       ++   G++A +VTYN L+ A  K GK K
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYK 463

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
            A  L D   KM+ E   PN++TY+ LI  + + G  +D + +  E    GL P+   Y 
Sbjct: 464 DAACLFD---KMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYS 520

Query: 512 ----------------IVREEMMEKGFIPDI 526
                           ++ +EM + G  P+I
Sbjct: 521 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNI 551



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 55/369 (14%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           +  +V++ + ++    K G FE+   +Y +MK   +  +  S+N +++   K G+ + A 
Sbjct: 372 ISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 431

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
              +DM+ +G+   VVTYN LID Y K+G   K   A  +F  M   G++PN +T++ LI
Sbjct: 432 IACKDMERVGLKADVVTYNALIDAYGKQG---KYKDAACLFDKMKGEGLVPNVLTYSALI 488

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           D + K         VF E    G+   VV Y+SLI+  C  G +++AV L  EM  +G++
Sbjct: 489 DSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 548

Query: 327 PNVVTSNALINGFCK------------------KKLVEK--------------------- 347
           PN+VT N+LI+ + +                  +K+ E+                     
Sbjct: 549 PNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGV 608

Query: 348 --ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY--- 402
             A  +F ++ + GL P+V+T++ +++A  +   +++A    + +L++    D   Y   
Sbjct: 609 LAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEA----SVLLEQMRFFDGWVYGIA 664

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL  +  VE  R + +E+       G   YN L   L   G+ + A  ++     
Sbjct: 665 HGLLMGLREQVWVEAQR-LFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVV---VA 720

Query: 463 MEKEKKWPN 471
            ++ + W N
Sbjct: 721 AKRRQVWEN 729



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 23/311 (7%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSD----SLCRNSIIIDMLMLAYVKNMKPHLGFEAF 139
           + + ++ K G+F        AL  C D     L  + +  + L+ AY K  K       F
Sbjct: 416 TLIDIYAKLGRFDD------ALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLF 469

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
            +    GL  +VL+ + L+ +  K G  +DV  V+ E KR  ++ ++  ++ +++  CK 
Sbjct: 470 DKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKC 529

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G +  A  ++++M   G+ P +VTYN LID Y   G  G+  K +AV  +M  +     E
Sbjct: 530 GLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY---GRYGQADKLEAVKANMPNSVQKIGE 586

Query: 260 VTFNTLIDGFCKDENIS------AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            +   +       +N S      AA+ VF EM   G+   VVT+++++N       L EA
Sbjct: 587 RSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEA 646

Query: 314 VALRDEM-MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             L ++M    G    +  ++ L+ G  ++  VE  R LFD+IS    +     YN L D
Sbjct: 647 SVLLEQMRFFDGWVYGI--AHGLLMGLREQVWVEAQR-LFDEISRMDYATGAAFYNALTD 703

Query: 373 AYCKEGRMEDA 383
                G+ + A
Sbjct: 704 VLWHFGQRQGA 714


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 187/367 (50%), Gaps = 7/367 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL   V + N +LR  ++ G F     V+  M R  +  +  SF  ++   C+ GK+ +
Sbjct: 140 HGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEE 199

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++  M   G S    T  +++   C+K   G+       F+ M+E G  PN V +  
Sbjct: 200 VDALLAAMWRYGFSLDNATCTVVVRSLCEK---GRFKDVSEFFRRMLETGTPPNVVNYTA 256

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-AS 323
            IDG CK   +  A  V EEM   G+   V T+ +LI+GLC  G  + A  L  +++ +S
Sbjct: 257 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 316

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KPNV T   +I G+C++  + +A +L   + EQGL P+  TY TLI  +CK G  + A
Sbjct: 317 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRA 376

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + N M   G LP++ TYN +I G  ++G ++    ++    + G++   +TY IL+  
Sbjct: 377 FELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITE 436

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G    A+ L D   +M +    P+I  Y  LI  +CQ+ ++E++    ++ L  GL
Sbjct: 437 HCKQGHITYALDLFD---RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493

Query: 504 IPNQTTY 510
           +P + TY
Sbjct: 494 LPTKQTY 500



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 184/387 (47%), Gaps = 36/387 (9%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG      +C  ++R+L ++G+F+DV   ++ M       N+ ++   ++GLCK   + +
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 269

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------------------- 237
           A  ++E+M   G+ P V T+  LIDG CK G                             
Sbjct: 270 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 329

Query: 238 ------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                 GK+ +A+ +   MVE G+ PN  T+ TLI G CK  +   A ++  +M   G  
Sbjct: 330 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 389

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + TYN++I+G C  GK+ EA  +     + GLK + +T   LI   CK+  +  A  L
Sbjct: 390 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 449

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           FD + E G  P +  Y +LI  YC++ +ME++    +  L  G+LP   TY  +IAG  +
Sbjct: 450 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 509

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G       +   +V NG  A  +TY  L+  LCK+ + ++A +L + M     ++  P 
Sbjct: 510 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGML---DKRLVPC 566

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNEL 498
            VT   L   +C++ K   A  +L+ L
Sbjct: 567 EVTRVTLTFEYCRREKTSIAVSVLDRL 593



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 27/356 (7%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYKADAVFKDMVENGI 255
           +AG+L +A+D++ +M+S G+   V T N ++     + G+  G    A  VF  M   G+
Sbjct: 123 EAGRLPEAADMVLEMRSHGLPLCVETANWVL-----RVGLETGSFVYARKVFDGMTRAGV 177

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+E +F  L+   C++  +     +   M  +G +    T   ++  LC  G+  +   
Sbjct: 178 CPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 237

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
               M+ +G  PNVV   A I+G CK++ V++A  + +++  +GL P+V T+ TLID  C
Sbjct: 238 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 297

Query: 376 KEGRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           K G  E AF +   ++      P+V TY  +I G  REG +     ++  +V  G++   
Sbjct: 298 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 357

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L+G  CK G   +A  L++   KM++E   PNI TYN +I GFC+KGK+++A  +
Sbjct: 358 NTYTTLIGGHCKGGSFDRAFELMN---KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 414

Query: 495 LNELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNIS 534
           L     +GL  ++ TY I+  E                M+E G  PDIE +   IS
Sbjct: 415 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 470



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 18/424 (4%)

Query: 91  KNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           + G+F  VS  F  +    T  + +   + I  +    YVK       F   +     GL
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ-----AFHVLEEMVGRGL 282

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           K +V +   L+  L K G  E    ++ K +K    + N+ ++  ++ G C+ GKL +A 
Sbjct: 283 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 342

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++  M   G+ P   TY  LI G+CK G   + ++   +   M + G LPN  T+N +I
Sbjct: 343 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE---LMNKMKQEGFLPNIYTYNAVI 399

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK   I  A KV     S G+    +TY  LI   C  G +  A+ L D M+ +G  
Sbjct: 400 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 459

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++    +LI+ +C+++ +E+++  FD     GL P+  TY ++I  YCK GR   A  +
Sbjct: 460 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 519

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+  G   D  TY  LI+GL +E  +E  + +   +++  +    VT   L    C+
Sbjct: 520 FERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCR 579

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             K+  AVS+LD + K ++      + T +V+++     G ++ A+  L ++L++    +
Sbjct: 580 REKTSIAVSVLDRLDKRQQ------VHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVD 633

Query: 507 QTTY 510
             TY
Sbjct: 634 HATY 637



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 23/301 (7%)

Query: 250 MVENGILP--NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            V  G LP  +EV    ++  F +   +  A  +  EM SHG+   V T N ++      
Sbjct: 101 FVARGSLPMAHEV-MRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLET 159

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G    A  + D M  +G+ P+  +  AL+   C++  VE+   L   +   G S    T 
Sbjct: 160 GSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC 219

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             ++ + C++GR +D       ML+ G  P+V  Y   I GL +   V+   +++ E+V 
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G++  + T+  L+  LCK G +++A  L  ++ K    K  PN+ TY V+I G+C++GK
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGK 337

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMY 531
           L  A  LL  ++E+GL PN  TY                  +  +M ++GF+P+I  + Y
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNI--YTY 395

Query: 532 N 532
           N
Sbjct: 396 N 396


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 216/408 (52%), Gaps = 11/408 (2%)

Query: 120 DMLMLAYVKNMKPHLG-----FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           D++ L  + N   HLG     F         G    V++   L++ L   G+ +     +
Sbjct: 103 DLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFH 162

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            ++     +L+  S+  ++NGLCK G+   A  +M +++   + P VV YNI+ID  CK 
Sbjct: 163 DDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKN 222

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             +G+   A  ++ +M    I PN VT+ TLI GFC    +  A+ +  EM    I   V
Sbjct: 223 KLVGE---ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDV 279

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            T++ LI+ L  +GK+  A  +   MM + +KP+VVT N+L++G+     V+ A+ +F+ 
Sbjct: 280 YTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNS 339

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +++ G++P V +Y  +ID  CK   +++A ++   M  + V+P+  T+N LI GL + G 
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +  V ++++++ +    A ++TY+ L+ ALCK+    +A++L  +M   E +   P++ T
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQ---PDMYT 456

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           Y +LI G C+ G+L+ A  +   LL KG   +  TY ++     + G 
Sbjct: 457 YTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGL 504



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 195/359 (54%), Gaps = 6/359 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            +K  V+  N ++ +L K     +   +Y EM  ++I  N+ ++  ++ G C  G L +A
Sbjct: 204 SIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEA 263

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +MK   ++P V T++ILID   K+G   KM  A  V   M++  + P+ VT+N+L
Sbjct: 264 VALLNEMKLKNINPDVYTFSILIDALGKEG---KMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DG+     +  A  VF  M   G+  GV +Y  +I+GLC    +DEA++L +EM    +
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN +T N+LI+G CK   +     L D + ++     VITY++LIDA CK   ++ A A
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M+ + + PD+ TY  LI GL + G ++  + +   L+  G    + TY +++   C
Sbjct: 441 LFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           K G   +A++LL    KME     PN +T++++I    +K + + A  LL E++ +GL+
Sbjct: 501 KAGLFDEALALLS---KMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 209/423 (49%), Gaps = 30/423 (7%)

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           ++  HL F+        G+ S +++ N L+      G+      V   + +R    ++ +
Sbjct: 90  SLSKHLDFK--------GITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVIT 141

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
              ++ GLC  G++ KA    +D+ +L      ++Y  LI+G CK   IG+   A  + +
Sbjct: 142 LTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK---IGETKAAIQLMR 198

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           ++ E  I P+ V +N +ID  CK++ +  A  ++ EM +  I   VVTY +LI G C+ G
Sbjct: 199 NLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMG 258

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
            L EAVAL +EM    + P+V T + LI+   K+  ++ A+++   + +  + P V+TYN
Sbjct: 259 CLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYN 318

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           +L+D Y     ++ A  + NSM   GV P V +Y  +I GL +   V+   ++  E+ + 
Sbjct: 319 SLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHK 378

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
            +    +T+N L+  LCK G+      L+D   KM    +  +++TY+ LI   C+   L
Sbjct: 379 NVIPNTITFNSLIDGLCKSGRIAYVWDLVD---KMRDRSQLADVITYSSLIDALCKNCHL 435

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYN 532
           + A  L  +++ + + P+  TY I                V + ++ KG+  DI  +   
Sbjct: 436 DQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVM 495

Query: 533 ISG 535
           ISG
Sbjct: 496 ISG 498



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 19/309 (6%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+F  M+     P    FN ++    K +    A+ + + +   GI + +VT N LIN
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
             C  G++  + ++   ++  G  P+V+T   LI G C +  V+KA    DD+       
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
             I+Y TLI+  CK G  + A  +  ++ +R + PDV  YN +I  L +   V    N+ 
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E+    +   +VTY  L+   C  G   +AV+LL+E   M+ +   P++ T+++LI   
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNE---MKLKNINPDVYTFSILIDAL 289

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
            ++GK++ A  +L  +++  + P+  TY                + V   M + G  P +
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGV 349

Query: 527 EGHMYNISG 535
           + +   I G
Sbjct: 350 QSYTIMIDG 358



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 32/243 (13%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           ++AVAL + M+     P     N +++   K +    A  L   +  +G++  ++T N L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I+ +C  G++  +F++  ++L RG  PDV T   LI GL   G V+      +++V    
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLL-------------------DEMFK--------- 462
           +   ++Y  L+  LCK G++K A+ L+                   D + K         
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 463 ----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
               M  ++ +PN+VTY  LI GFC  G L +A  LLNE+  K + P+  T+ I+ + + 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 519 EKG 521
           ++G
Sbjct: 291 KEG 293



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+I  + L+    K+ +    ++   +  D    + V++ + L+ AL K    +    ++
Sbjct: 383 NTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALF 442

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K+M  + I+ ++ ++  +++GLCK G+L  A ++ + +   G    + TY ++I G+CK 
Sbjct: 443 KKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKA 502

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG-FCKDENISAAMKVFEEMGSHGI 290
           G      +A A+   M +NG +PN +TF+ +I   F KDEN   A K+  EM + G+
Sbjct: 503 GLFD---EALALLSKMEDNGCIPNAITFDIIICALFEKDEN-DKAEKLLREMIARGL 555


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L  +++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LS  +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 157/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +  D+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 143/270 (52%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +    +++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSADLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWSLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 229/469 (48%), Gaps = 54/469 (11%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           S   D LCR S   D ++               F+       + SV+S N ++    K G
Sbjct: 250 SIVVDGLCRQSRFQDAVLF--------------FQDTEGKEFQPSVVSFNTIMSRYCKLG 295

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
             +  +  +  M +  +  +  S+N +++GLC AG + +A D+  DM++ G+ P +VTYN
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 226 ILIDGY--------------------------------CKKGGIGKMYKADAVFKDMVEN 253
           IL  G+                                C    IG + +A  ++K+M+ +
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G   + ++   L+   CK   +  A K+F EM ++G+   ++TY++LI+GLC  G++ +A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + L ++M ++ + PN +   A++ G C+K  + +AR+ FD +    LS  +I YN +ID 
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           Y K G   +A  +   + ++G+ P + T+N L+ G      +   R +++ +  +G+   
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            VTY  L+   C++G  +  + LL E   M+ +   P  +TY V+IKG C++ KL+++  
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSE---MKAKAIGPTHITYTVVIKGLCKQWKLQESCQ 652

Query: 494 LLNELLEKGLIPNQTTYQIVREEM-----MEKGFIPDIEGHMYNISGTS 537
           LL ++   GL P+Q +Y  + +       M K F    +  ++N+  TS
Sbjct: 653 LLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTS 701



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 116 SIIIDMLML-AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           SII   ++L +  K+ +  + F+ F      GL+  +++ + L+  L K+G+ +    +Y
Sbjct: 420 SIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY 479

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M   RI  N      +L GLC+ GK+++A    + + +  +S  ++ YNI+IDGY K+
Sbjct: 480 EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +  K   ++K + E GI P  VTFN+L+ GFC +  +S A ++ + +  HG+    
Sbjct: 540 GNTREAVK---LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY +L+N  C +G +   + L  EM A  + P  +T   +I G CK+  ++++  L +D
Sbjct: 597 VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLED 656

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +   GL+P  ++YNT+I A+CK   M  AF + + ML   + P   TYN LI G    G+
Sbjct: 657 MDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++   N++  L N  +      Y  ++ A C  G   KAV    +M +   E    +I  
Sbjct: 717 LKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFE---VSIRD 773

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           Y+ +I   C++  + +A      +L  G+ P+Q  ++++     + G +
Sbjct: 774 YSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHL 822



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 242/531 (45%), Gaps = 42/531 (7%)

Query: 24  LKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIR 83
           L ++  + +I  L   DAD  +   Y    + E    HS      + H L   K+  ++R
Sbjct: 89  LNHSQVDQIIEHLNVEDADSAVDFYYLL--SNEFGFQHSRFSRLVVSHVLARKKRLNELR 146

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
             L   + +    S  ++   L     S   ++++ DML  AY ++   H       +  
Sbjct: 147 LVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMK 206

Query: 144 DYGLKSSVLSCNQLLR--------------------------------ALVKEGKFEDVE 171
           D     S+ + N LL                                  L ++ +F+D  
Sbjct: 207 DLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAV 266

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
             +++ + +  + ++ SFN +++  CK G ++ A      M   G+ P   +YNILI G 
Sbjct: 267 LFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGL 326

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
           C  G +G   +A  +  DM  +G+ P+ VT+N L  GF     I+ A  + ++M   G  
Sbjct: 327 CIAGSMG---EALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPN 383

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             +VTY  LI G C  G ++EA+ L  EM++ G + ++++S  L+   CK + V+ A  L
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKL 443

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F ++   GL P +ITY+TLI   CK+G ++ A  +   M    ++P+   +  ++ GL  
Sbjct: 444 FCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCE 503

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-P 470
           +G +   R   + L+ + +   ++ YNI++    K G +++AV L    +K   EK   P
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKL----YKQLGEKGISP 559

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            IVT+N L+ GFC   KL  A  LL+ +   GL PN  TY  +     E+G
Sbjct: 560 TIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEG 610



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 41/413 (9%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           ++GL+  +++ N L +     G       + ++M  +    NL ++  ++ G C+ G + 
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  + ++M S G    +++  +L+   CK   +   +K   +F +M  NG+ P+ +T++
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK---LFCEMEANGLRPDLITYS 460

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD------------ 311
           TLI G CK   +  A+ ++E+M S+ I    + + +++ GLC  GK+             
Sbjct: 461 TLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITS 520

Query: 312 -----------------------EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
                                  EAV L  ++   G+ P +VT N+L+ GFC  + + +A
Sbjct: 521 NLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQA 580

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R L D I   GL P+ +TY TL++ YC+EG M+    + + M  + + P   TY  +I G
Sbjct: 581 RRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKG 640

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L ++  ++    ++ ++   G+    V+YN ++ A CK    +KA  L D+M     E  
Sbjct: 641 LCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE-- 698

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P  VTYN+LI GFC  G L+DA+ LL  L  + +  N+  Y  + +    KG
Sbjct: 699 -PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKG 750



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           + GK +     F  L T + SL  + I+ ++++  Y+K        + +K+ G+ G+  +
Sbjct: 503 EKGKISQARMYFDYLITSNLSL--DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           +++ N L+       K      +   +K   +E N  ++  ++N  C+ G +    +++ 
Sbjct: 561 IVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +MK+  + P  +TY ++I G CK+    K+ ++  + +DM   G+ P++V++NT+I  FC
Sbjct: 621 EMKAKAIGPTHITYTVVIKGLCKQW---KLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K  ++  A +++++M  H +    VTYN LING CV G L +A  L   +    +  N  
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKY 737

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
               +I   C K  V+KA V F  + E+G   S+  Y+ +I   CK   + +A      M
Sbjct: 738 AYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMM 797

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L  GV PD   +  L+    + G++     ++ E++ +G
Sbjct: 798 LSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 179/379 (47%), Gaps = 5/379 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H   K G+      ++  +  CS+ +  NS+I   +++   +  K       F    
Sbjct: 461 TLIHGLCKQGEVQQAILLYEKM--CSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
              L   ++  N ++   +K G   +   +YK++  + I   + +FN ++ G C   KL+
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +++ +K  G+ P  VTY  L++ YC++G +  + +   +  +M    I P  +T+ 
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE---LLSEMKAKAIGPTHITYT 635

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I G CK   +  + ++ E+M + G+    V+YN++I   C    + +A  L D+M+  
Sbjct: 636 VVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLH 695

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L+P  VT N LINGFC    ++ A  L   +  + ++ +   Y T+I A+C +G ++ A
Sbjct: 696 NLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKA 755

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M+++G    +  Y+ +I  L +   V   +     ++++G+      + +L+ A
Sbjct: 756 VVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815

Query: 444 LCKDGKSKKAVSLLDEMFK 462
             + G       LL EM K
Sbjct: 816 FHQCGHLNSEFELLAEMIK 834



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL+ + ++   L+    +EG  + +  +  EMK + I     ++  V+ GLCK  KL +
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           +  ++EDM ++G++P  V+YN +I  +CK      M KA  ++  M+ + + P  VT+N 
Sbjct: 650 SCQLLEDMDAVGLTPDQVSYNTIIQAFCKAR---DMRKAFQLYDKMLLHNLEPTSVTYNI 706

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFC   ++  A  +   + +  +      Y ++I   C  G +D+AV    +M+  G
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            + ++   +A+I   CK+ LV +A+  F  +   G+ P    +  L++A+ + G +   F
Sbjct: 767 FEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEF 826

Query: 385 AMRNSMLDRGVL 396
            +   M+  G L
Sbjct: 827 ELLAEMIKSGWL 838



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 40/199 (20%)

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
           S +    S + ++ L  AY +   + DA  +   M D   +  + TYN L+  L R  N+
Sbjct: 171 SFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL-RHSNI 229

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----FK--------- 462
             + ++ NE+  +G      T +I+V  LC+  + + AV    +     F+         
Sbjct: 230 --MWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTI 287

Query: 463 -------------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
                              M K    P+  +YN+LI G C  G + +A  L N++   GL
Sbjct: 288 MSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGL 347

Query: 504 IPNQTTYQIVREEMMEKGF 522
            P+  TY I     + KGF
Sbjct: 348 EPDMVTYNI-----LAKGF 361


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 214/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E F+   ++       +C ++L  L+K   F+ V   YKE+   
Sbjct: 71  GLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++  CK G++  A  + + +   G+ P VV++N L+ GY + G + + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++  +    M  +G+ P+  T++ LI+G CK+  +  A ++F EM  +G+    VT+ +L
Sbjct: 191 FRLKSA---MHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  ++++ G  P+++T N LI G CKK  +++AR L D++S + L
Sbjct: 248 IDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKEL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++  +++ G++    TY +++   CK G  K    LL E   M ++   P +VT
Sbjct: 368 MLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKE---MXRDGHVPCVVT 418



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    ++  +  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK+G   +M  A +VF  + + G+ P+ V+FNTL+ 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEG---EMRLAQSVFDAITKWGLRPSVVSFNTLMS 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+DEA  L +EM+ +GL P
Sbjct: 180 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  QG SP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  + + PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           G+S  A  +L  M  +  +   P+  TY ++I  FC+KG ++  + LL E+   G +P
Sbjct: 360 GRSVDAEKMLRGMLSVGLK---PDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 160/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  +  A  VF+ +   G+   VV++N+L++G   
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIR 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  +++A  LF+++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   +L +G  PD+ TYN LI GL ++G+++  R++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
              ++   +TY  L+   CK+G  + A      M    KE    + V Y  LI G CQ+G
Sbjct: 304 MKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMI---KENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L  +L  GL P+  TY ++  E  +KG
Sbjct: 361 RSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKG 395


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 245/497 (49%), Gaps = 30/497 (6%)

Query: 30  NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
           N  IL  FN   D V +  +       ++   S++    ++ S+V  K  P   S L   
Sbjct: 55  NAKILSSFNGIDDAVTLFNHLI----NMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQM 110

Query: 90  VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS 149
           V  G   S+ T+              SI I+     Y    +    F         G + 
Sbjct: 111 VFKGVTPSIFTL--------------SIWIN----CYCHLGEMGFAFSVLGIVLKRGYQP 152

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           + ++   +++ L   G+ +     +  +  + + L+   +  ++NGLCK G+   A  ++
Sbjct: 153 NNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL 212

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M+   V P +V YN++ID +CK        KA  ++  +V+ GI P+ +T+ +LI GF
Sbjct: 213 QEMEGQVVKPNIVIYNMIIDSFCKDE---LTCKARDLYLKIVDMGIDPDILTYTSLIRGF 269

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+        ++  EM +  I   V T+N LI+  C  GK+ EA  + + M+  G +P++
Sbjct: 270 CRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDI 329

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N LI+G C    V +AR LFD + E+G+ P V +Y  LI  YCK  R+++A ++ N 
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE 389

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M  + ++ D+  Y+ LI GL + G +     + + + N+G    ++TYNIL+ A CK   
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCK--- 446

Query: 450 SKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             + + +  E+FK+   K   P ++TYN+LI G+C+  ++ +A  LL+ +  K L P+  
Sbjct: 447 -IQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSI 505

Query: 509 TYQIVREEMMEKGFIPD 525
           TY  + + + + G I D
Sbjct: 506 TYNSLFDGLCKSGRISD 522



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 180/332 (54%), Gaps = 3/332 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +I +M++ ++ K+       + + +  D G+   +L+   L+R   + G++ +V+ + 
Sbjct: 223 NIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM  + I  N+ +FN +++  C+ GK+ +A  +   M   G  P +VT+N LI G+C  
Sbjct: 283 CEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLH 342

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A  +F  + E GILP+  ++  LI G+CK + I  A+ +F EM    +   +
Sbjct: 343 GNV---LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V Y+SLI+GLC  G++  A  L   +   G  PNV+T N LI+ FCK + ++    LF  
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +GL+P+V+TYN LI+ YCK  R+ +A  + + M  + + PD  TYN L  GL + G 
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
           +     +   +   G    + TYN+L+ A CK
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 8/351 (2%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+  +      +K +++  N ++ +  K+        +Y ++    I+ ++ ++  ++ 
Sbjct: 208 AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIR 267

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C+ G+  +   +M +M +  ++P V T+N+LID +C+KG   KM +A  +F  MV+ G
Sbjct: 268 GFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG---KMIEAQGMFNLMVKRG 324

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
             P+ VTFNTLI G C   N+  A K+F+ +   GI   V +Y  LI G C   ++DEAV
Sbjct: 325 QQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAV 384

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L +EM    +  ++V  ++LI+G CK   +  A  LF  I+  G  P+VITYN LIDA+
Sbjct: 385 SLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAF 444

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK   ++    +   M  +G+ P V TYN LI G  +   +    N+++ + +  +    
Sbjct: 445 CKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDS 504

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQ 484
           +TYN L   LCK G+   A     E+FK+      P ++ TYNVL+  FC+
Sbjct: 505 ITYNSLFDGLCKSGRISDAW----ELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 116/234 (49%), Gaps = 23/234 (9%)

Query: 59  ASHSLLLTGRLLHSLVVAKK-----------YPKIRSFLHMFVKNGKFTSVSTIFHALST 107
            + + L++G  LH  V+  +            P + S+  + +    +     I  A+S 
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG---YCKCKRIDEAVSL 386

Query: 108 CSDSLCRNSIIIDMLMLAYV-----KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
            ++  C+N +++D+++ + +     K+ +    +E F    + G   +V++ N L+ A  
Sbjct: 387 FNEMRCKN-MVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFC 445

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           K    +    ++K M  + +   + ++N ++NG CK+ ++ +A +++  M+S  ++P  +
Sbjct: 446 KIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSI 505

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           TYN L DG CK G I   ++   +FK M   G   +  T+N L+D FCK ++++
Sbjct: 506 TYNSLFDGLCKSGRISDAWE---LFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 184/346 (53%), Gaps = 6/346 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V   + L +   K+G     E +  EM    ++ N+  +   +  LC+  K+ +A
Sbjct: 228 GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEA 287

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E MK  GV P + TY+ +IDGYCK G + + Y    ++K+++   +LPN V F TL
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY---GLYKEILVAELLPNVVVFGTL 344

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +DGFCK   + AA  +F  M   G+   +  YN LI+G C  G + EA+ L  EM +  L
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T   LING C ++ + +A  LF  +  + + PS +TYN+LI  +CKE  +E A  
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALD 464

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M   GV P++ T++ LI G  +  N++    +  E+   G+   +VTY  L+ A  
Sbjct: 465 LCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHF 524

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           K+   K+A+ L  +M +       PN  T+  L+ GF ++G+L DA
Sbjct: 525 KEANMKEALRLYSDMLEAGIH---PNDHTFACLVDGFWKEGRLSDA 567



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 205/382 (53%), Gaps = 11/382 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K +V      +R L +E K E+ E +++ MK   +  NL +++ +++G CK G L +A
Sbjct: 263 GVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQA 322

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + +++    + P VV +  L+DG+CK     ++  A ++F  MV+ G+ PN   +N L
Sbjct: 323 YGLYKEILVAELLPNVVVFGTLVDGFCKAR---ELVAARSLFVHMVKFGVDPNLYVYNCL 379

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK  N+  AM +  EM S  ++  V TY  LINGLC + +L EA  L   M    +
Sbjct: 380 IHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERI 439

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+ VT N+LI+GFCK+  +EKA  L  +++  G+ P++IT++TLID YCK   ++ A  
Sbjct: 440 FPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMG 499

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +G++PDV TY  LI    +E N++    + ++++  G+     T+  LV    
Sbjct: 500 LYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 559

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK------WPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           K+G+   A+    E  +    K       W   V +  LI+G CQ G +  A+   +++ 
Sbjct: 560 KEGRLSDAIDFYLENNQAATGKSIVQRSCW-KYVGFTCLIEGLCQNGYILRASRFFSDMK 618

Query: 500 EKGLIPNQTTY-QIVREEMMEK 520
             G+ P+  +Y  +++  + EK
Sbjct: 619 SGGVTPDIWSYVSMLKAHLREK 640



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 232/458 (50%), Gaps = 7/458 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKN-GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           ++H L  A KY   R  +   ++   +++  + I H L    + +      I +  L  +
Sbjct: 115 VIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIM 174

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           + ++  L  +A   + +        +C  +L  LV+  +F+ V   Y+ M  R +  ++ 
Sbjct: 175 EFLEMGLFEDALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 234

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            ++ +     K G  +K   ++++M SLGV P V  Y I I   C++    KM +A+ +F
Sbjct: 235 IYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE---NKMEEAEKMF 291

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           + M  +G++PN  T++ +IDG+CK  N+  A  +++E+    +   VV + +L++G C  
Sbjct: 292 ELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 351

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +L  A +L   M+  G+ PN+   N LI+G CK   + +A  L  ++    LSP V TY
Sbjct: 352 RELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTY 411

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             LI+  C E R+ +A  +   M +  + P   TYN LI G  +E N+E   ++ +E+ +
Sbjct: 412 TILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTS 471

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           +G+   ++T++ L+   CK    K A+ L    F+M  +   P++VTY  LI    ++  
Sbjct: 472 SGVEPNIITFSTLIDGYCKVRNIKAAMGL---YFEMTIKGIVPDVVTYTTLIDAHFKEAN 528

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +++A  L +++LE G+ PN  T+  + +   ++G + D
Sbjct: 529 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSD 566



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 47/311 (15%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+  ++   N L+    K G   +   +  EM+   +  ++ ++  ++NGLC   +L +
Sbjct: 367 FGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAE 426

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           A+ + + MK+  + P  VTYN LI G+CK+  I K   A  +  +M  +G+ PN +TF+T
Sbjct: 427 ANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK---ALDLCSEMTSSGVEPNIITFST 483

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LIDG+CK  NI AAM ++ EM   GI   VVTY +LI+    +  + EA+ L  +M+ +G
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543

Query: 325 LKPNVVTSNALINGF-------------------------------------------CK 341
           + PN  T   L++GF                                           C+
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQ 603

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              + +A   F D+   G++P + +Y +++ A+ +E R+ D   +   M+  G+LP++  
Sbjct: 604 NGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV 663

Query: 402 YNCLIAGLSRE 412
            N L+A   +E
Sbjct: 664 -NQLLAMFYQE 673



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 40/283 (14%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V +   L+  L  E +  +   +++ MK  RI  +  ++N +++G CK   + KA 
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKA----------------DAV 246
           D+  +M S GV P ++T++ LIDGYCK    K  +G  ++                 DA 
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAH 523

Query: 247 FK------------DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           FK            DM+E GI PN+ TF  L+DGF K+  +S A+  + E         +
Sbjct: 524 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSI 583

Query: 295 VT--------YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           V         +  LI GLC +G +  A     +M + G+ P++ +  +++    ++K + 
Sbjct: 584 VQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRIT 643

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              +L  D+ + G+ P+++    L   Y + G +  A  + NS
Sbjct: 644 DTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACFLTNS 686


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 44/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR---RRIELNLDSFNFVLNG 195
           F+R  + G    V S N L++ L  E K ++   +   M          N+ S+N V++G
Sbjct: 150 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
             K G+++KA  +  +M   G+ P VVTYN LIDG CK      M KA A+ + M + G+
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA---MDKAVAILQHMFDKGV 266

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+  T+N +I G+C    +  A+++ ++M   G+   VVTY+ LI   C  G+  EA +
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326

Query: 316 LRDEMMASGLKPNVVTSNALING-----------------------------------FC 340
           + D M+  G KPN    + L++G                                   + 
Sbjct: 327 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   V+KA   F ++ + GL P V++Y+T+I   CK GR+EDA    N M+  G+ P++ 
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           ++  LI GL   G  + V  +  E++N G+    +  N ++  LCK+G+  +A    D +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             +  +   P++V+YN LI G+C  GK++++   L+ ++  GL P+  TY  +     + 
Sbjct: 507 IHIGVK---PDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563

Query: 521 GFIPD 525
           G + D
Sbjct: 564 GRVED 568



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 184/327 (56%), Gaps = 10/327 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASD-IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           + N ++ GLC   + + A D +   M  LG +P V +YN LI G C +    K  +A  +
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEK---KSQEALEL 184

Query: 247 FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
              M  +G     PN V++NT+IDGF K+  +  A  +F EM   G+   VVTYNSLI+G
Sbjct: 185 LIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG 244

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +D+AVA+   M   G+ P+  T N +I G+C    +E+A  L   +S  GL P 
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+TY+ LI  YCK GR  +A ++ +SM+ +G  P+ + Y+ L+ G + +G +  VR++++
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+      +NIL+ A  K G   KA++   E   M +    P++V+Y+ +I   C
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE---MRQNGLRPDVVSYSTVIHILC 421

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTY 510
           + G++EDA    N+++ +GL PN  ++
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISF 448



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 215/422 (50%), Gaps = 41/422 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K+    GL+  V++ + L++   K G+  +   V+  M R+  + N   ++ +L+G   
Sbjct: 293 LKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYAT 352

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L    D+++ M   G+  +   +NILI  Y K G + K   A   F +M +NG+ P+
Sbjct: 353 KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA---FTEMRQNGLRPD 409

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V+++T+I   CK   +  A+  F +M S G++  ++++ SLI+GLC  G+  +   L  
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 469

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+ P+ +  N +++  CK+  V +A+  FD +   G+ P V++YNTLID YC  G
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE---------------------- 416
           +M+++    + M+  G+ PD  TYN L+ G  + G VE                      
Sbjct: 530 KMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 589

Query: 417 -------------GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
                          R +  ++V+ G +  + TYN ++G LC++    +A+ + +++   
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           E E    ++ T++++I    + G++++A  L + ++ +G +P+  TY ++ +  +E+G +
Sbjct: 650 EFEL---DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLL 706

Query: 524 PD 525
            +
Sbjct: 707 EE 708



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 200/413 (48%), Gaps = 38/413 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKF-----EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           G+ S   +C +L R ++   +      ED   ++ E+  +    ++ +FN VL  + +A 
Sbjct: 4   GVSSGRRTCLELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARAD 63

Query: 201 KLNK-------ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
             +        A  +   M   GV+       ILI  +C    +G++  A A F   ++ 
Sbjct: 64  SSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCT---VGRLDLAFAAFALFLKT 120

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           G     VT N LI G C       AM  VF  M   G    V +YN+LI GLCV+ K  E
Sbjct: 121 GWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 180

Query: 313 AVALRDEMMASG---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           A+ L   M A G     PNVV+ N +I+GF K+  V+KA  LF ++  QGL P V+TYN+
Sbjct: 181 ALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LID  CK   M+ A A+   M D+GV+PD  TYN +I G    G +E    ++ ++  +G
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           ++  +VTY++L+   CK G+  +A S+ D M    ++ + PN   Y++L+ G+  KG L 
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV---RKGQKPNSTIYHILLHGYATKGALI 357

Query: 490 DANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           D   LL+ ++  G+      + I+                  EM + G  PD+
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 410



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 194/367 (52%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+ A  K G  +     + EM++  +  ++ S++ V++ LCK G++  A      M S
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+SP ++++  LI G C    IG+  K + +  +M+  GI P+ +  NT++D  CK+  
Sbjct: 439 EGLSPNIISFTSLIHGLC---SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A   F+ +   G+   VV+YN+LI+G C  GK+DE++   D M++ GL+P+  T N+
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+NG+ K   VE A  L+ ++  + +    IT N ++    + GR+  A  +   M+DRG
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TYN ++ GL     V+    +  +L +      + T++I++ AL K G+  +A 
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           SL   M         P+++TY+++IK   ++G LE+++ L   + + G   +     I+ 
Sbjct: 676 SLFSAMV---LRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732

Query: 515 EEMMEKG 521
             ++EKG
Sbjct: 733 RRLLEKG 739



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 222/443 (50%), Gaps = 8/443 (1%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            LH +   G    V  +   +    D +       ++L+ AY K+        AF     
Sbjct: 346 LLHGYATKGALIDVRDLLDLM--IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQ 403

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL+  V+S + ++  L K G+ ED  Y + +M    +  N+ SF  +++GLC  G+  K
Sbjct: 404 NGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKK 463

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             ++  +M + G+ P  +  N ++D  CK+   G++ +A   F  ++  G+ P+ V++NT
Sbjct: 464 VEELAFEMINRGIHPDAIFMNTIMDNLCKE---GRVVEAQDFFDMVIHIGVKPDVVSYNT 520

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LIDG+C    +  ++K  + M S G+     TYNSL+NG   +G++++A+AL  EM    
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +K   +TSN +++G  +   +  AR L+  + ++G    + TYNT++   C+   +++A 
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            M   +  +    DV T++ +I  L + G ++  +++ + +V  G    ++TY++++ + 
Sbjct: 641 RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH 700

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
            ++G  +++ +L      MEK     +    N++++   +KG +  A   L ++ EK   
Sbjct: 701 IEEGLLEESDNLF---LSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFS 757

Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
              +T  ++   + EK +  +++
Sbjct: 758 LEASTAALLIPIVSEKKYQKEVK 780



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 168/372 (45%), Gaps = 45/372 (12%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM--LAYVKNMK--P 132
           P + S+   +H+  K G+      ++H     S+ L  N I    L+  L  +   K   
Sbjct: 408 PDVVSYSTVIHILCKTGRVED--AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 465

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
            L FE   R    G+    +  N ++  L KEG+  + +  +  +    ++ ++ S+N +
Sbjct: 466 ELAFEMINR----GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------- 237
           ++G C  GK++++   ++ M S+G+ P   TYN L++GY K G +               
Sbjct: 522 IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV 581

Query: 238 -----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
                            G++  A  ++  MV+ G      T+NT++ G C++  +  A++
Sbjct: 582 KFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 641

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
           +FE++ S      V T++ +IN L   G++DEA +L   M+  G  P+V+T + +I    
Sbjct: 642 MFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           ++ L+E++  LF  + + G +      N ++    ++G +  A      + ++    + S
Sbjct: 702 EEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEAS 761

Query: 401 TYNCLIAGLSRE 412
           T   LI  +S +
Sbjct: 762 TAALLIPIVSEK 773



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 8/242 (3%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           DS   NS     L+  Y KN +       ++      +K   ++ N +L  L + G+   
Sbjct: 549 DSWTYNS-----LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +Y +M  R  +L ++++N VL GLC+   +++A  + ED++S      V T++I+I+
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
              K   +G++ +A ++F  MV  G +P+ +T++ +I    ++  +  +  +F  M  +G
Sbjct: 664 ALLK---VGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            AA     N ++  L   G +  A     ++          T+  LI    +KK  ++ +
Sbjct: 721 CAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVK 780

Query: 350 VL 351
            L
Sbjct: 781 FL 782


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 216/425 (50%), Gaps = 45/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFE---DVEYVYKEMKRRRIELNLDSFNFVLNG 195
            +R  + G K  + S   LL+ L  +   +   D+ ++  + K R   L++ ++  V+NG
Sbjct: 158 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR-CPLDVVAYTTVING 216

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L + G+L+KA  + + M   G SP VVTY+ +I    K      M KA  VF  MV+NG+
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA---MDKATQVFTRMVKNGV 273

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+ + + +L+ G+C       A+ +F++M  HG+   VVTY +L++ LC +GK  EA  
Sbjct: 274 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 333

Query: 316 LRDEMMASGLKPNVVTSNALINGFC----------------------------------- 340
           + D ++  G KP+  T   L++G+                                    
Sbjct: 334 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 393

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   V++A ++F ++ +QGL+P ++ Y T++D  C  GR++DA +  NS+   G+ P++ 
Sbjct: 394 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 453

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +  LI GL      + V  +  E+++ G+    + +N ++G LCK G+  +A +L D M
Sbjct: 454 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            ++  E   PN  TYN LI G+C  GK+++A  LL  ++  G+ P+  TY  +     + 
Sbjct: 514 VRIGIE---PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 570

Query: 521 GFIPD 525
           G I D
Sbjct: 571 GRIED 575



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 112 LCRNSIIIDMLML-----AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           + +N ++ D +M       Y  + KP      FK+   +G++  V++   L+  L K GK
Sbjct: 268 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 327

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             +   ++  + +R  + +  ++  +L+G    G L +  D+++ M   G+      +N+
Sbjct: 328 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 387

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           ++  Y K     K+ +A  VF +M + G+ P+ V + T++D  C    +  A+  F  + 
Sbjct: 388 IMGAYAKHN---KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S G+A  +V + +LI+GLC   K D+   L  EM+  G+  + +  NA++   CKK  V 
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A+ LFD +   G+ P+  TYNTLID YC +G+M++A  +   M+  GV P   TYN +I
Sbjct: 505 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 564

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            G S+ G +E    ++ E+   G+  G+VTY +L+  L + G++  A  L   M K +
Sbjct: 565 NGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 622



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 167/320 (52%), Gaps = 7/320 (2%)

Query: 189 FNFVLNGLCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           F+ +L GLC   + + A DI +  M  LG  P + +Y IL+ G C      +      + 
Sbjct: 137 FSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIM 196

Query: 248 KDMVENGILP-NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            D    G  P + V + T+I+G  ++  +  A  +F+ M   G +  VVTY+S+I+ L  
Sbjct: 197 AD--HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 254

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
              +D+A  +   M+ +G+ P+ +   +L++G+C     ++A  +F  +   G+ P V+T
Sbjct: 255 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 314

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y  L+D  CK G+  +A  + +S++ RG  PD +TY  L+ G + EG +  + ++++ ++
Sbjct: 315 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMM 374

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             GM+ G   +N+++GA  K  K  +A+ +      M ++   P+IV Y  ++   C  G
Sbjct: 375 KKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN---MRQQGLNPDIVNYGTVLDILCTAG 431

Query: 487 KLEDANGLLNELLEKGLIPN 506
           +++DA    N L  +GL PN
Sbjct: 432 RVDDALSQFNSLKSEGLAPN 451



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 47/310 (15%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM---GSHGIAAGVVTYNS 299
           A  VF  +++ G   +    N  +    +  + + A+ +F  M   G+   A  + TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIATYGI 104

Query: 300 LINGLCVD-GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA---------- 348
           +I G C   G+LD A A    ++ +GL+ + +  + L+ G C ++    A          
Sbjct: 105 VI-GCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPE 163

Query: 349 --------------RVLFDDISEQ-------------GLSP-SVITYNTLIDAYCKEGRM 380
                         + L DD + Q             G  P  V+ Y T+I+   +EG++
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A+++ ++MLDRG  PDV TY+ +I+ LS+   ++    +   +V NG+    + Y  L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           V   C  GK K+A+ +  +M +   E   P++VTY  L+   C+ GK  +A  + + L++
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVE---PDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 501 KGLIPNQTTY 510
           +G  P+ TTY
Sbjct: 341 RGHKPDSTTY 350



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 7/168 (4%)

Query: 351 LFDDISEQGLS---PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           LF+ +   G +   P++ TY  +I    + GR++ AFA    ++  G+      ++ L+ 
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK 142

Query: 408 GL-SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
           GL  R    + +  ++  +   G +  L +Y IL+  LC D  S++A+ LL  M   + +
Sbjct: 143 GLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIM--ADHK 200

Query: 467 KKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + P ++V Y  +I G  ++G+L+ A  L + +L++G  P+  TY  +
Sbjct: 201 GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 248


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 219/438 (50%), Gaps = 47/438 (10%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G +   ++   LL+ L  + +  D ++ V + M       ++ S+N +
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169

Query: 193 LNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-----MYKAD 244
           L GLC   +  +A ++   M D +  G  P VV+YN +++G+ K+G   K     M KA 
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAM 229

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            V   MV+NG++P+ +T+N+++ G+C       A+   ++M S G+   VVTY+SL+N L
Sbjct: 230 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C +G+  EA  + D M   GL+P++ T   L+ G CK+  V ++  LFD +   G+ P +
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDI 349

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITYNTLID  C  G+M++A  +  SM+  GV PD+ TY  LI G  R   ++    +  E
Sbjct: 350 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 409

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V++G+   ++TYNI++  L    ++  A  L      + K      + TYN+++ G C+
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELY---VSITKSGTQLELSTYNIILHGLCK 466

Query: 485 K-----------------------------------GKLEDANGLLNELLEKGLIPNQTT 509
                                               G++++A  L       GL+P+  T
Sbjct: 467 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 526

Query: 510 YQIVREEMMEKGFIPDIE 527
           Y ++ E ++E+G + +++
Sbjct: 527 YSLMAENLIEQGSLEELD 544



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 205/397 (51%), Gaps = 16/397 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEG--------KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           G    V+S N +L    KEG          +    V   M +  +  +  ++N +L+G C
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            +G+  +A   ++ M+S GV P VVTY+ L++  CK G   +  +A  +F  M + G+ P
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG---RSTEARKIFDSMTKRGLEP 312

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +  T+ TL+ G CK+  +  + K+F+ M   G+   ++TYN+LI+G C+ GK+DEA  L 
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
             M++ G+KP++VT   LING+C+   ++ A  LF ++   G+SP++ITYN ++      
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R   A  +  S+   G   ++STYN ++ GL +    +    +   L    ++    T+
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLN 496
           NI++GAL K G+  +A     ++F         P++ TY+++ +   ++G LE+ + L  
Sbjct: 493 NIMIGALLKCGRMDEA----KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFL 548

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
            + E G   +      +  +++++G I     +++ I
Sbjct: 549 SMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 585



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 187/395 (47%), Gaps = 55/395 (13%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P V TY 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           ILI   C+ G +   +   A   ++V+ G   + +TF  L+ G C D+  S AM  V   
Sbjct: 97  ILIGCCCRAGRLDLGF---AALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGK----------------------------------- 309
           M   G    V +YN+L+ GLC + +                                   
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 310 -----------LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
                      +D+A+ + + M+ +G+ P+ +T N++++G+C     ++A      +   
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G+ P+V+TY++L++  CK GR  +A  + +SM  RG+ PD++TY  L+ G  +EG V   
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             + + +V  G++  ++TYN L+   C  GK  +A  LL  M  +  +   P+IVTY  L
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK---PDIVTYGTL 390

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           I G+C+  +++DA  L  E++  G+ PN  TY I+
Sbjct: 391 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S LH +  +G+          +   SD +  N +    LM    KN +     + F    
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMR--SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 306

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL+  + +   LL+   KEG+  + E ++  M R  ++ ++ ++N +++G C AGK++
Sbjct: 307 KRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 366

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A+ ++  M S+GV P +VTY  LI+GYC+   + +M  A A+FK+MV +G+ PN +T+N
Sbjct: 367 EATKLLASMVSVGVKPDIVTYGTLINGYCR---VSRMDDALALFKEMVSSGVSPNIITYN 423

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++ G       +AA +++  +   G    + TYN +++GLC +   DEA+ +   +  +
Sbjct: 424 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 483

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L+    T N +I    K   +++A+ LF   S  GL P V TY+ + +   ++G +E+ 
Sbjct: 484 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 543

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +  SM + G   D    N ++  L + G++
Sbjct: 544 DDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 18/267 (6%)

Query: 276 SAAMKVFEEMGSHG---IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           +AA+  +  M   G   +   V TY  LI   C  G+LD   A    ++  G + + +T 
Sbjct: 71  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130

Query: 333 NALINGFCKKKLVEKAR-VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
             L+ G C  K    A  ++   ++E G  P V +YN L+   C E R ++A  + + M 
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190

Query: 392 DR---GVLPDVSTYNCLIAGLSREG--------NVEGVRNIMNELVNNGMRAGLVTYNIL 440
           D    G  PDV +YN ++ G  +EG         ++    ++N +V NG+    +TYN +
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 250

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +   C  G+ K+A+  L    KM  +   PN+VTY+ L+   C+ G+  +A  + + + +
Sbjct: 251 LHGYCSSGQPKEAIGTLK---KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 307

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIE 527
           +GL P+  TY+ + +   ++G + + E
Sbjct: 308 RGLEPDIATYRTLLQGHCKEGRVIESE 334



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/327 (19%), Positives = 135/327 (41%), Gaps = 44/327 (13%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-----LMLAYVKNMKPHLGFEA 138
           S ++   KNG+ T    IF       DS+ +  +  D+     L+  + K  +     + 
Sbjct: 284 SLMNYLCKNGRSTEARKIF-------DSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F      G+K  +++ N L+      GK ++   +   M    ++ ++ ++  ++NG C+
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDG--YCKKGGIGK-MY-------------- 241
             +++ A  + ++M S GVSP ++TYNI++ G  + ++    K +Y              
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456

Query: 242 ---------------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
                          +A  +F+++    +     TFN +I    K   +  A  +F    
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           ++G+   V TY+ +   L   G L+E   L   M  +G   +    N+++    ++  + 
Sbjct: 517 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 576

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDA 373
           +A      I E+  S    T + L+++
Sbjct: 577 RAGTYLFMIDEKHFSLEASTASFLLES 603


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 220/440 (50%), Gaps = 8/440 (1%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA- 142
           +F+    K+GK  S+    +   T +      S+I   L+L ++  MK +    +  +  
Sbjct: 42  NFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEM 101

Query: 143 -GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               G+K      N ++ +L           V   M +  +E ++ +F  ++NGLC  G 
Sbjct: 102 HSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGD 161

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           + +A ++++ ++  G    V TY +LI+G CK   +GK  +A    + M E    PN V 
Sbjct: 162 VGRAVELVDHVEKTGYRSDVKTYGVLINGLCK---MGKTSEAVGWLRKMEERNWNPNVVV 218

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           ++T++DG CKD  +S A+ +  EM   GI   +VTY  LI GLC  G+  EA +L DEMM
Sbjct: 219 YSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMM 278

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G+ P++ + N L++  CK+  + +A+ +   +   G  P V TYN+LID YC + +M+
Sbjct: 279 KMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMD 338

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           +A  +   M+ RG LPD+  Y  LI G  +  N+    ++++E++  G    +VT+  L+
Sbjct: 339 EATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 398

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           G  C+ G+   A  L      M K  + PN+ T  +++ G C+   L +A  L + + + 
Sbjct: 399 GGFCQVGRPLAAKELF---LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455

Query: 502 GLIPNQTTYQIVREEMMEKG 521
            L  N   Y I+ + M   G
Sbjct: 456 NLDLNIVIYSIILDGMCSAG 475



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 197/368 (53%), Gaps = 8/368 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G +S V +   L+  L K GK  +     ++M+ R    N+  ++ V++GLCK G +++A
Sbjct: 176 GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEA 235

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M   G+ P +VTY  LI G C     G+  +A ++  +M++ G++P+  + N L
Sbjct: 236 LGLCLEMSGKGIKPNLVTYTCLIQGLCN---FGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +D  CK+  I  A  V   M   G    V TYNSLI+  C+  ++DEA  + + M++ G 
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++V   +LI+G+CK K + KA  L D++ + G +P V+T+ TLI  +C+ GR   A  
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +  +M   G +P++ T   ++ GL +   +    ++ + +  + +   +V Y+I++  +C
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMC 472

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
             GK   A+    E+F     K    N+  Y ++I GF ++G L+ A  LL+ + E G +
Sbjct: 473 SAGKLNTAL----ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCM 528

Query: 505 PNQTTYQI 512
           P+  TY +
Sbjct: 529 PDSCTYNV 536



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 188/359 (52%), Gaps = 6/359 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++  L K+G   +   +  EM  + I+ NL ++  ++ GLC  G+  +A  ++++M  
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +GV P + + NIL+D  CK+G   K+ +A +V   M+  G +P+  T+N+LID +C    
Sbjct: 280 MGVMPDLQSLNILVDVLCKEG---KIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A +VFE M S G    +V Y SLI+G C    +++A+ L DEM+  G  P+VVT   
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI GFC+      A+ LF ++ + G  P++ T   ++D  CK   + +A ++ ++M    
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           +  ++  Y+ ++ G+   G +     + + L   G++  +  Y I++    K G   KA 
Sbjct: 457 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            LL  M   E+    P+  TYNV ++G   + ++  +   L  + +KG   + TT +++
Sbjct: 517 DLLSNM---EENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMI 572



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 185/355 (52%), Gaps = 17/355 (4%)

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           ST  D LC++ ++ + L L    + K              G+K ++++   L++ L   G
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGK--------------GIKPNLVTYTCLIQGLCNFG 265

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
           ++++   +  EM +  +  +L S N +++ LCK GK+ +A  ++  M  +G  P V TYN
Sbjct: 266 RWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYN 325

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            LID YC +    +M +A  VF+ MV  G LP+ V + +LI G+CK +NI+ AM + +EM
Sbjct: 326 SLIDRYCLQN---QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G    VVT+ +LI G C  G+   A  L   M   G  PN+ T   +++G CK +L+
Sbjct: 383 IKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLL 442

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +A  LF  + +  L  +++ Y+ ++D  C  G++  A  + + +  +G+  +V  Y  +
Sbjct: 443 SEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIM 502

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           I G +++G ++   ++++ +  NG      TYN+ V  L  + +  +++  L  M
Sbjct: 503 INGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMM 557



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 3/260 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V + N L+     + + ++   V++ M  R    ++ ++  +++G CK   +NKA  +++
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           +M  +G +P VVT+  LI G+C+   +G+   A  +F +M + G +PN  T   ++DG C
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQ---VGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K + +S A+ +F  M    +   +V Y+ +++G+C  GKL+ A+ L   + A GL+ NV 
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVY 497

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
               +INGF K+ L++KA  L  ++ E G  P   TYN  +     E  +  +      M
Sbjct: 498 AYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMM 557

Query: 391 LDRGVLPDVSTYNCLIAGLS 410
            D+G   D +T   +I  LS
Sbjct: 558 RDKGFSVDATTTEMIINYLS 577



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 7/270 (2%)

Query: 258 NEVTFNTLIDGFCKD---ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           N+  F   +   CK    ++I  A+  F  M        V+ +  L+  +        A+
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95

Query: 315 ALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +L  EM +S G+KP+    N +IN  C  KLV     +   + + GL PSV+T+  LI+ 
Sbjct: 96  SLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILING 155

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C +G +  A  + + +   G   DV TY  LI GL + G        + ++        
Sbjct: 156 LCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPN 215

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +V Y+ ++  LCKDG   +A+ L  EM     +   PN+VTY  LI+G C  G+ ++A  
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEM---SGKGIKPNLVTYTCLIQGLCNFGRWKEAGS 272

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           LL+E+++ G++P+  +  I+ + + ++G I
Sbjct: 273 LLDEMMKMGVMPDLQSLNILVDVLCKEGKI 302



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 4/196 (2%)

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDV 399
           K K +++A   F  +++    PSVI +  L+    K      A ++   M    G+ PD 
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
              N +I  L     V    +++  ++  G+   +VT+ IL+  LC  G   +AV L+D 
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           +   EK     ++ TY VLI G C+ GK  +A G L ++ E+   PN   Y  V + + +
Sbjct: 172 V---EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 520 KGFIPDIEGHMYNISG 535
            G + +  G    +SG
Sbjct: 229 DGLVSEALGLCLEMSG 244


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 219/470 (46%), Gaps = 75/470 (15%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      L  + ++ + LL    K GK E  E V ++M++  +  N+ +F+ ++NG 
Sbjct: 101 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 160

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG--------------------- 235
            K G L+KA D++ +M    V P  + Y ILIDGY K G                     
Sbjct: 161 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 220

Query: 236 -----------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                       +G+M +A ++  DM   GI P+ V + +LIDG+ K+ N  AA+ + +E
Sbjct: 221 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 280

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLD--------------------EAVALRDEMMASG 324
           M    I   VV YN+LI GL   GK D                    +A+ + +EM + G
Sbjct: 281 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYG 340

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + PN VT N LI G CK   VEKA    D++      P+ IT+  L+ AY +  + +   
Sbjct: 341 IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 400

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   ++  G+   ++ YN LI    R G     + +++E+V  G+ A LVTYN L+   
Sbjct: 401 QIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 460

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG----KLEDANGLLNELLE 500
           C     +KA+    +MF    +   PNI TYN L+ G    G     +E+   L++E+ E
Sbjct: 461 CTGSHVEKALKTYSQMFV---DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 517

Query: 501 KGLIPNQTTYQIVRE----------------EMMEKGFIPDIEGHMYNIS 534
           +GL+PN  TY I+                  EM+ KGF+P ++ +   IS
Sbjct: 518 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLIS 567



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 218/440 (49%), Gaps = 76/440 (17%)

Query: 155 NQLLRALVKEGKF----EDVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           N ++ A++ +G F    +DV   + KEMK RR+E +   F+ +LN L + G++++A  ++
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
            DM S G+ P +V Y  LIDGY K+G       A ++ ++M E  I  + V +N LI G 
Sbjct: 244 IDMYSKGIDPDIVNYASLIDGYFKEGN---QLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 270 -----------------------CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                                  CK E+   A+ +  EM S+GI    VTYN LI GLC 
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTED---ALDILNEMKSYGIMPNAVTYNILIGGLCK 357

Query: 307 DGKLDEAVALRDEMM-----------------------------------ASGLKPNVVT 331
            G +++A +  DEM+                                   ASGL+ ++  
Sbjct: 358 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 417

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N LI  FC+  +  KA+V+ D++ ++G+S  ++TYN LI  YC    +E A    + M 
Sbjct: 418 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 477

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV----TYNILVGALCKD 447
             G+ P+++TYN L+ GLS  G +E +     +LV+     GLV    TY+ILV    + 
Sbjct: 478 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 537

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G  KK + L  EM     +   P + TYNVLI  + + GK+ +A  LLN+LL KG IPN 
Sbjct: 538 GNRKKTIILHIEMI---TKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 594

Query: 508 TTYQIVREEMMEKGFIPDIE 527
            TY I+    +   + P+I+
Sbjct: 595 FTYDILTCGWLNLSYEPEID 614



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 211/424 (49%), Gaps = 42/424 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F+   + GL  + +S   ++ +L K G+  +   +  +M  R I  ++ +   V++GL K
Sbjct: 33  FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 92

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            GK  +A ++ E +  L ++P  VTY+ L+DGYCK   +GKM  A+ V + M +  + PN
Sbjct: 93  VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK---LGKMELAELVLQKMEKEHVPPN 149

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            +TF+++I+G+ K   +S A+ V  EM    +    + Y  LI+G    G+ D A     
Sbjct: 150 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 209

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM +  L+ + V  + L+N   +   +++AR L  D+  +G+ P ++ Y +LID Y KEG
Sbjct: 210 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 269

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG--------------------NVEGV 418
               A ++   M ++ +  DV  YN LI GL R G                      E  
Sbjct: 270 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDA 329

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
            +I+NE+ + G+    VTYNIL+G LCK G  +KA S LDEM  ME     P  +T+  L
Sbjct: 330 LDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME---FVPTPITHKFL 386

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGF 522
           +K + +  K +    +  +L+  GL  + T Y                ++V +EM+++G 
Sbjct: 387 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 446

Query: 523 IPDI 526
             D+
Sbjct: 447 SADL 450



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 61/370 (16%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G+ P VVT + ++ G+C+ G   K+ +A  +F++M E G+ PN V++ T+I+   K   +
Sbjct: 5   GIMPDVVTCSSILYGFCRHG---KLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRV 61

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A  +  +M   GI+  +VT  ++++GL   GK  EA  + + ++   L PN VT +AL
Sbjct: 62  MEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSAL 121

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           ++G+CK   +E A ++   + ++ + P+VIT++++I+ Y K+G +  A  +   M+ R V
Sbjct: 122 LDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 181

Query: 396 LPDVSTYNCLIAG-----------------------------------LSREGNVEGVRN 420
           +P+   Y  LI G                                   L R G ++  R+
Sbjct: 182 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 241

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           ++ ++ + G+   +V Y  L+    K+G    A+S++ EM   EK  ++ ++V YN LIK
Sbjct: 242 LIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM--KEKNIRF-DVVAYNALIK 298

Query: 481 GFCQKGKL--------------------EDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           G  + GK                     EDA  +LNE+   G++PN  TY I+   + + 
Sbjct: 299 GLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 358

Query: 521 GFIPDIEGHM 530
           G +   E  +
Sbjct: 359 GAVEKAESAL 368



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 144/261 (55%), Gaps = 3/261 (1%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M+ NGI+P+ VT ++++ GFC+   ++ A  +F EM   G+    V+Y ++IN L   G+
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           + EA  L+ +M+  G+  ++VT   +++G  K    ++A  +F+ I +  L+P+ +TY+ 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           L+D YCK G+ME A  +   M    V P+V T++ +I G +++G +    +++ E+V   
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +    + Y IL+    K G+   A     EM     E+   + V +++L+    + G+++
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE---SNVIFDILLNNLKRVGRMD 237

Query: 490 DANGLLNELLEKGLIPNQTTY 510
           +A  L+ ++  KG+ P+   Y
Sbjct: 238 EARSLIIDMYSKGIDPDIVNY 258


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 254/540 (47%), Gaps = 63/540 (11%)

Query: 24  LKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIR 83
           L++ +P  V   L + D D  + L +F W+ ++ R  H  ++   +L  L   +     R
Sbjct: 159 LRSLNPRLVCAVLRSQD-DERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGAR 217

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDS-LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
             L +  + G   S     + + + S + + RN++ I  LM                ++A
Sbjct: 218 RILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLM----------------QKA 261

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           G   ++  +  CN  +  LVK  K E      + MK   IE ++ S+N ++ G C   ++
Sbjct: 262 G---VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRI 318

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVT 261
           + A +++ +M   G  P  V+Y  ++   CK   + ++ +   + ++MV+N  ++P++VT
Sbjct: 319 DDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKR---LMENMVQNSNLIPDQVT 375

Query: 262 FNTLI-----------------------------------DGFCKDENISAAMKVFEEMG 286
           +NTLI                                   D FCK++NI  A  +  +M 
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S G    VVTY ++I+G C  GK+DEA  +  +M   G KPN VT   L+NG C      
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +AR + +   E   +P+ ITY+ ++    +EG++ +A  +   M+++G LP+    N LI
Sbjct: 496 EAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLI 555

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
             L R  NV G +  + E ++ G    +V +  ++   C+ G    A+S+L++M+   K 
Sbjct: 556 QSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKH 615

Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
              P+ +TY  L     +K +L++A+ L+ ++L KG+ P   TY+ V     + G + D+
Sbjct: 616 ---PDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDM 672



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 24/389 (6%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+ AL K G  +D     +E + +   ++   ++ V++  CK   ++KA  ++ DM S
Sbjct: 377 NTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS 436

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G +P VVTY  +IDG+C+   +GK+ +A  + + M ++G  PN VT+  L++G C +  
Sbjct: 437 KGCNPDVVTYTAIIDGFCR---VGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
              A ++      H      +TY+++++GL  +GKL EA  L  EM+  G  PN V  N 
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINL 553

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           LI   C+ + V  A+   ++   +G + +V+ + ++I  +C+ G ++ A +M   M    
Sbjct: 554 LIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSN 613

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD  TY  L   L ++  ++    ++ +++  G+    VTY  ++   C+ G+    +
Sbjct: 614 KHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMM 673

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
            LL++M       + P    YN +I+  C  G  E+A  LL ++L      +  T  I+ 
Sbjct: 674 KLLEKMI-----ARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILI 728

Query: 515 E----------------EMMEKGFIPDIE 527
           E                +M  +  IPD++
Sbjct: 729 ESYLIDGNALSAYKVACQMFRRNLIPDLK 757



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 193/405 (47%), Gaps = 36/405 (8%)

Query: 106 STCSDSLCRN-------SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLL 158
           S   DS C+N       S++IDM    Y K   P                  V++   ++
Sbjct: 412 SAVVDSFCKNKNIDKAKSLVIDM----YSKGCNP-----------------DVVTYTAII 450

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
               + GK ++ + + ++M +   + N  ++  +LNGLC  GK  +A +++   +    +
Sbjct: 451 DGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWT 510

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P  +TY+ ++ G  ++G   K+ +A  + ++M+E G LPN V  N LI   C+++N+  A
Sbjct: 511 PNAITYSAVMHGLRREG---KLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGA 567

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
            K  EE    G A  VV + S+I G C  G LD A+++ ++M  S   P+ +T   L + 
Sbjct: 568 KKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDA 627

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
             KK  +++A  L   +  +G+ P+ +TY  +I  +C+ GR++D   +   M+ R   P 
Sbjct: 628 LGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PF 685

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
            + YN +I  L   GN E    ++ +++    +    T +IL+ +   DG +  A  +  
Sbjct: 686 KTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVAC 745

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +MF   +    P++     + K     G   +A+ L+   +E+G+
Sbjct: 746 QMF---RRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGI 787



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 3/174 (1%)

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            I Y T++D   K    + A  +   M  RG+      ++ ++   SR G +     I+ 
Sbjct: 197 AIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILT 256

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +   G+   L   N  +  L K  K +KA+  L+ M     E   P+IV+YN LIKG+C
Sbjct: 257 LMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIE---PDIVSYNCLIKGYC 313

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
              +++DA  L+ E+  KG  P++ +Y  V   + +   + +++  M N+   S
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 264/557 (47%), Gaps = 53/557 (9%)

Query: 5   ANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDAD-----------PVLILRYF--- 50
           A   I+ + E ++ H       ++P+ +  +LFN+  D            +LI+ +    
Sbjct: 94  ARCLIKSLIERLKRH-------SEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMG 146

Query: 51  -----CWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
                 W ++E++ S        +L+ LV  +++  +     + +  G    V   F   
Sbjct: 147 LFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLF 206

Query: 106 STC-----------------SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             C                 S  +  N  I  + +L   ++ K     + F+    +G+ 
Sbjct: 207 QCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL 266

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            ++ + + ++    K G       +YKE+    +  N+  F  +++G CKA +L  A  +
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
              M   GV P +  YN LI G+CK G    M +A  +  +M    + P+  T+  LI+G
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGN---MLEAVGLLSEMESLNLSPDVFTYTILING 383

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C ++ ++ A ++F++M +  I     TYNSLI+G C +  +++A+ L  EM ASG++PN
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           ++T + LI+G+C  + ++ A  L+ +++ +G+ P V+TY  LIDA+ KE  M++A  + +
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL--VTYNILVGALCK 446
            ML+ G+ P+  T+ CL+ G  +EG +    +   E  NN  R+    V +  L+  LC+
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE--NNQQRSCWNHVGFTCLIEGLCQ 561

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
           +G   +A     +   M      P+I +Y  ++KG  Q+ ++ D   L  ++++ G++PN
Sbjct: 562 NGYILRASRFFSD---MRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618

Query: 507 QTTYQIVREEMMEKGFI 523
               Q++       G++
Sbjct: 619 LLVNQLLARFYQANGYV 635



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 160/310 (51%), Gaps = 22/310 (7%)

Query: 236 GIGKMYKADAVFKD---MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           G+ +  + D+V+ D   M+  G++P+   +  L     K    S   K+ +EM S GI  
Sbjct: 173 GLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKP 232

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            V  Y   I  LC D K++EA  + + M   G+ PN+ T +A+I+G+CK   V +A  L+
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            +I    L P+V+ + TL+D +CK   +  A ++   M+  GV P++  YNCLI G  + 
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           GN+     +++E+ +  +   + TY IL+  LC + +  +A  L     KM+ E+ +P+ 
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ---KMKNERIFPSS 409

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------VRE---------E 516
            TYN LI G+C++  +E A  L +E+   G+ PN  T+         VR+         E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 517 MMEKGFIPDI 526
           M  KG +PD+
Sbjct: 470 MTIKGIVPDV 479



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 168/342 (49%), Gaps = 3/342 (0%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N ++   L+  + K  +       F     +G+  ++   N L+    K G   +   + 
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+   +  ++ ++  ++NGLC   ++ +A+ + + MK+  + P   TYN LI GYCK+
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
                M +A  +  +M  +G+ PN +TF+TLIDG+C   +I AAM ++ EM   GI   V
Sbjct: 423 YN---MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           VTY +LI+    +  + EA+ L  +M+ +G+ PN  T   L++GF K+  +  A   + +
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
            ++Q    + + +  LI+  C+ G +  A    + M   G+ PD+ +Y  ++ G  +E  
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKR 599

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           +     +  +++  G+   L+   +L      +G  K A  L
Sbjct: 600 ITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 32/275 (11%)

Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           L   V +   L+  L  E +  +   ++++MK  RI  +  ++N +++G CK   + +A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCK----KGGIGKMYKA----------------DAV 246
           D+  +M + GV P ++T++ LIDGYC     K  +G  ++                 DA 
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 247 FK------------DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           FK            DM+E GI PN+ TF  L+DGF K+  +S A+  ++E          
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V +  LI GLC +G +  A     +M + G+ P++ +  +++ G  ++K +    +L  D
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           + + G+ P+++    L   Y   G ++ A  + NS
Sbjct: 610 MIKTGILPNLLVNQLLARFYQANGYVKSACFLTNS 644


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 229/472 (48%), Gaps = 35/472 (7%)

Query: 68  RLLHSLVVAKKYPK---IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R+L  ++    YP      S +H + K+  F+    +   +  C    C+   ++  +++
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE---CKPGYVVYNILI 420

Query: 125 AYV---KNMKPHLGFEAFKRAGDYGLKSSVL----SCNQLLRALVKEGKFEDVEYVYKEM 177
             +     +   + FE  ++A +  L +  +    +     R L   GKFE    V  EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
                  +  +++ V+  LC A ++  A  + ++MK  GV P V TY ILID + K G I
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            +   A     +MV +G  P  VT+ TLI  + K + +S A ++FE M + G    V+TY
Sbjct: 541 KQ---AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASG----------------LKPNVVTSNALINGFCK 341
            +LI+G C  G +++A  +   M                     KPNVVT  AL++G CK
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              V+ AR L + +   G  P+ I Y+ LID +CK  ++++A  + + M++ G  P+V T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y+ LI  L ++  ++ V  ++++++ N     +V Y  ++  L K  K+ +A  L   M 
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL---ML 774

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ME++   PN+VTY  +I GF + GK++    L  E+  KG  PN  TY ++
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 225/481 (46%), Gaps = 35/481 (7%)

Query: 58  RASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL---STCSDSLCR 114
           +A + +L  G +L+ + V        SF       GKF     + H +       D+   
Sbjct: 440 KAYNEMLSAGTVLNKVNVV-------SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY 492

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + +I  +   + V+N      F  FK     G+   V +   L+    K G  +      
Sbjct: 493 SEVIGFLCNASRVEN-----AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM R   E  + ++  +++   KA K++ A+++ E M + G  P V+TY  LIDGYCK 
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607

Query: 235 GGIGKM------YKADAVFKDM-----VENGIL--PNEVTFNTLIDGFCKDENISAAMKV 281
           G I K        + DA   D+     ++N +   PN VT+  L+DG CK   +  A  +
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
            E M   G     + Y++LI+G C   KLDEA  +  +M+  G  PNV T ++LI+   K
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFK 727

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
            K ++    +   + E   +P+++ Y  +ID   K  + ++A+ +   M ++G  P+V T
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           Y  +I G  + G V+    +  E+ + G     VTY +L+   C  G   +A +LL+EM 
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM- 846

Query: 462 KMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
              K+  WP ++ +Y  +I+G+  K +   + GLL E+ + G  P    Y+++ +  ++ 
Sbjct: 847 ---KQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKA 901

Query: 521 G 521
           G
Sbjct: 902 G 902



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 244/552 (44%), Gaps = 78/552 (14%)

Query: 13  TELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHS 72
           T ++      KL N D    IL    S   P L +++F W+ +++   H+  +   LL  
Sbjct: 125 THIVLRQFRQKL-NPDLVVEILSFLKS---PELCVKFFLWAGRQIGYDHTPAVYIALL-D 179

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           +     Y ++      F++  +      +   L+      CRN +               
Sbjct: 180 VFERGSYDRVP---EEFLREIRGDDKEVLGKLLNVLIRKCCRNGLW-------------- 222

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF--- 189
           ++  E   R  D+G K + ++ N L++  ++  K +  + V++EM    + L++D F   
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS--ELGLSMDEFTLG 280

Query: 190 -------------------------------NFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
                                          N +++GLC+A    +A D +  M+S    
Sbjct: 281 FFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI 340

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY IL+ G   K  +G+  +   +   M+  G  P+   FN+L+  +CK ++ S A
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKR---ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA 397

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR------DEMMASGL---KPNV 329
            K+ ++M       G V YN LI  +C  G+L   V         +EM+++G    K NV
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V+    + GF K    EKA  +  ++   G  P   TY+ +I   C   R+E+AF +   
Sbjct: 458 VSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M   GV+PDV TY  LI   S+ G ++   N ++E+V +G    +VTY  L+ A  K   
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK--- 571

Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             K VS+ +E+F++   K  +PN++TY  LI G+C+ G +E A  +   +     IP+  
Sbjct: 572 -AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVD 630

Query: 509 TYQIVREEMMEK 520
            Y  ++  + EK
Sbjct: 631 MYFKIKNNVAEK 642



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 196/437 (44%), Gaps = 52/437 (11%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN-------SIIIDM 121
           L+H+ + AKK         + +  G F +V T + AL    D  C++        I   M
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVIT-YTALI---DGYCKSGNIEKACQIYARM 620

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
              A + ++  +     FK   +   K +V++   L+  L K  K +D   + + M    
Sbjct: 621 RGDADIPDVDMY-----FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK------- 234
            E N   ++ +++G CKA KL++A ++   M   G +P V TY+ LID   K        
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 735

Query: 235 ----------------------GGIGKMYKADAVFKDMV---ENGILPNEVTFNTLIDGF 269
                                  G+ K+ K D  +K M+   E G  PN VT+  +IDGF
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
            K   +   +++F EMGS G A   VTY  LIN  C  G LDEA AL +EM  +    +V
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            +   +I G+ ++ ++     L +++ + G +P ++ Y  LID + K GR+E A  +   
Sbjct: 856 SSYCKVIEGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKE 913

Query: 390 MLDR--GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           ++     +    + Y  LI   S    +     +  +++ +G+   L T+  L+  L + 
Sbjct: 914 VISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRV 973

Query: 448 GKSKKAVSLLDEMFKME 464
            + ++A+ L D + +M+
Sbjct: 974 RRWEEALQLSDSLCQMD 990



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 15/341 (4%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
            N ++   C+ G  N A + +  +K  G  P  +TYN L+  + +     K+  A  V +
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRAD---KLDTAQLVHR 265

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
           +M E G+  +E T        CK      A+ + E+          + YN +I+GLC   
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEAS 322

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
             +EA+   + M ++   PNV T   L+ G   KK + + + +   +  +G  PS   +N
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG------VRNIM 422
           +L+ AYCK      A+ +   M      P    YN LI  +   G + G           
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           NE+++ G     V        LC  GK +KA  ++ EM         P+  TY+ +I   
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM---GNGFVPDTSTYSEVIGFL 499

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           C   ++E+A  L  E+   G++P+  TY I+ +   + G I
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 230/504 (45%), Gaps = 51/504 (10%)

Query: 11  DITELIRNH----HWSKLKNTDPNTVILQ----LFNSDADPVLILRYFCWSTKELRASHS 62
           D   ++ +H     WSKL          +    L  +  D VL L +F W   +  +SH+
Sbjct: 55  DFVNVVHSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHT 114

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI-IIDM 121
           L     +LH L   +K+    S L   +++      S +F +L   S  LC +S  + D+
Sbjct: 115 LETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESL-LYSYRLCDSSPHVFDL 173

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L   +    K     + F R  DYG   +V SCN  L +L+   + +     Y+EM+R R
Sbjct: 174 LFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSR 233

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I                                    P   T N++I   CK   +G++ 
Sbjct: 234 I-----------------------------------YPNSYTLNLVICACCK---LGRLD 255

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           KA+ VF++M   G  PN  ++NTLI G+C    +S+AMK+   M  +G+   VVT+N+L+
Sbjct: 256 KANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLV 315

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NG C  GKL EA  L  EM    L P  VT N LING+ K    E    LF+++S   + 
Sbjct: 316 NGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVK 375

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             ++TYN LI   CKEG+ + A  +   + ++G++P+ ST++ LI G   +   E    I
Sbjct: 376 ADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQI 435

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
              ++ +       T+ +L+   C++     AV LL+EM    K    P++     L  G
Sbjct: 436 YKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA---PDVNNLYELCAG 492

Query: 482 FCQKGKLEDANGLLNELLEKGLIP 505
             Q GK++ A  L +EL  + L+P
Sbjct: 493 LGQCGKVKTAMMLCSELEAQRLLP 516



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 163/342 (47%), Gaps = 15/342 (4%)

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           FE + Y Y     R  + +   F+ +        K   ASD    MK  G  P V + N 
Sbjct: 154 FESLLYSY-----RLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNA 208

Query: 227 LIDGYC--KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
            +       +G I     A A +++M  + I PN  T N +I   CK   +  A  VFEE
Sbjct: 209 YLSSLLNFSRGDI-----ALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEE 263

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           MG+ G +  V +YN+LI G C  G L  A+ LR  M  +G+ P+VVT N L+NGFCK   
Sbjct: 264 MGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGK 323

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +++A  LF ++    LSP+ +TYN LI+ Y K G  E    +   M    V  D+ TYN 
Sbjct: 324 LQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNA 383

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           LI GL +EG  +    ++ EL   G+     T++ L+   C   +S++A  +   M K  
Sbjct: 384 LILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIK-- 441

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
                P   T+ +L+  FC+    + A  LL E+L +   P+
Sbjct: 442 -SSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPD 482



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 32/369 (8%)

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM----KSLGVSPKVVTYNILIDGYCK 233
           KRR+ +    S   +L  + ++  ++  S + E +    +    SP V  +++L   +  
Sbjct: 127 KRRKFK----SAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHV--FDLLFKTF-- 178

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
              + K   A   F  M + G LP   + N  +           A+  + EM    I   
Sbjct: 179 -AHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPN 237

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             T N +I   C  G+LD+A  + +EM   G  PNV + N LI G+C K L+  A  L  
Sbjct: 238 SYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRS 297

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + G+ P V+T+NTL++ +CK G++++A  +   M    + P   TYN LI G S+ G
Sbjct: 298 VMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAG 357

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
           N E    +  E+    ++A ++TYN L+  LCK+GK+KKA  L+ E+   +++   PN  
Sbjct: 358 NCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVREL---DEKGLVPNAS 414

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEM 517
           T++ LI G C + + E A  +   +++    P   T+++                + EEM
Sbjct: 415 TFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEM 474

Query: 518 MEKGFIPDI 526
           + +   PD+
Sbjct: 475 LNRHKAPDV 483


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 199/385 (51%), Gaps = 6/385 (1%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ K H     + +  + G+K S+++C+ LL    ++G  ++   +Y EM  +    N  
Sbjct: 410 KHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEV 469

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  ++ G  K    +KA  ++ +M   GVS    TYNILI+G C    + ++ + D + 
Sbjct: 470 TYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCM---VDRVCEVDEML 526

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K  V  G +P  +T+N++I+GF K   + +A+ ++ +M   GI   +VTY S I+G C  
Sbjct: 527 KRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRT 586

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
              D AV L   M  +G+ P++   NA IN FCK+  +  A      + + GL+P+V  Y
Sbjct: 587 NCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVY 646

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           N+ +  Y     M +A     SM+ + +  D   Y  LI G S+ GNV     + +E++ 
Sbjct: 647 NSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLA 706

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
           N       T+  L   LC+ G    A  LLD+M +++     PN VTYN+LI    + GK
Sbjct: 707 NHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDV---CPNTVTYNMLINAHIRDGK 763

Query: 488 LEDANGLLNELLEKGLIPNQTTYQI 512
           L++A  L +++L  G++P+ TTY I
Sbjct: 764 LQEAFQLHDKMLSSGVVPDDTTYNI 788



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 172/333 (51%), Gaps = 6/333 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   + ++   L++  +K+  F+    +  EM +  +     ++N ++NGLC   ++ + 
Sbjct: 463 GFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEV 522

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++++   S G  P  +TYN +I+G+ K G +G    A A+++ M E GI PN VT+ + 
Sbjct: 523 DEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGS---ALAMYRQMCEKGITPNIVTYTSF 579

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG+C+      A+K+   M  +GI   +  YN+ IN  C  G +  A+     ++  GL
Sbjct: 580 IDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGL 639

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV   N+ + G+   K++ +A   +  + +Q ++     Y TLID + K G +  A  
Sbjct: 640 TPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALE 699

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + ML    +PD  T+  L  GL R G+++G + +++++    +    VTYN+L+ A  
Sbjct: 700 LYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHI 759

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
           +DGK ++A  L D   KM      P+  TYN+ 
Sbjct: 760 RDGKLQEAFQLHD---KMLSSGVVPDDTTYNIF 789



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 205/439 (46%), Gaps = 60/439 (13%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL  S    N +++ L++  ++ED   ++  +    +  ++ ++  +++ L K  K+++A
Sbjct: 359 GLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEA 417

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++ + MK  GV P +VT + L+ GYC+KG + +  K   ++ +M   G  PNEVT+ TL
Sbjct: 418 VNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALK---LYSEMPGKGFPPNEVTYTTL 474

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G+ K +    A  +  EM  +G++ G  TYN LINGLC+  ++ E   +    ++ G 
Sbjct: 475 MKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGF 534

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P  +T N++INGF K  ++  A  ++  + E+G++P+++TY + ID YC+    + A  
Sbjct: 535 VPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVK 594

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN------- 438
           +   M   G+ PD++ YN  I    ++GN+    + +  L+ +G+   +  YN       
Sbjct: 595 LLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYK 654

Query: 439 ----------------------------ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
                                        L+    K G    A+ L  EM         P
Sbjct: 655 NLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLA---NHNIP 711

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           +  T+  L  G C+ G ++ A  LL+++    + PN  TY +                + 
Sbjct: 712 DDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLH 771

Query: 515 EEMMEKGFIPDIEGHMYNI 533
           ++M+  G +PD     YNI
Sbjct: 772 DKMLSSGVVPD--DTTYNI 788



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 183/350 (52%), Gaps = 12/350 (3%)

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y  M  R +  +  S   +L    +      A  + ++M+  G       Y++++    +
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVM----R 196

Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
              +G+M+  DAV  F +M   G+ P+E  +   I G CK  +   A++V  +M   G+ 
Sbjct: 197 ACVVGRMH-GDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLK 255

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMM-ASGLKPNVVTSNALINGFCKKKLVEKARV 350
               TYNS+++ L   G++DEA+ L+D+M+ A+G K +V  +  L+ G+C    + KA  
Sbjct: 256 PRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALD 315

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           LFD+    G++P+ +TY  LI     EG  ++ + +   M+++G+LP    +N +I GL 
Sbjct: 316 LFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 375

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R    E    + + +V+ G+   + TY  L+  L K  K  +AV+L D   KM++    P
Sbjct: 376 RNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWD---KMKEAGVKP 431

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +IVT + L+ G+C+KG +++A  L +E+  KG  PN+ TY  + +  ++K
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKK 481



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 195/404 (48%), Gaps = 26/404 (6%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           + R    G+     S   LL A  +     D   ++ EM+ +    +   ++ V+   C 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CV 199

Query: 199 AGKLN-KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
            G+++  A  + ++M   GV P    Y I I G CK   +    +A  V   M E G+ P
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCK---LRDADRAVQVLGKMREAGLKP 256

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            + T+N+++D   K   +  A+++ ++M  + G    V    +L+ G C+ G++ +A+ L
Sbjct: 257 RDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDL 316

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DE +  G+ P  VT   LI G   + + ++   L   + EQGL PS   +N +I    +
Sbjct: 317 FDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 376

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
             + EDA A+ + ++D GV PDV TY CLI  LS+   V    N+ +++   G++  +VT
Sbjct: 377 NKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVT 435

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
            + L+   C+ G   +A+ L  EM     +   PN VTY  L+KG+ +K   + A  LLN
Sbjct: 436 CHSLLLGYCEKGCMDEALKLYSEM---PGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLN 492

Query: 497 ELLEKGLIPNQTTYQIV------------REEMMEK----GFIP 524
           E+ + G+   + TY I+             +EM+++    GF+P
Sbjct: 493 EMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVP 536



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 179/389 (46%), Gaps = 7/389 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM  Y  + +     + F  A   G+  + ++   L++    EG  ++   + ++M  + 
Sbjct: 300 LMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQG 359

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  +   FN V+ GL +  +   A  + + +   GV P V TY  LI    K     K++
Sbjct: 360 LLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHH---KVH 415

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  ++  M E G+ P+ VT ++L+ G+C+   +  A+K++ EM   G     VTY +L+
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLM 475

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            G       D+A AL +EM  +G+     T N LING C    V +   +      +G  
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+ +TYN++I+ + K G M  A AM   M ++G+ P++ TY   I G  R    +    +
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKL 595

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  +  NG+   +  YN  +   CK G    A+  L  +    K+   PN+  YN  + G
Sbjct: 596 LIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLL---KDGLTPNVTVYNSFVTG 652

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +     + +A+     ++++ +  +   Y
Sbjct: 653 YKNLKMMAEASKFYYSMIKQRIAADTEIY 681



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 177/396 (44%), Gaps = 24/396 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++RA V      D   ++ EM    ++ +   +   + GLCK    ++A  ++  M+  G
Sbjct: 194 VMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAG 253

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEVTFNTLIDGFCKDENI 275
           + P+  TYN ++D   K   +G+M +A  +   M+   G   +     TL+ G+C    I
Sbjct: 254 LKPRDFTYNSVVDVLVK---VGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEI 310

Query: 276 SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNAL 335
             A+ +F+E    G+    VTY  LI G   +G  DE   L  +M+  GL P+    N +
Sbjct: 311 GKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLV 370

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           I G  + K  E A  LFD + + G+ P V TY  LI    K  ++ +A  + + M + GV
Sbjct: 371 IKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGV 429

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            P + T + L+ G   +G ++    + +E+   G     VTY  L+    K     KA +
Sbjct: 430 KPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYA 489

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-- 513
           LL+EM    +        TYN+LI G C   ++ + + +L   + +G +P   TY  +  
Sbjct: 490 LLNEM---HQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIIN 546

Query: 514 --------------REEMMEKGFIPDIEGHMYNISG 535
                           +M EKG  P+I  +   I G
Sbjct: 547 GFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDG 582



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 32/321 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    LM  Y+K       +         G+     + N L+  L    +  +V+ + 
Sbjct: 467 NEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEML 526

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K            ++N ++NG  KAG +  A  +   M   G++P +VTY   IDGYC+ 
Sbjct: 527 KRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRT 586

Query: 235 ---------------GGI-----------------GKMYKADAVFKDMVENGILPNEVTF 262
                           GI                 G M  A      ++++G+ PN   +
Sbjct: 587 NCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVY 646

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N+ + G+   + ++ A K +  M    IAA    Y +LI+G    G +  A+ L  EM+A
Sbjct: 647 NSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLA 706

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +   P+  T  AL +G C+   ++ A+ L DD++   + P+ +TYN LI+A+ ++G++++
Sbjct: 707 NHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQE 766

Query: 383 AFAMRNSMLDRGVLPDVSTYN 403
           AF + + ML  GV+PD +TYN
Sbjct: 767 AFQLHDKMLSSGVVPDDTTYN 787


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 194/379 (51%), Gaps = 10/379 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  SV++ N ++ A  + G  ++    YK M    +  +  + + +L GL K G+L +A
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEA 542

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            D++  M   G+    V + +L+DGY K   +G    A +++ +M   GI P+ + F+  
Sbjct: 543 RDLLYKMIDKGLPVNKVAFTVLLDGYFK---VGDTAGAHSLWYEMEARGICPDAIAFSAF 599

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           IDG  K   +  A + F EM   G       YNSLI+GLC  GKL EA+ L  EM   GL
Sbjct: 600 IDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL 659

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P++ T+N +INGFCK+  ++ A   F ++   G++P  +TYNTLI  YCK   M  A  
Sbjct: 660 LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADE 719

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
             N M   G  PD++TYN  I G      +     +++EL+  G+    VTYN ++ A+C
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA---NGLLNELLEKG 502
            D    +A+ L  ++ KM      PN+VT NVL+  FC++G  E A      LN+LL   
Sbjct: 780 TD-MLDRAMVLTAKLLKMAFV---PNVVTTNVLLSHFCKQGMPEKALIWGQKLNKLLRAD 835

Query: 503 LIPNQTTYQIVREEMMEKG 521
            I     Y +  ++    G
Sbjct: 836 FIGYWLVYILSMDKQATAG 854



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 213/460 (46%), Gaps = 57/460 (12%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
           I++ LM  ++ +   +   E   R  + G++ S  + + L R L++ G +  V  + + M
Sbjct: 210 ILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGM 269

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
            R        +FN ++   C+ G L  A  ++  M      P V  YNILI+ Y  +G  
Sbjct: 270 IRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRG-- 327

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            +   A      M++NG  P+ +TF+T+I  FC + N+  A K+FE +   G++  V  Y
Sbjct: 328 -RTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING------------------- 338
           N+L++G      + +A  L +EM   G+ P+  T N L+ G                   
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 339 ----------------FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
                            C    +++A    +D+ E+G+ PSV+ +N++I AY + G  ++
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      ML  G++P  ST + ++ GLS++G ++  R+++ ++++ G+    V + +L+ 
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              K G +  A SL    ++ME     P+ + ++  I G  + G +E+A    +E+ +KG
Sbjct: 567 GYFKVGDTAGAHSL---WYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKG 623

Query: 503 LIPNQTTYQI----------------VREEMMEKGFIPDI 526
            +PN   Y                  +  EM +KG +PDI
Sbjct: 624 FVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDI 663



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 198/428 (46%), Gaps = 24/428 (5%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
           FLH+ +KNG   S+ T     ST   + C    +++                + F+   +
Sbjct: 335 FLHLMIKNGCKPSLIT----FSTIITAFCNEGNVVE--------------ARKIFEGIQE 376

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL  +V   N L+    K         +Y+EM+ + I  +  +FN ++ G  K GK   
Sbjct: 377 VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEAD 436

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
           + ++  D     + P    Y++ + G C  G   ++ +A    +DM+E G+ P+ V FN+
Sbjct: 437 SYELFRDWSLSSLVPDCSLYDVSVAGLCWAG---QLDEAMQFLEDMLEKGMPPSVVAFNS 493

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +I  + +      A K ++ M   G+     T +S++ GL   G+L EA  L  +M+  G
Sbjct: 494 VIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKG 553

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L  N V    L++G+ K      A  L+ ++  +G+ P  I ++  ID   K G +E+A+
Sbjct: 554 LPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAY 613

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              + M  +G +P+   YN LI GL   G +     +  E+   G+   + T NI++   
Sbjct: 614 EAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGF 673

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK+G+ K A     EM  +      P+ VTYN LI G+C+   +  A+  LN++   G  
Sbjct: 674 CKEGRMKSAFDAFAEMHHIGVT---PDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWD 730

Query: 505 PNQTTYQI 512
           P+ TTY I
Sbjct: 731 PDITTYNI 738



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 177/364 (48%), Gaps = 8/364 (2%)

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           VE+++      + E +    N ++ G   +    ++ +I+  M+ +GV P     +IL  
Sbjct: 194 VEFMWAN--HHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFR 251

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
              + G  G ++K   + + M+ +G  P    FN +I  FC+   +  A  +   M    
Sbjct: 252 LLLRVGDYGSVWK---LLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFC 308

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               V  YN LIN   + G+  +A+     M+ +G KP+++T + +I  FC +  V +AR
Sbjct: 309 CEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +F+ I E GLSP+V  YNTL+  Y K   +  A  +   M D+G+ PD +T+N L+AG 
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G       +  +   + +      Y++ V  LC  G+  +A+  L++M  +EK    
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDM--LEKGMP- 485

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
           P++V +N +I  + + G  ++A+     +L  GL+P+ +T   +   + +KG + +    
Sbjct: 486 PSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDL 545

Query: 530 MYNI 533
           +Y +
Sbjct: 546 LYKM 549


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 216/425 (50%), Gaps = 45/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFE---DVEYVYKEMKRRRIELNLDSFNFVLNG 195
            +R  + G K  + S   LL+ L  +   +   D+ ++  + K R   L++ ++  V+NG
Sbjct: 159 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR-CPLDVVAYTTVING 217

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L + G+L+KA  + + M   G SP VVTY+ +I    K      M KA  VF  MV+NG+
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA---MDKATQVFTRMVKNGV 274

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +P+ + + +L+ G+C       A+ +F++M  HG+   VVTY +L++ LC +GK  EA  
Sbjct: 275 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 334

Query: 316 LRDEMMASGLKPNVVTSNALINGFC----------------------------------- 340
           + D ++  G KP+  T   L++G+                                    
Sbjct: 335 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 394

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   V++A ++F ++ +QGL+P ++ Y T++D  C  GR++DA +  NS+   G+ P++ 
Sbjct: 395 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 454

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            +  LI GL      + V  +  E+++ G+    + +N ++G LCK G+  +A +L D M
Sbjct: 455 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 514

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            ++  E   PN  TYN LI G+C  GK+++A  LL  ++  G+ P+  TY  +     + 
Sbjct: 515 VRIGIE---PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 571

Query: 521 GFIPD 525
           G I D
Sbjct: 572 GRIED 576



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 112 LCRNSIIIDMLML-----AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
           + +N ++ D +M       Y  + KP      FK+   +G++  V++   L+  L K GK
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
             +   ++  + +R  + +  ++  +L+G    G L +  D+++ M   G+      +N+
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           ++  Y K     K+ +A  VF +M + G+ P+ V + T++D  C    +  A+  F  + 
Sbjct: 389 IMGAYAKHN---KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
           S G+A  +V + +LI+GLC   K D+   L  EM+  G+  + +  NA++   CKK  V 
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
           +A+ LFD +   G+ P+  TYNTLID YC +G+M++A  +   M+  GV P   TYN +I
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 565

Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
            G S+ G +E    ++ E+   G+  G+VTY +L+  L + G++  A  L   M K +
Sbjct: 566 NGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 623



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 161/313 (51%), Gaps = 7/313 (2%)

Query: 196 LCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LC AG      DI +  M  LG  P + +Y IL+ G C      +      +  D    G
Sbjct: 145 LCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD--HKG 202

Query: 255 ILP-NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
             P + V + T+I+G  ++  +  A  +F+ M   G +  VVTY+S+I+ L     +D+A
Sbjct: 203 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 262

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
             +   M+ +G+ P+ +   +L++G+C     ++A  +F  +   G+ P V+TY  L+D 
Sbjct: 263 TQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDY 322

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK G+  +A  + +S++ RG  PD +TY  L+ G + EG +  + ++++ ++  GM+ G
Sbjct: 323 LCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLG 382

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
              +N+++GA  K  K  +A+ +      M ++   P+IV Y  ++   C  G+++DA  
Sbjct: 383 HHIFNMIMGAYAKHNKVDEALLVFSN---MRQQGLNPDIVNYGTVLDILCTAGRVDDALS 439

Query: 494 LLNELLEKGLIPN 506
             N L  +GL PN
Sbjct: 440 QFNSLKSEGLAPN 452



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM---GSHGIAAGVVTYNS 299
           A  VF  +++ G   +    N  +    +  + + A+ +F  M   G+   A  + TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIATYGI 104

Query: 300 LINGLCVD-GKLDEAVALRDEMMASGL--------------------------------- 325
           +I G C   G+LD A A    ++ +GL                                 
Sbjct: 105 VI-GCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMP 163

Query: 326 ----KPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSP-SVITYNTLIDAYCKEGR 379
               KP++ +   L+ G C  K  ++A  L   +++ +G  P  V+ Y T+I+   +EG+
Sbjct: 164 ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQ 223

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ A+++ ++MLDRG  PDV TY+ +I+ LS+   ++    +   +V NG+    + Y  
Sbjct: 224 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 283

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           LV   C  GK K+A+ +  +M +   E   P++VTY  L+   C+ GK  +A  + + L+
Sbjct: 284 LVHGYCSSGKPKEAIGIFKKMCRHGVE---PDVVTYTALMDYLCKNGKSTEARKIFDSLV 340

Query: 500 EKGLIPNQTTY 510
           ++G  P+ TTY
Sbjct: 341 KRGHKPDSTTY 351



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)

Query: 351 LFDDISEQGLS---PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD-----VSTY 402
           LF+ +   G +   P++ TY  +I    + GR++ AFA    ++  G+  +      S+ 
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQ 142

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             L     R   ++ V   M EL   G +  L +Y IL+  LC D  S++A+ LL  M  
Sbjct: 143 GPLCTAGGRAMRMDIVLRRMPEL---GCKPDLFSYTILLKGLCDDKTSQQALDLLHIM-- 197

Query: 463 MEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + + + P ++V Y  +I G  ++G+L+ A  L + +L++G  P+  TY  +
Sbjct: 198 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 249


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 240/468 (51%), Gaps = 39/468 (8%)

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           +  F KN +      I+  + +    +  +S+++  ++   +K   P    E F  + + 
Sbjct: 387 IEWFCKNMEMEKAVEIYKRMKSVG--IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFET 444

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            +    + CN++   L K+GK +      + M+ + IE N+  +N ++   C+   ++ A
Sbjct: 445 WIAHGFM-CNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLA 503

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-----------IGKMYKADAVFKDMVENG 254
             I  +M   G+ P   TY+ILIDG+ K              I   ++A+ V  + + NG
Sbjct: 504 RSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIING 563

Query: 255 I------------LPNEV----------TFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           +            L N +          ++N++IDGF K+ +  +A++ + EM  +GI+ 
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISP 623

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VVT+ SLING C   ++D A+ +  EM +  LK +V    ALI+GFCKK  ++ A  LF
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLF 683

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++ E GL P+V  YN LI  +   G+M+ A  +   M++ G+  D+ TY  +I GL ++
Sbjct: 684 SELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           GN+    ++ +EL+  G+    + Y +LV  L K G+  +A  +L+E   M+K+   PN+
Sbjct: 744 GNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEE---MKKKDATPNV 800

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           + Y+ +I G  ++G L +A  + +E+LEKGL+ + T + ++    +EK
Sbjct: 801 LIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVEK 848



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 218/423 (51%), Gaps = 28/423 (6%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           + L  + ++  +++  + KNM+     E +KR    G+  S +  +++++  +K      
Sbjct: 374 EGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK------ 427

Query: 170 VEYVYKEMKRRRIELNLDSF-NFVLNG---------LCKAGKLNKASDIMEDMKSLGVSP 219
                 E     +E+  DSF  ++ +G         LCK GK++ A+  +  M++ G+ P
Sbjct: 428 -----AESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEP 482

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
            VV YN ++  +C+   +  M  A ++F +M+E G+ PN  T++ LIDGF K+++   A 
Sbjct: 483 NVVFYNNMMLAHCR---MKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAW 539

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS-NALING 338
           +V  +M +    A  V YN++INGLC  G+  +A  +   ++         TS N++I+G
Sbjct: 540 EVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDG 599

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           F K+   + A   + ++SE G+SP+V+T+ +LI+ +CK  RM+ A  M + M  + +  D
Sbjct: 600 FFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLD 659

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           V  Y  LI G  ++ +++    + +EL+  G+   +  YN L+      GK   A+ L  
Sbjct: 660 VPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYK 719

Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
              KM  +    ++ TY  +I G  + G L  A+ L +ELL  G++P++  Y ++   + 
Sbjct: 720 ---KMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLS 776

Query: 519 EKG 521
           +KG
Sbjct: 777 KKG 779



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 221/489 (45%), Gaps = 40/489 (8%)

Query: 26  NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF 85
           + D   VI  L     DPV  L+Y  W  K LR   SL   G +   L+           
Sbjct: 76  HVDDAHVIEVLLGRRNDPVSALQYCNW-VKPLR---SLCEGGDVFWVLI----------- 120

Query: 86  LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
            H+      F+S  T   A +     +  N  +I   M+  + +      FE   RA +Y
Sbjct: 121 -HIL-----FSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNY 174

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
                      LL A ++  + +     +  M  R +   +   N VL+ L ++  +++A
Sbjct: 175 -----------LLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +I   M  +GV+   VT  +L+    ++    K  +A  +F+ ++  G  P+ + F+  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRER---KPEEAMKIFRRVMSRGAEPDGLLFSLA 280

Query: 266 IDGFCKDENISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +   CK +++  A+ +  EM   G + A   TY S+I     +G ++EAV ++DEM+  G
Sbjct: 281 VQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFG 340

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +  +V+ + +LI GFC    + KA   F+ + E+GL+P  + ++ +I+ +CK   ME A 
Sbjct: 341 IPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAV 400

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M   G+ P     + +I G  +  + E    I N+     +  G +   I +  L
Sbjct: 401 EIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFL-LL 459

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK GK   A S L     ME +   PN+V YN ++   C+   ++ A  + +E+LEKGL 
Sbjct: 460 CKQGKVDAATSFLR---MMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQ 516

Query: 505 PNQTTYQIV 513
           PN  TY I+
Sbjct: 517 PNNFTYSIL 525



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 41/406 (10%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           +  K GK  + ++    +   +  +  N +  + +MLA+ +     L    F    + GL
Sbjct: 458 LLCKQGKVDAATSFLRMME--NKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +  + + L+    K    ++   V  +M     E N   +N ++NGLCK G+ +KA +
Sbjct: 516 QPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKE 575

Query: 208 IMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           +++++ K    S    +YN +IDG+ K+G      +A   +++M ENGI PN VTF +LI
Sbjct: 576 MLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEA---YREMSENGISPNVVTFTSLI 632

Query: 267 -----------------------------------DGFCKDENISAAMKVFEEMGSHGIA 291
                                              DGFCK  ++  A  +F E+   G+ 
Sbjct: 633 NGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLM 692

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             V  YN+LI+G    GK+D A+ L  +M+  G+  ++ T   +I+G  K   +  A  L
Sbjct: 693 PNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDL 752

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           + ++   G+ P  I Y  L++   K+G+   A  M   M  +   P+V  Y+ +IAG  R
Sbjct: 753 YSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHR 812

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           EGN+     + +E++  G+      +N+LV    +   +   +S L
Sbjct: 813 EGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVEKPPAAAKISSL 858



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 107/221 (48%), Gaps = 4/221 (1%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            +N L+N    + ++D AV   + M+   + P V   N +++   +  L+++A+ +++ +
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              G++   +T   L+ A  +E + E+A  +   ++ RG  PD   ++  +    +  ++
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 416 EGVRNIMNELVNNG-MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
               +++ E+   G + A   TY  ++ A  K+G  ++AV + DEM          +++ 
Sbjct: 291 VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPM---SVIA 347

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
              LI GFC   +L  A    N + E+GL P++  + ++ E
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIE 388


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 244/503 (48%), Gaps = 65/503 (12%)

Query: 73  LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
           L+ A+ + +  S L      G F+  +     L   S     N ++ ++L+ AYVK  K 
Sbjct: 111 LIQAQMHSQAMSVLRRLAVMG-FSCTAIFTSLLRIISRFDSTNHVVFELLVKAYVKERKV 169

Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                A     D G K+S ++CN +LRALV++G+ + V    +E       L++ + N +
Sbjct: 170 LDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNIL 229

Query: 193 LNGLCKAGKLNKASD----------------------------------IMEDMKSLGVS 218
           LN LC  G+  KA D                                  ++EDM+   + 
Sbjct: 230 LNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIP 289

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
             + TYNI+ID  C+   I +  +A  + K M ++ ++P+E T+NTLI+GF  +  I+ A
Sbjct: 290 ADIYTYNIMIDKLCR---IKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHA 346

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE------------------- 319
             VF  M        V TY ++I+G C + ++D+A+++  E                   
Sbjct: 347 HYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILK 406

Query: 320 -MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            M+  G+ P++VT +ALIN    + ++ +A      +S   +S   +++N +ID+YC  G
Sbjct: 407 SMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRG 462

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
            + +AF + ++M+  G  P+V TY  L+ GL + G++   +  M  L++        T+N
Sbjct: 463 NIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFN 522

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
            L+  +CK G   +A+ L +   KM K    P+I TY +L+ GFC+KGK+  A  +L  +
Sbjct: 523 ALLLGICKYGTLDEALDLCE---KMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMM 579

Query: 499 LEKGLIPNQTTYQIVREEMMEKG 521
           L+KG++P+   Y  +   ++ +G
Sbjct: 580 LDKGVVPDTVAYTCLLNGLINEG 602



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 198/385 (51%), Gaps = 7/385 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK-RRRIELNLDSFNFVLNGLCKAGKL 202
           D G+    ++   LL  L+ EG+ +   YV++E+  +  +  +  ++N ++NG  K G +
Sbjct: 581 DKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNI 640

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           N    +M DM    V P   +YNIL+ GY K G   +  K+  ++K MV  GI P+ VT+
Sbjct: 641 NTIKRMMSDMYQSEVYPNSASYNILMHGYVKGG---QFSKSLYLYKYMVRKGIRPDNVTY 697

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
             LI G  +   I  A+K  E+M   GI    + ++ LI       K+  A+ L + M  
Sbjct: 698 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKW 757

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             + P+  T +A+ING  +K  ++++  +  ++ + GL P+   Y  L++A C+ G+++ 
Sbjct: 758 LRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDR 817

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           AF ++  M   G++P     + +I GL + G +E    + + ++ +GM   + T+  L+ 
Sbjct: 818 AFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMH 877

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK+ K   A+ L      ME  +   ++V+YNVLI G C+  ++ DA  L  E+  KG
Sbjct: 878 CLCKESKIADALHLKR---LMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKG 934

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIE 527
           L PN TTY  +   M   G + + E
Sbjct: 935 LWPNVTTYITLTGAMYSTGIMQNGE 959



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 186/380 (48%), Gaps = 12/380 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            L+  +  G+  + S +F  +  C + L  + I  + LM  Y+K           KR   
Sbjct: 594 LLNGLINEGQVKAASYVFQEI-ICKEGLYADCIAYNSLMNGYLKGG----NINTIKRMMS 648

Query: 145 YGLKSSVL----SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
              +S V     S N L+   VK G+F    Y+YK M R+ I  +  ++  ++ GL + G
Sbjct: 649 DMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECG 708

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
            ++ A   +E M   G+ P  + ++ILI  + +K    KM+ A  +F  M    + P+  
Sbjct: 709 LIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS---KMHNALQLFNCMKWLRMSPSSK 765

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T++ +I+G  +   +  + +V  EM   G+      Y +L+N  C  GK+D A  L++EM
Sbjct: 766 TYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEM 825

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            A G+ P  V  +++I G CK   +E+A ++F  +   G+ P+V T+ TL+   CKE ++
Sbjct: 826 KALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKI 885

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
            DA  ++  M    +  DV +YN LI GL ++  +    ++  E+ + G+   + TY  L
Sbjct: 886 ADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITL 945

Query: 441 VGALCKDGKSKKAVSLLDEM 460
            GA+   G  +    LL+++
Sbjct: 946 TGAMYSTGIMQNGEELLEDI 965



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 9/274 (3%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           + ++ D+L+ A+ +  K H   + F       +  S  + + ++  L+++   +    V 
Sbjct: 728 DRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVL 787

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM +  ++ N   +  ++N  C+ GK+++A  + E+MK+LG+ P  V  + +I G CK 
Sbjct: 788 REMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCK- 846

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              GK+ +A  VF  M+ +G++P   TF TL+   CK+  I+ A+ +   M S  +   V
Sbjct: 847 --CGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDV 904

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           V+YN LI GLC D ++ +A+ L +EM + GL PNV T   L        +++    L +D
Sbjct: 905 VSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLED 964

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           I E+GL P  +    L      E +MEDA    N
Sbjct: 965 IEERGLIPVYVQLENL------ERQMEDAIRRLN 992



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 171/333 (51%), Gaps = 8/333 (2%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
           R++  +  ++ YP   S+   +H +VK G+F+    ++  +      +  +++   +L+L
Sbjct: 645 RMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYM--VRKGIRPDNVTYRLLIL 702

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
              +     +  +  ++    G+    L  + L+ A  ++ K  +   ++  MK  R+  
Sbjct: 703 GLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSP 762

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           +  +++ ++NGL +   L+++ +++ +M  +G+ P    Y  L++  C+ G I + ++  
Sbjct: 763 SSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLK 822

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              K +   GI+P +V  +++I G CK   +  A+ VF  M   G+   V T+ +L++ L
Sbjct: 823 EEMKAL---GIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCL 879

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C + K+ +A+ L+  M +  LK +VV+ N LI G CK K +  A  L++++  +GL P+V
Sbjct: 880 CKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNV 939

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            TY TL  A    G M++   +   + +RG++P
Sbjct: 940 TTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/616 (26%), Positives = 261/616 (42%), Gaps = 130/616 (21%)

Query: 9   IEDITELIRNH-HWSKLKNT------DPNTVILQ-LFNSDADPVLILRYFCWSTKELRAS 60
           ++DI +++  H HW K   T       P + I   +F+   DP L L+ F W++K  R+ 
Sbjct: 35  VKDIIQILSTHPHWEKSLETRFSDCETPVSGIAHFVFDRIRDPGLGLKLFEWASK--RSD 92

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
            + LL G    SL            L +  +   F  V  +   +  C D L      + 
Sbjct: 93  FNDLLDGFSCSSL------------LKLLARCRVFVEVENLLETMK-CKD-LAPTREALS 138

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            ++ AYV +   +   E +  A D +     V++CN LL AL+++ K E    VY+EM +
Sbjct: 139 FVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVK 198

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R    +  S   ++ GLCK  K+ +   ++ D    G  P +V YN L+DGY K+G + +
Sbjct: 199 RDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVER 258

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV----- 294
              A+ +FK++   G LP   T+  +I+G CK  N  A   +  EM   G+   V     
Sbjct: 259 ---ANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNS 315

Query: 295 ------------------------------VTYNSLINGLCVDGKLDEAVALRDEMMASG 324
                                          TYN+LI+G C DGK+ EA  L +  +  G
Sbjct: 316 IVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRG 375

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           L PN ++   LI+ +CK+    +A  LF  ++E+G    ++ Y  L+      G ++ A 
Sbjct: 376 LSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVAL 435

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN---------------- 428
            +R+ M++RGVLPD + YN L+ GL ++G +   + ++ E+++                 
Sbjct: 436 TVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGF 495

Query: 429 -------------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------- 460
                              GM  G+V YN ++   CK G    A++ +  M         
Sbjct: 496 IRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDE 555

Query: 461 -----------------------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                                   +M K+K  PN+VTY  LI GFC+ G    A     E
Sbjct: 556 FTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEE 615

Query: 498 LLEKGLIPNQTTYQIV 513
           +   GL PN  TY I+
Sbjct: 616 MRSSGLKPNVVTYTIL 631



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G+  +V   N ++ A +K G   +V    + +     E ++ ++N +++G C+ GK++
Sbjct: 303 ERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVH 362

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A +++E     G+SP  ++Y  LI  YCK+G   K  +A  +F  M E G   + V + 
Sbjct: 363 EAEELLEHAIKRGLSPNKLSYTPLIHVYCKQG---KCLRAFDLFIGMTEKGHPLDLVAYG 419

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            L+ G      +  A+ V ++M   G+      YN L+NGLC  G+L  A  L  EM+  
Sbjct: 420 ALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ 479

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
            L  +   S  L++GF +   +++A+ LF+    +G+ P V+ YN +I  YCK G M DA
Sbjct: 480 NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDA 539

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
                 M D    PD  TY+ +I G  ++ ++     +  ++V    +  +VTY  L+  
Sbjct: 540 LTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLING 599

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C+ G S +A    +EM         PN+VTY +LI  FC++GK+  A      +L    
Sbjct: 600 FCRTGDSSRAEKTFEEM---RSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRC 656

Query: 504 IPNQTTY 510
           IPN  T+
Sbjct: 657 IPNDVTF 663



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 187/391 (47%), Gaps = 22/391 (5%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    L+  Y K  K    F+ F    + G    +++   L+  LV  G+ +   
Sbjct: 376 LSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVAL 435

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V  +M  R +  + + +N ++NGLCK G+L+ A  ++ +M    +S        L+DG+
Sbjct: 436 TVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGF 495

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
            + G   K+ +A  +F+  +  G+ P  V +N +I G+CK   ++ A+   + M     +
Sbjct: 496 IRHG---KLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHS 552

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
               TY+++I+G      L  A+ L  +M+    KPNVVT  +LINGFC+     +A   
Sbjct: 553 PDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKT 612

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F+++   GL P+V+TY  LI  +CKEG++  A +    ML    +P+  T+N LI GL+ 
Sbjct: 613 FEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLT- 671

Query: 412 EGNVEGVRNIMNE---------------LVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
                 V N  NE               ++++G    +  YN ++  LC       A+ L
Sbjct: 672 NNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQL 731

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            D   KM  +  +P+ V++  L+ G C +G+
Sbjct: 732 RD---KMTGKGIFPDPVSFAALVYGLCLEGR 759



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 194/396 (48%), Gaps = 14/396 (3%)

Query: 132 PHLGFEAFKRAG---DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           P LG + F+ A    D+       SC+ LL+ L +   F +VE + + MK + +    ++
Sbjct: 77  PGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREA 136

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSL-GVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
            +FV+     +G +N+A ++      +    P V+  N L++   ++    K+  A  V+
Sbjct: 137 LSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQK---KVEIARKVY 193

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++MV+     +  +   ++ G CK+  +    K+  +    G    +V YN+L++G    
Sbjct: 194 EEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKR 253

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G ++ A  L  E+   G  P   T   +ING CKK   +    L  ++ E+G+  +V  Y
Sbjct: 254 GDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVY 313

Query: 368 NTLIDAYCKEG-RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           N+++DA  K G ++E    +R  + + G  PD++TYN LI+G  R+G V     ++   +
Sbjct: 314 NSIVDAQIKHGCKIEVGKTLR-WITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAI 372

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQK 485
             G+    ++Y  L+   CK GK  +A  L   M     EK  P ++V Y  L+ G    
Sbjct: 373 KRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGM----TEKGHPLDLVAYGALVHGLVAA 428

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G+++ A  + ++++E+G++P+   Y ++   + +KG
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKG 464



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 185/404 (45%), Gaps = 47/404 (11%)

Query: 46  ILRYFCWSTKELRA----------SHSLLLT--GRLLHSLVVAKKYPKIRSFLHMFVKNG 93
           ++  +C   K LRA           H L L   G L+H LV A +     +     V+ G
Sbjct: 386 LIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERG 445

Query: 94  KFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
                + +++ L    + LC+   +     L  V+ +  +L  +AF  A           
Sbjct: 446 VLPD-ANVYNVLM---NGLCKKGRL-SAAKLLLVEMLHQNLSLDAFVSA----------- 489

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
              L+   ++ GK ++ + +++    + ++  +  +N ++ G CK G +N A   ++ MK
Sbjct: 490 --TLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMK 547

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
               SP   TY+ +IDGY K+     ++ A  +F  MV+    PN VT+ +LI+GFC+  
Sbjct: 548 DGDHSPDEFTYSTIIDGYVKQN---DLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
           + S A K FEEM S G+   VVTY  LI   C +GK+ +A +  + M+ +   PN VT N
Sbjct: 605 DSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFN 664

Query: 334 ALINGF-----------CKKKLVEKARVLFD---DISEQGLSPSVITYNTLIDAYCKEGR 379
            LING              + L  KA ++ D    +   G    V  YN+++   C    
Sbjct: 665 YLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKM 724

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +  A  +R+ M  +G+ PD  ++  L+ GL  EG  +  +N ++
Sbjct: 725 VNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTIS 768



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 23/211 (10%)

Query: 333 NALINGF-CKK--KLVEKARV------LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           N L++GF C    KL+ + RV      L + +  + L+P+    + ++ AY   G +  A
Sbjct: 94  NDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRA 153

Query: 384 FAMRNSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
             + +   D    LPDV   N L+  L ++  VE  R +  E+V         +  I+V 
Sbjct: 154 LELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVR 213

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKW-----PNIVTYNVLIKGFCQKGKLEDANGLLNE 497
            LCK+ K ++   L+++        +W     PNIV YN L+ G+ ++G +E ANGL  E
Sbjct: 214 GLCKERKVEEGRKLIND--------RWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKE 265

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           L  KG +P   TY I+   + +K     ++G
Sbjct: 266 LKMKGFLPTTETYGIMINGLCKKCNFKAVDG 296


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 202/371 (54%), Gaps = 9/371 (2%)

Query: 132 PHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           P L      F++A D G  S   + + L+  LV+    E     Y++M      +N  S 
Sbjct: 52  PQLKNAVSVFQQAVDSG-SSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSL 110

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
           + +L    +  K   A  ++  M   G +  V  +NIL+ G C+    GK   A ++ ++
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLRE 167

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           M  N ++P+  ++NT+I GFC+ + +  A+++  EM   G +  +VT+  LI+  C  GK
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +DEA+    EM   GL+ ++V   +LI GFC    +++ + LFD++ E+G SP  ITYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI  +CK G++++A  +   M++RGV P+V TY  LI GL   G  +     +N ++   
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
                VTYNI++  LCKDG    AV +++    M+K +  P+ +TYN+L+ G C KG L+
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE---LMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 490 DANGLLNELLE 500
           +A+ LL  +L+
Sbjct: 405 EASKLLYLMLK 415



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 207/401 (51%), Gaps = 6/401 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM   V++    L F  +++  +     + +S + LL   V+  K      V   M +R 
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-M 240
              N+ + N +L GLC+  +  KA  ++ +M+   + P V +YN +I G+C+    GK +
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE----GKEL 193

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
            KA  +  +M  +G   + VT+  LID FCK   +  AM   +EM   G+ A +V Y SL
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I G C  G+LD   AL DE++  G  P  +T N LI GFCK   +++A  +F+ + E+G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P+V TY  LID  C  G+ ++A    N M+++   P+  TYN +I  L ++G V     
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           I+  +     R   +TYNIL+G LC  G   +A  LL  M K +     P++++YN LI 
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK-DSSYTDPDVISYNALIH 432

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           G C++ +L  A  + + L+EK    ++ T  I+    ++ G
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 208/441 (47%), Gaps = 37/441 (8%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N + +  L+  YV+  K    F         G   +V + N LL+ L +  +      + 
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +EM+R  +  ++ S+N V+ G C+  +L KA ++  +MK  G S  +VT+ ILID +CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
           G +                                G++ +  A+F +++E G  P  +T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           NTLI GFCK   +  A ++FE M   G+   V TY  LI+GLC  GK  EA+   + M+ 
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
              +PN VT N +IN  CK  LV  A  + + + ++   P  ITYN L+   C +G +++
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 383 AFAMRNSMLDRGVL--PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           A  +   ML       PDV +YN LI GL +E  +    +I + LV        VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + +  K G   KA+ L  +   +   K   N  TY  +I GFC+ G L  A GLL ++  
Sbjct: 466 LNSTLKAGDVNKAMELWKQ---ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 501 KGLIPNQTTYQIVREEMMEKG 521
             L P+   Y  +   + ++G
Sbjct: 523 SELQPSVFDYNCLLSSLCKEG 543



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 209/440 (47%), Gaps = 18/440 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +  F   G+      +F  +    DS C  +I  + L+  + K  +     E F+   
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPC--AITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + G++ +V +   L+  L   GK ++       M  +  E N  ++N ++N LCK G + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------ADAVFKDMVENGILP 257
            A +I+E MK     P  +TYNIL+ G C KG + +  K       D+ + D       P
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD-------P 422

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           + +++N LI G CK+  +  A+ +++ +     A   VT N L+N     G +++A+ L 
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            ++  S +  N  T  A+I+GFCK  ++  A+ L   +    L PSV  YN L+ + CKE
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G ++ A+ +   M      PDV ++N +I G  + G+++   +++  +   G+   L TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           + L+    K G   +A+S  D+M     E   P+    + ++K    +G+ +    L+ +
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFE---PDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 498 LLEKGLIPNQTTYQIVREEM 517
           L++K ++ ++     V + M
Sbjct: 660 LVDKDIVLDKELTCTVMDYM 679



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 317 RDEMMASGL-KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID--- 372
           RDE +   L  P V +   L+N F + +   K R L +D + Q L  +V  +   +D   
Sbjct: 15  RDEHVVRKLLNPRVYSK--LVNAFSETE--TKLRSLCEDSNPQ-LKNAVSVFQQAVDSGS 69

Query: 373 --AYCKEGRM---------EDAFAMRNSMLDRGVLPDVSTYNCLI---AGLSREGNVEGV 418
             A+     M         E AF+    ML+     +  + + L+     + + G   GV
Sbjct: 70  SLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +M   +  G    +  +NIL+  LC++ +  KAVSLL EM    +    P++ +YN +
Sbjct: 130 LALM---LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM---RRNSLMPDVFSYNTV 183

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           I+GFC+  +LE A  L NE+   G   +  T+ I+ +   + G + +  G +
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 209/416 (50%), Gaps = 27/416 (6%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           LM  Y K           +   +  ++  V++ N L + L++ GK+E      K +  R 
Sbjct: 522 LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP-----KSVFSRM 576

Query: 182 IELNLD----SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
           IEL L     ++N V+N     GK   A D++ +MKS GV P +VTYNILI G CK G I
Sbjct: 577 IELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAI 636

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
            K+    +V  +M+  G +P  +    L+  + +     A +++ +++   G+    + Y
Sbjct: 637 EKVI---SVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVY 693

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+LI  LC  G   +A  +  EM+  G+  ++VT NALI G+C    VEKA   +  +  
Sbjct: 694 NTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLV 753

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G+SP++ TYN L++     G M DA  + + M +RG++P+ +TYN L++G  R GN   
Sbjct: 754 SGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRD 813

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +  E++  G      TYN+L+    K GK ++A  LL+EM       + PN  TY+V
Sbjct: 814 SIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLT---RGRIPNSSTYDV 870

Query: 478 LIKGFCQKG---------KLE---DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           LI G+C+           KL    +A  LL E+ EKG +P+++T   +       G
Sbjct: 871 LICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPG 926



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 217/466 (46%), Gaps = 71/466 (15%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N +    ++  Y K    +   E  ++     +  +V     LL    + G+ E     Y
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           KEMK   +E N   F+ +LN L ++G + +A  +++D+ S G+   V  Y+ L+DGY K+
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKE 529

Query: 235 GG--------------------------------IGKMYKADAVFKDMVENGILPNEVTF 262
           G                                 +GK Y+  +VF  M+E G+ P+ VT+
Sbjct: 530 GNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTY 588

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N++++ +        A+ +  EM S+G+   +VTYN LI GLC  G +++ +++  EM+A
Sbjct: 589 NSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLA 648

Query: 323 SGLKP-----------------------------------NVVTSNALINGFCKKKLVEK 347
            G  P                                   N +  N LI   C+  + +K
Sbjct: 649 VGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKK 708

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A V+  ++  +G+S  ++TYN LI  YC    +E AF   + ML  G+ P+++TYN L+ 
Sbjct: 709 ANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLE 768

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GLS  G +     +++E+   G+     TYNILV    + G  + ++ L  EM     + 
Sbjct: 769 GLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMI---TKG 825

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             P   TYNVLI+ + + GK+  A  LLNE+L +G IPN +TY ++
Sbjct: 826 FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVL 871



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 217/447 (48%), Gaps = 52/447 (11%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F+      L  + ++   LL    K G  E  E V ++M++  +  N+ +F+ ++NG 
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGY 421

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI---- 237
            K G LNKA +++  M  + + P V  Y IL+DGY + G               G+    
Sbjct: 422 AKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENN 481

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G M +A ++ KD++  GI  +   +++L+DG+ K+ N SAA+ V +E
Sbjct: 482 IIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQE 541

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M    +   VV YN+L  GL   GK  E  ++   M+  GL P+ VT N+++N +  +  
Sbjct: 542 MTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGK 600

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
            E A  L +++   G+ P+++TYN LI   CK G +E   ++ + ML  G +P    +  
Sbjct: 601 TENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKF 660

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+   SR    + +  I  +LV+ G+    + YN L+  LC+ G +KKA  +L EM    
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI-- 718

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE--------- 515
            +    +IVTYN LI+G+C    +E A    +++L  G+ PN TTY  + E         
Sbjct: 719 -KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMR 777

Query: 516 -------EMMEKGFIPDIEGHMYNISG 535
                  EM E+G +P+   +   +SG
Sbjct: 778 DADKLVSEMRERGLVPNATTYNILVSG 804



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 223/467 (47%), Gaps = 36/467 (7%)

Query: 97  SVSTIFHALSTCSD-----SLCRNSII----IDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           SV+ + H+L    D        RNS+      + ++  + K      GF         G+
Sbjct: 47  SVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGV 106

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
               ++CN L++   + G  +  E++   +    + L+    N +++G C+ G +++A D
Sbjct: 107 CFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALD 166

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV------ENGIL----- 256
           ++ED    GV P +VTYN L++ +CK+G + K   A++V  +++      E+G+L     
Sbjct: 167 LVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAK---AESVVNEILGFRRDDESGVLNDCGV 223

Query: 257 ----------PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
                     P  VT+ TLI  +CK   I     ++E+M   G+   VVT +S++ GLC 
Sbjct: 224 ETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCR 283

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            GKL EA  L  EM   GL PN V+   +I+   K   V +A      +  +G+S  ++ 
Sbjct: 284 HGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVL 343

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
             T++D   K G+ ++A  M  ++L   ++P+  TY  L+ G  + G+VE    ++ ++ 
Sbjct: 344 CTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKME 403

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
              +   +VT++ ++    K G   KAV +L +M +M      PN+  Y +L+ G+ + G
Sbjct: 404 KEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQM---NIMPNVFVYAILLDGYFRTG 460

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           + E A G   E+   GL  N   + I+   +   G + + +  + +I
Sbjct: 461 QHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDI 507



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 214/419 (51%), Gaps = 23/419 (5%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ AY K+      F  +++    G+   V++C+ +L  L + GK  +   + +EM    
Sbjct: 242 LIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG 301

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           ++ N  S+  +++ L K+G++ +A +    M   G+S  +V    ++DG  K G   K  
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG---KSK 358

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A+ +F+ +++  ++PN VT+  L+DG CK  ++  A  V ++M    +   VVT++S+I
Sbjct: 359 EAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSII 418

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           NG    G L++AV +  +M+   + PNV     L++G+ +    E A   + ++   GL 
Sbjct: 419 NGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLE 478

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
            + I ++ L++   + G M++A ++   +L +G+  DV  Y+ L+ G  +EGN     ++
Sbjct: 479 ENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSV 538

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           + E+    M+  +V YN L   L + GK +   S+   M ++      P+ VTYN ++  
Sbjct: 539 VQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLT---PDCVTYNSVMNT 594

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIP 524
           +  +GK E+A  LLNE+   G++PN  TY I                V  EM+  G++P
Sbjct: 595 YFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVP 653



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 61/422 (14%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N LL      G    V+ +Y EM    +  N+ S N +++ LCK G L  A   + +   
Sbjct: 14  NDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVF 73

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
                  VTYN ++ G+CK+G   + +    +  +MV+ G+  + VT N L+ G+C+   
Sbjct: 74  -----DHVTYNTVVWGFCKRGLADQGF---GLLSEMVKKGVCFDSVTCNILVKGYCQIGL 125

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A  +   +   G+    +  N+L++G C  G +  A+ L ++   +G+KP++VT N 
Sbjct: 126 VQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNT 185

Query: 335 LINGFCKKKLVEKARVLFDDI------SEQG---------------LSPSVITYNTLIDA 373
           L+N FCK+  + KA  + ++I       E G               L P+V+T+ TLI A
Sbjct: 186 LVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAA 245

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK   ++D F++   M+  GV+PDV T + ++ GL R G +     ++ E+ N G+   
Sbjct: 246 YCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPN 305

Query: 434 LVTYNILVGALCKDGKSKKA-------------------VSLLDEMFKMEKEKKW----- 469
            V+Y  ++ AL K G+  +A                    +++D +FK  K K+      
Sbjct: 306 HVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQ 365

Query: 470 --------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
                   PN VTY  L+ G C+ G +E A  +L ++ ++ ++PN  T+  +     +KG
Sbjct: 366 TILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKG 425

Query: 522 FI 523
            +
Sbjct: 426 ML 427



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 24/211 (11%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           +N L+      G + +   L  EM+  G+ PNV + N L++  CK             + 
Sbjct: 13  WNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCK-------------VG 59

Query: 357 EQGLSPSV--------ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           + GL+           +TYNT++  +CK G  +  F + + M+ +GV  D  T N L+ G
Sbjct: 60  DLGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKG 119

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             + G V+    IM  LV  G+    +  N LV   C+ G   +A+ L+++ +K   +  
Sbjct: 120 YCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVK-- 177

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            P+IVTYN L+  FC++G L  A  ++NE+L
Sbjct: 178 -PDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 10/142 (7%)

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           ++P +  +N L+   +  G V  V+ + +E+V  G+   + + N+LV +LCK G    A+
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 455 SLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             L + +F         + VTYN ++ GFC++G  +   GLL+E+++KG+  +  T  I+
Sbjct: 66  GYLRNSVF---------DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNIL 116

Query: 514 REEMMEKGFIPDIEGHMYNISG 535
            +   + G +   E  M N+ G
Sbjct: 117 VKGYCQIGLVQYAEWIMGNLVG 138


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 232/445 (52%), Gaps = 9/445 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H +   G++   + +F  ++   + L  + +  + LM +  K+ +     E F    
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMT--REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G K  ++S + LL     EG+F D+  ++  M    I  +   FN ++N   K G ++
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  I  +M+  GVSP VVTY  +I   C+   +G++  A      M+  G+ PN V ++
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCR---MGRLADAMEKLSQMISIGLKPNTVVYH 521

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT-YNSLINGLCVDGKLDEAVALRDEMMA 322
           +LI GFC   ++  A ++  EM   GI    +T ++S+I+ LC +G++  A  + + ++ 
Sbjct: 522 SLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIH 581

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G +P++ T N+LI+G+C    ++KA  + D +   G  P V+TY+TLI+ Y K GR++D
Sbjct: 582 IGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDD 641

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
              +   ML + V P   TY+ ++ GL R G     + + +E++ +G    + TY I++ 
Sbjct: 642 GLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQ 701

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC++  + +A++L  ++  M  + +   I   N +I    +  + E+A+ L   +   G
Sbjct: 702 GLCRNNCTDEAITLFHKLGAMNLKFE---IAILNTMIHALYKVKRREEAHDLFASVSASG 758

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIE 527
           L+PN +TY ++   ++++G + + +
Sbjct: 759 LVPNASTYGVMIINLLKEGSVEEAD 783



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 209/404 (51%), Gaps = 9/404 (2%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF-EDVEYVYKEMKR 179
           +LM    +  +P LG   F R    GL++  +  N  L+ L    +  E +  +   M  
Sbjct: 170 ILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSE 229

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIG 238
                +  S+N V+  LC   +  +A D++  M K  G SP VV+Y ++I G   +G I 
Sbjct: 230 LGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEIS 289

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
           K   A  +F +MV+ G++PN VT+N+++   CK   +  A  V  +M  + I    VTY 
Sbjct: 290 K---ACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           ++I+G    G+  EA  +  EM   GL P++VT N+L++  CK K  ++A  +F  I+ +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           G  P +I+Y+ L+  Y  EGR  D   + +SM D G++ D   +N LI   ++ G ++  
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             I  E+   G+   +VTY  ++ ALC+ G+   A+  L +M  +  +   PN V Y+ L
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK---PNTVVYHSL 523

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKG 521
           I+GFC  G L  A  L++E++++G+  PN T +  +   +  +G
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 224/474 (47%), Gaps = 47/474 (9%)

Query: 67  GRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
             + HS+      P I S+   LH +   G+F  ++ +FH+++                 
Sbjct: 397 AEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT----------------- 439

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
                               D G+ +     N L+ A  K G  ++   ++ EM+ + + 
Sbjct: 440 --------------------DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            N+ ++  V+  LC+ G+L  A + +  M S+G+ P  V Y+ LI G+C  G    + KA
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG---DLIKA 536

Query: 244 DAVFKDMVENGI-LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
             +  +M++ GI  PN   F+++I   C +  +  A  VF  +   G    + T+NSLI+
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
           G C+ GK+D+A  + D M+++G +P+VVT + LING+ K   ++   +LF ++  + + P
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           + +TY+ ++D   + GR   A  M + M++ G    +STY  ++ GL R    +    + 
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLF 716

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           ++L    ++  +   N ++ AL K  + ++A  L      +      PN  TY V+I   
Sbjct: 717 HKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFAS---VSASGLVPNASTYGVMIINL 773

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGT 536
            ++G +E+A+ + + + + G  P+      +   +++KG I     +M  + GT
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGT 827



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 5/230 (2%)

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           EE G   +   V TY  L++  C   + D   A    ++ +GL+ + + +N  +   C  
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYA 213

Query: 343 KLVEKA-RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD-RGVLPDVS 400
           K  ++A  +L   +SE G  P   +YNT+I + C   R ++A  M   M    G  PDV 
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +Y  +I GL  EG +    N+ NE+V  G+   +VTYN +V ALCK     KA  +L +M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           F    +   P+ VTY  +I G+   G+ ++A  +  E+  +GLIP+  T+
Sbjct: 334 FDNSIQ---PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 238/529 (44%), Gaps = 90/529 (17%)

Query: 77  KKYPKIRSF------LHMFVKN----GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
           K  PK+ SF      L   ++N    G F SV  +   +   +  +   S I+  +  AY
Sbjct: 65  KSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIV--VFRAY 122

Query: 127 VKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKF----EDVEYVYKEMKRRR 181
            K   P    + F R  D +  K SV S N +L  ++ EG +    E  +YV        
Sbjct: 123 GKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I  N  SFN V+  LCK G +++A ++   M      P   TY  L+DG CK+  I +  
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE-- 240

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A  +  +M   G  P+ V +N LIDG CK  ++S   K+ + M   G     VTYN+LI
Sbjct: 241 -AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLI 299

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV---------------- 345
           +GLC+ GKLD+AV+L + M++S   PN VT   LING  K++                  
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYR 359

Query: 346 -------------------EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
                              E+A  L+  ++E+G  P+++ Y+ +ID  C+EG+  +A  +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419

Query: 387 RNSMLDRGVLPDVSTYNCLI-----AGLSRE----------------------------- 412
            N M+  G LP+V TY+ L+      GLS E                             
Sbjct: 420 LNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCG 479

Query: 413 -GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            G V+    + ++++  G++   V Y+ ++  LC  G    A+ L  EM   E+ K  P+
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +VTYN+L+ G C +  +  A  LLN +L++G  P+  T       + EK
Sbjct: 540 VVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEK 588



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 32/308 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L KEGK E+   ++K+M  +    N+  ++ V++GLC+ GK N+A +I+  M S G
Sbjct: 368 LISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG 427

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V TY+ L+ G+ K    G   +A  V+++M E G   NE  ++ LIDG C    + 
Sbjct: 428 CLPNVYTYSSLMKGFFK---TGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS---GLKPNVVTSN 333
            AM V+ +M + GI    V Y+S+I GLC  G +D A+ L  EM+       +P+VVT N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY------CKEGRMEDAFAMR 387
            L++G C +K V +A  L + + ++G  P VIT NT ++        C+EGR        
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGR-------- 596

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
            S L+            L+A L +   V G   I+  ++   +     T+ ++V  +CK 
Sbjct: 597 -SFLEE-----------LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKP 644

Query: 448 GKSKKAVS 455
            K   A++
Sbjct: 645 KKINAAIN 652


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 212/397 (53%), Gaps = 9/397 (2%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
           LGF A       G     ++   +L+ L  + +  D ++ V + M +     N+ S+N +
Sbjct: 109 LGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168

Query: 193 LNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
           L GLC   +  +A ++++ M   G    P VV+Y  +I+G+ K+G + K Y     + +M
Sbjct: 169 LKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY---GTYHEM 225

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
           ++ GILPN VT++++I   CK + +  AM+V   M  +G+     TYNS+++G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            EA+    +M + G++P+VVT N+L++  CK     +AR +FD ++++GL P + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           +  Y  +G + +   + + M+  G+ P+   ++ LI   +++G V+    + +++   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VTY  ++G LCK G+ + A+   ++M     E+  P  + YN LI   C   K + 
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMI---DERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           A  L+ E+L++G+  +   +  + +   ++G + + E
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P + S+   ++ F K G        +H +      +  N +    ++ A  K        
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E        G+  +  + N ++      G+ ++     K+M    +E ++ ++N +++ L
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK G+  +A  + + M   G+ P++ TY  L+ GY  KG + +M+    +   MV NGI 
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIH 371

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           PN   F+ LI  + K   +  AM VF +M   G+    VTY ++I  LC  G++++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            ++M+   L P  +  N+LI+  C     +KA+ L  ++ ++G+    I +N++ID++CK
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EGR+ ++  + + M+  GV PD+ TY+ LI G    G ++    ++  +V+ GM+   VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+   CK  + + A+ L  E   ME     P+I+TYN++++G  Q  +   A  L  
Sbjct: 552 YNTLINGYCKISRMEDALVLFRE---MESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 497 ELLEKGLIPNQTTYQIV 513
            + E G     +TY I+
Sbjct: 609 GITESGTQLELSTYNII 625



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 53/485 (10%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           ++ +L  A+   K    L   VKNG   +  T              NSI+       Y  
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-------------NSIV-----HGYCS 281

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           + +P       K+    G++  V++ N L+  L K G+  +   ++  M +R ++  + +
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +  +L G    G L +   +++ M   G+ P    ++ILI  Y K+G   K+ +A  VF 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG---KVDQAMLVFS 398

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M + G+ P+ VT+ T+I   CK   +  AM+ FE+M    ++ G + YNSLI+ LC+  
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           K D+A  L  EM+  G+  + +  N++I+  CK+  V ++  LFD +   G+ P +ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           TLID YC  G+M++A  +  SM+  G+ PD  TYN LI G  +   +E    +  E+ ++
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAV----------------------------SLLDEM 460
           G+   ++TYNI++  L +  ++  A                             +L DE 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 461 FKMEKEKKWPNIV----TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +M +     ++     T+N++I    + G+ ++A  L   L   GL+P+  TY ++ E 
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 517 MMEKG 521
           ++E+G
Sbjct: 699 LIEQG 703



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 199/377 (52%), Gaps = 6/377 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  K+GK +    V+ +M+++ +  +  ++  V+  LCK+G++  A    E M    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           +SP  + YN LI   C      K  KA  +  +M++ GI  + + FN++ID  CK+  + 
Sbjct: 440 LSPGNIVYNSLIHSLCI---FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            + K+F+ M   G+   ++TY++LI+G C+ GK+DEA  L   M++ G+KP+ VT N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           NG+CK   +E A VLF ++   G+SP +ITYN ++    +  R   A  +   + + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            ++STYN ++ GL +    +    +   L    ++    T+NI++GAL K G++ +A  L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
                 +      P++ TY+++ +   ++G LE+ + L   + E G   N      +  +
Sbjct: 677 FA---ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 517 MMEKGFIPDIEGHMYNI 533
           ++++G I     +++ I
Sbjct: 734 LLQRGDITRAGTYLFMI 750



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 180/351 (51%), Gaps = 11/351 (3%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS--DIMEDMKSLGVSPKVVTYN 225
           ED  +V+ E+ RR    ++   N  L  + +       S  + M    +  V+P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK-VFEE 284
           IL+   C  G +   +   A   ++++ G + + + F  ++ G C D+  S AM  V   
Sbjct: 96  ILMGSCCCAGRLDLGF---AALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNALINGFCKK 342
           M   G    V +YN L+ GLC D +  EA+ L   M   G    P+VV+   +INGF K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
             ++KA   + ++ ++G+ P+V+TY+++I A CK   M+ A  +  SM+  GV+P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           N ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  + D    
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD---S 329

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M K    P I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 13/306 (4%)

Query: 232 CKKGGIGKMYKADAV--FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           C    + +   A AV  +  M   G   + PN  T+  L+   C    +         + 
Sbjct: 59  CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVI 118

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKL 344
             G     + +  ++ GLC D +  +A  + LR  M   G  PNV + N L+ G C    
Sbjct: 119 KKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLR-RMTQLGCIPNVFSYNILLKGLCDDNR 177

Query: 345 VEKARVLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
            ++A  L   + + G    P V++Y T+I+ + KEG ++ A+   + MLDRG+LP+V TY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +IA L +   ++    ++  +V NG+     TYN +V   C  G+ K+A+  L    K
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK---K 294

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           M  +   P++VTYN L+   C+ G+  +A  + + + ++GL P  TTY  + +    KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 523 IPDIEG 528
           + ++ G
Sbjct: 355 LVEMHG 360



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 29/347 (8%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +RYF     E R S   ++   L+HSL +  K+ K +  +   +  G    + TIF   +
Sbjct: 429 MRYFEQMIDE-RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIF--FN 483

Query: 107 TCSDSLCRNSIIID---MLMLAYVKNMKPHL--------GF-------EAFKRAGDY--- 145
           +  DS C+   +I+   +  L     +KP +        G+       EA K        
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K   ++ N L+    K  + ED   +++EM+   +  ++ ++N +L GL +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   +   G   ++ TYNI++ G CK     +  +   +F+++    +     TFN +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR---MFQNLCLTDLQLETRTFNIM 660

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I    K      A  +F  + ++G+   V TY+ +   L   G L+E   L   M  +G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
             N    N+++    ++  + +A      I E+  S    T +  +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 20/136 (14%)

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            E  R++ +EL+  G  A +   N  +  + +   +  AVS  + M +   ++  PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCT 93

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-----------------QIVREEM 517
           Y +L+   C  G+L+     L  +++KG I +   +                  IV   M
Sbjct: 94  YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRM 153

Query: 518 MEKGFIPDIEGHMYNI 533
            + G IP++    YNI
Sbjct: 154 TQLGCIPNV--FSYNI 167


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A  +F+EM   G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++  +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P   TY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKE---MQRDGYKPSVVT 418



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  +++   ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M+ +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G  P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 161/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G L+E   L++ M ASG++P+V T + LING CK+  ++ A VLFD++ ++GL P+ +T
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E++
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++    TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 143/270 (52%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G + + F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANV 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++ G+    VT+  L+   CK+G+   A+ +  +M         P+++TYN LI 
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS---PDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E++ KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKFTY 314



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                     LI     +K    A  +F  I
Sbjct: 15  SYCTMIHFLCTHQMLPEA-------------------KTLIQIVVSRKGKGSASAVFAAI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVR 514
           ++V++N L+ G+ + G L +   L N +   G+ P+  TY                 ++ 
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++KG +P+       I+GH  N
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKN 254


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 223/447 (49%), Gaps = 11/447 (2%)

Query: 74   VVAKKYPKIRSFLHMFVKNGKFT-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
            V+A  Y  + + L  FV++G    ++ T+   +      + R+S+    LM   +K    
Sbjct: 655  VLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSV--HSLMEGILKRDGT 712

Query: 133  HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                E  +     GL    L  + ++R L K  +      + K+ +   + L   S+N +
Sbjct: 713  EKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNAL 772

Query: 193  LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
            + GL     ++ A ++  +MK LG  P   TY++++D   K   I  M K   + ++M  
Sbjct: 773  ICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLK---IQEEMHN 829

Query: 253  NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             G     VT+NT+I G  K + +  A+ ++ ++ S G +    TY  L++GL  DG +++
Sbjct: 830  KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889

Query: 313  AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            A AL DEM+  G +PN    N L+NG+      EK   LF+ + EQG++P + +Y  +ID
Sbjct: 890  AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVID 949

Query: 373  AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              C +GR+ D  +    + D G+ PD+ TYN LI GL + G +E   ++ N++   G+  
Sbjct: 950  TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009

Query: 433  GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDA 491
             L TYN L+  L K GK+ +A  + +E+      K W PN+ TYN LI+G+   G  E+A
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLA----KGWKPNVFTYNALIRGYSVSGSPENA 1065

Query: 492  NGLLNELLEKGLIPNQTTYQIVREEMM 518
                  ++  G  PN +TY  +  +M+
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYMQLPNQML 1092



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 213/451 (47%), Gaps = 16/451 (3%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI---IIDMLMLAYVKNMKPHLGF 136
           P +R++  + +  GK     T+   L        R ++    I + +L     ++    +
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE--AY 261

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
              ++  + G K  V++   L++ L   G+  D + V+ +MK    + +  ++  +L+  
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
             +G     S+I   +K+ G +  VV+Y   +D  C+   +G++ +A  VF +M + GI+
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ---VGRVDEALDVFDEMKQKGII 378

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P + ++N+LI GF K +  + A+++F  M  HG      T+   IN     G+  +A+  
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            + M + G+ P+VV  NA++ G  K   +  A+ +F ++   G+SP  ITY  +I    K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
               ++A  +   M++    PDV   N LI  L + G       I  EL    +     T
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+  L ++GK K+ + LL+    M      PNI+TYN ++   C+ G++  A  +L 
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLE---GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLY 615

Query: 497 ELLEKGLIP-----NQTTYQIVREEMMEKGF 522
            +   G +P     N   Y +V+E+ +++ F
Sbjct: 616 SMTMNGCMPDLSSYNTVMYGLVKEDRLDEAF 646



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 201/413 (48%), Gaps = 8/413 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+   + L+   VK+       + +K     G+  +V + + L+ A  K    E V  + 
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+ R +  N+ S+   +  L +AG+L +A  I+  M+  G  P VVT  +LI   C  
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM-KVFEEMGSHGIAAG 293
              G++  A  VF  M  +   P+ VT+ TL+D  C D   S ++ +++  + + G    
Sbjct: 290 ---GRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSGDSRSVSEIWNALKADGYNDN 345

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VV+Y + ++ LC  G++DEA+ + DEM   G+ P   + N+LI+GF K     +A  LF+
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            ++  G +P+  T+   I+ + K G    A      M  +G++PDV   N ++ GL++ G
Sbjct: 406 HMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +   + + +EL   G+    +TY +++    K   + +A+ +  EM    + +  P+++
Sbjct: 466 RLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI---ENRCAPDVL 522

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
             N LI    + G+  +A  +  EL E  L P   TY  +   +  +G + ++
Sbjct: 523 AMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 40/448 (8%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D L  NS+I DML     K  + +  ++ F    +  L+ +  + N LL  L +EGK ++
Sbjct: 520 DVLAMNSLI-DML----YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  + + M       N+ ++N VL+ LCK G++N A D++  M   G  P + +YN ++ 
Sbjct: 575 VMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMY 634

Query: 230 GYCKKGGIG-------KMYKADA--------VFKDMVENGILPNEV-------------- 260
           G  K+  +        +M K  A        +    V +G++   +              
Sbjct: 635 GLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694

Query: 261 ---TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
              + ++L++G  K +    +++  E + S G+    +  + +I  LC   +   A  L 
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELV 754

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +    G+     + NALI G   + L++ A  LF ++   G  P   TY+ ++DA  K 
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ED   ++  M ++G      TYN +I+GL +   ++   N+  +L++ G      TY
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+  L KDG  + A +L DEM +   E   PN   YN+L+ G+   G  E    L   
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCE---PNCAIYNILLNGYRIAGDTEKVCELFES 931

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++E+G+ P+  +Y +V + +   G + D
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLND 959



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 180/397 (45%), Gaps = 43/397 (10%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN +L  +   G+  DV  V+  M+R+ I+ N+ +F  V   +   G L  A   +  M
Sbjct: 103 SCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM 162

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           K  G+     TYN LI  +  K G  +  +A  V+K M  +G++P   T++ L+  F K 
Sbjct: 163 KEAGIVLNAYTYNGLIY-FLVKSGFDR--EAMDVYKAMAADGVVPTVRTYSVLMLAFGKR 219

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            +    + +  EM + G+   V +Y   I  L   G+L+EA  +  +M   G KP+VVT+
Sbjct: 220 RDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279

Query: 333 NALINGFCKKKLVEKARVLF-----------------------------------DDISE 357
             LI   C    +  A+ +F                                   + +  
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKA 339

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G + +V++Y   +DA C+ GR+++A  + + M  +G++P   +YN LI+G  +      
Sbjct: 340 DGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYN 476
              + N +  +G      T+ + +    K G+S KA+    + +++ K K   P++V  N
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL----KRYELMKSKGIVPDVVAGN 455

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ++ G  + G+L  A  + +EL   G+ P+  TY ++
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 220/488 (45%), Gaps = 18/488 (3%)

Query: 44  VLILRYFCWSTKELRA--SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
           VL + Y   S + L+A   + L+ +  ++  +V         + L+   K G+      +
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN------AVLYGLAKTGRLGMAKRV 473

Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
           FH L     S   ++I   M++    K        + F    +      VL+ N L+  L
Sbjct: 474 FHELKAMGIS--PDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML 531

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K G+  +   ++ E+K   +E    ++N +L GL + GK+ +   ++E M S    P +
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNI 591

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
           +TYN ++D  CK G +   Y  D ++  M  NG +P+  ++NT++ G  K++ +  A  +
Sbjct: 592 ITYNTVLDCLCKNGEVN--YALDMLYS-MTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWM 648

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV-ALRDEMMASGLKPNVVTSNALINGFC 340
           F +M    +A    T  +++      G + EA+  +R+ ++    K +  + ++L+ G  
Sbjct: 649 FCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGIL 707

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+   EK+    ++I+  GL    +  + +I   CK      A  +     + GV     
Sbjct: 708 KRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTG 767

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           +YN LI GL  E  ++    + +E+   G      TY++++ A+   GKS +   +L   
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM---GKSMRIEDMLKIQ 824

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            +M  +      VTYN +I G  +   L++A  L  +L+ +G  P   TY  + + +++ 
Sbjct: 825 EEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884

Query: 521 GFIPDIEG 528
           G I D E 
Sbjct: 885 GNIEDAEA 892



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 183/377 (48%), Gaps = 16/377 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V+S    + AL + G+ ++   V+ EMK++ I     S+N +++G  KA + N+A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            ++   M   G +P   T+ + I+ + K G   +  KA   ++ M   GI+P+ V  N +
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSG---ESLKALKRYELMKSKGIVPDVVAGNAV 457

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           + G  K   +  A +VF E+ + GI+   +TY  +I         DEA+ +  EM+ +  
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V+  N+LI+   K     +A  +F ++ E  L P+  TYNTL+    +EG++++   
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M      P++ TYN ++  L + G V    +++  +  NG    L +YN ++  L 
Sbjct: 578 LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLV 637

Query: 446 KDGKSKKAVSLLDEMFKMEKEKK---WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
           K+ +       LDE F M  + K    P+  T   ++  F + G +++A   L+ + E  
Sbjct: 638 KEDR-------LDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA---LHTVREYI 687

Query: 503 LIPNQTTYQIVREEMME 519
           L P+    +     +ME
Sbjct: 688 LQPDSKVDRSSVHSLME 704



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 199/425 (46%), Gaps = 12/425 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           + GK   V  +   ++  S+S   N I  + ++    KN + +   +        G    
Sbjct: 568 REGKVKEVMQLLEGMN--SNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           + S N ++  LVKE + ++  +++ +MK+  +  +  +   +L    ++G + +A   + 
Sbjct: 626 LSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVR 684

Query: 211 DMKSLGVSPKVVTYNI--LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +   L    KV   ++  L++G  K+ G  K  +     +++  +G+L +++  + +I  
Sbjct: 685 EY-ILQPDSKVDRSSVHSLMEGILKRDGTEKSIE---FAENIASSGLLLDDLFLSPIIRH 740

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK +   AA ++ ++  + G++    +YN+LI GL  +  +D A  L  EM   G  P+
Sbjct: 741 LCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T + +++   K   +E    + +++  +G   + +TYNT+I    K   +++A  +  
Sbjct: 801 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 860

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ++  G  P   TY  L+ GL ++GN+E    + +E++  G       YNIL+      G
Sbjct: 861 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
            ++K   L + M +   +   P+I +Y V+I   C  G+L D      +L + GL P+  
Sbjct: 921 DTEKVCELFESMVE---QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977

Query: 509 TYQIV 513
           TY ++
Sbjct: 978 TYNLL 982


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 48/420 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG----- 200
           G+  +  S N L+R+  +  + +D    ++ MKR+R + +L +F  +++ LCKAG     
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 201 -------------------------------KLNKASDIMEDMKSLGVSPKVVTYNILID 229
                                          ++ +A ++   M+  G  P  + YN +ID
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G  K G   +  K   V  +M+    +P EVT+  L++  CK   +  A ++F  M + G
Sbjct: 269 GLAKAGHAQEALK---VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                V Y SLI+G    G++ EA +L DEM+ +G +P+V+T   +I+G CK    E+A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             F+++   G  P+V+TY T+I    K GR+ +AF +   M+  G  PD  TY CL+ G 
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGF 445

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G ++    +++EL        L  Y+ LV  LC  G  +K +  L E  K   E   
Sbjct: 446 CKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLD 505

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------REEMMEKGF 522
           P +     +I G C+ G+L++A  +   ++ +G  P+ TTY I+       RE  +E+ F
Sbjct: 506 PGLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 189/403 (46%), Gaps = 44/403 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ +L K G  E  E +++ M       N   +  +++G  K+G++ +A  + ++M   G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+T+ ++IDG CK G   +  K+   F++M+  G  PN VT+ T+I G  K   ++
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKS---FEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++ + M +HG     VTY  L++G C  G+LDEA  L DE+      PN+   ++L+
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 337 NGFCKKKLVEK------------------------------------ARVLFDDISEQGL 360
           NG C    VEK                                    A  +F  +  +G 
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 361 SPSVITYNTLIDAYCK--EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            P   TYN LI+  C+  E R+E AFA+ + +   G LPD  TY  L  GL + G V+  
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++ E  + G  A +V Y  L   LC  G+  +AVSL  EM +   +   P+   Y  +
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR---QGGAPDAAAYCCI 654

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I G  +  KLEDA    +E++ KG  P   TY  + + +   G
Sbjct: 655 INGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 189/374 (50%), Gaps = 8/374 (2%)

Query: 139 FKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           F+ AG+  G +  V + N L+  LV E  +     +++EM +  I  N  SFN ++    
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           +  + + A    E MK     P + T+ IL+D  CK G   K ++   VF +M+  G +P
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE---VFHEMMAMGFVP 222

Query: 258 NEVTFNT-LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            +   +T ++    K + +  A +VF +M   G     + YN++I+GL   G   EA+ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D M+A    P  VT   L+N  CK   +E+A  LF  ++  G  P+ + Y +LI  + K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GRM++A ++ + M++ G  PDV T+  +I GL + GN E       E++  G +  +VT
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  ++  L K G+   A  ++  M        +P+ VTY  L+ GFC+ G+L++A  LL+
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIA---HGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 497 ELLEKGLIPNQTTY 510
           EL +    PN   Y
Sbjct: 460 ELDKCSSSPNLQLY 473



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 164/311 (52%), Gaps = 9/311 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++ GLCK G+L++A  I + M S G  P   TYNILI+G C+     ++ +A A+  D+ 
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLE 570

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           + G LP+ VT+  L  G CK   +  A+K+ EE  S G  A VV Y +L  GLC  G++D
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
            AV+L  EM+  G  P+      +ING  K K +E A   FD++  +G  P+V TY  L+
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 372 DAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
            A C  G +++AF    SML RG ++  V  Y+ LI G  +   V+    +  ++++ G 
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
               VT   L   L + GK++KA  LL E   M      P+  T+  ++ G     +  D
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQE---MAAGGSPPHAATFTAILDGL----RKSD 803

Query: 491 ANGLLNELLEK 501
            +G L +L+++
Sbjct: 804 ESGKLLKLVQE 814



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 21/276 (7%)

Query: 278 AMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           A+  F   G   G    V TYN L+N L  +    +  A+ +EM+ +G+ PN  + N LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-V 395
             F + +  + A   F+ +  +   P + T+  L+D  CK G  E AF + + M+  G V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PD + +  ++  L +   V+  R +  ++   G     + YN ++  L K G +++A+ 
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-- 513
           +LD M     +   P  VTY +L+   C+ G LE A  L   +   G  PN   Y  +  
Sbjct: 282 VLDNMLA---KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 514 --------------REEMMEKGFIPDIEGHMYNISG 535
                          +EM+E G+ PD+  H   I G
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 4/213 (1%)

Query: 161 LVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPK 220
           L K G+ +    + +E   R    ++ ++  +  GLC  G++++A  + ++M   G +P 
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 221 VVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMK 280
              Y  +I+G  K   + K+  A   F +M+  G  P   T+  L+   C   N+  A  
Sbjct: 648 AAAYCCIINGLIK---VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704

Query: 281 VFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            FE M + G +   V+ Y++LI+G C   K+D A+ L ++M++ G  P  VTS +L +G 
Sbjct: 705 RFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            +    EKA+ L  +++  G  P   T+  ++D
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 4/204 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            + A   G  + V++   L   L  +G+ +    +++EM R+    +  ++  ++NGL K
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             KL  A    ++M   G  P V TY  L+   C  G + + +     F+ M+  G L  
Sbjct: 661 VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR---FESMLARGELVG 717

Query: 259 EV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
            V  ++ LI GFCK   + AA+K+FE+M S G     VT  SL +GL   GK ++A  L 
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777

Query: 318 DEMMASGLKPNVVTSNALINGFCK 341
            EM A G  P+  T  A+++G  K
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRK 801


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 42/404 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K  V + N ++    K  + E  + V   MKR+    ++ + N ++   C  GK++ A  
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 208 IMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
           + E++ K     P ++TY ILI+ Y  +GGI +  K   +  +M+  G+ P+  T+N + 
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALK---LLDEMLSRGLEPDTFTYNVIT 157

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G CK+  +  A +    + S G    V+TYN L+  L   GK DE      E+ + G +
Sbjct: 158 RGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCE 217

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PNVVT + LI+  C+   +E++  L   + E+GL+P    Y+ LI A+C+EG+++ A   
Sbjct: 218 PNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEF 277

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI------------------------- 421
            + M+  G LPD+  YN ++A L + GN +    I                         
Sbjct: 278 LDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWS 337

Query: 422 ----------MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
                     ++++++ G+   ++TYN L+  LC+DG   +A+ LL +M     +   PN
Sbjct: 338 SGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ---PN 394

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           IV+Y  ++ G C+  +++DA  +L  ++E G  PN+TTY ++ E
Sbjct: 395 IVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 209/393 (53%), Gaps = 10/393 (2%)

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           A DY  +  V+ C +L++        +    V   +++   + ++ ++N V++G CKA +
Sbjct: 3   AKDY--QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEV 260
           +  A  +++ MK  G SP VVT+NI+I  +C KG I    K   VF++++ +N   P  +
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK---VFEELLKDNNCKPTLI 116

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+  LI+ +  +  I  A+K+ +EM S G+     TYN +  GLC +GK+D A      +
Sbjct: 117 TYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL 176

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            + G KP+V+T N L+     +   ++      +I  +G  P+V+TY+ LI + C++G++
Sbjct: 177 NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKI 236

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           E++  +   M ++G+ PD   Y+ LIA   REG ++     ++ ++ +G    +V YN +
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTI 296

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           + ALCK+G    AV +     K+++    PN+ +YN ++      G    A G+++++L 
Sbjct: 297 MAALCKNGNGDHAVEIFG---KLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 501 KGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           KG+ P+  TY  +   +   G + +  G + ++
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 180/355 (50%), Gaps = 6/355 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D   K ++++   L+ A + EG  ++   +  EM  R +E +  ++N +  GLCK GK++
Sbjct: 108 DNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVD 167

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A + +  + S G  P V+TYNIL+     +G   K  + +    ++   G  PN VT++
Sbjct: 168 RAFEFVRTLNSRGCKPDVITYNILLRALLNQG---KWDEGEKWMSEIFSRGCEPNVVTYS 224

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI   C+D  I  ++ + + M   G+      Y+ LI   C +GKLD A+   D M+  
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P++V  N ++   CK    + A  +F  + E G  P+V +YNT++ A    G    A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             M + ML +G+ PDV TYN LI+ L R+G V+    ++ ++++   +  +V+Y  ++  
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           LCK  +   A+ +L  M +   +   PN  TY +LI+G    G    A  L N L
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQ---PNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 152/294 (51%), Gaps = 21/294 (7%)

Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           MV     P+ +    LI GF    NI  A +V   +  HG    V  YN++I+G C   +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYN 368
           ++ A  + D M   G  P+VVT N +I  FC K  ++ A  +F++ + +    P++ITY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI+AY  EG +++A  + + ML RG+ PD  TYN +  GL +EG V+     +  L + 
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G +  ++TYNIL+ AL   GK  +    + E+F    E   PN+VTY++LI   C+ GK+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCE---PNVVTYSILISSLCRDGKI 236

Query: 489 EDANGLLNELLEKGLIPNQTTYQ-----IVREE-----------MMEKGFIPDI 526
           E++  L+  + EKGL P+   Y        RE            M+  GF+PDI
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDI 290



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 181/378 (47%), Gaps = 10/378 (2%)

Query: 89  FVKNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
           F   GK      +F  L   + C  +L   +I+I+  +L    +    L  E   R    
Sbjct: 89  FCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR---- 144

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+    + N + R L KEGK +      + +  R  + ++ ++N +L  L   GK ++ 
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG 204

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
              M ++ S G  P VVTY+ILI   C+ G   K+ ++  + K M E G+ P+   ++ L
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDG---KIEESVNLVKVMKEKGLTPDAYCYDPL 261

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  FC++  +  A++  + M   G    +V YN+++  LC +G  D AV +  ++   G 
Sbjct: 262 IAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGC 321

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PNV + N +++         +A  +   +  +G+ P VITYN+LI   C++G +++A  
Sbjct: 322 PPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIG 381

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   ML     P++ +Y  ++ GL +   ++    ++  ++ NG +    TY +L+  + 
Sbjct: 382 LLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIG 441

Query: 446 KDGKSKKAVSLLDEMFKM 463
             G   +A+ L + ++ M
Sbjct: 442 FSGSRTQAMELANSLYIM 459


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 6/401 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+   D ++ +     K     +   R         V++C  L+ A  KE        ++
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 239

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+ +  + ++ ++N ++ G CK G+L++A   ++ + S G  P V+++N+++   C  
Sbjct: 240 NEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSG 299

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   +   A  +   M+  G LP+ VTFN LI+  C+   +  A+ V E M  HG     
Sbjct: 300 G---RWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            ++N LI G C    +D A+   + M++ G  P++VT N L+   CK   V+ A V+   
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +S +G SPS+I+YNT+ID   K G+ E A  +   M  +G+ PD+ T   ++ GLSREG 
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V       + L    +R     YN ++  LCK  ++  A+  L +M  + K  K P   T
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM--VAKGCK-PTEAT 533

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           Y  LIKG   +G  EDA+ L NEL  +GL+      ++  E
Sbjct: 534 YTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLE 574



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 223/475 (46%), Gaps = 46/475 (9%)

Query: 86  LHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA 142
           L   ++NG+    S     ++      D +   ++I +   +   KN    +G       
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILE---- 141

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
            + G    V S N L+    K G+ E+   V   + R  +  N  +++ VL  LC  GKL
Sbjct: 142 -ESGAVIDVTSYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKL 197

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  ++         P VVT  +LID  CK+ G+G+  K   +F +M   G  P+ VT+
Sbjct: 198 KQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK---LFNEMRNKGCKPDVVTY 254

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N LI GFCK   +  A++  +++ S+G    V+++N ++  LC  G+  +A+ L   M+ 
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G  P+VVT N LIN  C+K L+ KA  + + + + G +P+  ++N LI  +C    ++ 
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      M+ RG  PD+ TYN L+  L ++G V+    I+++L + G    L++YN ++ 
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434

Query: 443 ALCKDGKSKKAVSLLDEMF----------------------KMEKEKKW----------P 470
            L K GK++ AV LL+EM                       K+ +  K+          P
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           N   YN +I G C+  +   A   L +++ KG  P + TY  + + +  +G   D
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAED 549



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 79  YPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPH 133
           YP I ++   L    K+GK      I   LS+  CS SL   + +ID L+    K  K  
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL----KVGKAE 443

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           L  E  +     GLK  +++C  ++  L +EGK  +    +  +KR  I  N   +N ++
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSII 503

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            GLCK+ + + A D + DM + G  P   TY  LI G   +G
Sbjct: 504 TGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEG 545


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 41/410 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V + N L+    K  + +D   V   M+ +    +  ++N ++  LC  GKL+ A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++  + S    P V+TY ILI+    +GG+ +  K   +  +M+  G+ P+  T+NT+I 
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK---LMDEMLSRGLKPDMFTYNTIIR 271

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A ++   +   G    V++YN L+  L   GK +E   L  +M +    P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT + LI   C+   +E+A  L   + E+GL+P   +Y+ LI A+C+EGR++ A    
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN------------------------ 423
            +M+  G LPD+  YN ++A L + G  +    I                          
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 424 -----------ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                      E+++NG+    +TYN ++  LC++G   +A  LL +M   E     P++
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH---PSV 508

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           VTYN+++ GFC+  ++EDA  +L  ++  G  PN+TTY ++ E +   G+
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 175/326 (53%), Gaps = 9/326 (2%)

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C++G   ++  ++E M   G +P V+    LI G+     I K  +   + +   +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+   +N LI+GFCK   I  A +V + M S   +   VTYN +I  LC  GKLD A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +++++   +P V+T   LI     +  V++A  L D++  +GL P + TYNT+I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG ++ AF M  ++  +G  PDV +YN L+  L  +G  E    +M ++ +      +VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y+IL+  LC+DGK ++A++LL    K+ KEK   P+  +Y+ LI  FC++G+L+ A   L
Sbjct: 336 YSILITTLCRDGKIEEAMNLL----KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKG 521
             ++  G +P+   Y  V   + + G
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNG 417



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 183/352 (51%), Gaps = 6/352 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++   L+ A + EG  ++   +  EM  R ++ ++ ++N ++ G+CK G +++A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +++  G  P V++YNIL+     +G   K  + + +   M      PN VT++ LI 
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQG---KWEEGEKLMTKMFSEKCDPNVVTYSILIT 341

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C+D  I  AM + + M   G+     +Y+ LI   C +G+LD A+   + M++ G  P
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++V  N ++   CK    ++A  +F  + E G SP+  +YNT+  A    G    A  M 
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G+ PD  TYN +I+ L REG V+    ++ ++ +      +VTYNI++   CK 
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            + + A+++L+ M         PN  TY VLI+G    G   +A  L N+L+
Sbjct: 522 HRIEDAINVLESMV---GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 180/362 (49%), Gaps = 7/362 (1%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  ++   +I+I+  ML    +    L  E   R    GLK  + + N ++R + KEG  
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSR----GLKPDMFTYNTIIRGMCKEGMV 279

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    + + ++ +  E ++ S+N +L  L   GK  +   +M  M S    P VVTY+IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I   C+ G   K+ +A  + K M E G+ P+  +++ LI  FC++  +  A++  E M S
Sbjct: 340 ITTLCRDG---KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    +V YN+++  LC +GK D+A+ +  ++   G  PN  + N + +         +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +  ++   G+ P  ITYN++I   C+EG +++AF +   M      P V TYN ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  +   +E   N++  +V NG R    TY +L+  +   G   +A+ L +++ +++   
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576

Query: 468 KW 469
           ++
Sbjct: 577 EY 578



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 20/272 (7%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  N   ++ + E M   G    V+    LI G      + +AV + + +   G +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              NALINGFCK   ++ A  + D +  +  SP  +TYN +I + C  G+++ A  + N 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +L     P V TY  LI     EG V+    +M+E+++ G++  + TYN ++  +CK+G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  ++     +E +   P++++YN+L++    +GK E+   L+ ++  +   PN  T
Sbjct: 279 VDRAFEMVR---NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 510 YQIV---------REEMM-------EKGFIPD 525
           Y I+          EE M       EKG  PD
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 205/433 (47%), Gaps = 40/433 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-V 173
           +S    +L+ AY K        E+F R  ++  +  V + N +LR +++E  F  + + V
Sbjct: 126 DSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAV 185

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y EM +     NL +F  +++GL K G+ + A  + +DM   G+SP  VTY ILI G C+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           +G       A  +F +M  +G  P+ V  N L+DGFCK   +  A ++       G   G
Sbjct: 246 RGSPED---ARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           +  Y+SLI+GL    +  +A  L   M+   +KP+++    LI G  K   +E A  L  
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLR 362

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            +  +G++P    YN +I A C  G +E+  +++  M +    PD  T+  LI  + R G
Sbjct: 363 SMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------- 460
            V     I  E+  +G    + T+N L+  LCK G+ K+A  LL +M             
Sbjct: 423 LVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLA 482

Query: 461 ----------------FKMEKE-------KKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
                            K  K           P+IV+YNVLI GFC++G ++ A  LLN 
Sbjct: 483 HSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNV 542

Query: 498 LLEKGLIPNQTTY 510
           L  KGL P+  TY
Sbjct: 543 LQLKGLSPDSVTY 555



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 7/340 (2%)

Query: 184 LNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +++DS+ F  +++   K G   KA +    MK     P V TYN+++    ++     + 
Sbjct: 123 VSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFML- 181

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
            A AV+ +M++    PN  TF  L+DG  K    S A K+F++M   GI+   VTY  LI
Sbjct: 182 -AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC  G  ++A  L  EM ASG  P+ V  NAL++GFCK   + +A  L     + G  
Sbjct: 241 SGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
             +  Y++LID   +  R   AF +  +ML R + PD+  Y  LI GLS+ G +E    +
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKL 360

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           +  + + G+      YN ++ ALC  G  ++  SL  EM + E    +P+  T+ +LI  
Sbjct: 361 LRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE---SFPDACTHTILICS 417

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+ G +  A  +  E+ + G  P+  T+  + + + + G
Sbjct: 418 MCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSG 457



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 46/388 (11%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+  L +  ++     +Y  M +R I+ ++  +  ++ GL KAGK+  A  ++  M S
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPS 366

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P    YN +I   C   G G + +  ++  +M E    P+  T   LI   C++  
Sbjct: 367 KGITPDTYCYNAVIKALC---GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM----MASGLKPNVV 330
           +  A ++F E+   G +  V T+N+LI+GLC  G+L EA  L  +M     AS       
Sbjct: 424 VRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAH 483

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           + N   +   +   + KA       ++ G SP +++YN LI+ +C+EG ++ A  + N +
Sbjct: 484 SGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVL 543

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGV-----------------RNIMNELVNNGMRAG 433
             +G+ PD  TYN LI GL R G  E                   R++M        R  
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRR--RKL 601

Query: 434 LVTYNILVGAL----C-------------KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
           LV +N+ +  L    C             K+G++++A   L  + +++  K    +  Y 
Sbjct: 602 LVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERA---LRRLIELDTRKDELTLGPYT 658

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLI 504
           + + G CQ G+  +A  + + L EK ++
Sbjct: 659 IWLIGLCQSGRFHEALMVFSVLREKKIL 686



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 33/298 (11%)

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           +F  +ID   +D       +  EE+ S G++     +  LI+     G  ++AV     M
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEK-ARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                +P+V T N ++    ++ +    A  +++++ +   SP++ T+  L+D   K+GR
Sbjct: 154 KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
             DA  M + M  RG+ P+  TY  LI+GL + G+ E  R +  E+  +G     V +N 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNA 273

Query: 440 LVGALCKDGKSKKAV-------------------SLLDEMFK-------------MEKEK 467
           L+   CK G+  +A                    SL+D +F+             M K  
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN 333

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
             P+I+ Y +LI+G  + GK+EDA  LL  +  KG+ P+   Y  V + +  +G + +
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEE 391



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 37/185 (20%)

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
            +++   G+S     +  LI AY K G  E A      M +    PDV TYN ++  + R
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMR 174

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
           E              +         YN ++   C                        PN
Sbjct: 175 E--------------DVFFMLAFAVYNEMLKCNCS-----------------------PN 197

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
           + T+ +L+ G  +KG+  DA  + +++  +G+ PN+ TY I+   + ++G   D     Y
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFY 257

Query: 532 NISGT 536
            +  +
Sbjct: 258 EMKAS 262


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 222/457 (48%), Gaps = 44/457 (9%)

Query: 76  AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHL 134
           +  Y    S +    +   F  V ++   LS  S  + C + + I ++   Y    +P L
Sbjct: 46  SHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIR-NYGLAGRPRL 104

Query: 135 GFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
             + F R  + + ++ SV   N LL   V+  ++  V    K  K +             
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDK------------- 151

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
                                 GV P V ++NILI   CKK  +    K   VF +M   
Sbjct: 152 ---------------------YGVLPNVFSFNILIKALCKKNDVENALK---VFDEMPTM 187

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G++PN VT+ T++ GF    ++  A KVF E+   G      TY  L+ G C  G+L +A
Sbjct: 188 GMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDA 247

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + + D M  +G++PN VT   +I+ +CK+K   +AR L DD+ ++   PS      +ID 
Sbjct: 248 IKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDV 307

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C++G++E+A  +   ML++  LPD +  + LI  L +EG V   R + +E    G    
Sbjct: 308 LCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPS 366

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           L+TYN L+  +C+ G+  +A  L D+M  +EK  + PN  TYN+LIKGF + G +++   
Sbjct: 367 LMTYNTLIAGMCERGELNEAGRLWDDM--VEKRCR-PNAFTYNMLIKGFMKAGVVKEGVR 423

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
           +L E+L+ G +PN++TY ++ E + E G   D++  M
Sbjct: 424 ILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVM 460



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 196/384 (51%), Gaps = 13/384 (3%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           +++ L+  +V+N + HL     K   D YG+  +V S N L++AL K+   E+   V+ E
Sbjct: 124 LLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDE 183

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           M    +  NL ++  +L G    G L  A  +  ++   G  P   TY +L+ GYCK+G 
Sbjct: 184 MPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQG- 242

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             ++  A  V  +M  NG+ PNEVT+  +ID +CK++    A  + ++M           
Sbjct: 243 --RLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTL 300

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
              +I+ LC DGK++ A  L   M+     P+    + LI+  CK+  V +AR LFD+  
Sbjct: 301 CCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF- 359

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV- 415
           EQG  PS++TYNTLI   C+ G + +A  + + M+++   P+  TYN LI G  + G V 
Sbjct: 360 EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVK 419

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           EGVR I+ E+++NG      TY +L+  L + G        +D++  M    +  +  ++
Sbjct: 420 EGVR-ILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD----VDKVMSMAMASREVDADSW 474

Query: 476 NVLIKGFCQKGKLEDANGLLNELL 499
           ++ +      G L+   G L+ LL
Sbjct: 475 DLFLHKIV--GNLDCGTGALDRLL 496



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 9/344 (2%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSD--SLCRNSIIIDMLMLAYVKNMKPHLGFEAF 139
           + + L++FV+N ++  V +    L  C D   +  N    ++L+ A  K        + F
Sbjct: 125 LNTLLNVFVQNKRYHLVGS---TLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVF 181

Query: 140 KRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
                 G+  ++++   +L   V  G   + E V+ E+  +    +  ++  ++ G CK 
Sbjct: 182 DEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQ 241

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNE 259
           G+L+ A  +M++M+  GV P  VTY ++ID YCK+   G+   A  +  DM++   LP+ 
Sbjct: 242 GRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGE---ARNLIDDMLDKKFLPSS 298

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
                +ID  C+D  +  A  +++ M            ++LI+ LC +GK+ EA  L DE
Sbjct: 299 TLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE 358

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
               G  P+++T N LI G C++  + +A  L+DD+ E+   P+  TYN LI  + K G 
Sbjct: 359 F-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGV 417

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           +++   +   MLD G LP+ STY  LI GL   G    V  +M+
Sbjct: 418 VKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMS 461


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + ++ + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +  +++  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEY 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM ++G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYVPSVVT 418



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 187/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   V+  L K          
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  ++    ++   M + G+   V TY+ LINGLC + K+++A  L DEM+ +GL PN
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTD 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 157/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  +E A  LFD++   GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++ +E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  +E    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E++NNG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L +E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITY 314



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 34/232 (14%)

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAM 386
           +  +  LI     +K    A  +F  I E +G   S +  ++ LI AY + G + DA   
Sbjct: 29  IAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIEC 88

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
                +        T   +I  L +    + V     E +  G  A L  +NIL+ +  K
Sbjct: 89  YRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVK 148

Query: 447 DGKSKKAVSLLDEMFKMEKEKKW---PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +G+ + A S+ D +       KW   P++V++N L+ G+ + G L++   L N +   G+
Sbjct: 149 EGEIRLAQSVFDAI------TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 504 IPNQTTYQI----------------VREEMMEKGFIPD-------IEGHMYN 532
            P+  TY +                + +EM+  G +P+       I+GH  N
Sbjct: 203 QPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKN 254


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 174/328 (53%), Gaps = 8/328 (2%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S++  +NGLCK G++ +A +I  +M+  G +P   TYNILI+G CK     ++    ++ 
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKD---AQLEMGVSLM 149

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M   G  P  VT+ TLI GFC    + AAM + +EM   GI    VTY +LI GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 308 GKLDEAVALRDEMMASGLK--PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
           G+++ A+ +  EM   G +  PNVVT   LI+G C+K L E      D++   G  P+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY  LI   C++G   +A  + N M+  G   DV  YN LI GL + G ++  R +   +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V  G+   + TY  L+  LC  G   +A+ L+ E   M  +   PN VTY  LI GF Q 
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE---MRAKGIVPNSVTYTTLINGFTQA 386

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + + A  L+NE+   GL+P    Y+I+
Sbjct: 387 DRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 171/314 (54%), Gaps = 5/314 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           + V+S ++ +  L K+G+  +   +++EM+ +    +  ++N ++NGLCK  +L     +
Sbjct: 89  TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           M++M++ G SP VVTY  LI G+C  G   ++  A  +  +M   GI PN VT+  LI G
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAG---RVDAAMDILDEMEHRGITPNTVTYTALIQG 205

Query: 269 FCKDENISAAMKVFEEMGSHG--IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            C    +  A+ V +EM   G      VVTY  LI+GLC  G  +  +   DEM+ SG  
Sbjct: 206 LCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCF 265

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           PN  T  ALI+G C+K    +A VL +++   G    V+ YN+LID  CK G ++ A  M
Sbjct: 266 PNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREM 325

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
           +  M+++GV PDV TY  LI GL   G ++    +M E+   G+    VTY  L+    +
Sbjct: 326 QILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQ 385

Query: 447 DGKSKKAVSLLDEM 460
             ++  A+ L++EM
Sbjct: 386 ADRTDHALQLVNEM 399



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 144/285 (50%), Gaps = 34/285 (11%)

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           ++++  I+G CK   I+ AM++F EM   G A    TYN LINGLC D +L+  V+L DE
Sbjct: 92  ISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M A G  P VVT   LI+GFC    V+ A  + D++  +G++P+ +TY  LI   C  G 
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211

Query: 380 MEDAFAMRNSMLDRG--VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           +E A  +   M  RG    P+V TY  LI GL ++G  E     ++E++ +G      TY
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271

Query: 438 NILVGALCKDGKSKKAVSLLDEMFK--------------------------------MEK 465
             L+  LC+ G   +A  LL+EM                                  M +
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +   P++ TY  LI+G C  G L++A GL+ E+  KG++PN  TY
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTY 376



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 162/312 (51%), Gaps = 5/312 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             E F+   + G      + N L+  L K+ + E    +  EM+ R     + ++  +++
Sbjct: 110 AMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIH 169

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           G C AG+++ A DI+++M+  G++P  VTY  LI G C     G++ +A  V K+M   G
Sbjct: 170 GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD---CGEVERAILVLKEMKLRG 226

Query: 255 --ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
               PN VT+  LI G C+       M+  +EM   G      TY +LI+GLC  G   E
Sbjct: 227 NECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLE 286

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L +EM+A G + +VV  N+LI+G CK   ++ AR +   + E+G++P V TY +LI 
Sbjct: 287 AAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQ 346

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  G +++A  +   M  +G++P+  TY  LI G ++    +    ++NE+ +NG+  
Sbjct: 347 GLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406

Query: 433 GLVTYNILVGAL 444
               Y IL  +L
Sbjct: 407 AGDIYKILFKSL 418



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 9/324 (2%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
             K G+      IF  +     +   +S   ++L+    K+ +  +G          G  
Sbjct: 101 LCKKGQIAEAMEIFREMEEKGSA--PDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFS 158

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +V++   L+      G+ +    +  EM+ R I  N  ++  ++ GLC  G++ +A  +
Sbjct: 159 PTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILV 218

Query: 209 MEDMKSLG--VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTL 265
           +++MK  G    P VVTY  LI G C+KG    +++    F D M+ +G  PN  T+  L
Sbjct: 219 LKEMKLRGNECCPNVVTYTQLIHGLCQKG----LFEMGMEFLDEMIISGCFPNNATYTAL 274

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G C+  +   A  +  EM + G    VV YNSLI+GLC  G+LD A  ++  M+  G+
Sbjct: 275 IHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGV 334

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V T  +LI G C   L+++A  L  ++  +G+ P+ +TY TLI+ + +  R + A  
Sbjct: 335 APDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQ 394

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGL 409
           + N M   G++P    Y  L   L
Sbjct: 395 LVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 138/283 (48%), Gaps = 21/283 (7%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +   I ++++++     +     V++Y+  INGLC  G++ EA+ +  EM   G  P+  
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N LING CK   +E    L D++  +G SP+V+TY TLI  +C  GR++ A  + + M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE--LVNNGMRAGLVTYNILVGALCKDG 448
             RG+ P+  TY  LI GL   G VE    ++ E  L  N     +VTY  L+  LC+ G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
             +  +  LDEM        +PN  TY  LI G CQKG   +A  LLNE++  G   +  
Sbjct: 248 LFEMGMEFLDEMI---ISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304

Query: 509 TY-------------QIVREE---MMEKGFIPDIEGHMYNISG 535
            Y                RE    M+EKG  PD+  +   I G
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQG 347


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F  +     +   +  +  
Sbjct: 11  HNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +    + P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++D A+ +   M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E AF  R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYMPSVVT 418



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K         
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E+    G    +  +NIL+  + K+G I     A +VF  + +  + P+ V+FNTL++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
           G+S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+ 
Sbjct: 360 GRSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416

Query: 508 TT 509
            T
Sbjct: 417 VT 418



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 158/275 (57%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +    +   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A      M K   E    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK---ENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 146/271 (53%), Gaps = 7/271 (2%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF  ++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAXILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++  L
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLI 479
           + +E+++NG+    VT+  L+   CK+G+    V L  E++K M  +   P+++TYN LI
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGR----VDLAMEIYKLMLSQSLSPDLITYNTLI 283

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 29/237 (12%)

Query: 296 TYNSLINGLCVDGKLDEA-------VALRDEMMASGL-----------KPNVVTSNALIN 337
           +Y ++I+ LC    L EA       V+ + +  AS +           + ++   + LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGLIT 74

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + +   +  A   +    E        T   +++   K    +  +      L+ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
            +  +N L+    +EG +   +++ + +    +R  +V++N L+    K G        L
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-------L 187

Query: 458 DEMFK----MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           DE F+    M+     P++ TY+VLI G C++ K++DAN L +E+L+ GL+PN  T+
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 258/523 (49%), Gaps = 60/523 (11%)

Query: 60  SHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTS--VSTIFHAL-STCSDSLCRNS 116
           SHS+     ++H L  A    +++ FL   +   K  +  VS +F  L  +  D+    S
Sbjct: 118 SHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHMGGS 177

Query: 117 III-DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           II+ ++L+  + +N       + F +A  +GL+ ++LSCN LL    +  + E +  +++
Sbjct: 178 IIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFE 237

Query: 176 EMKRRRIELNLDSFNFVLNGLCKA--GK---LNKASDIMEDMKSLGVSPKVVTYNILIDG 230
           E+K      N+ ++  ++N  CK   GK   + KA++++E+M+  G SP VVTY   I G
Sbjct: 238 ELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 231 YCKKGGI--------------------------------GKMYKADAVFKDMVENGILPN 258
            C+ G +                                G++++A  + +DM  +GI P 
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
             +++ LIDG CK   +  A+ + EEM    +   +VTY+SL +GLC  G  + ++++  
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
            + A G K +V++ N LINGF  ++ +  A  L  ++   G  P+  T+N LI  +CK  
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R++ A  +   ML  GV  ++ T N +    +REG+      ++NE+ + G+     TYN
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           I++  LCK+ K++KA  +L  M    K   +P  + YN LI G+ ++     A  L  ++
Sbjct: 538 IVIKWLCKEQKTEKAWEVLPVML---KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 499 LEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
           L+ G+ P+  TY +                + +EM++KG +PD
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPD 637



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 213/436 (48%), Gaps = 27/436 (6%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           +S C N++I +     + +N + H  FE  +    +G+  +  S + L+  L K+G+ E 
Sbjct: 322 NSYCYNAVIHE-----FCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEK 376

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              + +EM +  ++ +L +++ + +GLCK+G    +  +  ++ + G    V++YN LI+
Sbjct: 377 ALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLIN 436

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+  +  +G    A  +  +M  NG +PN  TFN LI GFCK + +  A++VF  M   G
Sbjct: 437 GFVLQRDMGS---ACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVG 493

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +   + T N + +    +G   EA+ L +E+   G+ PN  T N +I   CK++  EKA 
Sbjct: 494 VQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   + +  + P  I YNTLID Y K+     A  +   ML  G+ P + TY  LI   
Sbjct: 554 EVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMF 613

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
           S    ++    +  E++  G+    + +  ++   CK G  K A +L +EM +  K    
Sbjct: 614 SNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKS--- 670

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-------------VRE- 515
           PN+VTY  LI G+ +  +++ A+ L N++    + P+  TY               VRE 
Sbjct: 671 PNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREM 730

Query: 516 --EMMEKGFIPDIEGH 529
             EM E G  P+   +
Sbjct: 731 FNEMKENGVFPNYTAY 746



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 3/289 (1%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
            + N+L+    K  + +    V+  M +  ++LN+ + N + +   + G   +A  ++ +
Sbjct: 464 FTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINE 523

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           ++ LG+ P   TYNI+I   CK+    K  KA  V   M++N + P  + +NTLIDG+ K
Sbjct: 524 VQDLGIVPNSYTYNIVIKWLCKEQ---KTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAK 580

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N + A+ ++ +M   GI   +VTY  LIN      K+ EA  L  EM+  GL P+ + 
Sbjct: 581 QSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEII 640

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              +I GFCK   ++ A  L++++S+ G SP+V+TY  LID Y K  RM+ A  + N M 
Sbjct: 641 FTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMK 700

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
              V PD  TY  LI G    G  + VR + NE+  NG+      Y  L
Sbjct: 701 RDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++   L+  L K+G  E +  ++ EM++R +  N+  +N V++ LCK     +A
Sbjct: 269 GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQA 328

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I++ M + G  P ++T+N LI G C +G +    KA+   ++ +   + PN++++  L
Sbjct: 329 MVILKQMFASGCDPDIITFNTLITGLCHEGHV---RKAEHFLREAIRRELNPNQLSYTPL 385

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFC    + AA  +  EM   G    VVT+ +LI+GL V GK+ EA+ +R++M    +
Sbjct: 386 IHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 445

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+V   N LI+G CKK ++  A+ + +++ E+ + P    Y TLID + +   + DA  
Sbjct: 446 FPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 505

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M  +GV PD+ + N +I G  + G +      M+ +   G      TY  ++    
Sbjct: 506 IFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 565

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K G    A+  L +M    K K  PN+VTY+ LI G+C+ G  + A GL   +  + L P
Sbjct: 566 KQGNLNGALRWLCDMI---KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP 622

Query: 506 NQTTYQIVREEMMEK 520
           N  TY I+   + +K
Sbjct: 623 NVVTYTILIGSLFKK 637



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 41/413 (9%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
            YG    V  CN+LL+ LV++ +++D   +Y EM       +  S   ++ GLC  G++ 
Sbjct: 162 QYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVE 221

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK------------------------ 239
           +   ++E     G  P VV YN+LIDGYC++G +G+                        
Sbjct: 222 EGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLI 281

Query: 240 --------MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                   + K  ++F +M + G+ PN   +N++ID  CK  + + AM + ++M + G  
Sbjct: 282 NCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD 341

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             ++T+N+LI GLC +G + +A     E +   L PN ++   LI+GFC +  +  A  L
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
             ++  +G +P V+T+  LI      G++ +A  +R  M +R V PDV+ YN LI+GL +
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD---GKSKKAVSLLDEMFKMEKEKK 468
           +  +   +NI+ E++   ++     Y  L+    +    G ++K          ME +  
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF------MEHKGV 515

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P+IV+ N +IKG+CQ G + +A   ++ + + G IP++ TY  V     ++G
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 202/474 (42%), Gaps = 52/474 (10%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S ++   K G    + ++F  L      L  N  I + ++ A  K           K+  
Sbjct: 279 SLINCLGKKGDLEKIGSLF--LEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMF 336

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G    +++ N L+  L  EG     E+  +E  RR +  N  S+  +++G C  G+L 
Sbjct: 337 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 396

Query: 204 KASDIMEDMKSLGVSPKVVT-----------------------------------YNILI 228
            ASD++ +M   G +P VVT                                   YN+LI
Sbjct: 397 AASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 456

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G CKK     +  A  + ++M+E  + P+E  + TLIDGF + EN+  A K+FE M   
Sbjct: 457 SGLCKKH---MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 513

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G+   +V+ N++I G C  G + EA+     M   G  P+  T   +I+G+ K+  +  A
Sbjct: 514 GVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGA 573

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
                D+ ++   P+V+TY++LI+ YCK G  + A  +  +M    + P+V TY  LI  
Sbjct: 574 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 633

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL------------CKDGKSKKAVSL 456
           L ++  V         ++ N      VT + LV  L            C   +     +L
Sbjct: 634 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 693

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           L    K+  +   P    YN +I   C+   L +A    N + +KG +PN  T+
Sbjct: 694 LVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 747



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 21/350 (6%)

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
            +   D ++ M   G +P       L+  Y   G +GK    D   +   + G LP    
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGK--ATDMCERLREQYGSLPEVTH 171

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
            N L+    +      A K+++EM      A   +   L+ GLC++G+++E + L +   
Sbjct: 172 CNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARW 231

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
            +G  P+VV  N LI+G+C++  + +  +L  ++  +G  P+++TY +LI+   K+G +E
Sbjct: 232 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 291

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
              ++   M  RG+ P+V  YN +I  L +  +      I+ ++  +G    ++T+N L+
Sbjct: 292 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLI 351

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LC +G  +KA   L E  + E     PN ++Y  LI GFC +G+L  A+ LL E++ +
Sbjct: 352 TGLCHEGHVRKAEHFLREAIRRELN---PNQLSYTPLIHGFCMRGELMAASDLLMEMMGR 408

Query: 502 GLIPNQTTYQ----------------IVREEMMEKGFIPDIEGHMYNISG 535
           G  P+  T+                 IVRE+M E+   PD+  +   ISG
Sbjct: 409 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 458



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 162/371 (43%), Gaps = 55/371 (14%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++   L+  LV  GK  +   V ++M  R++  +++ +N +++GLCK   L  A
Sbjct: 409 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAA 468

Query: 206 SDIMEDM-----------------------------------KSLGVSPKVVTYNILIDG 230
            +I+E+M                                   +  GV P +V+ N +I G
Sbjct: 469 KNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKG 528

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
           YC+    G M +A     +M + G +P+E T+ T+I G+ K  N++ A++   +M     
Sbjct: 529 YCQ---FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 585

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
              VVTY+SLING C  G  D A  L   M A  L PNVVT   LI    KK  V +A +
Sbjct: 586 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 645

Query: 351 LFDDISEQGLSPSVITYNTL-----------IDAYC---KEGRMEDAF--AMRNSMLDRG 394
            F+ +     SP+ +T + L           I++ C    E   +DA     +  + D G
Sbjct: 646 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 705

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             P  S YN +I  L R   +    +  N +   G     +T+  L+   C  GKS    
Sbjct: 706 D-PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWR 764

Query: 455 SLLDEMFKMEK 465
           ++L   F+ E+
Sbjct: 765 TILPNEFQQEE 775



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 22/238 (9%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           ++    K+G          +M +R+ + N+ +++ ++NG CK G  + A  +  +M++  
Sbjct: 560 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF--CKDEN 274
           +SP VVTY ILI    KK    K+ +A   F+ M+ N   PN+VT + L++G   C    
Sbjct: 620 LSPNVVTYTILIGSLFKKD---KVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCV 676

Query: 275 ISAAMKVFEEMGSHGIAAGVV---------------TYNSLINGLCVDGKLDEAVALRDE 319
           I++      E+  HG  A +V                YN++I  LC    L EA+  ++ 
Sbjct: 677 INSICCNTSEV--HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 734

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           M   G  PN +T  +L+ GFC        R +  +  +Q     +  Y  L D Y  E
Sbjct: 735 MAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIFRYKFLFDQYATE 792


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +  P+ ++ + + V      S S +F  +     +   +  +  
Sbjct: 11  HTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            L+ AY+++       E ++   ++  +    +C ++L  L+K   F+ V   Y+E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
               +L  FN +++   K G++  A  + + +   G+ P VV++N L++GY K G + + 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           ++       M  +G+ P+  T++ LI+G CK+  +  A ++F+EM  +G+    VT+ +L
Sbjct: 191 FRLKNA---MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+G C +G++  A+ +  +M++  L P+++T N LI G CKK  +++A+ L D++S +GL
Sbjct: 248 IDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            P  ITY TLID  CKEG +E A   R  M+   +  D   Y  LI+GL +EG       
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           ++ E+++ G++  + TY +++   CK G       LL E   M+++   P++VT
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE---MQRDGYVPSVVT 418



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 186/361 (51%), Gaps = 6/361 (1%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S +   + L+ A ++ G   D    Y+  K  +  +  D+   VL  L K          
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
            E+    G    +  +NIL+  + K+G I     A +VF  + + G+ P+ V+FNTL++G
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEI---RLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           + K  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+ +GL PN
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN 240

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VT   LI+G CK   V  A  ++  +  Q LSP +ITYNTLI   CK+G ++ A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 300

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M  +G+ PD  TY  LI G  +EG++E        ++   +R   V Y  L+  LC++G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           +S  A  +L EM  +  +   P I TY ++I  FC+KG +   + LL E+   G +P+  
Sbjct: 361 RSVDAEKMLREMLSVGLK---PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417

Query: 509 T 509
           T
Sbjct: 418 T 418



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 161/275 (58%), Gaps = 3/275 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +++ +E G   +   FN L+  F K+  I  A  VF+ +   G+   VV++N+L+NG   
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L++ M ASG++P+V T + LING CK+  ++ A  LFD++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR+  A  +   ML + + PD+ TYN LI GL ++G+++  +++++E+ 
Sbjct: 244 FTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
             G++   +TY  L+   CK+G  + A   L+   +M KE    + V Y  LI G CQ+G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETA---LEYRKRMIKENIRLDDVAYTALISGLCQEG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           +  DA  +L E+L  GL P   TY ++  E  +KG
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 146/270 (54%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN-GILPNEV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A AVF +++E  G   +++  F+ LI  + +   +  A++ +     H       T   +
Sbjct: 48  ASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L             +E +  G   ++   N L++ F K+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTL++ Y K G +++ F ++N+M   GV PDV TY+ LI GL +E  ++    
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + +E+++NG+    VT+  L+   CK+G+   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLS---QSLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG L+ A  L++E+  KGL P++ TY
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 53/265 (20%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y S+I+ LC    + EA                     LI     +K    A  +F +I
Sbjct: 15  SYCSMIHFLCTHQMIPEA-------------------KTLIQIVVSRKGKGSASAVFAEI 55

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 56  LETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E +  G  A L  +NIL+ +  K+G+ + A S+ D +       KW   P
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAI------TKWGLRP 169

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           ++V++N L+ G+ + G L++   L N +   G+ P+  TY +                + 
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 515 EEMMEKGFIPD-------IEGHMYN 532
           +EM++ G +P+       I+GH  N
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKN 254


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 7/384 (1%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           GD+    +V+S   ++    KE +      ++ EM  R I  ++ + N +++GLCK   +
Sbjct: 114 GDH-CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAM 172

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
           +KA +++  M    + P   TYN L+ GY   G   ++ +A  + K M  +G  PN VT+
Sbjct: 173 DKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSG---QLKEAVRILKQMSRHGQPPNGVTY 229

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           + LID  CK    + A ++   M        V TY  L++G    G L E   L D M+ 
Sbjct: 230 SMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQ 289

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
           +G++P+    N  I  + K   +++A + F+ + +QGL P +I+Y T+ID  CK GR++ 
Sbjct: 290 NGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDA 349

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A +    M+D G+ PD+  +  LI G S  G  E    +  E+++ G+R  +V +  ++ 
Sbjct: 350 AMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMID 409

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            L K+GK  +A +L D    M      PN+V+YN +I G+   GKL++   LL+++L  G
Sbjct: 410 KLFKEGKVTEAKTLFD---LMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVG 466

Query: 503 LIPNQTTYQIVREEMMEKGFIPDI 526
           L PN  T+  + ++M+  G  PD+
Sbjct: 467 LKPNAVTFNTLLDDMLSMGLKPDV 490



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 227/500 (45%), Gaps = 54/500 (10%)

Query: 46  ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHAL 105
           ILR  C    E R S ++ +  R    L            L       K      + H +
Sbjct: 54  ILRTLC---AEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMM 110

Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
           +   D    N +    ++  + K  +    +  F    D G+   V++CN ++  L K  
Sbjct: 111 AEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQ 170

Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
             +  E V ++M  + I  +  ++N +++G   +G+L +A  I++ M   G  P  VTY+
Sbjct: 171 AMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYS 230

Query: 226 ILIDGYCKKGGI--------------------------------GKMYKADAVFKDMVEN 253
           +LID  CK GG                                 G + + + +   MV+N
Sbjct: 231 MLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQN 290

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G+ P+   FN  I  + K   +  AM  F +M   G+   +++Y ++I+GLC  G+LD A
Sbjct: 291 GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           ++   +M+  GL P++V    LI+GF      EKA  LF ++ ++G+ P+V+ + T+ID 
Sbjct: 351 MSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDK 410

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
             KEG++ +A  + + M    V P+V +YN +I G    G ++ V  +++++++ G++  
Sbjct: 411 LFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPN 470

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            VT+N                +LLD+M  M  +   P++ T N LI   C+ G++ED   
Sbjct: 471 AVTFN----------------TLLDDMLSMGLK---PDVATCNTLIDSCCEDGRIEDVLT 511

Query: 494 LLNELLEKGLIPNQTTYQIV 513
           L  E+L K    +  T  I+
Sbjct: 512 LFREMLSKAAKTDTVTENII 531



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 201/405 (49%), Gaps = 25/405 (6%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           RAG   +  + ++   L+      G          ++ +  +  N  SF  +L  LC   
Sbjct: 3   RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62

Query: 201 KLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG--ILP 257
           + + A +I +     LG +P V +Y +L+ G C +    K  +A  +   M E+G    P
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEK---KCEEAVDLIHMMAEDGDHCPP 119

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N V++ T+I GF K++ +  A  +F EM   GI   VVT NS+I+GLC    +D+A  + 
Sbjct: 120 NVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVL 179

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +M    + P+  T N+L++G+     +++A  +   +S  G  P+ +TY+ LID  CK 
Sbjct: 180 RQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKF 239

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
           G   +A  + NSM+     P+V+TY  L+ G + +G++  + N+++ +V NG+R     +
Sbjct: 240 GGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIF 299

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           NI + A  K G+  +A+   +   KM ++   P+I++Y  +I G C+ G+L+ A     +
Sbjct: 300 NIQIYAYVKCGRLDEAMLTFN---KMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQ 356

Query: 498 LLEKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
           +++ GL P+   +                + +  EMM++G  P +
Sbjct: 357 MIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTV 401



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 25/338 (7%)

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           V+P  VTY ILI   C    +G +  A A    +++ G+  N ++F  ++   C ++  S
Sbjct: 9   VAPTTVTYTILISCCCY---VGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 277 AAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSN 333
            AM  V       G    V +Y  L+ GLC + K +EAV L   M   G    PNVV+  
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +I+GF K+  V KA  LF ++ ++G+ P V+T N++ID  CK   M+ A  +   M D+
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
            ++PD +TYN L+ G    G ++    I+ ++  +G     VTY++L+  LCK G   +A
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI- 512
             +L+ M    + +  PN+ TY  L+ G+  KG L + N L++ +++ G+ P+   + I 
Sbjct: 246 REILNSMI---QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQ 302

Query: 513 ---------------VREEMMEKGFIPDIEGHMYNISG 535
                             +M ++G +PDI  +   I G
Sbjct: 303 IYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDG 340


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 202/376 (53%), Gaps = 13/376 (3%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F R  ++G   SV   N +L  L+ E + + +  VY++MKR   E N+ ++N +L  L
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK  K++ A  ++ +M + G  P  V+Y  +I   C+ G + +  +    F+ +V     
Sbjct: 191 CKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVS---- 246

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
                +N LI+G CK+ +    +++  EM   GI+  V++Y++LIN L   G+++ A +L
Sbjct: 247 ----VYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSL 302

Query: 317 RDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
             +M+  G  PN+ T ++L+ G F +    +   +    I   GL P+V+ YNTL+  +C
Sbjct: 303 LAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFC 362

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
             G ++ A ++   M + G  P++ TY  LI G ++ G++EG   I N+++ +G    +V
Sbjct: 363 SHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVV 422

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
            Y  +V ALC+  K K+A SL++    M KE   P++ T+N  IKG C  G+L+ A  + 
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIE---IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 479

Query: 496 NELLEK-GLIPNQTTY 510
            ++ ++    PN  TY
Sbjct: 480 RQMEQQYRCPPNIVTY 495



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 197/386 (51%), Gaps = 13/386 (3%)

Query: 134 LGFEAFKRAGDYGL-KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           L    FK   +  L K + L+   ++R L  +G+ + V+Y+ ++MK +    + D F  V
Sbjct: 57  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 116

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++   + G   +A ++   +K  G  P V  YN ++D    +  I  +Y    V++DM  
Sbjct: 117 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY---MVYRDMKR 173

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           +G  PN  T+N L+   CK+  +  A K+  EM + G     V+Y ++I+ +C  G + E
Sbjct: 174 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKE 233

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
                   +A   +P V   NALING CK++  +    L  ++ E+G+SP+VI+Y+TLI+
Sbjct: 234 G-----RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLIN 288

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMR 431
                G++E AF++   ML RG  P++ T + L+ G    G      ++ N+++   G++
Sbjct: 289 ELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQ 348

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +V YN LV   C  G   KAVS+      ME+    PNI TY  LI GF ++G LE A
Sbjct: 349 PNVVAYNTLVQGFCSHGNIDKAVSVF---LHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEM 517
             + N++L  G  PN   Y  + E +
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEAL 431



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 188/373 (50%), Gaps = 6/373 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G E      + G+  +V+S + L+  L   G+ E    +  +M +R    N+ + + ++ 
Sbjct: 264 GVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVK 323

Query: 195 GLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           G    G    A D+   M +  G+ P VV YN L+ G+C  G I K   A +VF  M E 
Sbjct: 324 GCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDK---AVSVFLHMEEI 380

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  PN  T+ +LI+GF K  ++  A+ ++ +M + G    VV Y S++  LC   K  EA
Sbjct: 381 GCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEA 440

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLID 372
            +L + M      P+V T NA I G C    ++ A  +F  + +Q    P+++TYN L+D
Sbjct: 441 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLD 500

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              K  R+E+A+ +   +  RGV    STYN L+ G    G       ++ +++ NG   
Sbjct: 501 GLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSP 560

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
             +T N+++ A CK GK+++AV +LD +    + K  P++++Y  +I G C+    ED  
Sbjct: 561 DEITMNMIILAYCKQGKAERAVQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 619

Query: 493 GLLNELLEKGLIP 505
            L   ++ + +IP
Sbjct: 620 ILFERMISERIIP 632



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 14/350 (4%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSD----- 110
           EL  S  + L   LL  ++    +P I + L   VK G F    T F AL   +      
Sbjct: 289 ELSNSGQIELAFSLLAQMLKRGCHPNIHT-LSSLVK-GCFVR-GTTFDALDMWNQMIRGF 345

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
            L  N +  + L+  +  +         F    + G   ++ +   L+    K G  E  
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
            Y++ +M       N+  +  ++  LC+  K  +A  ++E M     +P V T+N  I G
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465

Query: 231 YCKKGGIGKMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            C  G   ++  A+ VF+ M +     PN VT+N L+DG  K   I  A  +  E+   G
Sbjct: 466 LCDAG---RLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +     TYN+L++G C  G    A+ L  +MM +G  P+ +T N +I  +CK+   E+A 
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV 582

Query: 350 VLFDDIS--EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
            + D +S   +   P VI+Y  +I   C+    ED   +   M+   ++P
Sbjct: 583 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 41/327 (12%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           G++     + + M   G   +E  F ++I  + +      A+++F  +   G    V  Y
Sbjct: 89  GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 148

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N +++ L  + ++     +  +M   G +PNV T N L+   CK   V+ A+ L  ++S 
Sbjct: 149 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 208

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
           +G  P+ ++Y T+I + C+ G +++        L     P VS YN LI GL +E + +G
Sbjct: 209 KGCCPNAVSYTTVISSMCEVGMVKEG-----RQLAERFEPVVSVYNALINGLCKERDYKG 263

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK--------------- 462
              +M+E+V  G+   +++Y+ L+  L   G+ + A SLL +M K               
Sbjct: 264 GVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVK 323

Query: 463 --------MEKEKKW----------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
                    +    W          PN+V YN L++GFC  G ++ A  +   + E G  
Sbjct: 324 GCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCS 383

Query: 505 PNQTTYQIVREEMMEKGFIPDIEGHMY 531
           PN  TY  +     ++G    +EG +Y
Sbjct: 384 PNIRTYGSLINGFTKRG---SLEGAVY 407



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 8/229 (3%)

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +T+  +I  L +DG++D    L  +M   G   +     ++I+ + +  L E+A  +F  
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I E G  PSV  YN ++D    E R++  + +   M   G  P+V TYN L+  L +   
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+G + ++ E+ N G     V+Y  ++ ++C+ G  K+   L         E+  P +  
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL--------AERFEPVVSV 247

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           YN LI G C++   +    L++E++EKG+ PN  +Y  +  E+   G I
Sbjct: 248 YNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 230/470 (48%), Gaps = 26/470 (5%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCS-DSLCRNSIIIDMLMLAYV 127
           L H +V     P I  F  +     K    +T     +      +   ++  ++L+  + 
Sbjct: 41  LFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFC 100

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
              +    F    +   +G + +V++   L++      K  D  Y+Y EM  RRI  +  
Sbjct: 101 HMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDV 160

Query: 188 SFNFVLNGLCKA--GKLNKASDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKAD 244
            +  ++NGLCK+  GK   A  +++ M+    V P ++ YN ++ G CK G I +   A 
Sbjct: 161 LYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINE---AR 217

Query: 245 AVFKDMVENGILPNEVTFNTLI----------------DGFCKDENISAAMKVFEEMGSH 288
            +   M+  GI P+  T+++LI                +GFC +  +  A ++F  M   
Sbjct: 218 VLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIER 277

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G    ++ YN L+NG C++ K+ EA  L   M+  G +P+ +T   L++G+C    V++A
Sbjct: 278 GEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEA 337

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           R LF  + E+GL P V +YN LI  YCK  R+ +A  +   M  + ++P++ TYN ++ G
Sbjct: 338 RNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDG 397

Query: 409 LSREGNVEGVRNIMNEL-VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           L + G +     +++E+         + TYNIL+ +LC+    +KA++    +  + +  
Sbjct: 398 LCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL--IFERS 455

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
             PN+ +YN+LI G C+  +L++A  L N +  K L+P+  TY I+ + +
Sbjct: 456 FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDAL 505



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 219/434 (50%), Gaps = 43/434 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F R  D     S++   ++L  + K   +     +Y  M+ + +     +FN ++N  C 
Sbjct: 42  FHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCH 101

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G+++ A  +M  +   G  P VVT+  L+ G+C      KM  A  ++ +MV   I  +
Sbjct: 102 MGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVN---DKMLDALYIYDEMVARRIRFD 158

Query: 259 EVTFNTLIDGFCKDE--NISAAMKVFEEMGSHG-IAAGVVTYNSLINGLCVDGKLDEAVA 315
           +V + TLI+G CK +     AA+++ ++M     +   ++ YN++++GLC DG ++EA  
Sbjct: 159 DVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARV 218

Query: 316 LRDEMMASGLKPNVVTSNALI----------------NGFCKKKLVEKARVLFDDISEQG 359
           L  +M+  G+ P++ T ++LI                NGFC    V++AR LF+ + E+G
Sbjct: 219 LCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERG 278

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
               +I YN L++ YC   ++ +A  + + M++RG  PD  TY  L+ G      V+  R
Sbjct: 279 EQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEAR 338

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
           N+ + ++  G+   + +YNIL+   CK  +  +A++LL++MF    +   PNI+TYN ++
Sbjct: 339 NLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMF---LKNLVPNIITYNSVV 395

Query: 480 KGFCQKGKLEDANGLLNEL-LEKGLIPNQTTYQIVREEM-----------------MEKG 521
            G C+ G + DA  L++E+       P+ TTY I+ E +                  E+ 
Sbjct: 396 DGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERS 455

Query: 522 FIPDIEGHMYNISG 535
           F P++  +   ISG
Sbjct: 456 FAPNVWSYNILISG 469



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 174/332 (52%), Gaps = 10/332 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL       K ++   ++  M  R  + ++ ++N ++NG C   K+ +A  +   M   G
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P  +TY IL+ GYC    I K+ +A  +F  M+E G++P+  ++N LI G+CK E + 
Sbjct: 314 EQPDTITYTILMHGYCL---IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVG 370

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM-MASGLKPNVVTSNAL 335
            AM + E+M    +   ++TYNS+++GLC  G + +A  L DEM       P+V T N L
Sbjct: 371 EAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNIL 430

Query: 336 INGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           +   C+ + VEKA   F   I E+  +P+V +YN LI   CK  R+++A  + N M  + 
Sbjct: 431 LESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
           ++PD+ TYN L+  L     ++    ++ ++V+ G+   L TYNIL+  L K G+ K A 
Sbjct: 491 LVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQ 550

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +      +      P++ TY  +I   C+ G
Sbjct: 551 KI---SLYLSIRGYHPDVKTY--IINELCKGG 577



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 73/354 (20%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
           A A+F  MV+   LP+ V F  ++    K    + A+ ++  M   G+    VT+N LIN
Sbjct: 38  AVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILIN 97

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA----------RVLF 352
             C  G++D A ++  +++  G +PNVVT   L+ GFC    +  A          R+ F
Sbjct: 98  CFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRF 157

Query: 353 DDI----------------------------SEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           DD+                              Q + P++I YNT++   CK+G + +A 
Sbjct: 158 DDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEAR 217

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGN----------------VEGVRNIMNELVNN 428
            + + M+ +G+ PD+ TY+ LI GL R G                 V+  R + N ++  
Sbjct: 218 VLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIER 277

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G +  ++ YNIL+   C + K  +A  L   M +  ++   P+ +TY +L+ G+C   K+
Sbjct: 278 GEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQ---PDTITYTILMHGYCLIDKV 334

Query: 489 EDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           ++A  L + ++E+GL+P+  +Y I                + E+M  K  +P+I
Sbjct: 335 DEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 5/335 (1%)

Query: 69  LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVK 128
           L++ L  A +  ++ S L+ F  N K      +F+ +    +    + I  ++LM  Y  
Sbjct: 238 LIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQ--HDIINYNILMNGYCL 295

Query: 129 NMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS 188
           N K     + F    + G +   ++   L+       K ++   ++  M  R +  ++ S
Sbjct: 296 NNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWS 355

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           +N ++ G CK  ++ +A +++EDM    + P ++TYN ++DG CK GGI   +K      
Sbjct: 356 YNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMH 415

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVD 307
              +    P+  T+N L++  C+ E +  A+  F+ +      A  V +YN LI+G C +
Sbjct: 416 YCCQPP--PDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKN 473

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +LDEA+ L + M    L P++VT N L++     + ++KA  L   I +QG+SP++ TY
Sbjct: 474 RRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTY 533

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           N LI+   K GR + A  +   +  RG  PDV TY
Sbjct: 534 NILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 67/333 (20%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           CK ++I  A+ +F  M        +V +  ++  +        A+ L   M   G+ P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           VT N LIN FC    ++ A  +   I + G  P+V+T+ TL+  +C   +M DA  + + 
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 390 MLDRG--------------------------------------VLPDVSTYNCLIAGLSR 411
           M+ R                                       V P++  YN ++ GL +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD------------E 459
           +GN+   R + ++++  G+   + TY+ L+  LC+ G+ K+  SLL+            E
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 460 MFKMEKEK-KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR---- 514
           +F +  E+ +  +I+ YN+L+ G+C   K+ +A  L + ++E+G  P+  TY I+     
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 515 ------------EEMMEKGFIPDIEGHMYNISG 535
                         M+E+G +PD+  +   I G
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKG 362


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 41/410 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +  V + N L+    K  + +D   V   M+ +    +  ++N ++  LC  GKL+ A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++  + S    P V+TY ILI+    +GG+ +  K   +  +M+  G+ P+  T+NT+I 
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK---LMDEMLSRGLKPDMFTYNTIIR 271

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G CK+  +  A ++   +   G    V++YN L+  L   GK +E   L  +M +    P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           NVVT + LI   C+   +E+A  L   + E+GL+P   +Y+ LI A+C+EGR++ A    
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN------------------------ 423
            +M+  G LPD+  YN ++A L + G  +    I                          
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 424 -----------ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
                      E+++NG+    +TYN ++  LC++G   +A  LL +M   E     P++
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH---PSV 508

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
           VTYN+++ GFC+  ++EDA  +L  ++  G  PN+TTY ++ E +   G+
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 175/326 (53%), Gaps = 9/326 (2%)

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C++G   ++  ++E M   G +P V+    LI G+     I K  +   + +   +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+   +N LI+GFCK   I  A +V + M S   +   VTYN +I  LC  GKLD A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            +++++   +P V+T   LI     +  V++A  L D++  +GL P + TYNT+I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG ++ AF M  ++  +G  PDV +YN L+  L  +G  E    +M ++ +      +VT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y+IL+  LC+DGK ++A++LL    K+ KEK   P+  +Y+ LI  FC++G+L+ A   L
Sbjct: 336 YSILITTLCRDGKIEEAMNLL----KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKG 521
             ++  G +P+   Y  V   + + G
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNG 417



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 183/352 (51%), Gaps = 6/352 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +V++   L+ A + EG  ++   +  EM  R ++ ++ ++N ++ G+CK G +++A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           ++ +++  G  P V++YNIL+     +G   K  + + +   M      PN VT++ LI 
Sbjct: 285 MVRNLELKGSEPDVISYNILLRALLNQG---KWEEGEKLMTKMFSEKCDPNVVTYSILIT 341

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C+D  I  AM + + M   G+     +Y+ LI   C +G+LD A+   + M++ G  P
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++V  N ++   CK    ++A  +F  + E G SP+  +YNT+  A    G    A  M 
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
             M+  G+ PD  TYN +I+ L REG V+    ++ ++ +      +VTYNI++   CK 
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
            + + A+++L+ M         PN  TY VLI+G    G   +A  L N+L+
Sbjct: 522 HRIEDAINVLESMV---GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 180/362 (49%), Gaps = 7/362 (1%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C  ++   +I+I+  ML    +    L  E   R    GLK  + + N ++R + KEG  
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSR----GLKPDMFTYNTIIRGMCKEGMV 279

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    + + ++ +  E ++ S+N +L  L   GK  +   +M  M S    P VVTY+IL
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           I   C+ G   K+ +A  + K M E G+ P+  +++ LI  FC++  +  A++  E M S
Sbjct: 340 ITTLCRDG---KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G    +V YN+++  LC +GK D+A+ +  ++   G  PN  + N + +         +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +  ++   G+ P  ITYN++I   C+EG +++AF +   M      P V TYN ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           G  +   +E   N++  +V NG R    TY +L+  +   G   +A+ L +++ +++   
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576

Query: 468 KW 469
           ++
Sbjct: 577 EY 578



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 20/272 (7%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  N   ++ + E M   G    V+    LI G      + +AV + + +   G +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              NALINGFCK   ++ A  + D +  +  SP  +TYN +I + C  G+++ A  + N 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +L     P V TY  LI     EG V+    +M+E+++ G++  + TYN ++  +CK+G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A  ++     +E +   P++++YN+L++    +GK E+   L+ ++  +   PN  T
Sbjct: 279 VDRAFEMVR---NLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 510 YQIV---------REEMM-------EKGFIPD 525
           Y I+          EE M       EKG  PD
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 198/386 (51%), Gaps = 35/386 (9%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ AL K G  +  E V  EM+ + I  N+ +F+ ++NGL K G + KA+D M +MK  G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449

Query: 217 VSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKAD 244
           + P VVTY  +IDG  K  G                                 GK+ KA+
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A+F++M E G+L + V + TLIDG  K  N+ AA KV +E+    +    V YN  IN L
Sbjct: 510 ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C+ GK  EA +  +EM ++GLKP+ VT N +I    ++    KA  L + +    + P++
Sbjct: 570 CMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNL 629

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITY+TLI    + G +E A  + N M   G  P   T+  ++   S+    + +  I   
Sbjct: 630 ITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEW 689

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++N G+ A +  YN LV  LC +G ++KA+ +L+E   M      P+ +T+N LI G  +
Sbjct: 690 MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEE---MSGRGIAPDTITFNALILGHFK 746

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY 510
            G L++A    +++L  G+ PN  T+
Sbjct: 747 SGHLDNAFSTYDQMLYHGISPNVATF 772



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 222/468 (47%), Gaps = 57/468 (12%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D +  N +   M ++ Y +       F  ++     G+   V++ + L+  L K+G+F +
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +++EM++     N  ++  +++ L KA + N++  ++ ++ S GV   ++ Y  L+D
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK+   GK+ +A  +F+  + +   PN VT+  LID  CK  N+  A +V  EM    
Sbjct: 358 WLCKE---GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT------------------ 331
           I+  VVT++S+INGL   G + +A     EM   G+ PNVVT                  
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474

Query: 332 -----------------SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
                             ++L+NG  K   +EKA  LF +++E+G+    + Y TLID  
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K G +  AF +   + ++ +LPD   YN  I  L   G  +   + + E+ + G++   
Sbjct: 535 FKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQ 594

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTYN ++ A  ++GK+ KA+ LL+    M++    PN++TY+ LI G  + G +E A  L
Sbjct: 595 VTYNTMIAAQSREGKTAKALKLLN---GMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651

Query: 495 LNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           LNE+   G  P   T++ V                 E MM  G   DI
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADI 699



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 217/451 (48%), Gaps = 27/451 (5%)

Query: 104 ALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLR 159
           AL    + LC     N  I+D L+    KN K       F+   + G+    ++   L+ 
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
            L K G       V +E+  + +  +   +N  +N LC  GK  +A   +E+M+S G+ P
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
             VTYN +I    ++G   K  KA  +   M  + I PN +T++TLI G  +   +  A 
Sbjct: 593 DQVTYNTMIAAQSREG---KTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAK 649

Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
            +  EM S G +   +T+  ++       + D  + + + MM +GL  ++   N L+   
Sbjct: 650 YLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVL 709

Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
           C   +  KA V+ +++S +G++P  IT+N LI  + K G +++AF+  + ML  G+ P+V
Sbjct: 710 CYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNV 769

Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           +T+N L+ GL   G +     ++NE+   G+    +TY+ILV    K     +AV L  E
Sbjct: 770 ATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCE 829

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI------- 512
           M     +   P + TYN LI  F + G +  A  L NE+  +G++P   TY I       
Sbjct: 830 MV---GKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSK 886

Query: 513 ------VR---EEMMEKGFIPDIEGHMYNIS 534
                 VR   ++M EKGF P  +G + +IS
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPS-KGTLSSIS 916



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 215/492 (43%), Gaps = 112/492 (22%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E   R G  G    V+  N L+    K G  E    V + MK + + +++  +N ++ GL
Sbjct: 161 EVMVRGGGIG-GLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+AG+++ A D+++ MK  GV P VVTY + I  YC++  +   +   +++++MV  G+L
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAF---SLYEEMVRKGVL 276

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMG------------------------------ 286
           P+ VT + L+ G CKD   S A  +F EM                               
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 287 -----SHGIAAGVVTYNSLINGLCVDGKLDEAV-----ALRD------------------ 318
                S G+   ++ Y +L++ LC +GK+DEA      AL D                  
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 319 ------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
                       EM    + PNVVT +++ING  K+  V KA     ++ E+G+ P+V+T
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 367 YNTLIDA-----------------YC------------------KEGRMEDAFAMRNSML 391
           Y T+ID                   C                  K G++E A A+   M 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +RGVL D   Y  LI GL + GN+     +  EL    +    V YN+ +  LC  GKSK
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           +A S L+E   M+     P+ VTYN +I    ++GK   A  LLN +    + PN  TY 
Sbjct: 577 EAESFLEE---MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYS 633

Query: 512 IVREEMMEKGFI 523
            +   + E G +
Sbjct: 634 TLIVGLFEAGAV 645



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 11/346 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S+N V++G  + G L   + ++ +M   GV    VT N ++ G C+ G   ++ +A A+ 
Sbjct: 105 SYNVVMSGFSEQGGLAPEA-LLAEMCKRGVPFDAVTVNTVLVGLCRDG---RVDRAAALA 160

Query: 248 KDMVENGILP--NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
           + MV  G +   + V +N+L+DG+CK  ++  A  V E M + G+   VV YNSL+ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G++D A  + D M   G++PNVVT    I  +C++  V+ A  L++++  +G+ P V+
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           T + L+   CK+GR  +A+A+   M   G  P+  TY  LI  L++        +++ E+
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME-KEKKWPNIVTYNVLIKGFCQ 484
           V+ G+   L+ Y  L+  LCK+GK  +A     +MF+    +   PN VTY VLI   C+
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEA----KDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
            G ++ A  +L+E+ EK + PN  T+  +   ++++G++     +M
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYM 442



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 200/420 (47%), Gaps = 51/420 (12%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD--SFNFVLNGLCKAGKLN 203
           G+    ++ N +L  L ++G+ +    + + M R      LD   +N +++G CK G + 
Sbjct: 132 GVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDME 191

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE----NGILPNE 259
            A  + E MK+ GV   VV YN L+ G C+ G      + DA  +DMV+    +G+ PN 
Sbjct: 192 TAFAVAERMKAQGVGVDVVGYNSLVAGLCRAG------EVDAA-RDMVDTMKRDGVEPNV 244

Query: 260 VTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
           VT+   I  +C+   +  A  ++EEM   G+   VVT ++L+ GLC DG+  EA AL  E
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE 304

Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
           M   G  PN VT   LI+   K +   ++  L  ++  +G+   +I Y  L+D  CKEG+
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           +++A  M    L     P+  TY  LI  L + GNV+G   +++E+    +   +VT++ 
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG-----------------F 482
           ++  L K G   KA    D M +M++    PN+VTY  +I G                  
Sbjct: 425 IINGLVKRGWVGKAT---DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481

Query: 483 CQ------------------KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
           C+                   GK+E A  L  E+ E+G++ +   Y  + + + + G +P
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 38/353 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GLK   ++ N ++ A  +EGK      +   MKR  I+ NL +++ ++ GL +AG + KA
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA 648

Query: 206 SDIMEDMKSLGVSPKVVT-----------------------------------YNILIDG 230
             ++ +M S G SP  +T                                   YN L+  
Sbjct: 649 KYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRV 708

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            C  G      KA  V ++M   GI P+ +TFN LI G  K  ++  A   +++M  HGI
Sbjct: 709 LCYNG---MTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           +  V T+N+L+ GL   G++ E+  + +EM   G++P+ +T + L+ G+ K+    +A  
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L+ ++  +G  P V TYN LI  + K G M  A  + N M +RGVLP   TY+ L++G S
Sbjct: 826 LYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWS 885

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
           +  N   VR  + ++   G      T + +  A  K G S +A  LL  ++K+
Sbjct: 886 KLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 208/418 (49%), Gaps = 47/418 (11%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN----------- 194
           G+K + ++ N LL+   +  + E  E V   +    + +N+D  ++V++           
Sbjct: 390 GMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSA 449

Query: 195 ------------------------GLCKAGKLNKASDIMEDMKSL-GVSPKVVTYNILID 229
                                   GLCK    ++A ++   + ++ G++   VT N L+ 
Sbjct: 450 LKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G C++G + ++++   V K M+E G+L + +++NTLI G CK   I  A K+ EEM    
Sbjct: 510 GLCERGNMEEVFE---VLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE 566

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                 TYN L+ GL   GK+D+   L  E    G  PNV T   L+ G+CK   +E A 
Sbjct: 567 FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAV 626

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
             F ++  + +  S + YN LI AYC+ G + +AF +R++M  RG+LP  +TY+ LI G+
Sbjct: 627 KFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGM 686

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G V+  + I  E+ N G+   +  Y  L+G  CK G+     S+L E   M      
Sbjct: 687 CCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLE---MSSNGIR 743

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
           PN +TY ++I G+C+ G +++A  LLNE++  G+ P+  TY       ++KG+  + E
Sbjct: 744 PNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYN-----ALQKGYCKERE 796



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 257/572 (44%), Gaps = 69/572 (12%)

Query: 6   NSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLL 65
           +S  + I   +  HH+ +L  +   TV         +P     +F ++T+      ++  
Sbjct: 70  SSKCKSILPHLTPHHFDRLFLSLHRTV---------NPKTTHEFFRFATRHCNFRFTVRS 120

Query: 66  TGRLLHSLVVAKKYPKIRSFLHMFVKNGKFT---SVSTIFH-----------ALSTCSDS 111
              LL SL+     P+ R  L   +     T     +T FH            L+  SD 
Sbjct: 121 YCLLLRSLLADSFVPRARFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDE 180

Query: 112 LCRNSI-IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
                + ++  ++ +  K +     F+ F      G+   + +CN LL +LVK  +    
Sbjct: 181 QRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKS 240

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             V+ ++  + +  ++ +F   +N  CK G++  A D+   M+ LGV P VVTYN +IDG
Sbjct: 241 YEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDG 299

Query: 231 YCKKGGIGKMYKADAVFKD-MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             K G   +  +    FKD MV + + P+ VT+  LI G  K E    A +V  EM S G
Sbjct: 300 LFKSGRFEEALR----FKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMG 355

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            A   V +N+LI+G C  G + EA+ +RDEM   G+KPN VT N L+ GFC+   +E+A 
Sbjct: 356 FAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAE 415

Query: 350 VLFDDISEQGLSPS--VITY---------------------------------NTLIDAY 374
            +   I   GLS +  V +Y                                   L+   
Sbjct: 416 QVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL 475

Query: 375 CK-EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           CK EG  E           +G+  +  T N L+ GL   GN+E V  ++ +++  G+   
Sbjct: 476 CKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLD 535

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
            ++YN L+   CK GK ++A  L +EM + E +   P+  TYN L+KG    GK++D + 
Sbjct: 536 RISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQ---PDTYTYNFLMKGLADMGKIDDVHR 592

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           LL+E  E G +PN  TY ++ E   +   I D
Sbjct: 593 LLHEAKEYGFVPNVYTYALLLEGYCKADRIED 624



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 226/463 (48%), Gaps = 58/463 (12%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A+ K  +     + F +    G+  +V++ N ++  L K G+FE+       M R ++  
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           ++ ++  +++GL K     +A++++ +M S+G +P  V +N LIDGYC+KG +G+  +  
Sbjct: 324 SVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR-- 381

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG--VVTY----- 297
            V  +M   G+ PN VTFNTL+ GFC+   +  A +V   + S G++    V +Y     
Sbjct: 382 -VRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRL 440

Query: 298 ----------------------------NSLINGLCVDGKLDEAVALRDEMMA-SGLKPN 328
                                         L+ GLC      EA+ L  ++ A  GL  N
Sbjct: 441 MERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAAN 500

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            VTSNAL++G C++  +E+   +   + E+GL    I+YNTLI   CK G++E+AF ++ 
Sbjct: 501 TVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKE 560

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            M+ +   PD  TYN L+ GL+  G ++ V  +++E    G    + TY +L+   CK  
Sbjct: 561 EMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKAD 620

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           + + AV        ++ EK   + V YN+LI  +C+ G + +A  L + +  +G++P   
Sbjct: 621 RIEDAVKFFK---NLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCA 677

Query: 509 TY----------------QIVREEMMEKGFIPDIEGHMYNISG 535
           TY                + + EEM  +G +P++  +   I G
Sbjct: 678 TYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGG 720



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 225/501 (44%), Gaps = 79/501 (15%)

Query: 88  MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           MF K G       +F  L TC           ++L+ + VK  + H  +E F  A   G+
Sbjct: 211 MFSKRG-------VFPCLKTC-----------NLLLSSLVKANELHKSYEVFDLACQ-GV 251

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
              V +    + A  K G+  D   ++ +M+   +  N+ ++N V++GL K+G+  +A  
Sbjct: 252 APDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALR 311

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             + M    V+P VVTY +LI G  K   +    +A+ V  +M   G  PNEV FN LID
Sbjct: 312 FKDRMVRSKVNPSVVTYGVLISGLMK---LEMFEEANEVLVEMYSMGFAPNEVVFNALID 368

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+C+  ++  A++V +EM   G+    VT+N+L+ G C   ++++A  +   +++SGL  
Sbjct: 369 GYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV 428

Query: 328 N----------------------VVTS-------------NALINGFCK-KKLVEKARVL 351
           N                      +VT                L+ G CK +   E   + 
Sbjct: 429 NMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELW 488

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F   + +GL+ + +T N L+   C+ G ME+ F +   ML++G+L D  +YN LI G  +
Sbjct: 489 FKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCK 548

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-P 470
            G +E    +  E+V    +    TYN L+  L   GK      LL E     KE  + P
Sbjct: 549 WGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE----AKEYGFVP 604

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VR 514
           N+ TY +L++G+C+  ++EDA      L  + +  +   Y I                +R
Sbjct: 605 NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLR 664

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
           + M  +G +P    +   I G
Sbjct: 665 DAMKSRGILPTCATYSSLIHG 685



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 62/415 (14%)

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKL---NKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
           E+ +   E  L   + +L+ LC   K      A DI       GV P + T N+L+    
Sbjct: 173 ELNQGSDEQRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLV 232

Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
           K   + K Y+   VF D+   G+ P+  TF T I+ FCK   +  A+ +F +M   G+  
Sbjct: 233 KANELHKSYE---VF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFP 288

Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
            VVTYN++I+GL   G+ +EA+  +D M+ S + P+VVT   LI+G  K ++ E+A  + 
Sbjct: 289 NVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVL 348

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
            ++   G +P+ + +N LID YC++G M +A  +R+ M  +G+ P+  T+N L+ G  R 
Sbjct: 349 VEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRS 408

Query: 413 GNVEGVRNIMNELVNNGM----------------RAGLVTY----------NI------- 439
             +E    ++  ++++G+                R+G V+           NI       
Sbjct: 409 NQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLL 468

Query: 440 --LVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLN 496
             LV  LCK     +A+ L    FK+   K    N VT N L+ G C++G +E+   +L 
Sbjct: 469 TPLVVGLCKCEGHSEAIEL---WFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLK 525

Query: 497 ELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
           ++LEKGL+ ++ +Y                  ++EEM+++ F PD   + + + G
Sbjct: 526 QMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKG 580



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           +L+  Y K  +     + FK      ++ S +  N L+ A  + G   +   +   MK R
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            I     +++ +++G+C  G++++A +I E+M++ G+ P V  Y  LI G+CK   +G+M
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCK---LGQM 727

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
               ++  +M  NGI PN++T+  +IDG+CK  N+  A ++  EM  +GIA   VTYN+L
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787

Query: 301 INGLCVDGKL 310
             G C + +L
Sbjct: 788 QKGYCKEREL 797



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 24/248 (9%)

Query: 68  RLLHSLVVAKKY---PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
           RLLH    AK+Y   P + ++   L  + K  +       F  L      L  +S++ ++
Sbjct: 592 RLLHE---AKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVEL--SSVVYNI 646

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+ AY +       F+        G+  +  + + L+  +   G+ ++ + +++EM+   
Sbjct: 647 LIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEG 706

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +  N+  +  ++ G CK G+++    I+ +M S G+ P  +TY I+IDGYCK   +G M 
Sbjct: 707 LLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK---LGNMK 763

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV-----VT 296
           +A  +  +M+ NGI P+ VT+N L  G+CK+  ++  ++       H    G+     +T
Sbjct: 764 EARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ-----SDHKSNIGLPLEEEIT 818

Query: 297 YNSLINGL 304
           YN+LI+ L
Sbjct: 819 YNTLIHKL 826


>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 375

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 193/351 (54%), Gaps = 8/351 (2%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G  +  E VY EM   ++  +   +N +LNG  + G++    ++ E M   G S  V 
Sbjct: 2   ESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNVA 60

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           ++NI++ G    G + ++    ++++ M+ENG   + +T+  L+DG CK+   + ++ V 
Sbjct: 61  SFNIMMRGLFDNGEVDQVI---SIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVL 117

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E     G      +Y+++INGLC + KLDEAV++   M+ +G KPN    NALINGF   
Sbjct: 118 EIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGA 177

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
              E A  +F ++     SP+++TYNTLI+  CK  R  +A+ +   ML++G  P VSTY
Sbjct: 178 SKFEDATRVFREMGTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTY 236

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + L+ GL     ++   N+ N+++  G +  +  +NIL+  LC  GK++ A+SL    F 
Sbjct: 237 SLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLY---FN 293

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           M      PN+VTYN L++GF + G L +A  +   +L  GL P+  +Y I 
Sbjct: 294 MNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNIT 344



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 187/365 (51%), Gaps = 13/365 (3%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D++  N+++     +  +KN      FE ++  G  G ++ V S N ++R L   G+ + 
Sbjct: 24  DAVVYNAMLNGYFRVGRIKNC-----FELWELMGRKGSRN-VASFNIMMRGLFDNGEVDQ 77

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  +++ M       +  ++  +++GLCK G  NK+  ++E  +  G      +Y+ +I+
Sbjct: 78  VISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMIN 137

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G CK+    K+ +A +V   MV+NG  PN   +N LI+GF        A +VF EMG+H 
Sbjct: 138 GLCKEA---KLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREMGTH- 193

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            +  +VTYN+LINGLC   +  EA  L  EM+  G KP V T + L+ G C    ++ A 
Sbjct: 194 CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAI 253

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L++ +  +G  P V  +N LI   C  G+ + A ++  +M      P++ TYN L+ G 
Sbjct: 254 NLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGF 313

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            ++G++     I   ++ NG++  +++YNI +  LC   +   A+  L +      +K  
Sbjct: 314 YKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAV---TKKLV 370

Query: 470 PNIVT 474
           P I+T
Sbjct: 371 PTIIT 375



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 21/282 (7%)

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C+  +   A +V+ EM  + ++   V YN+++NG    G++     L + M   G + NV
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NV 59

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
            + N ++ G      V++   +++ + E G     ITY  L+D  CK G    +  +   
Sbjct: 60  ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
              +G + D  +Y+ +I GL +E  ++   ++++ +V NG +     YN L+       K
Sbjct: 120 AEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASK 179

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
            + A  +  EM         PNIVTYN LI G C+  +  +A  L+ E+LEKG  P  +T
Sbjct: 180 FEDATRVFREMGTHCS----PNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVST 235

Query: 510 YQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
           Y ++ +                +++ KGF PD++ H   I G
Sbjct: 236 YSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHG 277


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 24/430 (5%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S     V++G    V T    LS   D LCR+    +               +  F+   
Sbjct: 278 SLYEGMVRSGVLPDVVT----LSALVDGLCRDGQFSE--------------AYALFREMD 319

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G+  + ++   L+ +L K  +  +   +  EM  R + ++L  +  +++ L K GK+ 
Sbjct: 320 KIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIE 379

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D++   +S  ++P  VTY +L+D +C+ G I     A+ V   M E  ++PN VTF+
Sbjct: 380 EAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDG---AEQVLLQMEEKSVIPNVVTFS 436

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           ++I+G  K   +  A     +M   GIA  VVTY +LI+G       + A+ +  +M+  
Sbjct: 437 SIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHE 496

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++ N    ++L+NG  K   +E A  LF D+ E+GL    + Y TL+D   K G M  A
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F +   ++++ + PD   YN  I  L   G     ++ + E+ N G+     TYN ++ A
Sbjct: 557 FKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA 616

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C++GK+ KA+ LL E   M++    PN++TY  L+ G  + G ++ A  LLNE+   G 
Sbjct: 617 RCREGKTSKALKLLKE---MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGF 673

Query: 504 IPNQTTYQIV 513
            P   T+Q V
Sbjct: 674 APTSLTHQRV 683



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 35/386 (9%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A  + G  +  E V  +M+ + +  N+ +F+ ++NGL K G L KA+D M  MK  G
Sbjct: 403 LVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSG 462

Query: 217 VSPKVVTYNILIDGYCKKGGI--------------------------------GKMYKAD 244
           ++P VVTY  LIDG+ K  G                                 G +  A+
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A+FKDM E G+L + V + TL+DG  K  N+ AA KV +E+    ++   V YN  IN L
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  GK  EA +   EM  +GL+P+  T N +I   C++    KA  L  ++    + P++
Sbjct: 583 CTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITY TL+    + G ++ A  + N M   G  P   T+  ++   S     + +  I   
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHEL 702

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           ++  G+ A +  YN LV  LC  G ++ A  +LDEM         P+ +T+N LI G C+
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML---TRGIAPDTITFNALILGHCK 759

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY 510
              L++A  +  ++L +GL PN  T+
Sbjct: 760 SSHLDNAFAIYAQMLHQGLSPNIATF 785



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 189/344 (54%), Gaps = 6/344 (1%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK-ADAV 246
           S+N  L  L + G    A  ++ +M   GVS   VT +  + G C+ G +G+    A+ +
Sbjct: 117 SYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEML 176

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
            +    +G+  + V +N LIDG+CK ++++AA+ V E M + G+A  VV YNSL+ G   
Sbjct: 177 VRGRGIDGL--DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFH 234

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G  D A+ + + M A G++PNVVT  ALI  +CK K +++A  L++ +   G+ P V+T
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            + L+D  C++G+  +A+A+   M   GV P+  TY  LI  L++         ++ E+V
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
           + G+   LV Y  L+  L K+GK ++A  +L      + +   PN VTY VL+   C+ G
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRH---AQSDNITPNFVTYTVLVDAHCRAG 411

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
            ++ A  +L ++ EK +IPN  T+  +   ++++G +     +M
Sbjct: 412 NIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+ ++D L+    KN         FK   + GL    ++   L+  L K G       V 
Sbjct: 501 NNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVG 560

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           +E+  + +  +   +N  +N LC  GK ++A   +++M++ G+ P   TYN +I   C++
Sbjct: 561 QELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCRE 620

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G   K  KA  + K+M  N I PN +T+ TL+ G  +   +  A  +  EM S G A   
Sbjct: 621 G---KTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTS 677

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           +T+  ++       + D  + + + MM +GL  ++   N L++  C   +   A V+ D+
Sbjct: 678 LTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDE 737

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G++P  IT+N LI  +CK   +++AFA+   ML +G+ P+++T+N L+ GL   G 
Sbjct: 738 MLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGR 797

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +     +++++   G+    +TY+ILV    K     +A+ L  EM     +   P   T
Sbjct: 798 IGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV---SKGFIPKAST 854

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           YN L+  F + G +  A  L +E+  +G++   +TY I+
Sbjct: 855 YNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL 893



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 197/374 (52%), Gaps = 6/374 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+  N L+    K         V + M  + + L++  +N ++ G   +G  + A +++E
Sbjct: 187 VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE 246

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            MK+ GV P VVTY  LI  YCK  G   M +A ++++ MV +G+LP+ VT + L+DG C
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKG---MDEAFSLYEGMVRSGVLPDVVTLSALVDGLC 303

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           +D   S A  +F EM   G+A   VTY +LI+ L    +  E++ L  EM++ G+  ++V
Sbjct: 304 RDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLV 363

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
              AL++   K+  +E+A+ +        ++P+ +TY  L+DA+C+ G ++ A  +   M
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
            ++ V+P+V T++ +I GL + G +    + M ++ ++G+   +VTY  L+    K    
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + A+ +  +M     E    N    + L+ G  + G +E A  L  ++ E+GL+ +   Y
Sbjct: 484 EAALDVYRDML---HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 511 QIVREEMMEKGFIP 524
             + + + + G +P
Sbjct: 541 TTLMDGLFKTGNMP 554



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 38/360 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K   + GL+    + N ++ A  +EGK      + KEMKR  I+ NL ++  ++ GL +
Sbjct: 595 LKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLE 654

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVT----------------------------------- 223
           AG + KA  ++ +M S G +P  +T                                   
Sbjct: 655 AGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITV 714

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN L+   C  G       A  V  +M+  GI P+ +TFN LI G CK  ++  A  ++ 
Sbjct: 715 YNTLVHVLCCHG---MARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYA 771

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           +M   G++  + T+N+L+ GL   G++ EA  +  +M   GL+PN +T + L+ G+ KK 
Sbjct: 772 QMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKS 831

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
              +A  L+ ++  +G  P   TYN+L+  + K G M  A  + + M  RGVL   STY+
Sbjct: 832 NKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 891

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            L+ G S+  N   VR ++ ++   G +    T + +  A  + G + +A  LL  +FK+
Sbjct: 892 ILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 9/259 (3%)

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHG----IAAGVVTYNSLINGLCVDGKLDEA 313
           + +T N++I  +C   ++  A+ +            +AA  V+YN  +  L   G    A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSP-SVITYNTLI 371
             +  EM   G+  + VT +  + G C+  LV +A  L +  +  +G+    V+ +N LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           D YCK   M  A A+   M  +GV  DV  YN L+AG    G+ +    ++  +  +G+ 
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTY  L+G  CK     +A SL + M    +    P++VT + L+ G C+ G+  +A
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMV---RSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 492 NGLLNELLEKGLIPNQTTY 510
             L  E+ + G+ PN  TY
Sbjct: 312 YALFREMDKIGVAPNHVTY 330


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +G+K +    N LL    ++     V  V KEM+   +E  + ++  +++GL  AG ++K
Sbjct: 162 HGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISK 221

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              + +++K   V+  V  Y+ +I+ YC+ G +    +A  VF + V NGI PNE T+  
Sbjct: 222 VESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV---RRASEVFDECVGNGIEPNERTYGA 278

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LI+GFCK   I AA  +  +M   G+    + +N++I+G C  G +D+A+ ++  M   G
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG 338

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           ++ +V T N L  G C+   +E A+ L   ++E G+  + ++Y TLI  + KEG M +A 
Sbjct: 339 IQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEAR 398

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            +   M  +G  P V TYN +I G  + G++        E+   G+   + TY  LV   
Sbjct: 399 RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGH 458

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           C +GK   A+ L +E   M++    PN+V Y  LI G  ++G+ E+A    + +L  GL 
Sbjct: 459 CVNGKVDVALRLFEE---MKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLT 515

Query: 505 PNQTTYQIV 513
           P+ T Y ++
Sbjct: 516 PDDTLYSML 524



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 198/372 (53%), Gaps = 10/372 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS + ++    K G+ +D   +  EM R  ++LN   +N +L+   +     + ++++++
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+S GV P V TY IL+DG    G I K+   ++VF ++    +  +   ++ +I+ +C+
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKV---ESVFDEIKRKNVAGDVYFYSAVINAYCR 250

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A +VF+E   +GI     TY +LING C  G+++ A  L  +M   G+  N + 
Sbjct: 251 AGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQII 310

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+G+C+  +V+KA  +   +   G+   V TYNTL    C+  RMEDA  + + M 
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           + GV  +  +Y  LI+  S+EG++   R +  ++   G R  +VTYN+++    K G  +
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430

Query: 452 KAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +A     E FK E EKK   P++ TY  L+ G C  GK++ A  L  E+ ++G  PN   
Sbjct: 431 EA-----ERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485

Query: 510 YQIVREEMMEKG 521
           Y  +   + ++G
Sbjct: 486 YTALISGLAKEG 497



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+   + L+  Y +        E  K     G++ +V +   L+  L   G    VE V+
Sbjct: 167 NACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVF 226

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            E+KR+ +  ++  ++ V+N  C+AG + +AS++ ++    G+ P   TY  LI+G+CK 
Sbjct: 227 DEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCK- 285

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
             IG++  A+ +  DM   G+  N++ FNT+IDG+C+   +  A+++   M   GI   V
Sbjct: 286 --IGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDV 343

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN+L  GLC   ++++A  L   M  +G++ N V+   LI+   K+  + +AR LF D
Sbjct: 344 YTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRD 403

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +  +G  PSV+TYN +ID Y K G + +A   +  M  +G++PDV TY  L+ G    G 
Sbjct: 404 MEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGK 463

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           V+    +  E+   G +  +V Y  L+  L K+G+S++A    D M         P+   
Sbjct: 464 VDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAA---GLTPDDTL 520

Query: 475 YNVLI 479
           Y++L+
Sbjct: 521 YSMLV 525



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 162/317 (51%), Gaps = 12/317 (3%)

Query: 136 FEAFKR---AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
           F+  KR   AGD    S+V++      A  + G       V+ E     IE N  ++  +
Sbjct: 226 FDEIKRKNVAGDVYFYSAVIN------AYCRAGNVRRASEVFDECVGNGIEPNERTYGAL 279

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           +NG CK G++  A  ++ DM+  GV    + +N +IDGYC+ G + K  +  AV + M  
Sbjct: 280 INGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERM-- 337

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            GI  +  T+NTL  G C+   +  A K+   M  +G+ +  V+Y +LI+    +G + E
Sbjct: 338 -GIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVE 396

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A  L  +M   G +P+VVT N +I+G+ K   + +A     ++ ++GL P V TY  L+ 
Sbjct: 397 ARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVH 456

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
            +C  G+++ A  +   M  RG  P+V  Y  LI+GL++EG  E      + ++  G+  
Sbjct: 457 GHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTP 516

Query: 433 GLVTYNILVGALCKDGK 449
               Y++LVG+L  D +
Sbjct: 517 DDTLYSMLVGSLHTDKR 533



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 15/322 (4%)

Query: 93  GKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG-----FEAFKRAGDYGL 147
           G  + V ++F       D + R ++  D+   + V N     G      E F      G+
Sbjct: 217 GDISKVESVF-------DEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGI 269

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + +  +   L+    K G+ E  E +  +M+ R +  N   FN +++G C+ G ++KA +
Sbjct: 270 EPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALE 329

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           I   M+ +G+   V TYN L  G C+   + +M  A  +   M ENG+  N V++ TLI 
Sbjct: 330 IKAVMERMGIQLDVYTYNTLACGLCR---VNRMEDAKKLLHIMTENGVESNYVSYTTLIS 386

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
              K+ ++  A ++F +M   G    VVTYN +I+G    G + EA   + EM   GL P
Sbjct: 387 IHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVP 446

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +V T  AL++G C    V+ A  LF+++ ++G  P+V+ Y  LI    KEGR E+AF   
Sbjct: 447 DVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFY 506

Query: 388 NSMLDRGVLPDVSTYNCLIAGL 409
           ++ML  G+ PD + Y+ L+  L
Sbjct: 507 DNMLAAGLTPDDTLYSMLVGSL 528



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 172/346 (49%), Gaps = 27/346 (7%)

Query: 200 GKLNKASDIMEDMKSLGVSPKVVT---YNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           G L  A++++   K+L   P  +T    ++++DG+CK G   +M  A  +  +M  +G+ 
Sbjct: 111 GHLLPAAELLR--KALASCPGCITPLSASVVVDGFCKAG---RMDDARRLLDEMPRHGVK 165

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            N   +N L+D + + +N +   +V +EM S G+   V TY  L++GL   G + +  ++
Sbjct: 166 LNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESV 225

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DE+    +  +V   +A+IN +C+   V +A  +FD+    G+ P+  TY  LI+ +CK
Sbjct: 226 FDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCK 285

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G++E A  +   M  RGV  +   +N +I G  R G V+    I   +   G++  + T
Sbjct: 286 IGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYT 345

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L   LC+  + + A  LL  M +   E    N V+Y  LI    ++G + +A  L  
Sbjct: 346 YNTLACGLCRVNRMEDAKKLLHIMTENGVES---NYVSYTTLISIHSKEGDMVEARRLFR 402

Query: 497 ELLEKGLIPNQTTYQI----------VRE------EMMEKGFIPDI 526
           ++  KG  P+  TY +          +RE      EM +KG +PD+
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDV 448


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 193/366 (52%), Gaps = 7/366 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           YG      +C  ++R+L ++G+F+DV   ++ M       N+ ++   ++GLCK   + +
Sbjct: 102 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 161

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL-PNEVTFN 263
           A  ++E+M   G+ P V T+  LIDG CK   IG   +A  +F  ++++    PN  T+ 
Sbjct: 162 AFHVLEEMVGRGLKPNVYTHTTLIDGLCK---IGWTERAFRLFLKLIKSSSYKPNVHTYT 218

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +I G+C++  ++ A  +   M   G+     TY +LI G C  G  D A  L ++M   
Sbjct: 219 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 278

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+ T NA+I+GFCKK  +++A  +    + QGL    ITY  LI  +CK+G +  A
Sbjct: 279 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 338

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M++ G  PD+  Y  LI+   ++  +E  +   ++ +  G+     TY  ++  
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G+S  A+ + +   +M +   + + +TY  LI G C++ +LE+A  L   +L+K L
Sbjct: 399 YCKVGRSTLALRVFE---RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 455

Query: 504 IPNQTT 509
           +P + T
Sbjct: 456 VPCEVT 461



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 185/367 (50%), Gaps = 7/367 (1%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           +GL   V + N +LR  ++ G F     V+  M R  +      F  ++   C+ GK+ +
Sbjct: 32  HGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEE 91

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++  M   G S    T  +++   C+K   G+       F+ M+E G  PN V +  
Sbjct: 92  VDALLAAMWRYGFSLDNATCTVVVRSLCEK---GRFKDVSEFFRRMLETGTPPNVVNYTA 148

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-AS 323
            IDG CK   +  A  V EEM   G+   V T+ +LI+GLC  G  + A  L  +++ +S
Sbjct: 149 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 208

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KPNV T   +I G+C++  + +A +L   + EQGL P+  TY TLI  +CK G  + A
Sbjct: 209 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRA 268

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           F + N M   G LP++ TYN +I G  ++G ++    ++    + G++   +TY IL+  
Sbjct: 269 FELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITE 328

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            CK G    A+ L D   +M +    P+I  Y  LI  +CQ+ ++E++    ++ L  GL
Sbjct: 329 HCKQGHITYALDLFD---RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 385

Query: 504 IPNQTTY 510
           +P + TY
Sbjct: 386 LPTKQTY 392



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 18/424 (4%)

Query: 91  KNGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
           + G+F  VS  F  +    T  + +   + I  +    YVK       F   +     GL
Sbjct: 120 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ-----AFHVLEEMVGRGL 174

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVY-KEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
           K +V +   L+  L K G  E    ++ K +K    + N+ ++  ++ G C+ GKL +A 
Sbjct: 175 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 234

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            ++  M   G+ P   TY  LI G+CK G   + ++   +   M + G LPN  T+N +I
Sbjct: 235 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE---LMNKMKQEGFLPNIYTYNAVI 291

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
           DGFCK   I  A KV     S G+    +TY  LI   C  G +  A+ L D M+ +G  
Sbjct: 292 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 351

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P++    +LI+ +C+++ +E+++  FD     GL P+  TY ++I  YCK GR   A  +
Sbjct: 352 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 411

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              M+  G   D  TY  LI+GL +E  +E  + +   +++  +    VT   L    C+
Sbjct: 412 FERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCR 471

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             K+  AVS+LD + K ++      + T +V+++     G ++ A+  L ++L++    +
Sbjct: 472 REKTSIAVSVLDRLDKRQQ------VHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVD 525

Query: 507 QTTY 510
             TY
Sbjct: 526 HATY 529



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 27/356 (7%)

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--GKMYKADAVFKDMVENGI 255
           +AG+L +A+D++ +M+S G+   V T N ++     + G+  G    A  VF  M   G+
Sbjct: 15  EAGRLPEAADMVLEMRSHGLPLCVETANWVL-----RVGLETGSFVYARKVFDGMTRAGV 69

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P    F  L+   C++  +     +   M  +G +    T   ++  LC  G+  +   
Sbjct: 70  SPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 129

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
               M+ +G  PNVV   A I+G CK++ V++A  + +++  +GL P+V T+ TLID  C
Sbjct: 130 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 189

Query: 376 KEGRMEDAFAMRNSMLDRGVL-PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           K G  E AF +   ++      P+V TY  +I G  REG +     ++  +V  G++   
Sbjct: 190 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 249

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
            TY  L+G  CK G   +A  L++   KM++E   PNI TYN +I GFC+KGK+++A  +
Sbjct: 250 NTYTTLIGGHCKGGSFDRAFELMN---KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 306

Query: 495 LNELLEKGLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNIS 534
           L     +GL  ++ TY I+  E                M+E G  PDIE +   IS
Sbjct: 307 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 20/284 (7%)

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           ++  F +   +  A  +  EM SHG+   V T N ++      G    A  + D M  +G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           + P      AL+   C++  VE+   L   +   G S    T   ++ + C++GR +D  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                ML+ G  P+V  Y   I GL +   V+   +++ E+V  G++  + T+  L+  L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
           CK G +++A  L  ++ K    K  PN+ TY V+I G+C++GKL  A  LL  ++E+GL 
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 246

Query: 505 PNQTTYQI----------------VREEMMEKGFIPDIEGHMYN 532
           PN  TY                  +  +M ++GF+P+I  + YN
Sbjct: 247 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNI--YTYN 288


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 247/537 (45%), Gaps = 85/537 (15%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCR-NSIIIDMLML 124
           L   +VVA   P+  +    +     +G+F     +F  +       CR N     +L+ 
Sbjct: 138 LYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKG---CRPNEFSFGILVR 194

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
            Y +        E     G +G++ + +  N L+ +  +EG+ E+ E + + M+   +  
Sbjct: 195 GYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFP 254

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMK---SLGVS-PKVVTYNILIDGYCKKGGI--- 237
           ++ +FN  ++ LC AGK+ +AS I  DM+    LG+  P + T+N++++G+CK+G +   
Sbjct: 255 DVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEA 314

Query: 238 -----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                                        GK+ +A    K+MV+ GI PN  +FNT++DG
Sbjct: 315 KTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDG 374

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+  IS A  +   M S GI    VTY++L++G C  GK+ +A  +  EMM  G  PN
Sbjct: 375 LCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPN 434

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T N L++   K+  + +A  L   ++E+      +T N +ID  CK G++++A  +  
Sbjct: 435 TYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVE 494

Query: 389 SMLDRG-----------------------VLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            M   G                        LPD+ TY+ +I GL + G ++  R    E+
Sbjct: 495 GMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEM 554

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
           V   +    + Y+  + + CK GK   A  +L +M   EK     ++ TYN LI G   K
Sbjct: 555 VGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM---EKRGCNKSLQTYNSLILGLGSK 611

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPDI 526
            ++ +  GLL+++ EKG+ PN  TY                  + +EM++KG  P+I
Sbjct: 612 NQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNI 668



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 204/385 (52%), Gaps = 14/385 (3%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS---FNFVLNGLCKAGKLNKAS 206
           S +S   L+R L K G   D+ +   +  R ++  N      +N VL    +  K++  S
Sbjct: 78  SHVSLIALIRILAKSG-LSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFS 136

Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
            + +DM   GVSP+  T N+LI G C  G   +   A  VF  M   G  PNE +F  L+
Sbjct: 137 WLYKDMVVAGVSPETYTLNLLIAGLCDSG---RFEDAREVFDKMGVKGCRPNEFSFGILV 193

Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
            G+C+      A+++ + MGS G+    V YN+LI+  C +G+ +EA  L + M   GL 
Sbjct: 194 RGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLF 253

Query: 327 PNVVTSNALINGFCKK-KLVEKARVLFD-DISEQ-GLS-PSVITYNTLIDAYCKEGRMED 382
           P+VVT N+ I+  C   K++E +R+  D  I E+ GL  P++ T+N +++ +CKEG +E+
Sbjct: 254 PDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEE 313

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +  SM   G L ++ +YN  + GL R G +   +  + E+V+ G+   + ++N ++ 
Sbjct: 314 AKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMD 373

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LCK+G    A  ++  M         P+ VTY+ L+ G C  GK+  AN +L+E++ +G
Sbjct: 374 GLCKNGLISDARMIMGLMIS---SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430

Query: 503 LIPNQTTYQIVREEMMEKGFIPDIE 527
             PN  T  I+   + ++G I + E
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAE 455



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 216/434 (49%), Gaps = 41/434 (9%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM-----LMLAYVKNMK 131
           P I +F   L  F K G      T+        +S+ RN  ++++      +L  V+N K
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLV-------ESMKRNGNLMELESYNIWLLGLVRNGK 345

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
                 A K   D G++ ++ S N ++  L K G   D   +   M    I  +  +++ 
Sbjct: 346 LLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYST 405

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           +L+G C  GK+ KA++I+ +M   G SP   T NIL+    K+   G++++A+ + + M 
Sbjct: 406 LLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE---GRIFEAEKLLQKMN 462

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           E     + VT N +IDG CK   +  A+++ E M  HG AA     NS I      G +D
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI------GLVD 516

Query: 312 EAVALRDEMMASGLK--PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
            +        ++G K  P+++T + +ING CK   +++AR  F ++  + L P  I Y+T
Sbjct: 517 SS--------SNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDT 568

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
            I ++CK G++  AF +   M  RG    + TYN LI GL  +  +  +  +++++   G
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
           +   + TYN ++  LC+ G+ K A SLLDEM    ++   PNI ++ +LIK FC+     
Sbjct: 629 ITPNICTYNNMISCLCEGGRIKDATSLLDEML---QKGISPNISSFRLLIKAFCKASDF- 684

Query: 490 DANGLLNELLEKGL 503
              G++ E+ E  L
Sbjct: 685 ---GVVKEVFEIAL 695



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 242/560 (43%), Gaps = 121/560 (21%)

Query: 68  RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSD-SLCRNSIIIDMLM 123
           RL+  +     +P + +F   +      GK    S IF  +    +  L R +I    LM
Sbjct: 242 RLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLM 301

Query: 124 L-AYVKN---MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
           L  + K     +     E+ KR G+      + S N  L  LV+ GK  + +   KEM  
Sbjct: 302 LEGFCKEGMLEEAKTLVESMKRNGNL---MELESYNIWLLGLVRNGKLLEAQLALKEMVD 358

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           + IE N+ SFN V++GLCK G ++ A  IM  M S G+ P  VTY+ L+ G C     GK
Sbjct: 359 KGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS---TGK 415

Query: 240 MYKADAVFKDMVENGILPN-----------------------------------EVTFNT 264
           + KA+ +  +M+  G  PN                                    VT N 
Sbjct: 416 VLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNI 475

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAA-----------------------GVVTYNSLI 301
           +IDG CK   +  A+++ E M  HG AA                        ++TY+ +I
Sbjct: 476 VIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIII 535

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA-RVL--------- 351
           NGLC  G+LDEA     EM+   L P+ +  +  I+ FCK   +  A RVL         
Sbjct: 536 NGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCN 595

Query: 352 -------------------------FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
                                     DD+ E+G++P++ TYN +I   C+ GR++DA ++
Sbjct: 596 KSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSL 655

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN-ELVNNGMRAGLVTYNILVGALC 445
            + ML +G+ P++S++  LI    +  +   V+ +    L   G +  L  Y+++   L 
Sbjct: 656 LDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL--YSLMFNELL 713

Query: 446 KDGKSKKAVSL----LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             G+  +A  L    LD  F +           YN LI+  C+   LE+A+ +L+++++K
Sbjct: 714 IGGEVSEAKELFDAALDRCFDLGN-------FQYNDLIEKLCKDEMLENASDILHKMIDK 766

Query: 502 GLIPNQTTYQIVREEMMEKG 521
           G   +  ++  V + + ++G
Sbjct: 767 GYRFDPASFMPVIDGLGKRG 786



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 14/243 (5%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           +  + +  K GK      V K+M++R    +L ++N ++ GL    ++ +   +++DMK 
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKE 626

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G++P + TYN +I   C+ G   ++  A ++  +M++ GI PN  +F  LI  FCK  +
Sbjct: 627 KGITPNICTYNNMISCLCEGG---RIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683

Query: 275 ISAAMKVFEEMGSHGIAAGV-----VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
                +VFE      IA  +       Y+ + N L + G++ EA  L D  +        
Sbjct: 684 FGVVKEVFE------IALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGN 737

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
              N LI   CK +++E A  +   + ++G      ++  +ID   K G+  DA  +   
Sbjct: 738 FQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAER 797

Query: 390 MLD 392
           M+D
Sbjct: 798 MMD 800



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 34/257 (13%)

Query: 111 SLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
           SL  +SII D  + ++ K+ K    F   K     G   S+ + N L+  L  + +  ++
Sbjct: 558 SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI 617

Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
             +  +MK + I  N+ ++N +++ LC+ G++  A+ ++++M   G+SP + ++ +LI  
Sbjct: 618 YGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKA 677

Query: 231 YCKKGGIGKMYKA-----------DAVFKDMVENGILPNEVT------------------ 261
           +CK    G + +            +A++  M    ++  EV+                  
Sbjct: 678 FCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGN 737

Query: 262 --FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
             +N LI+  CKDE +  A  +  +M   G      ++  +I+GL   GK  +A  L + 
Sbjct: 738 FQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAER 797

Query: 320 MM---ASGLKPNVVTSN 333
           MM   + G+  N +T N
Sbjct: 798 MMDMASEGMVENKITRN 814



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 24/169 (14%)

Query: 116 SIIIDMLMLAYVKNMKP-HLGFEAFKRAGDYGLKSSVLS-----CNQ-------LLRALV 162
           S++ +ML      N+    L  +AF +A D+G+   V       C         +   L+
Sbjct: 654 SLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELL 713

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
             G+  + + ++     R  +L    +N ++  LCK   L  ASDI+  M   G      
Sbjct: 714 IGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPA 773

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFK--------DMVENGILPNEVTFN 263
           ++  +IDG  K+G   K + AD + +         MVEN I  NE  FN
Sbjct: 774 SFMPVIDGLGKRG---KKHDADELAERMMDMASEGMVENKITRNESAFN 819


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 200/391 (51%), Gaps = 41/391 (10%)

Query: 131 KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
           +P +  + F R   +G++ SV S N LL ALV+  +F  V  ++K  K +          
Sbjct: 136 RPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSK---------- 185

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
                                    GV P V T NILI   CKK  +     A  VF +M
Sbjct: 186 ------------------------FGVVPNVFTCNILIKALCKKNDVEG---ARKVFDEM 218

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
              GI+PN VT+ T++ G+    ++  A +VF E+  HG      TY  L++G    G+ 
Sbjct: 219 PSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRF 278

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
            +AV + DEM  +G++PN +T   +I G+CK++   +A  L +D+ E+   P+      +
Sbjct: 279 TDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKV 338

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           ID  C EGR+++A  M   +L +   PD +  + LI  L +EGN+   R + NE    G 
Sbjct: 339 IDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERGT 397

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            + L+TYN L+  +C+ G+  +A  L D+M    ++   PN  TYN+LIKGF + GK ++
Sbjct: 398 ISSLLTYNTLIAGMCEMGELCEAARLWDDML---EKGCVPNEFTYNMLIKGFLKVGKAKE 454

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
              ++ E+L+KG + N++TY I+ E +++ G
Sbjct: 455 VIKVVEEMLDKGCLLNESTYLILVEGLLKLG 485



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 6/283 (2%)

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
            +++  ++ ++GI  +E  F T+I  +        A+K F  + + G+   V + N+L+N
Sbjct: 105 VESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLN 164

Query: 303 GLCVDGKLDEA-VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
            L  + +     +  +      G+ PNV T N LI   CKK  VE AR +FD++   G+ 
Sbjct: 165 ALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIV 224

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
           P+V+TY T++  Y   G M  A  +   + D G LPD +TY  L+ G  ++G       +
Sbjct: 225 PNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKV 284

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIK 480
           M+E+  NG+    +TY +++   CK+ KS +A++LL++M     EKK+ PN      +I 
Sbjct: 285 MDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDML----EKKYIPNSALCCKVID 340

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             C +G++++A  +  +LL+K   P+      +   + ++G I
Sbjct: 341 VLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNI 383



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 168/392 (42%), Gaps = 69/392 (17%)

Query: 70  LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
           + +  V +    + + L+  V+N +F+SV  +F   S     +  N    ++L+ A  K 
Sbjct: 147 IQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFK-YSKSKFGVVPNVFTCNILIKALCKK 205

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
                  + F      G+  +V++   +L   V  G     + V+ E+       +  ++
Sbjct: 206 NDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTY 265

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-------------- 235
             +++G  K G+   A  +M++M+  GV P  +TY ++I GYCK+               
Sbjct: 266 TILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLE 325

Query: 236 ------------------GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
                             G G++ +A  +++ +++    P+    +TLI   CK+ NI  
Sbjct: 326 KKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWE 385

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
           A K+F E    G  + ++TYN+LI G+C  G+L EA  L D+M+  G  PN  T N LI 
Sbjct: 386 ARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIK 444

Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
           GF K                                    G+ ++   +   MLD+G L 
Sbjct: 445 GFLKV-----------------------------------GKAKEVIKVVEEMLDKGCLL 469

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           + STY  L+ GL + G  E + NI++ ++++G
Sbjct: 470 NESTYLILVEGLLKLGKREELLNILSMIISSG 501



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 4/199 (2%)

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N  T +A+I    + +  E    L  ++ + G++ S   + T+I +Y    R + A    
Sbjct: 85  NYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTF 144

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCK 446
             +   GV   V + N L+  L +      V  +     +  G+   + T NIL+ ALCK
Sbjct: 145 LRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCK 204

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
               + A  + DEM  M      PN+VTY  ++ G+  +G +  A  +  EL + G +P+
Sbjct: 205 KNDVEGARKVFDEMPSMGIV---PNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPD 261

Query: 507 QTTYQIVREEMMEKGFIPD 525
            TTY I+ +  +++G   D
Sbjct: 262 ATTYTILMDGYVKQGRFTD 280


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 222/447 (49%), Gaps = 11/447 (2%)

Query: 74   VVAKKYPKIRSFLHMFVKNGKFT-SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
            V+A  Y  + + L  FV++G    ++ T+   +      + R+S+    LM   +K    
Sbjct: 655  VLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSV--HSLMEGILKRDGT 712

Query: 133  HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
                E  +     GL    L  + ++R   K  +      + K+ +   + L   S+N +
Sbjct: 713  EKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNAL 772

Query: 193  LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
            + GL     ++ A ++  +MK LG  P   TY++++D   K   I  M K   + ++M  
Sbjct: 773  ICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLK---IQEEMHN 829

Query: 253  NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
             G     VT+NT+I G  K + +  A+ ++ ++ S G +    TY  L++GL  DG +++
Sbjct: 830  KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889

Query: 313  AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
            A AL DEM+  G +PN    N L+NG+      EK   LF+ + EQG++P + +Y  +ID
Sbjct: 890  AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVID 949

Query: 373  AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
              C +GR+ D  +    + D G+ PD+ TYN LI GL + G +E   ++ N++   G+  
Sbjct: 950  TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009

Query: 433  GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDA 491
             L TYN L+  L K GK+ +A  + +E+      K W PN+ TYN LI+G+   G  E+A
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLA----KGWKPNVFTYNALIRGYSVSGSPENA 1065

Query: 492  NGLLNELLEKGLIPNQTTYQIVREEMM 518
                  ++  G  PN +TY  +  +M+
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYMQLPNQML 1092



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 212/445 (47%), Gaps = 11/445 (2%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSI---IIDMLMLAYVKNMKPHLGF 136
           P +R++  + +  GK     T+   L        R ++    I + +L     ++    +
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE--AY 261

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
              ++  + G K  V++   L++ L   G+  D + V+ +MK    + +  ++  +L+  
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
             +G     S+I   +K+ G +  VV+Y   +D  C+   +G++ +A  VF +M + GI+
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ---VGRVDEALDVFDEMKQKGII 378

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P + ++N+LI GF K +  + A+++F  M  HG      T+   IN     G+  +A+  
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            + M + G+ P+VV  NA++ G  K   +  A+ +F ++   G+SP  ITY  +I    K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
               ++A  +   M++    PDV   N LI  L + G       I  EL    +     T
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YN L+  L ++GK K+ + LL+    M      PNI+TYN ++   C+ G++  A  +L 
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLE---GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLY 615

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKG 521
            +   G +P+ ++Y  V   ++++G
Sbjct: 616 SMTMNGCMPDLSSYNTVMYGLVKEG 640



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 201/413 (48%), Gaps = 8/413 (1%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+   + L+   VK+       + +K     G+  +V + + L+ A  K    E V  + 
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            EM+ R +  N+ S+   +  L +AG+L +A  I+  M+  G  P VVT  +LI   C  
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM-KVFEEMGSHGIAAG 293
              G++  A  VF  M  +   P+ VT+ TL+D  C D   S ++ +++  + + G    
Sbjct: 290 ---GRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSGDSRSVSEIWNALKADGYNDN 345

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VV+Y + ++ LC  G++DEA+ + DEM   G+ P   + N+LI+GF K     +A  LF+
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFN 405

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            ++  G +P+  T+   I+ + K G    A      M  +G++PDV   N ++ GL++ G
Sbjct: 406 HMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            +   + + +EL   G+    +TY +++    K   + +A+ +  EM    + +  P+++
Sbjct: 466 RLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI---ENRCAPDVL 522

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
             N LI    + G+  +A  +  EL E  L P   TY  +   +  +G + ++
Sbjct: 523 AMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 40/448 (8%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D L  NS+I DML     K  + +  ++ F    +  L+ +  + N LL  L +EGK ++
Sbjct: 520 DVLAMNSLI-DML----YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           V  + + M       N+ ++N VL+ LCK G++N A D++  M   G  P + +YN ++ 
Sbjct: 575 VMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMY 634

Query: 230 GYCKKGGIG-------KMYKADA--------VFKDMVENGILPNEV-------------- 260
           G  K+G +        +M K  A        +    V +G++   +              
Sbjct: 635 GLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694

Query: 261 ---TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
              + ++L++G  K +    +++  E + S G+    +  + +I   C   +   A  L 
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELV 754

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
            +    G+     + NALI G   + L++ A  LF ++   G  P   TY+ ++DA  K 
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            R+ED   ++  M ++G      TYN +I+GL +   ++   N+  +L++ G      TY
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
             L+  L KDG  + A +L DEM +   E   PN   YN+L+ G+   G  E    L   
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCE---PNCAIYNILLNGYRIAGDTEKVCELFES 931

Query: 498 LLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           ++E+G+ P+  +Y +V + +   G + D
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLND 959



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 214/492 (43%), Gaps = 108/492 (21%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V+S    + AL + G+ ++   V+ EMK++ I     S+N +++G  KA + N+A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 206 SDIM-----------------------------------EDMKSLGVSPKVVTYNILIDG 230
            ++                                    E MKS G+ P VV  N ++ G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
             K G +G    A  VF ++   GI P+ +T+  +I    K  N   AMK+F EM  +  
Sbjct: 461 LAKTGRLGM---AKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
           A  V+  NSLI+ L   G+ +EA  +  E+    L+P   T N L+ G  ++  V++   
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L + ++     P++ITYNT++D  CK G +  A  M  SM   G +PD+S+YN ++ GL 
Sbjct: 578 LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLV 637

Query: 411 REGNVE------------------GVRNIMNELVNNG-MRAGLVT--------------- 436
           +EG ++                   V  I+   V +G M+  L T               
Sbjct: 638 KEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRS 697

Query: 437 --YNILVGALCKDGKSKK-------AVS--LLDEMF----------------KMEKEKKW 469
             ++++ G L +DG  K        A S  LLD++F                  E  KK+
Sbjct: 698 SVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKF 757

Query: 470 PNI------VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            N+       +YN LI G   +  ++ A  L +E+   G  P++ TY ++ + M +   I
Sbjct: 758 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817

Query: 524 PD---IEGHMYN 532
            D   I+  M+N
Sbjct: 818 EDMLKIQEEMHN 829



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 180/397 (45%), Gaps = 43/397 (10%)

Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
           SCN +L  +   G+  DV  V+  M+R+ I+ N+ +F  V   +   G L  A   +  M
Sbjct: 103 SCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM 162

Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
           K  G+     TYN LI  +  K G  +  +A  V+K M  +G++P   T++ L+  F K 
Sbjct: 163 KEAGIVLNAYTYNGLIY-FLVKSGFDR--EAMDVYKAMAADGVVPTVRTYSVLMLAFGKR 219

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
            +    + +  EM + G+   V +Y   I  L   G+L+EA  +  +M   G KP+VVT+
Sbjct: 220 RDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279

Query: 333 NALINGFCKKKLVEKARVLF-----------------------------------DDISE 357
             LI   C    +  A+ +F                                   + +  
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKA 339

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G + +V++Y   +DA C+ GR+++A  + + M  +G++P   +YN LI+G  +      
Sbjct: 340 DGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYN 476
              + N +  +G      T+ + +    K G+S KA+    + +++ K K   P++V  N
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL----KRYELMKSKGIVPDVVAGN 455

Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            ++ G  + G+L  A  + +EL   G+ P+  TY ++
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 201/425 (47%), Gaps = 12/425 (2%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           + GK   V  +   ++  S+S   N I  + ++    KN + +   +        G    
Sbjct: 568 REGKVKEVMQLLEGMN--SNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           + S N ++  LVKEG+ ++  +++ +MK+  +  +  +   +L    ++G + +A   + 
Sbjct: 626 LSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVR 684

Query: 211 DMKSLGVSPKVVTYNI--LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
           +   L    KV   ++  L++G  K+ G  K  +     +++  +G+L +++  + +I  
Sbjct: 685 EY-ILQPDSKVDRSSVHSLMEGILKRDGTEKSIE---FAENIASSGLLLDDLFLSPIIRH 740

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
           FCK +   AA ++ ++  + G++    +YN+LI GL  +  +D A  L  EM   G  P+
Sbjct: 741 FCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
             T + +++   K   +E    + +++  +G   + +TYNT+I    K   +++A  +  
Sbjct: 801 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 860

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            ++  G  P   TY  L+ GL ++GN+E    + +E++  G       YNIL+      G
Sbjct: 861 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
            ++K   L + M +   +   P+I +Y V+I   C  G+L D      +L + GL P+  
Sbjct: 921 DTEKVCELFESMVE---QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977

Query: 509 TYQIV 513
           TY ++
Sbjct: 978 TYNLL 982



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 177/410 (43%), Gaps = 76/410 (18%)

Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
           Y+ MK + I  ++ + N VL GL K G+L  A  +  ++K++G+SP  +TY ++I    K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                +  K   +F +M+EN   P+ +  N+LID   K    + A K+F E+    +   
Sbjct: 499 ASNADEAMK---IFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPT 555

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             TYN+L+ GL  +GK+ E + L + M ++   PN++T N +++  CK   V  A  +  
Sbjct: 556 DCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLY 615

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM--------------------------- 386
            ++  G  P + +YNT++    KEGR+++AF M                           
Sbjct: 616 SMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGL 675

Query: 387 --------RNSMLDRGVLPDVSTYNCLIAG-LSREG---NVEGVRNIM------------ 422
                   R  +L      D S+ + L+ G L R+G   ++E   NI             
Sbjct: 676 MKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLS 735

Query: 423 ---------------NELV----NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
                          +ELV    N G+     +YN L+  L  +     A  L  EM ++
Sbjct: 736 PIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 795

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             +   P+  TY++++    +  ++ED   +  E+  KG      TY  +
Sbjct: 796 GCD---PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI 842


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 192/379 (50%), Gaps = 6/379 (1%)

Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
           P LGF  F  A ++    +  SC+ +   L+ +   E      + +K   I+++ D+F  
Sbjct: 72  PQLGFRFFIWASNFKRFRAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFV 131

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++    K G  +KA +    M+    +P V TYN+++D   +K     +  A  V+  M+
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNF---LLLALTVYTRMM 188

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
           +   LPN  TF+ LIDG CK  N+  A+ +F+EM   GI     TY  +I+GLC   ++D
Sbjct: 189 KLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVD 248

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           +A  L D+M  SG+ P+ VT NAL+NGFC    V++A  L     + G    V  Y+ LI
Sbjct: 249 DAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLI 308

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
               +  R ED   +   M++  V PDV  Y  ++ GL+  G V     ++NE+  +G+ 
Sbjct: 309 RGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVV 368

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              V YN+L+   C  G   +A SL     ++ +   +PN+ TY++LI G C+ G   DA
Sbjct: 369 PDTVCYNVLIKGFCDMGLLSEARSL---QLEISRHDCFPNVKTYSILISGMCRNGLTRDA 425

Query: 492 NGLLNELLEKGLIPNQTTY 510
             + NE+ + G  P+  T+
Sbjct: 426 QEIFNEMEKLGCYPSAVTF 444



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 221/526 (42%), Gaps = 71/526 (13%)

Query: 32  VILQLFNSDADPVLILRYFCWST--KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
           ++  +  +  +P L  R+F W++  K  RA  S  L   LL +    + Y +    L   
Sbjct: 61  IVTSIIQNPPNPQLGFRFFIWASNFKRFRAWESCDLITDLLINQNGLELYCQTLEAL--- 117

Query: 90  VKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS 149
            KNG     +  F                  +L+  Y+K        E F    D+    
Sbjct: 118 -KNGGIKVHNDAFF-----------------VLIKVYLKMGLTDKAMETFGSMRDFDCTP 159

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
            V + N +L  L+++        VY  M +     N+ +F+ +++GLCK+G +  A  + 
Sbjct: 160 DVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLF 219

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M   G+ P   TY ++I G C+   +   Y+   +F  M ++G+ P+ VT N L++GF
Sbjct: 220 DEMTQRGILPDAFTYCVVISGLCRSKRVDDAYR---LFDKMKDSGVGPDFVTCNALLNGF 276

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C  + +  A  +       G    V  Y+ LI GL    + ++   L  +M+   +KP+V
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
                ++ G  +   V  A  L ++++E G+ P  + YN LI  +C  G + +A +++  
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           +      P+V TY+ LI+G+ R G     + I NE+   G     VT+N L+  LCK G+
Sbjct: 397 ISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQ 456

Query: 450 SKKAVSLLDEM---------------------------------------------FKME 464
            +KA  L  +M                                              ++ 
Sbjct: 457 LEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLA 516

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
                P I TYN+L+ GFC+ G    A  L  E+  KGL P+  TY
Sbjct: 517 DSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTY 562



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 169/341 (49%), Gaps = 6/341 (1%)

Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           +S + + + L     L      +E +K+ G+      + +LI  Y K   +G   KA   
Sbjct: 92  ESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLK---MGLTDKAMET 148

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           F  M +    P+  T+N ++D   +   +  A+ V+  M        V T++ LI+GLC 
Sbjct: 149 FGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCK 208

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G + +A+ L DEM   G+ P+  T   +I+G C+ K V+ A  LFD + + G+ P  +T
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVT 268

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
            N L++ +C   R+++AF++       G + DV  Y+CLI GL R    E V+ +  +++
Sbjct: 269 CNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMI 328

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            + ++  +  Y I++  L + GK + A+ LL+EM    +    P+ V YNVLIKGFC  G
Sbjct: 329 EDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM---TESGVVPDTVCYNVLIKGFCDMG 385

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
            L +A  L  E+      PN  TY I+   M   G   D +
Sbjct: 386 LLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 183/401 (45%), Gaps = 58/401 (14%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F++ G Y L     SC  L+R L +  ++EDV+ +Y++M    ++ ++  +  ++ GL +
Sbjct: 292 FEKDG-YVLDVRGYSC--LIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAE 348

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
           AGK+  A +++ +M   GV P  V YN+LI G+C    +G + +A ++  ++  +   PN
Sbjct: 349 AGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCD---MGLLSEARSLQLEISRHDCFPN 405

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA----- 313
             T++ LI G C++     A ++F EM   G     VT+NSLI+GLC  G+L++A     
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY 465

Query: 314 ---------VALR------------------DEMMASGL----------------KPNVV 330
                    + LR                  +++  SGL                 P + 
Sbjct: 466 KMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIY 525

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T N L+NGFCK      A  LF ++  +GLSP  +TY TLI+   +  R EDA+ + + M
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQM 585

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
              G  PD + Y  ++  + R   +    ++  + + N           + G   K    
Sbjct: 586 EKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVE 645

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           K    LL+  FK+      P    Y + + G CQ  ++ +A
Sbjct: 646 KAVRGLLEMDFKLNDFDLGP----YAIWLIGLCQTRRVGEA 682



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 3/281 (1%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           GI  +   F  LI  + K      AM+ F  M        V TYN +++ L     L  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           + +   MM     PNV T + LI+G CK   V+ A  LFD+++++G+ P   TY  +I  
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            C+  R++DA+ + + M D GV PD  T N L+ G      V+   +++     +G    
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +  Y+ L+  L +  K  + V LL    KM ++   P++  Y +++KG  + GK+ DA  
Sbjct: 301 VRGYSCLIRGLFR-AKRYEDVQLLYR--KMIEDNVKPDVYLYTIMMKGLAEAGKVRDALE 357

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           LLNE+ E G++P+   Y ++ +   + G + +       IS
Sbjct: 358 LLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 57/170 (33%)

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
            +  LI  Y K G  + A     SM D    PDV TYN ++  L ++             
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK------------- 174

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
             N +   L  Y                        +M K    PN+ T+++LI G C+ 
Sbjct: 175 --NFLLLALTVYT-----------------------RMMKLNCLPNVATFSILIDGLCKS 209

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           G ++DA  L                    +EM ++G +PD   +   ISG
Sbjct: 210 GNVKDALHLF-------------------DEMTQRGILPDAFTYCVVISG 240


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 201/391 (51%), Gaps = 24/391 (6%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           LL  L K  +  + E +  EM  + +  N+ ++N ++ GLC+ G+ +  + ++E M+   
Sbjct: 202 LLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR 261

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            SP   TY  ++ G CK G +G   K   V  + +  G+    +T+N LI+G+CK  ++ 
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAK---VLHEAIGKGVALEVLTYNALINGYCKGGDMK 318

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           AA+ V + M  + +  GV T+N +I+G C  GK+ +A+A   +M  +GL PN VT N+LI
Sbjct: 319 AALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLI 378

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G C     + A  L D + E G+ P   TY   IDA C EG++E+A ++ + +  +G+ 
Sbjct: 379 SGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIK 438

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
                Y  L+ G  + G+++    +M ++ +      + TYN L+  LCK  +  +A+ L
Sbjct: 439 AHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDL 498

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI---- 512
           LD   KM+K+   P   T+N+LIK      K  DA  +  +++  G  P++ TY +    
Sbjct: 499 LD---KMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKIST 555

Query: 513 ------VRE--------EMMEKGFIPDIEGH 529
                  +E        EM E G  PD+E +
Sbjct: 556 DWFEGATKEENIDMAVVEMHEAGVFPDVETY 586



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 200/409 (48%), Gaps = 37/409 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V++ N L+  L +EG+F+DV  + ++M+ +R   +  ++  V++GLCK GK+   
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
           + ++ +    GV+ +V+TYN LI+GYCK    G M  A  V + M  N + P   TFN +
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKG---GDMKAALDVLQLMKRNRVNPGVQTFNEV 342

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I GFC    +  AM    +M   G++   VT+NSLI+G C  G+   A+ L D M   G+
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+  T    I+  C +  +E+A  LF  +  +G+    + Y +L+  YC+ G ++ AF 
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M     +PDV TYN LI GL +   ++   ++++++   G+     T+NIL+  + 
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522

Query: 446 KDGKSKKAVSLLDEMF----------------------------------KMEKEKKWPN 471
            D K   A  + ++M                                   +M +   +P+
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPD 582

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           + TYN +IK +   G  E A     ++L   + P+ TTY I+   M  K
Sbjct: 583 VETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNK 631



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 195/404 (48%), Gaps = 19/404 (4%)

Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K+ K   G +    A   G+   VL+ N L+    K G  +    V + MKR R+   + 
Sbjct: 278 KHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQ 337

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +FN V++G C  GK++KA   +  M   G+SP  VT+N LI G C    +G+   A  + 
Sbjct: 338 TFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCS---VGERKIALRLL 394

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
             M E G+LP+  T+   ID  C +  +  A  +F  +   GI A  V Y SL++G C  
Sbjct: 395 DLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQV 454

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +D A  L ++M +    P+V T N LI+G CK K +++A  L D + +QG+ P+  T+
Sbjct: 455 GDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTF 514

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA-----GLSREGNVEGVRNIM 422
           N LI     + +  DA  M   M+  G  PD  TY   I+     G ++E N++     M
Sbjct: 515 NILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEM 574

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
           +E    G+   + TYN ++ A    G  +KA     +M  +  +   P+  TY++L+   
Sbjct: 575 HE---AGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPID---PDCTTYSILLNYM 628

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           C K   +D++   NE + K  + +    Q + E+M E    P I
Sbjct: 629 CNK---DDSDAFDNEKIWK--MVDVRNLQELFEQMCESDAAPGI 667



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 181/376 (48%), Gaps = 29/376 (7%)

Query: 177 MKRRRIELNLDSF--NFVLNGLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCK 233
           ++ R   L  D+F  N ++ GLC+AG L  A  +   M +  G      +Y ILI G C 
Sbjct: 114 VRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCA 173

Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
            G I     A  VF  M      P   T+  L+DG CK   +  A  +  EM + G+   
Sbjct: 174 AGRIDD---ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPN 230

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLF 352
           VVTYN+LI GLC +G+ D+   L ++M      P+  T   +++G CK  K+   A+VL 
Sbjct: 231 VVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLH 290

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
           + I  +G++  V+TYN LI+ YCK G M+ A  +   M    V P V T+N +I G    
Sbjct: 291 EAIG-KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
           G V      + ++   G+    VT+N L+   C  G+ K A+ LLD    ME+    P+ 
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD---LMEEYGVLPDR 406

Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY--------QI--------VREE 516
            TY + I   C +G+LE+A+ L + L  KG+  +   Y        Q+        + E+
Sbjct: 407 QTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEK 466

Query: 517 MMEKGFIPDIEGHMYN 532
           M  +  +PD+  H YN
Sbjct: 467 MASENCMPDV--HTYN 480



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 7/338 (2%)

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N  ++N ++N  CK   L  A   +  M+  G++P   TYN L+ G C+ G +     A 
Sbjct: 89  NRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLA---AAC 145

Query: 245 AVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
            +F  M    G   +  ++  LI G C    I  A +VF +M       GV TY  L++G
Sbjct: 146 GLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDG 205

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC   ++ EA AL  EM+  G+ PNVVT NALI G C++   +    L + +  Q  SP 
Sbjct: 206 LCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPD 265

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
             TY  ++   CK G++     + +  + +GV  +V TYN LI G  + G+++   +++ 
Sbjct: 266 CWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQ 325

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            +  N +  G+ T+N ++   C  GK  KA++ L +M         PN VT+N LI G C
Sbjct: 326 LMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLS---PNTVTFNSLISGQC 382

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             G+ + A  LL+ + E G++P++ TY I  + + ++G
Sbjct: 383 SVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEG 420



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 151/296 (51%), Gaps = 7/296 (2%)

Query: 216 GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENI 275
           G  P   TYN LI+ +CK   +     A      M E G+ P+  T+N L+ G C+   +
Sbjct: 85  GAPPNRCTYNTLINAHCKLALLADARAALV---RMREAGLAPDTFTYNCLMLGLCRAGLL 141

Query: 276 SAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +AA  +F +M    G      +Y  LI GLC  G++D+A  +  +M     +P V T   
Sbjct: 142 AAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTV 201

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G CK + V +A  L  ++  +G+ P+V+TYN LI   C+EGR +D   +   M  + 
Sbjct: 202 LLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR 261

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
             PD  TY  ++ GL + G V     +++E +  G+   ++TYN L+   CK G  K A 
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA- 320

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             LD +  M++ +  P + T+N +I GFC  GK+  A   L ++   GL PN  T+
Sbjct: 321 --LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTF 374



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 4/214 (1%)

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
           +L   +A    M+ SG  PN  T N LIN  CK  L+  AR     + E GL+P   TYN
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
            L+   C+ G +  A  +   M  R G   D  +Y  LI GL   G ++    +  ++  
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
              R G+ TY +L+  LCK  +  +A +LL EM     +   PN+VTYN LI G CQ+G+
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV---NKGVVPNVVTYNALIGGLCQEGR 246

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            +D   LL ++  +   P+  TY  V   + + G
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHG 280



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/493 (20%), Positives = 186/493 (37%), Gaps = 103/493 (20%)

Query: 80  PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
           P +++F   +H F   GK          ++     L  N++  + L+       +  +  
Sbjct: 334 PGVQTFNEVIHGFCCGGKVHKAMAFLTQMA--GAGLSPNTVTFNSLISGQCSVGERKIAL 391

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
                  +YG+     +    + AL  EG+ E+   ++  +  + I+ +   +  +++G 
Sbjct: 392 RLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGY 451

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ G ++ A  +ME M S    P V TYN LIDG CK   + ++ +A  +   M + GI 
Sbjct: 452 CQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCK---VKRLDRAIDLLDKMKKQGIE 508

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN-----GLCVDGKLD 311
           P   TFN LI     D+  + A K++E+M S G      TY   I+     G   +  +D
Sbjct: 509 PTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENID 568

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA----------------------- 348
            AV    EM  +G+ P+V T NA+I  +    L EKA                       
Sbjct: 569 MAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625

Query: 349 --------------------------RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
                                     + LF+ + E   +P + TY  L+   C + R+E+
Sbjct: 626 NYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEE 685

Query: 383 -----------------------------------AFAMRNSMLDRGVLPDVSTYNCLIA 407
                                              A     SM  +   P + +   L++
Sbjct: 686 VEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLS 745

Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
           GL   G+     +I ++++  G     V + +L+  L + G +   + +L     M+ +K
Sbjct: 746 GLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLS---VMDAKK 802

Query: 468 KWPNIVTYNVLIK 480
              +  TY  L++
Sbjct: 803 CVASTRTYASLVR 815



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + + G  P+  TYNTLI+A+CK   + DA A    M + G+ PD  TYNCL+ GL R
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 412 EGNVEGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW- 469
            G +     +  ++    G      +Y IL+  LC  G+   A  +  +M      + W 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM-----SRGWC 192

Query: 470 -PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            P + TY VL+ G C+  ++ +A  LL E++ KG++PN  TY  +   + ++G   D+
Sbjct: 193 RPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDV 250


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 203/395 (51%), Gaps = 8/395 (2%)

Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
           +DML+     + +    +E  + A + G   SV   N L+ A  KEG  E+   +Y+ M 
Sbjct: 394 MDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMN 453

Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
           +  +  +  +FN+++ GLC  G+L++A  ++E M S G      ++ I +D   ++G   
Sbjct: 454 KLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDASFREGNAV 512

Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
              K    + DM + G+ P+ + F+  I+G C+ + ++ A + F EM + GI     TYN
Sbjct: 513 CALK---CWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYN 569

Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
           S+I+ LC  G + EA+ L+  M  +GL P++ TSN LI+G C++  +E    L  D+   
Sbjct: 570 SIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSN 629

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
           GL+P  +TYNT+I+AYC+   M  A    N ML  G  PD+ TYN  +  L     +   
Sbjct: 630 GLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQA 689

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             +++ELV  G     VTYN L+  +C D    +A+ L   + KM  +   PN +T NV 
Sbjct: 690 GKVLDELVAMGCPPDSVTYNTLMDGICSD-VLDRAMILTGRLIKMAFQ---PNTITLNVF 745

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           +  FC++G  + A     +L E   + +  T  I+
Sbjct: 746 LSHFCKQGFGKRALMWAEKLREDSFVFDDATRNII 780



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 207/442 (46%), Gaps = 66/442 (14%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F+ F+     G + +V++ N L+  L  EG+  +   ++ EM +  I+ N  +FN +++
Sbjct: 273 AFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLID 332

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF------- 247
           G  K G++++A     +MK+ G+ P   T+NI+  G  K G   ++     +F       
Sbjct: 333 GYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLAD 392

Query: 248 ----------------------KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
                                 +  +E G   +   FN LI  + K+     A +++  M
Sbjct: 393 GMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIM 452

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--------------------- 324
              G+A    T+N LI GLC  G+LDEA  L + M++ G                     
Sbjct: 453 NKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAV 512

Query: 325 -------------LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
                        L+P+ +  +A ING C+   V +A   F +++ +G+ P+  TYN++I
Sbjct: 513 CALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSII 572

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
            A C+ G M +A  ++ +M   G++PD+ T N LI GL REG +E V N++ ++ +NG+ 
Sbjct: 573 SALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLT 632

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
              VTYN ++ A C+      A++ +++M     E   P+I TYN+ +   C    L  A
Sbjct: 633 PDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCE---PDIFTYNIWMHSLCSNHMLNQA 689

Query: 492 NGLLNELLEKGLIPNQTTYQIV 513
             +L+EL+  G  P+  TY  +
Sbjct: 690 GKVLDELVAMGCPPDSVTYNTL 711



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 191/412 (46%), Gaps = 55/412 (13%)

Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
           + G+      V++EM  R    +L +FN ++ G C  G +  AS ++  M   G+ P V 
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255

Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
           +YNILI G+C  G     +K   +F++M  +G  P  VT+N L+D  C +  +  A ++F
Sbjct: 256 SYNILIKGHCVFGWSRDAFK---LFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLF 312

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING---- 338
           +EM   GI A  +T+N LI+G    G++D+A A   EM A GL P+  T N +  G    
Sbjct: 313 DEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKF 372

Query: 339 ----------------------------FCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
                                        C    ++ A  L     EQG   SV  +N L
Sbjct: 373 GHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNAL 432

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
           I AY KEG  E+AF +   M   G+ P  ST+N LI GL  +G ++  + ++  +V+ G 
Sbjct: 433 IAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY 492

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
                ++ I + A  ++G +  A+   D+M K+  +   P+ + ++  I G C+   + +
Sbjct: 493 CLS-TSFTICLDASFREGNAVCALKCWDDMGKLGLQ---PDFIAFSAYINGLCRLDYVNE 548

Query: 491 ANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
           A     E+  +G++PN  TY  +                ++ M + G +PDI
Sbjct: 549 AYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDI 600



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 43/405 (10%)

Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
           G++G+  +V S N L++     G   D   +++EM R   E  + ++N +++ LC  G++
Sbjct: 246 GEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRM 305

Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
            +A  + ++M  +G+    +T+N+LIDGY K    G+M +A A +++M   G++P+  TF
Sbjct: 306 PEARRLFDEMAQVGIQANTITFNVLIDGYAKT---GRMDQACAAYREMKARGLVPDSCTF 362

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N +  G  K  + +  +   +  GSH +A G+   + L+  LC D +LD+A  L    + 
Sbjct: 363 NIIAAGAYKFGHAAQLVHDHDMFGSHMLADGM---DMLVCRLCWDCRLDDAWELLRGAIE 419

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G   +V   NALI  + K+ L E+A  L+  +++ GL+PS  T+N LI   C +GR+++
Sbjct: 420 QGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDE 479

Query: 383 AFAMRNSMLDR----------------------------------GVLPDVSTYNCLIAG 408
           A  +   M+ +                                  G+ PD   ++  I G
Sbjct: 480 AQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYING 539

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
           L R   V        E+   G+     TYN ++ ALC+ G   +A+ L      M +   
Sbjct: 540 LCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQ---NMRQNGL 596

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            P+I T N+LI G C++GKLE  + LL ++   GL P+  TY  +
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTI 641



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 39/366 (10%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           +    L+    AG   +A D++  ++  G +P +     L+    + G   +++ A  VF
Sbjct: 151 ALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSG---EVHAAWNVF 207

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           ++M   G  P+  TFN +I GFC    +  A  +   MG  GI   V +YN LI G CV 
Sbjct: 208 EEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVF 267

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G   +A  L +EM  SG +P VVT N L++  C +  + +AR LFD++++ G+  + IT+
Sbjct: 268 GWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITF 327

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN------------- 414
           N LID Y K GRM+ A A    M  RG++PD  T+N + AG  + G+             
Sbjct: 328 NVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGS 387

Query: 415 -------------------VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
                              ++    ++   +  G    +  +N L+ A  K+G  ++A  
Sbjct: 388 HMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFE 447

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
           L   M K+      P+  T+N LI G C +G+L++A  LL  ++ KG   + T++ I  +
Sbjct: 448 LYRIMNKLGLA---PSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLD 503

Query: 516 EMMEKG 521
               +G
Sbjct: 504 ASFREG 509


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 6/377 (1%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D G +S   +   ++  L K G         K+M+ +   L++ +++ V++GLCK G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D+   M   G+ P + TYN LI G C      +  +A  +  +M+  GI+P+  TFN
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCN---FDRWKEAAPLLANMMRKGIMPDVQTFN 240

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +   F K   IS A  +F  MG  GI   VVTYNS+I   C+  ++ +A+ + D M+  
Sbjct: 241 VIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRK 300

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN+VT N+LI+G+C+ K + KA     ++   GL P V+T++TLI  +CK G+   A
Sbjct: 301 GCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAA 360

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M   G LPD+ T   ++ GL +        ++  EL        ++ Y+I++  
Sbjct: 361 KELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNG 420

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           +C  GK   A+ L   +     +    ++VTYN++I G C++G L+DA  LL ++ E G 
Sbjct: 421 MCSSGKLNDALELFSYL---SSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 477

Query: 504 IPNQTTYQIVREEMMEK 520
            P++ TY +  + ++ +
Sbjct: 478 PPDECTYNVFVQGLLRR 494



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 210/439 (47%), Gaps = 36/439 (8%)

Query: 122 LMLAYVKNMKPHL-GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           L+   V  MK +       K     G+K +V + N ++  L +         V   M + 
Sbjct: 31  LLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKI 90

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKM 240
            +E ++ +F  ++NGLC  G + +A   ++ +K +G      T   +I+G CK   +G  
Sbjct: 91  GVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK---VGHS 147

Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
             A +  K M E     +   ++ ++DG CKD  +  A+ +F +M   GI   + TYN L
Sbjct: 148 SAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCL 207

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           I+GLC   +  EA  L   MM  G+ P+V T N +   F K  ++ +A+ +F  +   G+
Sbjct: 208 IHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGI 267

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
             +V+TYN++I A+C   +M+DA  + + M+ +G LP++ TYN LI G     N+     
Sbjct: 268 EHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMY 327

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL-------------------LDEMF 461
            + E+VNNG+   +VT++ L+G  CK GK   A  L                   LD +F
Sbjct: 328 FLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLF 387

Query: 462 K-------------MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K             +EK     +I+ Y++++ G C  GKL DA  L + L  KG+  +  
Sbjct: 388 KCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVV 447

Query: 509 TYQIVREEMMEKGFIPDIE 527
           TY I+   + ++G + D E
Sbjct: 448 TYNIMINGLCKEGLLDDAE 466



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 171/323 (52%), Gaps = 6/323 (1%)

Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
           FN +   + K      A  +++ M  +GV P V T+NI+I+  C+   +       +V  
Sbjct: 29  FNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCR---LNHTVFGFSVLG 85

Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
            M + G+ P+ VTF T+++G C + N++ A++  + +   G  +   T  ++INGLC  G
Sbjct: 86  LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 145

Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
               A++   +M       +V   +A+++G CK  +V +A  LF  ++ +G+ P++ TYN
Sbjct: 146 HSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYN 205

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
            LI   C   R ++A  +  +M+ +G++PDV T+N +     + G +   ++I + + + 
Sbjct: 206 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHM 265

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+   +VTYN ++GA C   + K A+ + D M    ++   PNIVTYN LI G+C+   +
Sbjct: 266 GIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMI---RKGCLPNIVTYNSLIHGWCETKNM 322

Query: 489 EDANGLLNELLEKGLIPNQTTYQ 511
             A   L E++  GL P+  T+ 
Sbjct: 323 NKAMYFLGEMVNNGLDPDVVTWS 345



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 20/379 (5%)

Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
           A S   D LC++ ++ + L              + F +    G++ ++ + N L+  L  
Sbjct: 168 AYSAVVDGLCKDGMVFEAL--------------DLFSQMTGKGIQPNLFTYNCLIHGLCN 213

Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
             ++++   +   M R+ I  ++ +FN +     K G +++A  I   M  +G+   VVT
Sbjct: 214 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVT 273

Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
           YN +I  +C    + +M  A  VF  M+  G LPN VT+N+LI G+C+ +N++ AM    
Sbjct: 274 YNSIIGAHCM---LNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLG 330

Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
           EM ++G+   VVT+++LI G C  GK   A  L   M   G  P++ T   +++G  K  
Sbjct: 331 EMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCH 390

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
              +A  LF ++ +      +I Y+ +++  C  G++ DA  + + +  +GV  DV TYN
Sbjct: 391 FHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYN 450

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
            +I GL +EG ++   +++ ++  NG      TYN+ V  L +  +  K+   L  MF M
Sbjct: 451 IMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYL--MF-M 507

Query: 464 EKEKKWPNIVTYNVLIKGF 482
           + +    N  T  +LI  F
Sbjct: 508 KGKGFRANATTTKLLINYF 526



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 19/234 (8%)

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           +D A+    +M+     P V   N L     K K    A  L   +S  G+ P+V T+N 
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           +I+  C+       F++   M   GV P + T+  ++ GL  EGNV      ++ L + G
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
             +   T   ++  LCK G S  A+S L    KME++    ++  Y+ ++ G C+ G + 
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLK---KMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 490 DANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDIE 527
           +A  L +++  KG+ PN  TY  +                   MM KG +PD++
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 237



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL   V++ + L+    K GK    + ++  M +     +L +   +L+GL K    ++A
Sbjct: 336 GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEA 395

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +++ +     ++ Y+I+++G C  G   K+  A  +F  +   G+  + VT+N +
Sbjct: 396 MSLFRELEKMNSDLDIIIYSIILNGMCSSG---KLNDALELFSYLSSKGVKIDVVTYNIM 452

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+G CK+  +  A  +  +M  +G      TYN  + GL    ++ ++      M   G 
Sbjct: 453 INGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGF 512

Query: 326 KPNVVTSNALINGFCKKK 343
           + N  T+  LIN F   K
Sbjct: 513 RANATTTKLLINYFSANK 530


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 198/373 (53%), Gaps = 8/373 (2%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           ++GD  L   V +C  L+    K G   +   V+ EM    +  N  ++  +++G    G
Sbjct: 30  KSGDAAL--DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHG 87

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +  K   + E+M+  GV P + TYN LI  +C+    G+  +A ++F +M   GI+ N V
Sbjct: 88  QREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR---TGEFERARSLFDEMPVRGIVRNVV 144

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++NTLI G C+   +  A K+ + M + G    ++T+N L++G    GK+  A+   ++M
Sbjct: 145 SYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM 204

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            A+G +P+ VT N LI GFC+ + + +A     D+ E+GL P+ +TY  LID++ +E  M
Sbjct: 205 KAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHM 264

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
             AF +   M   G+  D  TY  L+  L  EGN++  R +   +   G+    V Y+++
Sbjct: 265 GKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMM 324

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    ++G S KA+ L+ E   M ++   PN  +Y + I+  C+  K ++A  LL++++ 
Sbjct: 325 IYGYGREGSSYKALKLIME---MRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVR 381

Query: 501 KGLIPNQTTYQIV 513
            GL  +++  Q +
Sbjct: 382 AGLQTSESICQAL 394



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 168/347 (48%), Gaps = 23/347 (6%)

Query: 196 LCKAGKLNKA-SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
           LC AG +  A + +    KS   +  V     L++G CK G + +   A  VF +M   G
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAE---ARRVFDEMPLLG 68

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + PNEVT+  L+ G+           +FEEM   G+   + TYN LI   C  G+ + A 
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L DEM   G+  NVV+ N LI G C+   +  A  L D +  +G  PS+IT+N L+D Y
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
            K G+M +A    N M   G  P   TYN LIAG  R  ++      ++++   G+    
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY IL+ +  ++    KA  +L     MEK     +  TY VL++  C +G ++DA  L
Sbjct: 249 VTYTILIDSFARENHMGKAFEILA---GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKL 305

Query: 495 LNELLEKGLIPNQTTYQIV-----RE-----------EMMEKGFIPD 525
              + EKG+ P+   Y ++     RE           EM +KG IP+
Sbjct: 306 FQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPN 352



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 175/340 (51%), Gaps = 8/340 (2%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    LM  Y  + +   GF  F+     G++ ++ + N L+    + G+FE   
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            ++ EM  R I  N+ S+N ++ GLC+ GKL  A+ +++ M++ G  P ++T+N+L+DGY
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
              G  GKM  A   F  M   G  P+ VT+N LI GFC+  +++ A +   +M   G+ 
Sbjct: 189 ---GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLE 245

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
              VTY  LI+    +  + +A  +   M  +GL+ +  T   L+   C +  ++ AR L
Sbjct: 246 PTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKL 305

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
           F  + E+G+ PS + Y+ +I  Y +EG    A  +   M  +G++P+ ++Y   I  L +
Sbjct: 306 FQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCK 365

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           +   +    +++++V    RAGL T   +  AL  D K++
Sbjct: 366 DDKCQEAEALLDDMV----RAGLQTSESICQALL-DAKAR 400


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 201/412 (48%), Gaps = 43/412 (10%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K + LS   L++AL + GK +       EM R ++  ++ ++N V++ LCKA ++++A +
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             E M      P VVTYN L+ G CK G + +   A ++F  M   GI P++VT+ TLID
Sbjct: 67  FFETMPE----PDVVTYNTLLGGLCKNGRVAQ---ACSLFGSMEGAGITPSDVTYTTLID 119

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
            FCK      A  + + M S   +  V +Y S+INGLC + K+D+A  L +EM  +G KP
Sbjct: 120 VFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKP 179

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           + VT N LI+G C K+ + +A+ L   + E    P  IT+  LI+  C   R+++AF + 
Sbjct: 180 DRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLF 239

Query: 388 NSMLDRGVLPDVSTYNCLIAG---------------------------------LSREGN 414
             M  +G  PD+ T+  L++                                  L R   
Sbjct: 240 QGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRG 299

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
            +    ++ ++   G+   +VTY      L   G  K+ +    E  +M ++   P++V 
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
           YNVL+ GFC+  +L+ A  ++  + + GL PN  TY  +      KG +  I
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 408



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 36/346 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  S ++   L+    K  +FE    + + M  R+    + S+  ++NGLCK  K+++A
Sbjct: 106 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 165

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             + E+MK  G  P  VTYN LI G C K    ++++A  +   MVEN   P+++TF  L
Sbjct: 166 YQLFEEMKLAGCKPDRVTYNTLIHGLCVKQ---RLHEAKDLLTVMVENSFQPDKITFTAL 222

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL--------------- 310
           I+G C  + I  A  +F+ M   G A  +VT+  L++ LC+  KL               
Sbjct: 223 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPE 282

Query: 311 ------------------DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
                             D A  L  +M   G+ PNVVT  A   G    K   +A   F
Sbjct: 283 AVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREF 342

Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
             + EQG+ P ++ YN L+D +CK  R++ A  M   M   G+ P++ TYN L+    R+
Sbjct: 343 RRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRK 402

Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
           G VE +  +++ +V+ G +  + T++ LV  L + G+   A S L+
Sbjct: 403 GKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 176/382 (46%), Gaps = 44/382 (11%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + L    KNG+     ++F ++      +  + +    L+  + K  +    +   +   
Sbjct: 81  TLLGGLCKNGRVAQACSLFGSME--GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMA 138

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
                 +V S   ++  L K  K +    +++EMK    + +  ++N +++GLC   +L+
Sbjct: 139 SRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLH 198

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A D++  M      P  +T+  LI+G C    I + +    +F+ M + G  P+ VT  
Sbjct: 199 EAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF---VLFQGMAKQGCAPDLVTHT 255

Query: 264 TLIDGFCKDENISAAMKV---------------------------------FEEMGSHGI 290
            L+   C    +  A+ V                                  ++M   G+
Sbjct: 256 VLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 315

Query: 291 AAGVVTYNSLINGLCVDGKLDEAV-ALRD--EMMASGLKPNVVTSNALINGFCKKKLVEK 347
           A  VVTY +   GL   G   E + A R+   M+  G++P++V  N L++GFCK   ++ 
Sbjct: 316 APNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDM 372

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +   + + GL P+++TYNTL+  +C++G++E    + ++M+ RG  PDV+T++ L+A
Sbjct: 373 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 432

Query: 408 GLSREGNVEGVRNIMNELVNNG 429
           GL R G V+   + +N  ++ G
Sbjct: 433 GLFRVGQVDAAYSFLNLAMSQG 454



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           I  Q   P+ ++Y  L+ A C+ G+++ A +    M    ++PDV TYN +I  L +   
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
           +   R I  E         +VTYN L+G LCK+G+  +A SL      ME     P+ VT
Sbjct: 61  IS--RAI--EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGS---MEGAGITPSDVT 113

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           Y  LI  FC+  + E A GLL  +  +   P   +Y
Sbjct: 114 YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSY 149


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 198/400 (49%), Gaps = 6/400 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+L   ++ +PH     F +    GL     +C  LL AL +         V+ EM R  
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           + ++   +N +L+   KAG   +A  ++  M + GV     +YN +I  YCKK   G  Y
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKK---GMRY 236

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
           +A  V   M + GI  + VT+N+LI G CK   +  A ++F EM +       VTY +LI
Sbjct: 237 EAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLI 296

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +G C  G ++EAV LR EM A+G+ P V T NA++   C+   +++   L +++ E+ + 
Sbjct: 297 DGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQ 356

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
              +T NTLI+AYCK G M  A  ++  M++ G+  +  TY  LI G  +   ++  +  
Sbjct: 357 ADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEA 416

Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
             ++V+ G       ++ LV   CK   +   + + DE+ K       P+   Y  LI+ 
Sbjct: 417 FFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLP---PDKAVYRSLIRR 473

Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            C+KG ++ A  + +++  KGL+ +   Y  +    + +G
Sbjct: 474 LCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEG 513



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  L +  +  D   V+ +M+ R +  +  +   +L  L +A     A  + ++M   G
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           ++     YN ++   C K G     +A+A+   M   G+  +  ++NT+I  +CK     
Sbjct: 180 LAVSTHVYNAMLH-VCLKAGDAA--RAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRY 236

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            AM V + M   GI A  VT+NSLI+GLC  G++ EA  L  EM A+   P+ VT   LI
Sbjct: 237 EAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLI 296

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G+C+   +E+A  L  ++   G+ P V TYN ++   C++G+M++   + N M +R V 
Sbjct: 297 DGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQ 356

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
            D  T N LI    + G++     +  +++ +G++    TY  L+   CK   +K+    
Sbjct: 357 ADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCK---AKELDEA 413

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
            +  F+M      PN   ++ L+ GFC+K   +    + +EL+++GL P++  Y+ +   
Sbjct: 414 KEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRR 473

Query: 517 MMEKGFI 523
           +  KG +
Sbjct: 474 LCRKGLV 480



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%), Gaps = 22/346 (6%)

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           L ++ + + A  + + M++ G++P       L+    +         A  VF +M   G+
Sbjct: 124 LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTAT---ARRVFDEMARAGL 180

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
             +   +N ++    K  + + A  +   M + G+     +YN++I   C  G   EA+ 
Sbjct: 181 AVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMC 240

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +RD M   G++ + VT N+LI+G CK   V++A  LF +++    +P  +TY TLID YC
Sbjct: 241 VRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYC 300

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G +E+A  +R  M   G+LP V+TYN ++  L  +G ++ V  ++NE+    ++A  V
Sbjct: 301 RAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHV 360

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T N L+ A CK G    A  +  +M  ME   +  N  TY  LI GFC+  +L++A    
Sbjct: 361 TCNTLINAYCKRGHMTSACKVKKKM--MESGLQL-NQFTYKALIHGFCKAKELDEAKEAF 417

Query: 496 NELLEKGLIPNQTTYQ----------------IVREEMMEKGFIPD 525
            ++++ G  PN + +                 ++ +E+M++G  PD
Sbjct: 418 FQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPD 463



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 155/295 (52%), Gaps = 3/295 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+++  ++ N L+  L K G+ ++   ++ EM   +   +  ++  +++G C+AG + +A
Sbjct: 249 GIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEA 308

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             +  +M++ G+ P V TYN ++   C+ G   KM + + +  +M E  +  + VT NTL
Sbjct: 309 VKLRGEMEATGMLPGVATYNAILRKLCEDG---KMKEVNQLLNEMDERKVQADHVTCNTL 365

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I+ +CK  ++++A KV ++M   G+     TY +LI+G C   +LDEA     +M+ +G 
Sbjct: 366 INAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGF 425

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN    + L++GFCKK   +   ++ D++ ++GL P    Y +LI   C++G ++ A  
Sbjct: 426 SPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQK 485

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + + M  +G++ D   Y  L      EG      N ++ +  N +      YN L
Sbjct: 486 VFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCL 540



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
           L+  L    +  +A+ + D+M A GL P+     AL+    + ++   AR +FD+++  G
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
           L+ S   YN ++    K G    A A+   M   GV  D  +YN +IA   ++G      
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAM 239

Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
            + + +   G+RA  VT+N L+  LCK G+ K+A  L  EM   +     P+ VTY  LI
Sbjct: 240 CVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQAT---PDNVTYTTLI 296

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDI 526
            G+C+ G +E+A  L  E+   G++P   TY  +  ++ E G + ++
Sbjct: 297 DGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEV 343


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 164/279 (58%), Gaps = 11/279 (3%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E+G   +   FN L+  FCK+ +I  A  VF+ +   G+   VV+YN+L+NG   
Sbjct: 112 YKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG++P+V T + LING CK+  ++ A  LFD++  +GL P+ +T
Sbjct: 172 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 231

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLID +CK GR++ A  +   ML + +LPD+ TYN LI GL ++G+++   ++++E+ 
Sbjct: 232 FTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 291

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI----VTYNVLIKGF 482
             G++   +TY  L+   CK+G        LD  F+  K     NI    V Y  LI G 
Sbjct: 292 MKGLKPDKITYTALIDGCCKEGD-------LDTAFEHRKRMIQENIRLDDVAYTALISGL 344

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           CQ+G+  DA  +L E+L  GL P+  TY ++  E  +KG
Sbjct: 345 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 383



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           +S +   + L+ A ++ G   D    Y+  +  +  +  D+   VL  L K         
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 110

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
             +++   G    +  +NIL+  +CK+  I     A +VF  + + G+ P+ V++NTL++
Sbjct: 111 FYKEILESGYPASLYFFNILMHRFCKERDIRV---AQSVFDAITKWGLRPSVVSYNTLMN 167

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
           G+ +  ++    ++   M + G+   V TY+ LINGLC + K+D+A  L DEM+  GL P
Sbjct: 168 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 227

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           N VT   LI+G CK   V+ A  ++  +  Q L P +ITYNTLI   CK+G ++ A  + 
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 287

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
           + M  +G+ PD  TY  LI G  +EG+++        ++   +R   V Y  L+  LC++
Sbjct: 288 DEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 347

Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           G+S  A  +L EM  +  +   P+  TY ++I  FC+KG +   + LL E
Sbjct: 348 GRSVDAEKMLREMLSVGLK---PDARTYTMIINEFCKKGDVWKGSKLLKE 394



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 163/301 (54%), Gaps = 5/301 (1%)

Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
           L  +K  K   GF  +K   + G  +S+   N L+    KE      + V+  + +  + 
Sbjct: 99  LMKLKYFKLVWGF--YKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLR 156

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
            ++ S+N ++NG  + G L++   +   M + GV P V TY++LI+G CK+    KM  A
Sbjct: 157 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKE---SKMDDA 213

Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
           + +F +M+  G++PN VTF TLIDG CK+  +  A++++++M S  +   ++TYN+LI G
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC  G L +A  L DEM   GLKP+ +T  ALI+G CK+  ++ A      + ++ +   
Sbjct: 274 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLD 333

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
            + Y  LI   C+EGR  DA  M   ML  G+ PD  TY  +I    ++G+V     ++ 
Sbjct: 334 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 393

Query: 424 E 424
           E
Sbjct: 394 E 394



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 140/261 (53%), Gaps = 3/261 (1%)

Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
             ++LM  + K     +    F     +GL+ SV+S N L+   ++ G  ++   +   M
Sbjct: 126 FFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185

Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI 237
               ++ ++ +++ ++NGLCK  K++ A+++ ++M   G+ P  VT+  LIDG+CK G +
Sbjct: 186 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 245

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
                A  ++K M+   +LP+ +T+NTLI G CK  ++  A  + +EM   G+    +TY
Sbjct: 246 D---LALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 302

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +LI+G C +G LD A   R  M+   ++ + V   ALI+G C++     A  +  ++  
Sbjct: 303 TALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 362

Query: 358 QGLSPSVITYNTLIDAYCKEG 378
            GL P   TY  +I+ +CK+G
Sbjct: 363 VGLKPDARTYTMIINEFCKKG 383



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N +    L+  + KN +  L  E +K+     L   +++ N L+  L K+G  +   
Sbjct: 225 LVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 284

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +  EM  + ++ +  ++  +++G CK G L+ A +  + M    +    V Y  LI G 
Sbjct: 285 DLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 344

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
           C++   G+   A+ + ++M+  G+ P+  T+  +I+ FCK  ++    K+ +E
Sbjct: 345 CQE---GRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 109/287 (37%), Gaps = 81/287 (28%)

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
           +Y ++I+ LC    L EA                    +LI     +K    A  +F  I
Sbjct: 3   SYCTMIHFLCTHQMLSEA-------------------KSLIQVVVSRKGKGSASAVFAVI 43

Query: 356 SE-QGLSPS-VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            E +G   S +  ++ LI AY + G + DA        +        T   ++  L +  
Sbjct: 44  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 103

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW---P 470
             + V     E++ +G  A L  +NIL+   CK+   + A S+ D +       KW   P
Sbjct: 104 YFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAI------TKWGLRP 157

Query: 471 NIVTYNV-----------------------------------LIKGFCQKGKLEDANGLL 495
           ++V+YN                                    LI G C++ K++DAN L 
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 217

Query: 496 NELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDI 526
           +E+L KGL+PN  T+                  + ++M+ +  +PD+
Sbjct: 218 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDL 264



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           KNG+      I+  +   S SL  + I  + L+    K        +        GLK  
Sbjct: 241 KNGRVDLALEIYKQM--LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 298

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            ++   L+    KEG  +      K M +  I L+  ++  +++GLC+ G+   A  ++ 
Sbjct: 299 KITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 358

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           +M S+G+ P   TY ++I+ +CKKG + K
Sbjct: 359 EMLSVGLKPDARTYTMIINEFCKKGDVWK 387


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 188/357 (52%), Gaps = 10/357 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +  S N L+R+  +  + +D    ++ MKR+R + +L +F  +++ LCKAG   KA
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 206 SDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
            ++  +M ++G V P    +  ++    K     ++ +A  VF  M + G  P+ + +NT
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAK---RVKEAREVFGQMEKCGFPPDAIAYNT 265

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           +IDG  K  +   A+KV + M +       VTY  L+N LC  G L+ A  L   M ASG
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
            +PN V   +LI+GF K   +++A  LFD++ E G  P VIT+  +ID  CK G  E A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
                M+  G  P+V TY  +I GLS+ G V     IM  ++ +G     VTY  L+   
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGF 445

Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           CK G+  +A  LLDE   ++K    PN+  Y+ L+KG C  G +E+    L++L E+
Sbjct: 446 CKLGRLDEAAQLLDE---LDKCSSSPNLQLYSSLVKGLCDGGSVENT---LDDLFEQ 496



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 188/403 (46%), Gaps = 44/403 (10%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ +L K G  E  E +++ M       N   +  +++G  K+G++ +A  + ++M   G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P V+T+ ++IDG CK G   +  K+   F++M+  G  PN VT+ T+I G  K   ++
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKS---FEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A ++ + M +HG     VTY  L++G C  G+LDEA  L DE+      PN+   ++L+
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 337 NGFCKKKLVE------------------------------------KARVLFDDISEQGL 360
            G C    VE                                    +A  +F  +  +G 
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 361 SPSVITYNTLIDAYCK--EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
            P   TYN LI+  C+  E R+E AFA+ + +   G LPD  TY  L  GL + G V+  
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
             ++ E  + G  A +V Y  L   LC  G+  +AVSL  EM +   +   P+   Y  +
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR---QGGAPDAAAYCCI 654

Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           I G  +  KLEDA    +E++ KG  P   TY  + + +   G
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 195/387 (50%), Gaps = 8/387 (2%)

Query: 139 FKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
           F+ AG+  G +  V + N L+  LV E  +     +++EM +  I  N  SFN ++    
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
           +  + + A    E MK     P + T+ IL+D  CK G   K ++   VF +M+  G +P
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE---VFHEMMAMGFVP 222

Query: 258 NEVTFNT-LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            +   +T ++    K + +  A +VF +M   G     + YN++I+GL   G   EA+ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            D M+A    P  VT   L+N  CK   +E+A  LF  ++  G  P+ + Y +LI  + K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            GRM++A ++ + M++ G  PDV T+  +I GL + GN E       E++  G +  +VT
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y  ++  L K G+   A  ++  M        +P+ VTY  L+ GFC+ G+L++A  LL+
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIA---HGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 497 ELLEKGLIPNQTTYQIVREEMMEKGFI 523
           EL +    PN   Y  + + + + G +
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSV 486



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 179/349 (51%), Gaps = 10/349 (2%)

Query: 155 NQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           + L++ L   G  E+ ++ ++++ K     L+      ++ GLCK G+L++A  I + M 
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           S G  P   TYNILI+G C+     ++ +A A+  D+   G LP+ VT+  L  G CK  
Sbjct: 534 SEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIG 592

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            +  A+K+ EE  S G  A VV Y +L  GLC  G++D AV+L  EM+  G  P+     
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            +ING  K K +E A   FD++  +G  P+V TY  L+ A C  G +++AF     ML R
Sbjct: 653 CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLAR 712

Query: 394 G-VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           G ++  V  Y+ LI G  +   V+    +  ++++ G     VT   L   L + GK++K
Sbjct: 713 GELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
           A  LL E   M      P+  T+  ++ G     +  D +G L +L+++
Sbjct: 773 AQELLQE---MAAGGSPPHAATFTAILDGL----RKSDESGKLLKLVQE 814



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 21/276 (7%)

Query: 278 AMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
           A+  F   G   G    V TYN L+N L  +    +  A+ +EM+ +G+ PN  + N LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-V 395
             F + +  + A   F+ +  +   P + T+  L+D  CK G  E AF + + M+  G V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
            PD + +  ++  L +   V+  R +  ++   G     + YN ++  L K G +++A+ 
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-- 513
           +LD M     +   P  VTY +L+   C+ G LE A  L   +   G  PN   Y  +  
Sbjct: 282 VLDNMLA---KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 514 --------------REEMMEKGFIPDIEGHMYNISG 535
                          +EM+E G+ PD+  H   I G
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 4/204 (1%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            + A   G  + V++   L   L  +G+ +    +++EM R+    +  ++  ++NGL K
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
             KL  A    ++M   G  P V TY  L+   C  G + + +     F+ M+  G L  
Sbjct: 661 GKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR---FEGMLARGELVG 717

Query: 259 EV-TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
            V  ++ LI GFCK   + AA+K+FE+M S G     VT  SL +GL   GK ++A  L 
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777

Query: 318 DEMMASGLKPNVVTSNALINGFCK 341
            EM A G  P+  T  A+++G  K
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRK 801


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 215/444 (48%), Gaps = 43/444 (9%)

Query: 79  YPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHLGFE 137
           Y    S L    +   F  V ++   L      + C  ++ ID+L   Y    +      
Sbjct: 81  YDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLR-NYGLAGRYESSMR 139

Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
            F R  D+G+K SV S N LL  L++  +F+ V  ++K  K                   
Sbjct: 140 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK------------------- 180

Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
                          +S G++P + T N+L+   CKK  I   YK   V  ++   G++P
Sbjct: 181 ---------------ESFGITPNIFTCNLLVKALCKKNDIESAYK---VLDEIPAMGLVP 222

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           N VT+ T++ G+    ++ +A +V EEM   G     +TY  L++G C  G+  EA  + 
Sbjct: 223 NLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVM 282

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
           D+M  + ++PN VT   +I   CK+K   +AR +FD++ ++   P       +IDA C++
Sbjct: 283 DDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCED 342

Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
            ++++A  +   ML    +PD +  + LI  L +EG V   R + +E  + G    L+TY
Sbjct: 343 HKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTY 401

Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
           N L+  +C+ G+  +A  L D+MF+    K  PN  TYNVLI+G  + G +++   +L E
Sbjct: 402 NTLIAGMCEKGELTEAGRLWDDMFE---RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 458

Query: 498 LLEKGLIPNQTTYQIVREEMMEKG 521
           +LE G  PN+TT+ I+ E + + G
Sbjct: 459 MLESGCFPNKTTFLILFEGLQKLG 482



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 204/388 (52%), Gaps = 16/388 (4%)

Query: 79  YPKIRSFLHMFVK-------NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
           YP I+   ++F+         G++ S   IF  L      + R+   ++ L+   ++N +
Sbjct: 111 YPPIKCGENLFIDLLRNYGLAGRYESSMRIF--LRIPDFGVKRSVRSLNTLLNVLIQNQR 168

Query: 132 PHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN 190
             L    FK + + +G+  ++ +CN L++AL K+   E    V  E+    +  NL ++ 
Sbjct: 169 FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYT 228

Query: 191 FVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
            +L G    G +  A  ++E+M   G  P  +TY +L+DGYCK   +G+  +A  V  DM
Sbjct: 229 TILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCK---LGRFSEAATVMDDM 285

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
            +N I PNEVT+  +I   CK++    A  +F+EM              +I+ LC D K+
Sbjct: 286 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKV 345

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL 370
           DEA  L  +M+ +   P+    + LI+  CK+  V +AR LFD+  ++G  PS++TYNTL
Sbjct: 346 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTL 404

Query: 371 IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNIMNELVNNG 429
           I   C++G + +A  + + M +R   P+  TYN LI GLS+ GNV EGVR ++ E++ +G
Sbjct: 405 IAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVR-VLEEMLESG 463

Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLL 457
                 T+ IL   L K GK + A+ ++
Sbjct: 464 CFPNKTTFLILFEGLQKLGKEEDAIKIV 491


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 107/484 (22%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV + N  L AL K    +     +++M+RR    +  +++ VL GLCKAG+L+KA
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE-NGILPNEVTFNT 264
            +++  ++  GV   V+TY+++IDG CK     ++  A  +FK M    G +P+ VTFN+
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKA---SRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C  E +S A  +FE M   G    V++Y++L++GLC  G+LDEA  L +EM+   
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 325 LKPNVVTSNALINGFCK-----------KKLVEK-------------------------- 347
             P++V   + + G CK           +K+V K                          
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 348 ---------------ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA---FAMRNS 389
                          A   F+++  +   PS   +NTLI A CK  R+ D    F    S
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +    P++ TYN ++  L +   ++  + ++NE+ N G+   +VTY+ LV  LCK GK
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 450 SKKAVSLLDEMFK--------------------------------MEKEKKWPNIVTYNV 477
             +A  LL+EM K                                M+     P++VTYN 
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           L+ G C+ G++++A   L +++     P+  +Y I                + +EM+++G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 522 FIPD 525
            +PD
Sbjct: 510 VLPD 513



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 198/428 (46%), Gaps = 58/428 (13%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G + +V+S + LL  L K G+ ++   +++EM  +    +L ++   + 
Sbjct: 163 AFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVT 222

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------GKM 240
           GLCKA ++ +A D    M + G     V ++ +I   CKKG                G +
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGML 282

Query: 241 YKADAVFKDMVE------------------------NGIL--------------PNEVTF 262
            +A   F++M+                         +G+L              PN  T+
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N ++D  CK + +  A ++  EM ++G++  VVTY++L++GLC  GKLD A  L +EM  
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P+  T  +++N   K   V+ A    + +  +G +P ++TYNTL+D  CK GR+++
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      M+     PDV +Y  +I  L R G   G   I  E+V  G+    V Y+ L+ 
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            L ++G    A+ LL            P+ V + +++ G C+ GK EDA  ++  + + G
Sbjct: 523 GLARNGLEDLALELLKTSLCK------PDFVMHKMVLDGLCKAGKAEDACEVVERMADAG 576

Query: 503 LIPNQTTY 510
              +  TY
Sbjct: 577 FPADAFTY 584



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 168/308 (54%), Gaps = 9/308 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRR---IELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           N L+ A+ K  +  D   +++ MK  +      NL+++N +++ LCKA +L++A +++ +
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M + G+SP VVTY+ L+DG CK   +GK+ +A  + ++M + G+ P+  T  ++++   K
Sbjct: 365 MANYGLSPDVVTYSALVDGLCK---LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A+   E M + G    +VTYN+L++GLC  G++DEA+    +M+A+   P+V +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              +I   C+      A  +F ++ ++G+ P  + Y++L+D   + G  + A  +  + L
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +   PD   +  ++ GL + G  E    ++  + + G  A   TY  +V  L K GK  
Sbjct: 542 CK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598

Query: 452 KAVSLLDE 459
           KA  L+D+
Sbjct: 599 KARQLVDD 606



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 52/319 (16%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST-----CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           + +H   K+ +      +F  + +     C  +L   +I++D L     K  +     E 
Sbjct: 306 TLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL----CKAKQLDEAQEL 361

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN--FVLNGL 196
                +YGL   V++ + L+  L K GK +    + +EM +  +    DSF    +LN L
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV--FPDSFTDASILNAL 419

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
            KAGK++ A   +E MK+ G +P +VTYN L+DG CK G I                   
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD--ENISAAMKVF 282
                        G+   A A+F++MV+ G+LP+ V +++L+DG  ++  E+++      
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA-----L 534

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E + +       V +  +++GLC  GK ++A  + + M  +G   +  T  ++++G  K 
Sbjct: 535 ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL 594

Query: 343 KLVEKARVLFDDISEQGLS 361
             V+KAR L DD SE   S
Sbjct: 595 GKVDKARQLVDDASETHTS 613



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 351 LFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           LFD +  Q G   SV TYN  +DA  K    + A+     M  RG  PD  TY+ ++ GL
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G ++  + ++ +L  +G++  ++TY++++   CK  +   A+    E+FK       
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL----EIFKTMSSGGG 139

Query: 470 --PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------- 513
             P++VT+N L+KG C   ++ +A  L   + + G  PN  +Y  +              
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEAC 199

Query: 514 --REEMMEKGFIPDIEGHMYNISG 535
              EEM+EK  +PD+  +   ++G
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTG 223


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 244/519 (47%), Gaps = 64/519 (12%)

Query: 45  LILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHA 104
           ++LR    S   LR          L H    A     +R F HM+  +G        ++A
Sbjct: 76  VVLRLHALSPPPLRPLFDRTFRSLLTHFSRYALTPLMLRLFAHMY-HHGPPAPTGATYNA 134

Query: 105 LSTCSDSLCR---------------------NSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           L     +LCR                     ++   + L+L Y +  +  +  + F +  
Sbjct: 135 LIR---ALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G     +S   L+    + G+ ++   +++E++    + ++ +   ++ GLC A +  
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGE 247

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +++ MK LG  P    Y  L+D +C++    K  +A+ +  +M +NG++P  VT  
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQ---KAEEAEKMLNEMFDNGLVPCAVTCT 304

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            +++ +C++  +S A++VFE M   G    V TYN+++ G C  GK+ +A+AL D+M   
Sbjct: 305 AVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMREC 364

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P+VVT N LI G C    +E A  L   +   GL+    TYN LIDA CK G++++A
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
            ++ + +  RG+ P+  T+N +I GL + G  +     + ++V+ G      TY+  +  
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIEN 484

Query: 444 LCKDGKSKKAVSLLDEMFKME----------------KEKKW----------------PN 471
           LCK   S++ +S +DEM + +                KE+ +                P+
Sbjct: 485 LCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           +VTY   ++ +C +G+L +A  ++ E+ + G+I +   Y
Sbjct: 545 VVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAY 583



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 188/378 (49%), Gaps = 6/378 (1%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
           G    ++  + G + +  +   L+    +E K E+ E +  EM    +     +   V+N
Sbjct: 249 GLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVN 308

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
             C+ G+++ A  + E MK  G  P V TYN ++ G+C    +GK+YKA A+   M E G
Sbjct: 309 AYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCN---VGKVYKAMALLDQMRECG 365

Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
           + P+ VT+N LI G C D +I +A ++   M  +G+AA   TYN LI+ LC  GK+DEA 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
           +L D +   G++PN VT N +ING CK    + A    + +   G +P   TY+  I+  
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485

Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
           CK     +  +  + ML + V P    Y  +I  L +E N      I  ++V+ G    +
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545

Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
           VTY   V A C +G+  +A +++ E   M+K     + + YN LI G    GK + A  +
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVME---MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTI 602

Query: 495 LNELLEKGLIPNQTTYQI 512
           L  +     +PN  T+ I
Sbjct: 603 LKHMTGVASMPNHFTFFI 620



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 204/456 (44%), Gaps = 67/456 (14%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL    ++C  ++ A  +EG+      V++ MK +  E N+ ++N ++ G C  GK+ 
Sbjct: 293 DNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVY 352

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  +++ M+  GV P VVTYN+LI G C  G I   ++   + + M  NG+  ++ T+N
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR---LLRLMEGNGLAADQYTYN 409

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LID  CK   +  A  +F+ +   GI    VT+N++INGLC  GK D A    ++M+++
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  P+  T +  I   CK K   +     D++ ++ + PS + Y  +ID   KE     A
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             +   M+  G  PDV TY   +     EG +    N++ E+   G+    + YN L+  
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 444 LCKDGKSKKAVSLLD--------------------------------------------- 458
               GK+  AV++L                                              
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649

Query: 459 --EMFKMEKEKKWPNIV-TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
             E+F++ K+   P+    Y  +++GF ++ +L++   L++ + E  L  N+  Y  +  
Sbjct: 650 VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709

Query: 516 ----------------EMMEKGFIPDIEGHMYNISG 535
                            M+  GF+P++  + Y +SG
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSG 745



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 164/401 (40%), Gaps = 86/401 (21%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL +   + N L+ AL K GK ++   ++  ++ R I  N  +FN V+NGLCK GK + A
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA 459

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGG--------------------------IGK 239
              +E M S G +P   TY+  I+  CK  G                          I +
Sbjct: 460 CTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDR 519

Query: 240 MYK------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
           ++K      A  ++  MV  G  P+ VT+ T +  +C +  +  A  V  EM   GI   
Sbjct: 520 LFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVD 579

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASG----------------------------- 324
            + YN+LI+G    GK D AV +   M                                 
Sbjct: 580 AMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTT 639

Query: 325 -----------------LKPNVVTSNA-----LINGFCKKKLVEKARVLFDDISEQGLSP 362
                            +K N V S+A     ++ GF +++ +++   L   + E  L  
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPL 699

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
           +   Y +L++ +CK     DA+A+  SM+  G LP++ +Y  L++G + EG  +  + I 
Sbjct: 700 NEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKS---KKAVSLLDEM 460
             L         + + I++  L + G        +S+L++M
Sbjct: 760 RGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQM 800



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/406 (20%), Positives = 163/406 (40%), Gaps = 58/406 (14%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           K GK     ++F  L      +  NS+  + ++    K  K  +     ++    G    
Sbjct: 417 KTGKVDEACSLFDGLEY--RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474

Query: 151 VLSCNQLLRALVK-EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
             + +  +  L K +G  E + ++  EM ++ ++ +  ++  V++ L K      A+ I 
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFI-DEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIW 533

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
             M SLG SP VVTY   +  YC +G   ++++A+ V  +M + GI+ + + +NTLIDG 
Sbjct: 534 GQMVSLGCSPDVVTYTTSVRAYCNEG---RLHEAENVVMEMKKGGIIVDAMAYNTLIDGH 590

Query: 270 C---------------------------------------------------KDENISAA 278
                                                               K   ++  
Sbjct: 591 TSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV 650

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
            ++FE M  + + +    Y +++ G   + +LDE  +L   M    L  N     +L+N 
Sbjct: 651 FELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNC 710

Query: 339 FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPD 398
           FCK ++   A  L   +   G  P++I+Y  L+  +  EG+ + A  +   +  +    D
Sbjct: 711 FCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTD 770

Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
              +  +I GL R+G+ +   ++++ L     +    TY +L   L
Sbjct: 771 EIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 13/278 (4%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++    +RA   EG+  + E V  EMK+  I ++  ++N +++G    GK + A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599

Query: 206 SDIMEDMKSLGVSPKVVTYNILI----------DGYCKKGGIGKMYK-ADA--VFKDMVE 252
             I++ M  +   P   T+ IL+          D   K   + K  + AD   +F+ M +
Sbjct: 600 VTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKK 659

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
           N +  +   +  +++GF ++  +     +   M    +      Y SL+N  C      +
Sbjct: 660 NSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPD 719

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A AL   M+  G  PN+++   L++GF  +   ++A+ +F  +  +  +   I +  +ID
Sbjct: 720 AWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIID 779

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
              ++G  +    M + +      P   TY  L   LS
Sbjct: 780 GLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELS 817



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL-VTYNILVGALCKDGKSKKAVSLLDE 459
           T+  L+   SR      +  +   + ++G  A    TYN L+ ALC+    + A   L  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 460 MFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
           M +      W P+  T+N LI G+C+  +L+ A  L +++  +G   +  +Y  + E   
Sbjct: 155 MVR----SGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFC 210

Query: 519 EKGFI 523
           E G +
Sbjct: 211 ETGRV 215


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 235/501 (46%), Gaps = 32/501 (6%)

Query: 55  KELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDS 111
           K  R   +  L GR++   V     P I +F   +    +  +F  V  +   +      
Sbjct: 258 KSGRVEEAFRLKGRMVEGRV----RPSIVTFGILISGLARGQQFGEVGAVLQEMQ--GFG 311

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           +  N +I + ++  + +        + F      G+K +V++ N + +AL KEG+ E  E
Sbjct: 312 ITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAE 371

Query: 172 YVYKEMKRRRIELNLDSFNFVLNG-LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
            +  EM    + ++   FN V+   L   G+L+    ++ +M +  + P        I  
Sbjct: 372 KILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQE 431

Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
            CK G   K  +A  ++  ++  G+  N  T N LI G C+  N+  A KV + M + G+
Sbjct: 432 LCKSG---KHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488

Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
               +TYN +I G C   K+DEA+ LRD+M+  G KP++ T N  ++ +C    VE+   
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILH 548

Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
           L D +  +GL P ++TY T+ID YCK   M  A      ++  G+ P+   YN LI G  
Sbjct: 549 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYG 608

Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
           R GN+     I++ +  NG++   VTYN L+  +C  G  ++  ++  +    + E    
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIEL--- 665

Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR---------------- 514
            ++ Y ++I+GFC+ GK+++A     E+  +G+ PN+ TY  +                 
Sbjct: 666 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725

Query: 515 EEMMEKGFIPDIEGHMYNISG 535
           +EM+  G +PD   +   ISG
Sbjct: 726 DEMVSLGIVPDSVSYNTLISG 746



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 239/515 (46%), Gaps = 84/515 (16%)

Query: 69  LLHSLVVAK-KYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
           LL SLV  +   P  R  +   ++   F  +S    A +  +DS C  +   D+L+ A +
Sbjct: 97  LLQSLVADRASLPSARRLVSRLLR---FNPLSV---AAAAIADSHC--TATADLLVRACL 148

Query: 128 KNMKP---HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR-RRIE 183
            +  P       +AF      G   S+ +C+ L+ AL   G+ +    V+ EM+  + + 
Sbjct: 149 NSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVA 208

Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK- 242
            ++ ++  ++  LC+AG+++ A  ++ +++  G+ P VVTYN+L+D  CK G + + ++ 
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268

Query: 243 -------------------------------ADAVFKDMVENGILPNEVTFNTLIDGFCK 271
                                            AV ++M   GI PNEV +N +I   C+
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCR 328

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG------- 324
             + S A+K+F+EM S GI   VVTYN +   LC +G+++ A  + DEM+ +G       
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388

Query: 325 -----------------------------LKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
                                        LKPN     A I   CK    E+A  ++  +
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +GL  +V T N LI   C+   M++A  +  +M++ GV  D  TYN +I G  +   +
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +    + ++++  G +  L T+NI +   C  GK ++ + LLD+   M+ E   P+IVTY
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ---MKSEGLKPDIVTY 565

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             +I G+C+   +  AN  L EL++ GL PN   Y
Sbjct: 566 GTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIY 600



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 42/419 (10%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G++ +V++ N L+ AL K G+ E+   +   M   R+  ++ +F  +++GL +  +  + 
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++++M+  G++P  V YN +I  +C+KG   +  K   +F +MV  GI    VT+N +
Sbjct: 301 GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALK---LFDEMVSKGIKQTVVTYNLI 357

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL------------------------- 300
               CK+  +  A K+ +EM   G+      +NS+                         
Sbjct: 358 AKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF 417

Query: 301 -----------INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
                      I  LC  GK +EA  +  +++  GL  NV TSNALI+G C+   +++A 
Sbjct: 418 LKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEAT 477

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   +   G+    ITYN +I   CK  +M++A  +R+ M+ RG  PD+ T+N  +   
Sbjct: 478 KVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTY 537

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G VE + ++++++ + G++  +VTY  ++   CK     KA   L E+    K    
Sbjct: 538 CNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM---KNGLR 594

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
           PN V YN LI G+ + G + DA G+L+ +   G+ P   TY  +   M   G + +++ 
Sbjct: 595 PNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKA 653



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 193/384 (50%), Gaps = 22/384 (5%)

Query: 120 DMLMLAYVKNM----KPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           D LM A ++ +    K     E + +    GL  +V + N L+  L +    ++   V K
Sbjct: 422 DALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK 481

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
            M    +EL+  ++N ++ G CKA K+++A  + +DM   G  P + T+NI +  YC   
Sbjct: 482 AMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCN-- 539

Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
            +GK+ +   +   M   G+ P+ VT+ T+IDG+CK +++  A +   E+  +G+    V
Sbjct: 540 -LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV 598

Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
            YN+LI G   +G + +A+ + D M  +G++P  VT N+L+   C   LVE+ + +F   
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             + +   VI Y  +I  +CK G++++A      M  RG+ P+  TY  L+   S+ GN 
Sbjct: 659 IVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNK 718

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF----KMEKEKKWPN 471
           E    + +E+V+ G+    V+YN L+   C+       V  LD+M     +M  +    +
Sbjct: 719 EEASKLFDEMVSLGIVPDSVSYNTLISGFCE-------VDSLDKMVESPAEMSSQVLKQD 771

Query: 472 IVTYNVLIKG----FCQKGKLEDA 491
             +YN  + G    +CQK  + +A
Sbjct: 772 GCSYNAFVDGITTPWCQKEAVSNA 795



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 127/269 (47%), Gaps = 11/269 (4%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTC-SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           FLH +   GK   V  I H L    S+ L  + +    ++  Y K    H   E      
Sbjct: 533 FLHTYCNLGK---VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM 589

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GL+ + +  N L+    + G   D   +   MK   I+    ++N ++  +C AG + 
Sbjct: 590 KNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVE 649

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +   +        +   V+ Y I+I G+CK   IGK+ +A   FK+M   GI PN++T+ 
Sbjct: 650 EVKAVFAQCIVKDIELGVIGYTIIIQGFCK---IGKIDEAVMYFKEMHSRGIPPNKMTYT 706

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+  + K  N   A K+F+EM S GI    V+YN+LI+G C    LD+ V    EM + 
Sbjct: 707 TLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQ 766

Query: 324 GLKPNVVTSNALING----FCKKKLVEKA 348
            LK +  + NA ++G    +C+K+ V  A
Sbjct: 767 VLKQDGCSYNAFVDGITTPWCQKEAVSNA 795


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 197/377 (52%), Gaps = 6/377 (1%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S + ++    KEG       ++ +M    I  N+ + N V++GLCK   ++KA  +++
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M    + P   TYN LI GY   G   +  +A  + K+M  +G  PN VT+N LID  C
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSG---QWTEAVRILKEMSRDGQRPNVVTYNMLIDCLC 237

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K    + A ++F  M   G      TY SL++G   +G L E   ++D M+ +G++ N  
Sbjct: 238 KSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHH 297

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T +  I  +CK   +++A + F  + + G  P ++TY T+ID  CK GR++DA +    M
Sbjct: 298 TFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D G+ P++ T+  LI G S  G  E    +  E+++ G+   +  +  ++  L K+GK 
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKV 417

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            +A  L D    M +    PN+V+YN +I G+   G++ +   LL+++L  GL P   T+
Sbjct: 418 TEAQKLFD---LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF 474

Query: 511 QIVREEMMEKGFIPDIE 527
             + + M+  G  PD++
Sbjct: 475 NTLLDGMVSMGLKPDVD 491



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 195/358 (54%), Gaps = 25/358 (6%)

Query: 188 SFNFVLNGLCKAGKLNKASDI-MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           +F  +L  LC   + + A +I +  M  LG +P V +Y+ L+ G C +    K  +A  +
Sbjct: 50  AFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEK---KCEEAAEL 106

Query: 247 FKDMVENG--ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
              M E+G    P+ V+++T+I GF K+ ++  A  +F +M  HGI   VVT NS+I+GL
Sbjct: 107 IHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 166

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C    +D+A A+  +M+   + PN  T N+LI+G+       +A  +  ++S  G  P+V
Sbjct: 167 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 226

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TYN LID  CK G   +A  + NSM+  G  PD +TY  L+ G + EGN+  + N+ + 
Sbjct: 227 VTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDL 286

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V NGMR+   T++I + A CK G+  +A SL     KM++    P+IVTY  +I G C+
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEA-SL--TFIKMQQLGFMPDIVTYTTVIDGLCK 343

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMMEKGFIPDI 526
            G+L+DA     ++++ GL PN  T+  +                  EMM++G  PD+
Sbjct: 344 IGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 220/468 (47%), Gaps = 45/468 (9%)

Query: 56  ELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRN 115
           EL  +  +     LL  L   KK  +    +HM  ++G              C   +   
Sbjct: 77  ELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDG------------DNCPPDVVSY 124

Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
           S +I      + K       +  F +  D+G+  +V++CN ++  L K    +  E V +
Sbjct: 125 STVIH----GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
           +M    I  N  ++N +++G   +G+  +A  I+++M   G  P VVTYN+LID  CK G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 236 GIGKMYKADA--VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                + A+A  +F  M+++G  P+  T+ +L+ G+  + N+     V + M  +G+ + 
Sbjct: 241 -----FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSN 295

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
             T++  I   C  G+LDEA     +M   G  P++VT   +I+G CK   ++ A   F 
Sbjct: 296 HHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFC 355

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
            + + GLSP++IT+ TLI  +   G+ E A  +   M+DRG+ PDV+ +  +I  L +EG
Sbjct: 356 QMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEG 415

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
            V   + + + +   G +  +V+YN ++      G+  + + LLD+M  +  +   P  V
Sbjct: 416 KVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLK---PTAV 472

Query: 474 TYNVLIKGF-------------------CQKGKLEDANGLLNELLEKG 502
           T+N L+ G                    C+ G++ED   L  E+L K 
Sbjct: 473 TFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKA 520



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 24/339 (7%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H ++ +G++T    I   +S   D    N +  +ML+    K+       E F    
Sbjct: 196 SLIHGYLSSGQWTEAVRILKEMS--RDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMI 253

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G K    +   LL     EG   ++  V   M +  +  N  +F+  +   CK G+L+
Sbjct: 254 QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLD 313

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +AS     M+ LG  P +VTY  +IDG CK   IG++  A + F  M+++G+ PN +TF 
Sbjct: 314 EASLTFIKMQQLGFMPDIVTYTTVIDGLCK---IGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TLI GF        A ++F EM   GI   V  + ++I+ L  +GK+ EA  L D M  +
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTL------------- 370
           G KPNVV+ N +I+G+     V +   L DD+   GL P+ +T+NTL             
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDV 490

Query: 371 ------IDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
                 ID+ C++GR+ED   +   ML +    D  T N
Sbjct: 491 DTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 6/240 (2%)

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
           G+  +A  + T+  LI+  C  G L+   A   +++ +GL+ + V    L+   C KK  
Sbjct: 5   GAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRT 64

Query: 346 EKA-RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG--VLPDVSTY 402
             A  ++   + E G +P V +Y+TL+   C E + E+A  + + M + G    PDV +Y
Sbjct: 65  SDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSY 124

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
           + +I G  +EG+V     +  +++++G+   +VT N ++  LCK     KA ++L +M  
Sbjct: 125 STVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI- 183

Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
              E   PN  TYN LI G+   G+  +A  +L E+   G  PN  TY ++ + + + GF
Sbjct: 184 --DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 193/353 (54%), Gaps = 6/353 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A ++ G   D    ++  K+ +I +  D+   VL  L +        D  +++   G
Sbjct: 72  LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
               +  +NIL+  +CK+G   +M  A +VF  + + G+ P+ V+FNTLI+G+ K  ++ 
Sbjct: 132 YPASLYFFNILMQRFCKEG---EMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD 188

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++   M + G    V TY+ LINGLC +GKLDEA  L +EM+ +GL PN VT   LI
Sbjct: 189 EGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK + V+ A  ++  +  QGLSP +ITYNTLI   CK+G ++    + + M+  G+ 
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  +Y  LI G  +EG++E    + N+++   +R   V Y  L+  LC++G++  A  +
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKM 368

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           L EM  +  +   P+  TY ++I  FC+K   + A+ LL E+   G +P   T
Sbjct: 369 LREMLSVGLK---PDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 205/408 (50%), Gaps = 32/408 (7%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            LM+AY+++       + F+    + ++    +C ++L  L++   F+ V   YKE+   
Sbjct: 71  GLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
               +L  FN ++   CK G++  A  + + +   G+ P VV++N LI+GY K G +   
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 238 -----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                                        GK+ +A+ +F +M++NG++PN VTF TLI G
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+E +  AM+++++M S G++  ++TYN+LI GLC  G+L +   L DEM+ +GLKP+
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            ++   LI+G CK+  +E A  L + + ++ +    + Y  LI   C+EGR  DA  M  
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLR 370

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            ML  G+ PD  TY  +I    ++ + +    ++ E+  +G   G+VT
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 163/274 (59%), Gaps = 3/274 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  +  A  VF+ +   G+   VV++N+LING   
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG +P+V T + LING CK+  +++A  LF+++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI  +CK  +++ A  +   ML +G+ PD+ TYN LI GL ++G ++ V ++++E++
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG++   ++Y  L+   CK+G  + A+ L +   KM +E    + V Y  LI   C++G
Sbjct: 304 MNGLKPDKISYTTLIDGSCKEGDLEIALELRN---KMIQESIRLDDVAYTALISCLCREG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +  DA  +L E+L  GL P+  TY ++  E  +K
Sbjct: 361 RAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 243 ADAVFKDMVEN--GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           A  VF+ ++E     + +   F+ L+  + +   +  A++ F     H I     T   +
Sbjct: 48  ASDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKV 107

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           +  L              E++  G   ++   N L+  FCK+  +  A+ +FD I++ GL
Sbjct: 108 LEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGL 167

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
            PSV+++NTLI+ Y K G +++ F ++++M   G  PDV TY+ LI GL +EG ++    
Sbjct: 168 RPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANE 227

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
           + NE+++NG+    VT+  L+   CK+ K   A+ +  +M     +   P+++TYN LI 
Sbjct: 228 LFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLS---QGLSPDLITYNTLIY 284

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           G C+KG+L+  + L++E++  GL P++ +Y
Sbjct: 285 GLCKKGELKQVHDLIDEMIMNGLKPDKISY 314



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 136/246 (55%), Gaps = 3/246 (1%)

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           ++E+   G  A +  +N L+   C +G++  A ++ D +   GL+P+VV+ N LING+ K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +++   L   +   G  P V TY+ LI+  CKEG++++A  + N MLD G++P+  T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  LI G  +   V+    I  ++++ G+   L+TYN L+  LCK G+ K+   L+DEM 
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            M   K  P+ ++Y  LI G C++G LE A  L N+++++ +  +   Y  +   +  +G
Sbjct: 304 -MNGLK--PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREG 360

Query: 522 FIPDIE 527
              D E
Sbjct: 361 RAGDAE 366


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 227/514 (44%), Gaps = 80/514 (15%)

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
           + S +  +  +G F SV  +   +   +  +   S I+  +  AY K   P    + F R
Sbjct: 80  LSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIV--VFRAYGKAHLPDKAVDLFHR 137

Query: 142 AGD-YGLKSSVLSCNQLLRALVKEGKF----EDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
             D +  K SV S N +L  ++ EG +    E  +YV        I  N  SFN V+  L
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CK   +++A ++   M      P   TY  L+DG CK+  I +   A  +  +M   G  
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE---AVLLLDEMQSEGCS 254

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ V +N LIDG CK  +++   K+ + M   G     VTYN+LI+GLC+ GKLD+AV+L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLV------------------------------- 345
            + M++S   PN VT   LING  K++                                 
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374

Query: 346 ----EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
               E+A  L+  ++E+G  P+++ Y+ L+D  C+EG+  +A  + N M+  G LP+  T
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA-------- 453
           Y+ L+ G  + G  E    +  E+   G       Y++L+  LC  G+ K+A        
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494

Query: 454 ---------------------------VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
                                      + L  EM   E+ K  P++VTYN+L+ G C + 
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            +  A  LLN +L++G  P+  T       + EK
Sbjct: 555 DISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 149/274 (54%), Gaps = 7/274 (2%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+  LVK+ +  D   +   M+ R   LN   ++ +++GL K GK  +A  +   M   G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
             P +V Y++L+DG C++G   K  +A  +   M+ +G LPN  T+++L+ GF K     
Sbjct: 393 CKPNIVVYSVLVDGLCREG---KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
            A++V++EM   G +     Y+ LI+GLC  G++ EA+ +  +M+  G+KP+ V  +++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509

Query: 337 NGFCKKKLVEKARVLFDDI---SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            G C    ++ A  L+ ++    E    P V+TYN L+D  C +  +  A  + NSMLDR
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569

Query: 394 GVLPDVSTYNCLIAGLSREGN-VEGVRNIMNELV 426
           G  PDV T N  +  LS + N  +  R+ + ELV
Sbjct: 570 GCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 33/368 (8%)

Query: 61  HSLLLTGRL------LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDS 111
           H L L G+L      L  +V +K  P   ++   ++  VK  + T    +  ++      
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
           L  N  I  +L+    K  K       +++  + G K +++  + L+  L +EGK  + +
Sbjct: 360 L--NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            +   M       N  +++ ++ G  K G   +A  + ++M   G S     Y++LIDG 
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH--- 288
           C   G+G++ +A  V+  M+  GI P+ V ++++I G C   ++ AA+K++ EM      
Sbjct: 478 C---GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK-LVEK 347
                VVTYN L++GLC+   +  AV L + M+  G  P+V+T N  +N   +K    +K
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDK 594

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
            R   +++  + L               K  R+  A  +   ML + + P  ST+  ++ 
Sbjct: 595 GRSFLEELVVRLL---------------KRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639

Query: 408 GLSREGNV 415
            + +   +
Sbjct: 640 EICKPKKI 647



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 33/284 (11%)

Query: 91  KNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           K GK     +++  ++   C  ++   S+++D L     +  KP+   E   R    G  
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL----CREGKPNEAKEILNRMIASGCL 429

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            +  + + L++   K G  E+   V+KEM +     N   ++ +++GLC  G++ +A  +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV---ENGILPNEVTFNTL 265
              M ++G+ P  V Y+ +I G C   GIG M  A  ++ +M+   E    P+ VT+N L
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLC---GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL------CVDGK--LDE----- 312
           +DG C  ++IS A+ +   M   G    V+T N+ +N L      C  G+  L+E     
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRL 606

Query: 313 --------AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
                   A  + + M+   L P   T   ++   CK K +  A
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 209/425 (49%), Gaps = 44/425 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR---RRIELNLDSFNFVLNG 195
           F+R  + G    V S N L++ L  E K ++   +   M          N+ S++ +++G
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
             K G+++KA  + ++M   G  P VVTY+ LIDG CK      M KA+A+ + M + G+
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA---MNKAEAILQHMFDKGV 269

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
           +PN  T+N +I G+C    +  A+++ ++M   G+   VVTY  LI   C  G+  EA +
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARS 329

Query: 316 LRDEMMASGLKPNVVTSNALING-----------------------------------FC 340
           + D M+  G KPN    + L++G                                   + 
Sbjct: 330 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 389

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K   V+KA   F ++ + GL P V++Y+T+I   CK GR+EDA    N M+  G+ P++ 
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
           ++  LI GL   G  + V  +  E++N G+    +  N ++  LCK+G+  +A    D +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
             +  +   PN+V+YN LI G+C  GK++++    + ++  GL P+  TY  +     + 
Sbjct: 510 IHIGVK---PNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKN 566

Query: 521 GFIPD 525
           G + D
Sbjct: 567 GRVED 571



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 182/327 (55%), Gaps = 10/327 (3%)

Query: 188 SFNFVLNGLCKAGKLNKASD-IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
           + N ++ GLC   + + A D +   M  LG +P V +YN LI G C +    K  +A  +
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEK---KSQEALEL 187

Query: 247 FKDMVENG---ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
              M  +G     PN V+++T+IDGF K+  +  A  +F+EM   G    VVTY+SLI+G
Sbjct: 188 LLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDG 247

Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
           LC    +++A A+   M   G+ PN  T N +I G+C    +E+A  L   +S  GL P 
Sbjct: 248 LCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 307

Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
           V+TY  LI  YCK GR  +A ++ +SM+ +G  P+ + Y+ L+ G + +G +  VR++++
Sbjct: 308 VVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 367

Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
            ++ +G+      +NIL+ A  K G   KA++   E   M +    P++V+Y+ +I   C
Sbjct: 368 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE---MRQNGLRPDVVSYSTVIHILC 424

Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTY 510
           + G++EDA    N+++ +GL PN  ++
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLSPNIISF 451



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 215/422 (50%), Gaps = 41/422 (9%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            K+    GL+  V++   L++   K G+  +   V+  M R+  + N   ++ +L+G   
Sbjct: 296 LKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYAT 355

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G L    D+++ M   G+  +   +NILI  Y K G + K   A   F +M +NG+ P+
Sbjct: 356 KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA---FTEMRQNGLRPD 412

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            V+++T+I   CK   +  A+  F +M S G++  ++++ SLI+GLC  G+  +   L  
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+  G+ P+ +  N +++  CK+  V +A+  FD +   G+ P+V++YNTLID YC  G
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVG 532

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE---------------------- 416
           +M+++    + M+  G+ PD  TYN L+ G  + G VE                      
Sbjct: 533 KMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 592

Query: 417 -------------GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKM 463
                          R +  ++V+ G +  + TYN ++G LC++    +A+ + +++   
Sbjct: 593 IILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
           E E    ++ T+N++I    + G++++A  L + ++ +G +P+  TY ++ +  +E+G +
Sbjct: 653 EFEL---DVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLL 709

Query: 524 PD 525
            +
Sbjct: 710 EE 711



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 194/367 (52%), Gaps = 6/367 (1%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+ A  K G  +     + EM++  +  ++ S++ V++ LCK G++  A      M S
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G+SP ++++  LI G C    IG+  K + +  +M+  GI P+ +  NT++D  CK+  
Sbjct: 442 EGLSPNIISFTSLIHGLC---SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A   F+ +   G+   VV+YN+LI+G C  GK+DE++   D M++ GL+P+  T NA
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L+NG+ K   VE A  L+ ++  + +    IT N ++    + GR+  A  +   M+DRG
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618

Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
               + TYN ++ GL     V+    +  +L +      + T+NI++ AL K G+  +A 
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678

Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
           SL   M         P+++TY+++IK   ++G LE+++ L   + + G   +     ++ 
Sbjct: 679 SLFSAMV---LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735

Query: 515 EEMMEKG 521
             ++EKG
Sbjct: 736 RRLLEKG 742



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 225/444 (50%), Gaps = 10/444 (2%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
            LH +   G    V  +   +    D +       ++L+ AY K+        AF     
Sbjct: 349 LLHGYATKGALIDVRDLLDLM--IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQ 406

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
            GL+  V+S + ++  L K G+ ED  Y + +M    +  N+ SF  +++GLC  G+  K
Sbjct: 407 NGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKK 466

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
             ++  +M + G+ P  +  N ++D  CK+   G++ +A   F  ++  G+ PN V++NT
Sbjct: 467 VEELAFEMINRGIHPDAIFMNTIMDNLCKE---GRVVEAQDFFDMVIHIGVKPNVVSYNT 523

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           LIDG+C    +  ++K F+ M S G+     TYN+L+NG   +G++++A+AL  EM    
Sbjct: 524 LIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKD 583

Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
           +K   +TSN +++G  +   +  AR L+  + ++G    + TYNT++   C+   +++A 
Sbjct: 584 VKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 643

Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
            M   +  +    DV T+N +I  L + G ++  +++ + +V  G    ++TY++++ + 
Sbjct: 644 RMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSR 703

Query: 445 CKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            ++G  +++    D++F  MEK     +    NV+I+   +KG +  A   L ++ EK  
Sbjct: 704 IEEGLLEES----DDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNF 759

Query: 504 IPNQTTYQIVREEMMEKGFIPDIE 527
               +T  ++   + EK +  +++
Sbjct: 760 SVEASTAALLIPIVSEKKYQKEVK 783



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 199/416 (47%), Gaps = 41/416 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKF-----EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           G+ S   +C +L R ++   +      ED   ++ E+  +    ++ +FN VL  + +A 
Sbjct: 4   GVSSGRRTCLELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARAD 63

Query: 201 KLNK-------ASDIMEDMKSLGV---SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM 250
             +        A  +   M   GV   +       ILI  +C    +G++  A A F   
Sbjct: 64  SSSSPRHSAALAVSLFNTMARSGVNMMAANRYIIGILIRCFCT---VGRLDLAFAAFALF 120

Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMK-VFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           ++ G     VT N LI G C  +    AM  VF  M   G    V +YN+LI GLCV+ K
Sbjct: 121 LKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKK 180

Query: 310 LDEAVALRDEMMASG---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
             EA+ L   M A G     PNVV+ + +I+GF K+  V+KA  LFD++  QG  P V+T
Sbjct: 181 SQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVT 240

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y++LID  CK   M  A A+   M D+GV+P+  TYN +I G    G +E    ++ ++ 
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            +G++  +VTY +L+   CK G+  +A S+ D M    ++ + PN   Y++L+ G+  KG
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV---RKGQKPNSTIYHILLHGYATKG 357

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
            L D   LL+ ++  G+      + I+                  EM + G  PD+
Sbjct: 358 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 413



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 173/358 (48%), Gaps = 39/358 (10%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
           F +    GL  +++S   L+  L   G+++ VE +  EM  R I  +    N +++ LCK
Sbjct: 436 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 495

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++ +A D  + +  +GV P VV+YN LIDGYC    +GKM ++   F  MV  G+ P+
Sbjct: 496 EGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC---FVGKMDESIKQFDRMVSIGLRPD 552

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGS--------------HGI-AAGVV-------- 295
             T+N L++G+ K+  +  A+ ++ EM                HG+  AG +        
Sbjct: 553 SWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612

Query: 296 ------------TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
                       TYN+++ GLC +  +DEA+ + +++ +   + +V T N +IN   K  
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672

Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
            +++A+ LF  +  +G  P VITY+ +I +  +EG +E++  +  SM   G   D    N
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLN 732

Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
            +I  L  +G+V      + ++          T  +L+  +  + K +K V  L E +
Sbjct: 733 VIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI-PIVSEKKYQKEVKFLPEKY 789


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 248/524 (47%), Gaps = 38/524 (7%)

Query: 24  LKNTDPNTVI--LQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPK 81
           LK+     VI  L LF+    P L   +F W+     + HSL  + +++  L   K +  
Sbjct: 39  LKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKT 98

Query: 82  IRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKR 141
               L    +    +S   +   +   S+     S +   LM+ Y K    +     F++
Sbjct: 99  AHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQ 158

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
               GLK  + +C  LL +LVK+   + V  ++K+M +  +  N+  +N +++   K+G 
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GI--------- 237
             KA  ++ +M+  GV P + TYN LI  YCKK                G+         
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278

Query: 238 --------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
                   G+M +A  +F++ +++ +  N VT+ TLIDG+C+  +I  A+++ E M S G
Sbjct: 279 FIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            + GVVTYNS++  LC DG++ EA  L  EM    ++P+ +T N LIN +CK + +  A 
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            +   + E GL   + +Y  LI  +CK   +E+A     SM+++G  P  +TY+ L+ G 
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
             +   + +  ++ E    G+ A +  Y  L+  +CK  +   A  L +    MEK+   
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFES---MEKKGLV 514

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
            + V +  +   + + GK+ +A+ L + +  + L+ N   Y+ +
Sbjct: 515 GDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 158/320 (49%), Gaps = 7/320 (2%)

Query: 131 KPHLGFEAFK---RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
           K  + FEA     R    G+  ++++ N  +    +EG+  +   +++E+K   +  N  
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHV 308

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           ++  +++G C+   +++A  + E M+S G SP VVTYN ++   C+ G   ++ +A+ + 
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG---RIREANRLL 365

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
            +M    I P+ +T NTLI+ +CK E++ +A+KV ++M   G+   + +Y +LI+G C  
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
            +L+ A      M+  G  P   T + L++GF  +   ++   L ++  ++GL   V  Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
             LI   CK  +++ A  +  SM  +G++ D   +  +     R G V     + + + N
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYN 545

Query: 428 NGMRAGLVTYNILVGALCKD 447
             +   L  Y  +  +   D
Sbjct: 546 RRLMVNLKLYKSISASYAGD 565



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 135/283 (47%), Gaps = 22/283 (7%)

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD------------------GKLDE 312
           K ++   A ++ +++    + +  +   SL+ G+  D                  G +++
Sbjct: 92  KHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIND 151

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           ++ + +++ + GLKP++     L+N   K++L +    +F  + + G+  ++  YN L+ 
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
           A  K G  E A  + + M ++GV PD+ TYN LI+   ++       ++ + +  +G+  
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP 271

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
            +VTYN  +    ++G+ ++A  L  E+    K+    N VTY  LI G+C+   +++A 
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFREI----KDDVTANHVTYTTLIDGYCRMNDIDEAL 327

Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
            L   +  +G  P   TY  +  ++ E G I +    +  +SG
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 191/372 (51%), Gaps = 12/372 (3%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
            + A   G    V + N L+    + G+ +    +   M    +  +  ++  ++ GLC 
Sbjct: 97  LRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCD 153

Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
            G++  A  +++DM   G  P VVTY +L++  CK  G G+   A  V  +M   G  PN
Sbjct: 154 RGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE---AMNVLDEMRAKGCTPN 210

Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
            VT+N +I+G C++  +  A ++   + S+G    +V+Y +++ GLC   + D+   L  
Sbjct: 211 IVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFA 270

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EM+     PN VT + L+  FC+  +VE+A  +   +S+ G +P+    N +I+A CK+G
Sbjct: 271 EMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQG 330

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           R++DA+   N+M   G  PD  +Y  ++ GL R G  E  + ++ E+V        VT+N
Sbjct: 331 RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
             +  LC+ G  ++A+ L++    M +      IVTYN L+ GFC +G+++ A  L N L
Sbjct: 391 TFICILCQKGLIEQAIKLIE---LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL 447

Query: 499 LEKGLIPNQTTY 510
             +   PN  TY
Sbjct: 448 PCE---PNTITY 456



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 213/419 (50%), Gaps = 38/419 (9%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E   R   YG +  ++S   +L+ L    +++DV+ ++ EM  ++   N  +F+ ++   
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
           C+ G + +A  +++ M   G +P     NI+I+  CK+G +                   
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
                        G+   A  +  +MV     PNEVTFNT I   C+   I  A+K+ E 
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  +G + G+VTYN+L++G CV G++D A+ L + +     +PN +T   L+ G C  + 
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTLLTGLCHAER 468

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           ++ A  L   + ++    + +T+N L+  +C++G +E+A  + N M++ G  P++ T+N 
Sbjct: 469 LDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 528

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G++++ N E    +++ LV+ G+    +TY+ +V  L ++ ++++A+ +L  +  M 
Sbjct: 529 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 588

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
                P +  YN ++   C++ + + A      ++  G +PN++TY I+ E +  +G +
Sbjct: 589 MR---PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 644



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
           ++  LC+ G+ + A+ ++   ++ G    V  YN L+ GYC+ G      + DA  + + 
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYG------RLDAARRLIA 133

Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
              + P+  T+  +I G C    +  A+ + ++M   G    VVTY  L+  +C      
Sbjct: 134 SMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFG 193

Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
           EA+ + DEM A G  PN+VT N +ING C++  V+ A+ + + +S  G  P +++Y T++
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253

Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
              C   R +D   +   M+D+  +P+  T++ L+    R G VE    ++ ++  +G  
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313

Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
                 NI++ A+CK G+   A   L+ M         P+ ++Y  +++G C+ G+ E A
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN---PDTISYTTVLRGLCRAGRWEHA 370

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             LL E++ K   PN+ T+      + +KG I
Sbjct: 371 KELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 189/396 (47%), Gaps = 11/396 (2%)

Query: 69  LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLA 125
           L   +V  K  P   +F   +  F + G       +   +S        N+ + ++++ A
Sbjct: 268 LFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS--QHGCTPNTTLCNIVINA 325

Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
             K  +    ++     G YG     +S   +LR L + G++E  + +  EM R+    N
Sbjct: 326 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 385

Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
             +FN  +  LC+ G + +A  ++E M   G S  +VTYN L+ G+C +G      + D+
Sbjct: 386 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG------RVDS 439

Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
             +        PN +T+ TL+ G C  E + AA ++   M         VT+N L++  C
Sbjct: 440 ALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFC 499

Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
             G ++EA+ L ++MM  G  PN++T N L++G  K    E+A  L   +  +G+S   I
Sbjct: 500 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 559

Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
           TY++++D   +E R E+A  M +++ D G+ P V  YN ++  L +    +   +    +
Sbjct: 560 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 619

Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           V+NG      TY IL+  L  +G  K+A  +L E++
Sbjct: 620 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 655



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 140/280 (50%), Gaps = 6/280 (2%)

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
           G  P+      LI   C+    S A +V     + G    V  YN+L+ G C  G+LD A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
              R  + +  + P+  T   +I G C +  V  A  L DD+ ++G  PSV+TY  L++A
Sbjct: 129 ---RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CK     +A  + + M  +G  P++ TYN +I G+ REG V+  + I+N L + G +  
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           +V+Y  ++  LC   +      L  EM     +K  PN VT+++L++ FC+ G +E A  
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVD---KKCVPNEVTFDMLVRFFCRGGMVERAIQ 302

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNI 533
           +L ++ + G  PN T   IV   + ++G + D    + N+
Sbjct: 303 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 6/251 (2%)

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           ++++ A ++ E   S G A  V     LI  LC  G+  +A  +     ASG   +V   
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+ G+C+   ++ AR L   I+   + P   TY  +I   C  GR+ DA A+ + ML 
Sbjct: 113 NTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           RG  P V TY  L+  + +        N+++E+   G    +VTYN+++  +C++G+   
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
           A  +L+   ++      P+IV+Y  ++KG C   + +D   L  E+++K  +PN+ T+ +
Sbjct: 230 AKEILN---RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286

Query: 513 VREEMMEKGFI 523
           +       G +
Sbjct: 287 LVRFFCRGGMV 297



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 133/253 (52%), Gaps = 6/253 (2%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +YG    +++ N L+     +G+ +    ++  +     E N  ++  +L GLC A +L+
Sbjct: 414 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLD 470

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
            A++++  M         VT+N+L+  +C+KG + +   A  +   M+E+G  PN +TFN
Sbjct: 471 AAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE---AMELVNQMMEHGCTPNLITFN 527

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           TL+DG  KD N   A+++   + S G++   +TY+S+++ L  + + +EA+ +   +   
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G++P V   N ++   CK+   ++A   F  +   G  P+  TY  LI+    EG +++A
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647

Query: 384 FAMRNSMLDRGVL 396
             + + +  +GVL
Sbjct: 648 RYVLSELYAKGVL 660



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 7/185 (3%)

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           +  L E AR L +  S +G +P V     LI   C+ GR  DA  +  +    G   DV 
Sbjct: 52  RDDLAEAAR-LVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVF 110

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            YN L+AG  R G ++  R ++  +    +     TY  ++  LC  G+   A++LLD+M
Sbjct: 111 AYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167

Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
            +   +   P++VTY VL++  C+     +A  +L+E+  KG  PN  TY ++   M  +
Sbjct: 168 LQRGCQ---PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 521 GFIPD 525
           G + D
Sbjct: 225 GRVDD 229


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 193/353 (54%), Gaps = 6/353 (1%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+ A ++ G   D    ++  K+ +I +  D+   VL  L +        D  +++   G
Sbjct: 72  LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
               +  +NIL+  +CK+G   +M  A +VF  + + G+ P+ V+FNTLI+G+ K  ++ 
Sbjct: 132 YPASLYFFNILMQRFCKEG---EMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD 188

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
              ++   M + G    V TY+ LINGLC +GKLDEA  L +EM+ +GL PN VT   LI
Sbjct: 189 EGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248

Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
           +G CK + V+ A  ++  +  QGLSP +ITYNTLI   CK+G ++    + + M+  G+ 
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308

Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
           PD  +Y  LI G  +EG++E    + N+++   +R   V Y  L+  LC++G++  A  +
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKM 368

Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           L EM  +  +   P+  TY ++I  FC+K   + A+ LL E+   G +P   T
Sbjct: 369 LREMLSVGLK---PDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 205/408 (50%), Gaps = 32/408 (7%)

Query: 61  HSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID 120
           H+L     ++H L   +   + +S + + V      S S +F A+     +   +  +  
Sbjct: 11  HTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFS 70

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
            LM+AY+++       + F+    + ++    +C ++L  L++   F+ V   YKE+   
Sbjct: 71  GLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLEC 130

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--- 237
               +L  FN ++   CK G++  A  + + +   G+ P VV++N LI+GY K G +   
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 238 -----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                                        GK+ +A+ +F +M++NG++PN VTF TLI G
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            CK+E +  AM+++++M S G++  ++TYN+LI GLC  G+L +   L DEM+ +GLKP+
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
            ++   LI+G CK+  +E A  L + + ++ +    + Y  LI   C+EGR  DA  M  
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLR 370

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            ML  G+ PD  TY  +I    ++ + +    ++ E+  +G   G+VT
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 163/274 (59%), Gaps = 3/274 (1%)

Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
           +K+++E G   +   FN L+  FCK+  +  A  VF+ +   G+   VV++N+LING   
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
            G LDE   L+  M ASG +P+V T + LING CK+  +++A  LF+++ + GL P+ +T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           + TLI  +CK  +++ A  +   ML +G+ PD+ TYN LI GL ++G ++ V ++++E++
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
            NG++   ++Y  L+   CK+G  + A+ L +   KM +E    + V Y  LI   C++G
Sbjct: 304 MNGLKPDKISYTTLIDGSCKEGDLEIALELRN---KMIQESIRLDDVAYTALISCLCREG 360

Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
           +  DA  +L E+L  GL P+  TY ++  E  +K
Sbjct: 361 RASDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 135/249 (54%), Gaps = 3/249 (1%)

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           F+ L+  + +   +  A++ F     H I     T   ++  L              E++
Sbjct: 69  FSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVL 128

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G   ++   N L+  FCK+  +  A+ +FD I++ GL PSV+++NTLI+ Y K G ++
Sbjct: 129 ECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD 188

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           + F ++++M   G  PDV TY+ LI GL +EG ++    + NE+++NG+    VT+  L+
Sbjct: 189 EGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              CK+ K   A+ +  +M     +   P+++TYN LI G C+KG+L+  + L++E++  
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLS---QGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305

Query: 502 GLIPNQTTY 510
           GL P++ +Y
Sbjct: 306 GLKPDKISY 314



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 136/246 (55%), Gaps = 3/246 (1%)

Query: 282 FEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCK 341
           ++E+   G  A +  +N L+   C +G++  A ++ D +   GL+P+VV+ N LING+ K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +++   L   +   G  P V TY+ LI+  CKEG++++A  + N MLD G++P+  T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
           +  LI G  +   V+    I  ++++ G+   L+TYN L+  LCK G+ K+   L+DEM 
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303

Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            M   K  P+ ++Y  LI G C++G LE A  L N+++++ +  +   Y  +   +  +G
Sbjct: 304 -MNGLK--PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREG 360

Query: 522 FIPDIE 527
              D E
Sbjct: 361 RASDAE 366


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 7/378 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V++ N LL A  K   +     +   M+      N  ++N +++G+C  G ++ A
Sbjct: 37  GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            +++ ++ S G  P  V YN ++ G C     G    AD +  +M+     PNE TFN +
Sbjct: 97  LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD---ADELVTEMLRENCPPNEATFNVV 153

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I   C+   +  A+++ E+M  HG  A +VTYN++INGLC    +D A+ L  +M + G 
Sbjct: 154 IYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 213

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KP++VT N L+ G C       A  L D++++ G  P  +T+NTLI   C++G M DA  
Sbjct: 214 KPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 273

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M D+G  P+  TY+ +I+GL++   ++    + NE+ + G     + Y +L   L 
Sbjct: 274 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLN 332

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
            D   ++A+     + K++     P+ V YN ++ G C+ GK E A  ++  ++  G +P
Sbjct: 333 DDDTIEEAIQ---TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP 389

Query: 506 NQTTYQIVREEMMEKGFI 523
           +  TY I+ E +  +G++
Sbjct: 390 DDLTYVILIEGLAYEGYL 407



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 184/336 (54%), Gaps = 11/336 (3%)

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           ++ N  ++N +++ LC+ G++  A  +++DM   G +P VVTYNIL++  CK    G+ Y
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK----GRGY 58

Query: 242 KADAVFKDMVE-NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
           +      D++   G  PN VT+N L+DG C + ++  A+++   + SHG     V YN++
Sbjct: 59  RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 118

Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
           + GLC   +  +A  L  EM+     PN  T N +I   C+K L+++A  L + +S+ G 
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178

Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
           + +++TYN +I+  C++  ++ A  + + M   G  PD+ TYN L+ GL           
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLI 479
           +M+ +  NG     VT+N L+G LC+ G    A+    E+FK   +K   PN +TY+ +I
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI----EVFKQMPDKGCTPNSITYSTII 294

Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
            G  +  KL+ A  L NE+  KG  P++  YQ++ E
Sbjct: 295 SGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAE 329



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 211/426 (49%), Gaps = 17/426 (3%)

Query: 85  FLHMFVKNGKFTSVSTIFHALSTCSDSLCR----NSIIIDMLMLAYVKNMKPHLGFEAFK 140
            +H   + G+      +  ALS   D LCR    + +  ++L+ A  K        E   
Sbjct: 13  LIHTLCERGQ------VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID 66

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
                G   + ++ N L+  +  EG  +D   + + +     + +  ++N VL GLC A 
Sbjct: 67  LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAE 126

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +   A +++ +M      P   T+N++I   C+K   G + +A  + + M ++G   N V
Sbjct: 127 RWGDADELVTEMLRENCPPNEATFNVVIYSLCRK---GLLQQAIQLLEKMSKHGCTANIV 183

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           T+N +I+G C+  N+  AM +  +M S+G    +VTYN+L+ GLC   +  +A  L D M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
             +G  P+ VT N LI   C+K L+  A  +F  + ++G +P+ ITY+T+I    K  ++
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + A  + N M  +G  PD   Y  L   L+ +  +E     + +L ++G+    V YN +
Sbjct: 304 DQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +  LC++GK++ A+   D M  M      P+ +TY +LI+G   +G L +A  LL +L  
Sbjct: 363 LLGLCRNGKTEFAI---DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 419

Query: 501 KGLIPN 506
           + ++ N
Sbjct: 420 RDVLVN 425



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 129/245 (52%), Gaps = 3/245 (1%)

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           +     TYN LI+ LC  G++ +A+++ D+M+  G  P+VVT N L+   CK +   +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L D +  +G +P+ +TYN L+D  C EG ++DA  +  ++   G  P    YN ++ GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
                      ++ E++         T+N+++ +LC+ G  ++A+ LL+   KM K    
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLE---KMSKHGCT 179

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGH 529
            NIVTYN +I G C++  ++ A GLL+++   G  P+  TY  + + +       D E  
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239

Query: 530 MYNIS 534
           M N++
Sbjct: 240 MDNMT 244


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 58/476 (12%)

Query: 60  SHSLLLTGRLLHSLVVAKKYPKIR----SFLHMFVKNGKFTSV-STIFHALSTCSDSLCR 114
           +  L L   ++H L  AK YP  R      +   +++     V S +F+ALS    S   
Sbjct: 59  TKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGSKF- 117

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  +  +L++A+                      S V   ++ LR  +K G F  V+   
Sbjct: 118 NPSVFGVLIIAF----------------------SEVGLVDEALRVYLKVGAFPAVQ--- 152

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
                        + N +LNGL K    +   ++  +M S  + P VVTYN+L+D  C++
Sbjct: 153 -------------ACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQ 199

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G +    +A ++  +MV+ GI P  V + TLI G C +  +  A  +F +M   G+   +
Sbjct: 200 GDV---LRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNL 256

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TYN L++G C    + +A+ L   M+  GL+PNVVT   LI+  CK + +  AR  F  
Sbjct: 257 YTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQ 316

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
           +++ G+ P+V+ +N+LID Y K G   +A  +   M    + PDV TY+ LI    R G 
Sbjct: 317 MAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGT 376

Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK-------MEKEK 467
           VE   +I+  +   G+ A  V YN L+   CK+G  +KA+    E+FK       M +  
Sbjct: 377 VEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKAL----EIFKATKFFSDMRRNG 432

Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
             P+ + Y V+++G      + D   L  ++++ G++PN+ T Q+VR    + G++
Sbjct: 433 LRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYL 488



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 137/280 (48%), Gaps = 11/280 (3%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + +H      K     ++F  +      +  N    ++LM  Y K          ++   
Sbjct: 226 TLIHGLCSESKLMEAESMFRQMK--DSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGML 283

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           D GL+ +V++   L+ AL K  +       + +M +  +  N+  FN +++G  KAG  +
Sbjct: 284 DDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCS 343

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A+D++ +M+   +SP V TY+ILI   C+   +G + +AD + K M + G+  N V +N
Sbjct: 344 EATDLLLEMEKFKISPDVFTYSILIKNACR---LGTVEEADDILKRMEKEGVPANSVVYN 400

Query: 264 TLIDGFCKDENISAAMKVFE------EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
           +LIDG+CK+ N+  A+++F+      +M  +G+    + Y  ++ G      + + + L 
Sbjct: 401 SLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLH 460

Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +M+  G+ PN VTS  +  G+     ++ A     D++E
Sbjct: 461 ADMIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTE 500


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 221/460 (48%), Gaps = 49/460 (10%)

Query: 95  FTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVLS 153
           F S+  + H +          + I+  +  AY K   P    + F R  G++  K +V S
Sbjct: 77  FRSLEEVLHQMKRERRVFLEKNFIV--MFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKS 134

Query: 154 CNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
            N +L  +V+EG F      Y  +   K   I  N  +FN V+  +C+ G ++KA ++  
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           ++     +P   TY+ L+ G CK+  I    +A ++  +M   G  PN V FN LI   C
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERID---EAVSLLDEMQVEGTFPNLVAFNVLISALC 251

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K  ++  A K+ + M   G     VTYN+L++GLC+ GKL++AV+L ++M+++   PN V
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311

Query: 331 TSNALINGF-----------------------------------CKKKLVEKARVLFDDI 355
           T   LINGF                                   CK+    +A  L+ ++
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
             +G  P+ I Y+ LID  C+EG++++A    + M ++G LP+  TY+ L+ G    G+ 
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
                +  E+ NN      V Y+IL+  LCKDGK  +A+ +  +M     +    ++V Y
Sbjct: 432 HKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKL---DVVAY 488

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLI--PNQTTYQIV 513
           + +I GFC    +E    L N++L +G +  P+  TY I+
Sbjct: 489 SSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNIL 528



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 192/384 (50%), Gaps = 12/384 (3%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   ++++ N L+ AL K+G       +   M  +    N  ++N +++GLC  GKL KA
Sbjct: 235 GTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKA 294

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++  M S    P  VT+  LI+G+  +   G+      V   +   G   NE  +++L
Sbjct: 295 VSLLNQMVSNKCVPNDVTFGTLINGFVMQ---GRASDGTRVLVSLEARGHRGNEYVYSSL 351

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G CK+   + AM++++EM   G     + Y++LI+GLC +GKLDEA     EM   G 
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            PN  T ++L+ G+ +     KA +++ +++      + + Y+ LI+  CK+G+  +A  
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG--MRAGLVTYNILVGA 443
           +   ML RG+  DV  Y+ +I G      VE    + N+++  G  ++  ++TYNIL+ A
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNA 531

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK-GKLEDANGLLNELLEKG 502
            C      +A+ +L+ M     +   P+ +T ++ +K   +     +D    L+EL+ + 
Sbjct: 532 FCIQKSIFRAIDILNIMLDQGCD---PDFITCDIFLKTLRENMNPPQDGREFLDELVVR- 587

Query: 503 LIPNQTTYQIVR--EEMMEKGFIP 524
           L+  Q T    +  E MM K  +P
Sbjct: 588 LVKRQRTIGASKIIEVMMHKFLLP 611



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 158/303 (52%), Gaps = 19/303 (6%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + L+  L KEGKF     ++KEM  +    N   ++ +++GLC+ GKL++A   + +MK+
Sbjct: 349 SSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKN 408

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
            G  P   TY+ L+ GY +    G  +KA  V+K+M  N  + NEV ++ LI+G CKD  
Sbjct: 409 KGYLPNSFTYSSLMRGYFEA---GDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGK 465

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTS 332
              A+ V+++M S GI   VV Y+S+I+G C    +++ + L ++M+  G  ++P+V+T 
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           N L+N FC +K + +A  + + + +QG  P  IT     D + K  R      M      
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT----CDIFLKTLREN----MNPPQDG 577

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
           R  L +      L+  L +     G   I+  +++  +     T+ ++V  +CK    +K
Sbjct: 578 REFLDE------LVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRK 631

Query: 453 AVS 455
           A+S
Sbjct: 632 AIS 634



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 55/406 (13%)

Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
           F++  + G Y L    LS   L+ +      F  +E V  +MKR R      +F  +   
Sbjct: 48  FKSGTQMGSYKLGD--LSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
             KA    KA D+   M                +  CK+     +   ++V   +V+ G+
Sbjct: 106 YGKAHLPEKAVDLFHRMWG--------------EFQCKQ----TVKSFNSVLNVIVQEGL 147

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
                 FN  ++ +    N   A K      S  I    +T+N +I  +C  G +D+A+ 
Sbjct: 148 ------FNRALEFY----NHVVASK------SLNIHPNALTFNLVIKAMCRLGLVDKAIE 191

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  E+      P+  T + L++G CK++ +++A  L D++  +G  P+++ +N LI A C
Sbjct: 192 VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALC 251

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           K+G +  A  + ++M  +G +P+  TYN L+ GL  +G +E   +++N++V+N      V
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T+  L+      G++     +L     +E      N   Y+ LI G C++GK   A  L 
Sbjct: 312 TFGTLINGFVMQGRASDGTRVL---VSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELW 368

Query: 496 NELLEKGLIPNQTTYQ-----IVRE-----------EMMEKGFIPD 525
            E++ KG  PN   Y      + RE           EM  KG++P+
Sbjct: 369 KEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPN 414


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 195/405 (48%), Gaps = 43/405 (10%)

Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
           Y     V++CN LL  LVK  +  D   VY EM  R   ++  S   ++ G+C  GK+  
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEV 223

Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
              ++E     G  P +V YN +I GYCK G I   Y    VFK++   G +P   TF T
Sbjct: 224 GRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY---LVFKELKLKGFMPTLETFGT 280

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAG------------------------------- 293
           +I+GFCK+ +  A+ ++  E+   G+                                  
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340

Query: 294 ----VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
               V TYN LIN LC +GK + AV   DE    GL PN ++   LI  +CK K  + A 
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            L   ++E+G  P ++TY  LI      G M+DA  M+  ++DRGV PD + YN L++GL
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G     + + +E+++  +      Y  L+    + G   +A     ++F +  EK  
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA----RKVFSLSVEKGV 516

Query: 470 P-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             ++V +N +IKGFC+ G L++A   +N + E+ L+P++ TY  +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 209/462 (45%), Gaps = 43/462 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S L + VK+ +      ++  +    DS+   S  I  L+       K  +G +  +   
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI--LVKGMCNEGKVEVGRKLIEGRW 232

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             G   +++  N ++    K G  E+   V+KE+K +     L++F  ++NG CK G   
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292

Query: 204 KASDIMEDMKSLGV-----------------------------------SPKVVTYNILI 228
            +  ++ ++K  G+                                    P V TYNILI
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           +  CK+G   K   A     +  + G++PN +++  LI  +CK +    A K+  +M   
Sbjct: 353 NRLCKEG---KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G    +VTY  LI+GL V G +D+AV ++ +++  G+ P+    N L++G CK      A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           ++LF ++ ++ + P    Y TLID + + G  ++A  + +  +++GV  DV  +N +I G
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             R G ++     MN +    +     TY+ ++    K      A+ +      MEK K 
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR---YMEKNKC 586

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            PN+VTY  LI GFC +G  + A     E+  + L+PN  TY
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 198/418 (47%), Gaps = 19/418 (4%)

Query: 108 CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKF 167
           C   +   +I+I+ L     K  K  +       A   GL  + LS   L++A  K  ++
Sbjct: 341 CKPDVATYNILINRL----CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEY 396

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
           +    +  +M  R  + ++ ++  +++GL  +G ++ A ++   +   GVSP    YN+L
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456

Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
           + G CK    G+   A  +F +M++  ILP+   + TLIDGF +  +   A KVF     
Sbjct: 457 MSGLCK---TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513

Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
            G+   VV +N++I G C  G LDEA+A  + M    L P+  T + +I+G+ K++ +  
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
           A  +F  + +    P+V+TY +LI+ +C +G  + A      M  R ++P+V TY  LI 
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633

Query: 408 GLSREGN-VEGVRNIMNELVNNGMRAGLVTYNILVGALCK----------DGKSKKAVSL 456
            L++E + +E        ++ N      VT+N L+    K          DG +    SL
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693

Query: 457 LDEMFKMEKEKKWPN-IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
             E F   K   W +    YN  +   C  G ++ A    +++++KG  P+  ++  +
Sbjct: 694 FSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 183/377 (48%), Gaps = 40/377 (10%)

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
           S+  +C+  L+ L +   F ++E V   ++   ++L  ++ + VL+   ++G L+KA +I
Sbjct: 97  SNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEI 156

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
                          Y+ +++ Y            D+V          P+ +  N+L+  
Sbjct: 157 ---------------YDYVVELY------------DSV----------PDVIACNSLLSL 179

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
             K   +  A KV++EM   G +    +   L+ G+C +GK++    L +     G  PN
Sbjct: 180 LVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPN 239

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
           +V  N +I G+CK   +E A ++F ++  +G  P++ T+ T+I+ +CKEG    +  + +
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLS 299

Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
            + +RG+   V   N +I    R G        +  ++ N  +  + TYNIL+  LCK+G
Sbjct: 300 EVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359

Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
           K + AV  LDE     K+   PN ++Y  LI+ +C+  + + A+ LL ++ E+G  P+  
Sbjct: 360 KKEVAVGFLDE---ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416

Query: 509 TYQIVREEMMEKGFIPD 525
           TY I+   ++  G + D
Sbjct: 417 TYGILIHGLVVSGHMDD 433



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 24/283 (8%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L+   ++ G F++   V+     + +++++   N ++ G C++G L++A   M  M    
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
           + P   TY+ +IDGY K+     M  A  +F+ M +N   PN VT+ +LI+GFC   +  
Sbjct: 551 LVPDKFTYSTIIDGYVKQQ---DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607

Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-LDEAVALRDEMMASGLKPNVVTSNAL 335
            A + F+EM    +   VVTY +LI  L  +   L++AV   + MM +   PN VT N L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667

Query: 336 INGFCKKKLVEKARVL-----------------FDDISEQGLSPSVITYNTLIDAYCKEG 378
           + GF KK      +VL                 F  +   G S     YN+ +   C  G
Sbjct: 668 LQGFVKKT---SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHG 724

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
            ++ A   ++ M+ +G  PD  ++  ++ G    GN +  RN+
Sbjct: 725 MVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 126/255 (49%), Gaps = 18/255 (7%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           + ++   VK+        +++ M++ + + N+ ++  ++NG C  G    A +  ++M+ 
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             + P VVTY  LI    K+     + KA   ++ M+ N  +PNEVTFN L+ GF K  +
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESST--LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676

Query: 275 --------------ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
                          S   + F  M S G +     YNS +  LCV G +  A   +D+M
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVL-FDDISEQGLSPSVITYNTLIDAYCKEGR 379
           +  G  P+ V+  A+++GFC     ++ R + F ++ E+GL  +V  Y+ +++ +  +  
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAV-RYSQVLEQHLPQPV 795

Query: 380 MEDAFAMRNSMLDRG 394
           + +A  + ++M+++ 
Sbjct: 796 ICEASTILHAMVEKA 810


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 203/381 (53%), Gaps = 22/381 (5%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           + F+  K     G      + ++++  L +  K E    +++EMK   +  ++ ++  ++
Sbjct: 271 MAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILI 330

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +  CKAG + +A    ++M+S+G S  VVTY  L+  Y K     ++ +A  +F  M++ 
Sbjct: 331 DSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA---KQLPQASDIFNRMIDA 387

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEM--------------GSH--GIAAGVVTY 297
           G  PN +T++ L+DG CK   I  A +V+ ++              G H   IA  VVTY
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
            +LI+GLC   K+ +A  L D M+++G +PN +  +ALI+GFCK   ++ A+ +F  +S+
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
            G  P+V TY +LIDA  K+ R++ A  + + M++    P+V TY  +I GL R G  + 
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              +++ +   G    +VTY  L+  L K GK   ++ L     +M  +   PN VTY V
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLF---IQMSTKGCAPNYVTYRV 624

Query: 478 LIKGFCQKGKLEDANGLLNEL 498
           LI   C  G L++A+ LL+E+
Sbjct: 625 LINHCCAAGLLDEAHSLLSEM 645



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 199/381 (52%), Gaps = 22/381 (5%)

Query: 159 RALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVS 218
           R L   GKF+    + K M  +    +  +++ V+  LC+A K+ KA  + ++MKS+GV+
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
           P V TY ILID +CK G I +   A + F +M   G   N VT+  L+  + K + +  A
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQ---ARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377

Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG-------------- 324
             +F  M   G     +TY++L++GLC  G++ +A  +  +++ +               
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHT 437

Query: 325 --LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
             + PNVVT  ALI+G CK   V  A+ L D +   G  P+ I Y+ LID +CK G++++
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDN 497

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A  +   M   G LP V TY  LI  + ++  ++    +++++V +     +VTY  ++ 
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            LC+ G+ +KA+ LL     ME++   PN+VTY  LI G  + GK++ +  L  ++  KG
Sbjct: 558 GLCRIGECQKALKLLS---MMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614

Query: 503 LIPNQTTYQIVREEMMEKGFI 523
             PN  TY+++       G +
Sbjct: 615 CAPNYVTYRVLINHCCAAGLL 635



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 191/406 (47%), Gaps = 20/406 (4%)

Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
           MK    F  F+     G+   V +   L+ +  K G  E     + EM+      N+ ++
Sbjct: 302 MKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361

Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------- 242
             +L+   KA +L +ASDI   M   G  P  +TY+ L+DG CK G I K  +       
Sbjct: 362 TALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIG 421

Query: 243 ------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
                 +D  F+    + I PN VT+  LIDG CK   +  A ++ + M S+G     + 
Sbjct: 422 TSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHII 481

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           Y++LI+G C  GK+D A  +   M   G  P V T  +LI+   K + ++ A  +   + 
Sbjct: 482 YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV 541

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E   +P+V+TY  +ID  C+ G  + A  + + M ++G  P+V TY  LI GL + G V+
Sbjct: 542 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601

Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT-Y 475
               +  ++   G     VTY +L+   C  G   +A SLL EM    K+  WP  +  Y
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM----KQTYWPKYLQGY 657

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             +++GF +  K   + GLL EL   G +P    Y ++ +   + G
Sbjct: 658 CSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAG 701



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 208/438 (47%), Gaps = 23/438 (5%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           F K G      + F  + +   S   N +    L+ AY+K  +     + F R  D G  
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCS--ANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCP 390

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEM----------------KRRRIELNLDSFNFV 192
            + ++ + L+  L K G+ +    VY ++                    I  N+ ++  +
Sbjct: 391 PNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGAL 450

Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
           ++GLCKA K+  A ++++ M S G  P  + Y+ LIDG+CK   +GK+  A  VF  M +
Sbjct: 451 IDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK---VGKIDNAQEVFLRMSK 507

Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
            G LP   T+ +LID   KD  +  AMKV  +M        VVTY ++I+GLC  G+  +
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567

Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
           A+ L   M   G  PNVVT  ALI+G  K   V+ +  LF  +S +G +P+ +TY  LI+
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627

Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
             C  G +++A ++ + M        +  Y  ++ G S++        ++ EL ++G   
Sbjct: 628 HCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEELESHGTVP 685

Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
               Y +L+    K G+ ++A+ L  EM ++       +   Y  LI+  C   +LE A 
Sbjct: 686 IAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAF 745

Query: 493 GLLNELLEKGLIPNQTTY 510
            L +E+  KG++P  + +
Sbjct: 746 ELYSEITRKGVVPELSVF 763



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 184/431 (42%), Gaps = 60/431 (13%)

Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
           +GF   K   + G      +     +AL KEG++ D   +   ++R   +L+      ++
Sbjct: 58  MGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQMI 114

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           +GL +A   ++A   +  M+     P VVTY  L+ G+ KK  +G   +   +   M++ 
Sbjct: 115 SGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKR---IINMMMKE 171

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING---------- 303
           G  PN   FN+L+  +C   +   A K+ + M   G   G V YN  I            
Sbjct: 172 GCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSP 231

Query: 304 -------------------------------LCVDGKLDEAVALRDEMMASGLKPNVVTS 332
                                          LC  GK D A  +   MM  G  P+  T 
Sbjct: 232 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTY 291

Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
           + +I   C+   VEKA +LF ++   G++P V TY  LID++CK G +E A +  + M  
Sbjct: 292 SKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 351

Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
            G   +V TY  L+    +   +    +I N +++ G     +TY+ LV  LCK G+ +K
Sbjct: 352 IGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQK 411

Query: 453 AVSLLDEM----------FKMEKEKK---WPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           A  +  ++          F  E +      PN+VTY  LI G C+  K+ DA  LL+ +L
Sbjct: 412 ACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAML 471

Query: 500 EKGLIPNQTTY 510
             G  PN   Y
Sbjct: 472 SNGCEPNHIIY 482



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 22/388 (5%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V++   LL   +K+ +    + +   M +     N   FN +++  C A     A  +++
Sbjct: 142 VVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLK 201

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGK---MYKADAVFKDMVENGILPNEVTFNTLID 267
            M   G  P  V YNI I   C    +     +  A+ V+++M+ +  + N+V       
Sbjct: 202 RMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFAR 261

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C       A ++ + M   G      TY+ +I  LC   K+++A  L  EM + G+ P
Sbjct: 262 CLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           +V T   LI+ FCK  L+E+AR  FD++   G S +V+TY  L+ AY K  ++  A  + 
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG-------------- 433
           N M+D G  P+  TY+ L+ GL + G ++    +  +L+      G              
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441

Query: 434 --LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
             +VTY  L+  LCK  K   A  LLD M     E   PN + Y+ LI GFC+ GK+++A
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCE---PNHIIYDALIDGFCKVGKIDNA 498

Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMME 519
             +   + + G +P   TY  + + M +
Sbjct: 499 QEVFLRMSKCGYLPTVHTYTSLIDAMFK 526



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 141/298 (47%), Gaps = 8/298 (2%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N II D L+  + K  K     E F R    G   +V +   L+ A+ K+ + +    V 
Sbjct: 478 NHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVL 537

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
            +M       N+ ++  +++GLC+ G+  KA  ++  M+  G SP VVTY  LIDG    
Sbjct: 538 SQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGL--- 594

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G  GK+  +  +F  M   G  PN VT+  LI+  C    +  A  +  EM        +
Sbjct: 595 GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYL 654

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
             Y S++ G     K   ++ L +E+ + G  P       LI+ F K   +E+A  L  +
Sbjct: 655 QGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKE 712

Query: 355 ISEQGLSPSVIT---YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           + E   S ++ +   Y +LI A C   ++E AF + + +  +GV+P++S + CLI GL
Sbjct: 713 MMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGL 770



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 137/356 (38%), Gaps = 50/356 (14%)

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
           ++K  G  P   TYN L+      G +   ++   V K+M E+G   ++ T        C
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFR---VQKEMSESGFCMDKFTVGCFAQALC 86

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+   S A+ + E           V    +I+GL      DEA++    M  +   PNVV
Sbjct: 87  KEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVV 143

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T   L+ GF KKK +   + + + + ++G +P+   +N+L+ +YC       A+ +   M
Sbjct: 144 TYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203

Query: 391 LDRGVLPDVSTYNCLIAG-----------------------------------------L 409
            D G  P    YN  I                                           L
Sbjct: 204 ADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCL 263

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G  +    I+  ++  G      TY+ ++  LC+  K +KA  L  EM  +      
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN--- 320

Query: 470 PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           P++ TY +LI  FC+ G +E A    +E+   G   N  TY  +    ++   +P 
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQ 376



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)

Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
           V + A +    ++     +     ++ + G  PS  TYN L+      G+M+  F ++  
Sbjct: 6   VAATAALRSSLRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKE 65

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M + G   D  T  C    L +EG       +M E  +  +   L T   ++  L +   
Sbjct: 66  MSESGFCMDKFTVGCFAQALCKEGRWSDAL-VMIEREDFKLDTVLCTQ--MISGLMEASL 122

Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
             +A+S L    +M      PN+VTY  L+ GF +K +L     ++N ++++G  PN + 
Sbjct: 123 FDEAISFLH---RMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSL 179

Query: 510 Y 510
           +
Sbjct: 180 F 180


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 199/374 (53%), Gaps = 11/374 (2%)

Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
           ++GD  L   V +C  L+    + G   +   V+  M R  +  N  ++  +++G    G
Sbjct: 30  KSGDAAL--DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRG 87

Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
           +      ++ +M+  GV P + TYN L+  +C+    G+   A  +F +M   G++ N V
Sbjct: 88  QREMGFALVGEMRRGGVEPNLYTYNCLVGEWCR---TGEFKSARLLFDEMPLKGVVRNVV 144

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
           ++N LI G C+   +  A ++FE M   GI   +VT+N LI+G    GK+  A+   ++M
Sbjct: 145 SYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQM 204

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
            A+GL+P+VVT N LI GFC+ + +  A   F D+ E+ L+P+ +TY  LI A+ KE  M
Sbjct: 205 KAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEM 264

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           + AF M + M   G+  DV +Y  L+  L  EG +   R +   + + G++   V Y+++
Sbjct: 265 DRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMM 324

Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
           +    ++G S KA+ L+ EM    K    PN+ +Y + I+  C +GK ++A  L+ ++ +
Sbjct: 325 IYGYGREGSSYKALRLIMEM---RKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMED 381

Query: 501 KGLIPNQTTYQIVR 514
            GL   QT+  I R
Sbjct: 382 AGL---QTSESICR 392



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 190/385 (49%), Gaps = 8/385 (2%)

Query: 47  LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
           +R  C +  E+R++ ++L  G    S   A       + +H   ++G       +F  + 
Sbjct: 9   VRRLC-AAAEVRSALAVLARG--TKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMP 65

Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
                +  N +    L+  Y    +  +GF         G++ ++ + N L+    + G+
Sbjct: 66  RLG--VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGE 123

Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
           F+    ++ EM  + +  N+ S+N ++ GLC+ GKL  A+ + E M+  G+ P +VT+N+
Sbjct: 124 FKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNL 183

Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
           LIDGY   G  GKM  A   F  M   G+ P+ VT+N LI GFC+  +I+ A++ F +M 
Sbjct: 184 LIDGY---GKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMK 240

Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
              +A   VTY  LI     + ++D A  +  EM  +GL+ +V +   L++  C +  + 
Sbjct: 241 ERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMM 300

Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
            AR LF  +  +G+ P+ + Y+ +I  Y +EG    A  +   M   G++P+V++Y   I
Sbjct: 301 HARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTI 360

Query: 407 AGLSREGNVEGVRNIMNELVNNGMR 431
             L  EG  +    ++ ++ + G++
Sbjct: 361 RLLCNEGKCQEAEALIGDMEDAGLQ 385



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 142/266 (53%), Gaps = 3/266 (1%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+  +V+S N L+  L + GK +D   +++ M+R  I  ++ +FN +++G  KAGK++ A
Sbjct: 138 GVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNA 197

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
                 MK+ G+ P VVTYN LI G+C+   I    +A   F DM E  + P +VT+  L
Sbjct: 198 LHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRA---FSDMKERRLAPTKVTYTIL 254

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I  F K+  +  A ++  EM   G+   V +Y  L++ LC++GK+  A  L   M + G+
Sbjct: 255 IGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGV 314

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           KPN V  + +I G+ ++    KA  L  ++ + GL P+V +Y   I   C EG+ ++A A
Sbjct: 315 KPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEA 374

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSR 411
           +   M D G+    S    L    +R
Sbjct: 375 LIGDMEDAGLQTSESICRVLFDAKAR 400



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 5/285 (1%)

Query: 89  FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
           + + G+F S   +F  +      + RN +  ++L+    ++ K     + F+     G+ 
Sbjct: 118 WCRTGEFKSARLLFDEMPL--KGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIH 175

Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
            S+++ N L+    K GK  +  + + +MK   ++ ++ ++N ++ G C+A  +  A   
Sbjct: 176 PSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRA 235

Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
             DMK   ++P  VTY ILI  + K+    +M +A  +  +M + G+  +  ++  L+  
Sbjct: 236 FSDMKERRLAPTKVTYTILIGAFAKE---NEMDRAFEMLSEMEKAGLEVDVQSYGVLLHA 292

Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
            C +  +  A K+F+ M S G+    V Y+ +I G   +G   +A+ L  EM  SGL PN
Sbjct: 293 LCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPN 352

Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           V +    I   C +   ++A  L  D+ + GL  S      L DA
Sbjct: 353 VASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDA 397



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 3/128 (2%)

Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
           DV+    L+ G  + G+V   R + + +   G+    VTY  L+      G+ +   +L+
Sbjct: 37  DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALV 96

Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM 517
            EM +   E   PN+ TYN L+  +C+ G+ + A  L +E+  KG++ N  +Y I+   +
Sbjct: 97  GEMRRGGVE---PNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGL 153

Query: 518 MEKGFIPD 525
              G + D
Sbjct: 154 CRHGKLKD 161


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 232/463 (50%), Gaps = 23/463 (4%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDML 122
           ++L  +L+H L  +K   K    +H+   +G                D +  N+II    
Sbjct: 92  VVLCTKLIHGLFTSKTIDKAIQVMHILENHGH--------------PDLIAYNAIIT--- 134

Query: 123 MLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
              + +  +    ++   R  + G    +++ N L+ +L   G  +       ++ +   
Sbjct: 135 --GFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENC 192

Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
           +  + ++  ++      G +++A  ++++M  + + P + TYN +I G C++G + + ++
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQ 252

Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
              +   +   G  P+ +T+N L+ G        A  ++  +M + G  A VVTY+ LI+
Sbjct: 253 ---IISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
            +C DGK++E V L  +M   GLKP+    + LI   CK+  V+ A  + D +   G  P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
            ++ YNT++   CK+ R ++A ++   + + G  P+ S+YN + + L   G+      ++
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429

Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
            E+++ G+    +TYN L+  LC+DG   +A+ LL +M +ME  +  P++V+YN+++ G 
Sbjct: 430 LEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM-EMESSECKPSVVSYNIVLLGL 488

Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           C+  ++ DA  +L  +++KG  PN+TTY  + E +   G + D
Sbjct: 489 CKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLND 531



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 175/317 (55%), Gaps = 7/317 (2%)

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           CKAG  N++   +  + + G  P VV    LI G      I K  +       ++EN   
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQV----MHILENHGH 123

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
           P+ + +N +I GFC+   I +A +V + M + G +  +VTYN LI  LC  G LD A+  
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
           +++++    KP VVT   LI     +  +++A  L D++ E  L P + TYN++I   C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
           EG ++ AF + +S+  +G  PDV TYN L+ GL  +G  E    +M+++V  G  A +VT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           Y++L+ ++C+DGK ++ V LL +   M+K+   P+   Y+ LI   C++G+++ A  +L+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKD---MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360

Query: 497 ELLEKGLIPNQTTYQIV 513
            ++  G +P+   Y  +
Sbjct: 361 VMISDGCVPDIVNYNTI 377



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 192/363 (52%), Gaps = 8/363 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           K +V++   L+ A + +G  ++   +  EM    ++ ++ ++N ++ G+C+ G +++A  
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQ 252

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           I+  + S G +P V+TYNIL+ G   +G     Y+   +  DMV  G   N VT++ LI 
Sbjct: 253 IISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE---LMSDMVARGCEANVVTYSVLIS 309

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
             C+D  +   + + ++M   G+      Y+ LI  LC +G++D A+ + D M++ G  P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
           ++V  N ++   CK+K  ++A  +F+ + E G SP+  +YN++  A    G    A  M 
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429

Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNV-EGVRNIMN-ELVNNGMRAGLVTYNILVGALC 445
             MLD+GV PD  TYN LI+ L R+G V E +  +++ E+ ++  +  +V+YNI++  LC
Sbjct: 430 LEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLC 489

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K  +   A+ +L  M     +   PN  TY  LI+G    G L DA  L   L+    I 
Sbjct: 490 KVSRVSDAIEVLAAMV---DKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAIS 546

Query: 506 NQT 508
             +
Sbjct: 547 EHS 549



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 167/320 (52%), Gaps = 10/320 (3%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           D    NSII  M    YV        F+        G    V++ N LLR L+ +GK+E 
Sbjct: 230 DMFTYNSIIRGMCREGYVDR-----AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
              +  +M  R  E N+ +++ +++ +C+ GK+ +   +++DMK  G+ P    Y+ LI 
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
             CK+   G++  A  V   M+ +G +P+ V +NT++   CK +    A+ +FE++G  G
Sbjct: 345 ALCKE---GRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
            +    +YNS+ + L   G    A+ +  EM+  G+ P+ +T N+LI+  C+  +V++A 
Sbjct: 402 CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAI 461

Query: 350 VLFDDISEQG--LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
            L  D+  +     PSV++YN ++   CK  R+ DA  +  +M+D+G  P+ +TY  LI 
Sbjct: 462 ELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIE 521

Query: 408 GLSREGNVEGVRNIMNELVN 427
           G+   G +   R++   LVN
Sbjct: 522 GIGFGGCLNDARDLATTLVN 541



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 152/286 (53%), Gaps = 5/286 (1%)

Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
           I  ++L+   +   K   G+E        G +++V++ + L+ ++ ++GK E+   + K+
Sbjct: 267 ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
           MK++ ++ +   ++ ++  LCK G+++ A ++++ M S G  P +V YN ++   CK+  
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ-- 384

Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
             +  +A ++F+ + E G  PN  ++N++        +   A+ +  EM   G+    +T
Sbjct: 385 -KRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGIT 443

Query: 297 YNSLINGLCVDGKLDEAVAL--RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
           YNSLI+ LC DG +DEA+ L    EM +S  KP+VV+ N ++ G CK   V  A  +   
Sbjct: 444 YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAA 503

Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           + ++G  P+  TY  LI+     G + DA  +  ++++   + + S
Sbjct: 504 MVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS 549


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 214/418 (51%), Gaps = 12/418 (2%)

Query: 96  TSVSTIFHALSTCSDSLC--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           T+   +  A ++C DS+     S+++D     Y K+ +     +       +G+K + L 
Sbjct: 125 TAADLLKQAATSCPDSVTPLSASVVVD----GYCKSGRVAHARQLLDEMPRHGVKVNALC 180

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            N LL A  +E   + V  + K M+   IE  + ++  +++GL  A  + K   + E+MK
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           S  +S  V  Y+ +I+ YC+ G +    +A  VF + V NGI PNE T+  LI+GFCK  
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNV---RRASEVFDECVGNGIEPNEHTYGALINGFCKIG 297

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            + AA  +  +M   G+    + +N++I+G C    +D+A+ ++  M   G++ +V T N
Sbjct: 298 QMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYN 357

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L  G  +   +++A+ L   + E+G+ P+ ++Y TLI  +C EG M +A  +   M   
Sbjct: 358 TLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 417

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P + TYN ++ G  ++G++       NE+   G+   + +Y  LV   C +GK   A
Sbjct: 418 GAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 477

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           + L +E   M++    PN+V Y  LI G  ++G+ E+A  L + +L  GL P+   Y 
Sbjct: 478 LRLFEE---MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 532



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 11/370 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           ++LC NS     L+ AY +        E  K   + G++ +V +   L+  L        
Sbjct: 177 NALCYNS-----LLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITK 231

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           VE V++EMK + +  ++  ++ V+N  C+AG + +AS++ ++    G+ P   TY  LI+
Sbjct: 232 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 291

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK   IG+M  A+ +  DM   G+  N++ FNT+IDG+C+   +  A+++   M   G
Sbjct: 292 GFCK---IGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG 348

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   V TYN+L  GL    ++DEA  L   M+  G++PN V+   LI+  C +  + +AR
Sbjct: 349 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 408

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF +++  G  PS++TYN ++D Y K+G + +A   +N M  +G++PD+ +Y  L+ G 
Sbjct: 409 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGH 468

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G V+    +  E+   G +  LV Y  L+  L K+G+S++A  L D M     +   
Sbjct: 469 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML---GDGLT 525

Query: 470 PNIVTYNVLI 479
           P+   Y+ L+
Sbjct: 526 PDDALYSALV 535



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 180/348 (51%), Gaps = 25/348 (7%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S + V++G CK+G++  A  ++++M   GV    + YN L+D Y ++    ++ +   + 
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE---ML 201

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M   GI P   T+  L+DG     +I+    VFEEM S  ++  V  Y+S+IN  C  
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +  A  + DE + +G++PN  T  ALINGFCK   +E A +L  D+  +G+  + I +
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT+ID YC++  ++ A  ++  M   G+  DV TYN L  GL R   ++  +N++  ++ 
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+R   V+Y  L+   C +G   +A  L  EM     E   P++VTYNV++ G+ +KG 
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE---PSLVTYNVMMDGYIKKGS 438

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           + +A    NE                   M +KG +PDI  +   + G
Sbjct: 439 IREAERFKNE-------------------MEKKGLVPDIYSYAALVHG 467



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 198/372 (53%), Gaps = 10/372 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS + ++    K G+      +  EM R  +++N   +N +L+   +    ++ +++++ 
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M++ G+ P V TY IL+DG      I K+   +AVF++M    +  +   ++++I+ +C+
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKV---EAVFEEMKSKNLSGDVYFYSSVINAYCR 260

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A +VF+E   +GI     TY +LING C  G+++ A  L  +M   G+  N + 
Sbjct: 261 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 320

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+G+C+K +V+KA  +   + + G+   V TYNTL     +  RM++A  +   M+
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++GV P+  +Y  LI+    EG++   R +  E+  NG    LVTYN+++    K G  +
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440

Query: 452 KAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +A     E FK E EKK   P+I +Y  L+ G C  GK++ A  L  E+ ++G  PN   
Sbjct: 441 EA-----ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495

Query: 510 YQIVREEMMEKG 521
           Y  +   + ++G
Sbjct: 496 YTALISGLAKEG 507



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 162/315 (51%), Gaps = 5/315 (1%)

Query: 95  FTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
            T V  +F  +   S +L  +      ++ AY +        E F      G++ +  + 
Sbjct: 229 ITKVEAVFEEMK--SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTY 286

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
             L+    K G+ E  E +  +M+ R + +N   FN +++G C+   ++KA +I   M+ 
Sbjct: 287 GALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEK 346

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+   V TYN L    C      +M +A  + + M+E G+ PN V++ TLI   C + +
Sbjct: 347 MGIELDVYTYNTLA---CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F EM  +G    +VTYN +++G    G + EA   ++EM   GL P++ +  A
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G C    V+ A  LF+++ ++G  P+++ Y  LI    KEGR E+AF + ++ML  G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523

Query: 395 VLPDVSTYNCLIAGL 409
           + PD + Y+ L+  L
Sbjct: 524 LTPDDALYSALVGSL 538


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 107/484 (22%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G + SV + N  L AL K    +     +++M+RR    +  +++ VL GLCKAG+L+KA
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGILPNEVTFNT 264
            +++  ++  GV   V+TY+++IDG CK     ++  A  +FK M    G +P+ VTFN+
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKA---SRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
           L+ G C  E +S A  +FE M   G    V++Y++L++GLC  G+LDEA  L +EM+   
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 325 LKPNVVTSNALINGFCK-----------KKLVEK-------------------------- 347
             P++V   + + G CK           +K+V K                          
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 348 ---------------ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA---FAMRNS 389
                          A   F+++  +   PS   +NTLI A CK  R+ D    F    S
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
           M +    P++ TYN ++  L +   ++  + ++NE+ N G+   +VTY+ LV  LCK GK
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 450 SKKAVSLLDEMFK--------------------------------MEKEKKWPNIVTYNV 477
             +A  LL+EM K                                M+     P++VTYN 
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKG 521
           L+ G C+ G++++A   L +++     P+  +Y I                + +EM+++G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 522 FIPD 525
            +PD
Sbjct: 510 VLPD 513



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 59/433 (13%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
            F  F+     G + +V+S + LL  L K G+ ++   +++EM  +    +L ++   + 
Sbjct: 163 AFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVT 222

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI--------------GKM 240
           GLCKA ++ +A D    M + G     V ++ +I   CKKG                G +
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGML 282

Query: 241 YKADAVFKDMVE------------------------NGIL--------------PNEVTF 262
            +A   F++M+                         +G+L              PN  T+
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342

Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
           N ++D  CK + +  A ++  EM ++G++  VVTY++L++GLC  GKLD A  L +EM  
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402

Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
            G+ P+  T  +++N   K   V+ A    + +  +G +P ++TYNTL+D  CK GR+++
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462

Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
           A      M+     PDV +Y  +I  L R G   G   I  E+V  G+    V Y+ L+ 
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522

Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
            L ++G    A+ LL            P+ V + +++ G C+ GK EDA  ++  + + G
Sbjct: 523 GLARNGLEDLALELLKTSLCK------PDFVMHKMVVDGLCKAGKAEDACEVVERMADAG 576

Query: 503 LIPNQTTY-QIVR 514
              +  TY  +VR
Sbjct: 577 FPADAFTYINVVR 589



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 168/308 (54%), Gaps = 9/308 (2%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRR---IELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           N L+ A+ K  +  D   +++ MK  +      NL+++N +++ LCKA +L++A +++ +
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M + G+SP VVTY+ L+DG CK   +GK+ +A  + ++M + G+ P+  T  ++++   K
Sbjct: 365 MANYGLSPDVVTYSALVDGLCK---LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
              +  A+   E M + G    +VTYN+L++GLC  G++DEA+    +M+A+   P+V +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
              +I   C+      A  +F ++ ++G+ P  + Y++L+D   + G  + A  +  + L
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
            +   PD   +  ++ GL + G  E    ++  + + G  A   TY  +V  L K GK  
Sbjct: 542 CK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVD 598

Query: 452 KAVSLLDE 459
           KA  L+D+
Sbjct: 599 KARQLVDD 606



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 52/319 (16%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST-----CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
           + +H   K+ +      +F  + +     C  +L   +I++D L     K  +     E 
Sbjct: 306 TLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL----CKAKQLDEAQEL 361

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFN--FVLNGL 196
                +YGL   V++ + L+  L K GK +    + +EM +  +    DSF    +LN L
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV--FPDSFTDASILNAL 419

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
            KAGK++ A   +E MK+ G +P +VTYN L+DG CK G I                   
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD--ENISAAMKVF 282
                        G+   A A+F++MV+ G+LP+ V +++L+DG  ++  E+++      
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA-----L 534

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           E + +       V +  +++GLC  GK ++A  + + M  +G   +  T   ++ G  K 
Sbjct: 535 ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594

Query: 343 KLVEKARVLFDDISEQGLS 361
             V+KAR L DD SE   S
Sbjct: 595 GKVDKARQLVDDASETHTS 613



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 351 LFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
           LFD +  Q G   SV TYN  +DA  K    + A+     M  RG  PD  TY+ ++ GL
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
            + G ++  + ++ +L  +G++  ++TY++++   CK  +   A+    E+FK       
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL----EIFKTMSAGGG 139

Query: 470 --PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-------------- 513
             P++VT+N L+KG C   ++ +A  L   + + G  PN  +Y  +              
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEAC 199

Query: 514 --REEMMEKGFIPDIEGHMYNISG 535
              EEM+EK  +PD+  +   ++G
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTG 223


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 243/497 (48%), Gaps = 72/497 (14%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALST---CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
           + ++  VK G       +F  +S     +D  C N     ML+  + K+     G E ++
Sbjct: 191 TLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYN-----MLIDGFFKHGDYDKGKEIWE 245

Query: 141 R-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
           R   D  +  +V++ N ++  L K G+F++   +++ M +   E ++ +++ +++GLC+A
Sbjct: 246 RLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEA 305

Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------- 237
           G ++ A  + +++    +    VT+N +++G+C+ G I                      
Sbjct: 306 GNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYN 365

Query: 238 ---------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
                    GK+ +A ++++ + + G  P   T+  LI G CK+  ++ A+K+F+E    
Sbjct: 366 ILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDG 425

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
                   Y+S+++GLC +G++DEA+++ ++M   G K +    N LINGF +   +E A
Sbjct: 426 PGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDA 485

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
              F ++  +G SP++++YNTLI   CK  R  +A++    ML++   PD+ T + L+ G
Sbjct: 486 INFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDG 545

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------- 460
           L +E  +E   N+  + ++ G +  +  YNIL+  LC   K + A+ L   M        
Sbjct: 546 LCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPN 605

Query: 461 -----------FKMEKEKK----W---------PNIVTYNVLIKGFCQKGKLEDANGLLN 496
                      +K+   +K    W         P+I++YN+ IKG C   ++ DA   LN
Sbjct: 606 LVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLN 665

Query: 497 ELLEKGLIPNQTTYQIV 513
           + L +G++P   T+ I+
Sbjct: 666 DALNRGILPTAVTWNIL 682



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 210/450 (46%), Gaps = 53/450 (11%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVL 193
             + F      G+ + V   N L+    K G ++  + +++ + K   +  N+ ++N ++
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264

Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
           NGLCK G+ +++ +I E M        + TY+ LI G C+ G I    +   V+K++VE+
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVR---VYKEIVES 321

Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
            ++ + VT N +++GFC+   I  + +++  MG       VV+YN LI GL  +GK++EA
Sbjct: 322 SLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEA 380

Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
           +++ + +   G +P   T   LI+G CK   + KA  +F +  +         Y++++D 
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
            CKEGRM++A ++ N M  RG   D    N LI G  R   +E   N   E+   G    
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPT 500

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKME----------------KEKK-------W- 469
           +V+YN L+  LCK  +  +A S + EM + E                +EKK       W 
Sbjct: 501 IVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQ 560

Query: 470 --------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEM---- 517
                   P+I  YN+L+ G C   KLEDA  L + +     +PN  T   + E +    
Sbjct: 561 QALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVR 620

Query: 518 ------------MEKGFIPDIEGHMYNISG 535
                       ++ G  PDI  +   I G
Sbjct: 621 DYEKASEIWDCILKDGLHPDIISYNITIKG 650



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 234/506 (46%), Gaps = 92/506 (18%)

Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD-YGLKSSVLSCNQLLRALVKEGKFEDVE 171
           C+  + + ++  AY KN   +   + F+   D +G K  V S N LL A V+  +++  E
Sbjct: 78  CKEDVALTVIK-AYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAE 136

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
              +  +   +  NL ++N ++   CK  ++ KA  +++ M S  + P V +Y  LI+G 
Sbjct: 137 SFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGM 196

Query: 232 CKKGGIGKMYKADAVFKDMVENGIL----------------------------------- 256
            K   +G +  A  VF +M   G++                                   
Sbjct: 197 VK---VGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSV 253

Query: 257 -PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            PN VT+N +I+G CK      +++++E M  +     + TY+SLI+GLC  G +D AV 
Sbjct: 254 YPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVR 313

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           +  E++ S L  + VT NA++NGFC+   ++++  L+  + ++    +V++YN LI    
Sbjct: 314 VYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLF 372

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           + G++E+A ++   +  +G  P+ +TY  LI GL + G +     I  E  +   +    
Sbjct: 373 ENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAY 432

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFK--------------------------------M 463
            Y+ +V  LCK+G+  +A+S++++M K                                M
Sbjct: 433 AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM 492

Query: 464 EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------- 512
           E +   P IV+YN LIKG C+  +  +A   + E+LEK   P+  T  +           
Sbjct: 493 ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKI 552

Query: 513 -----VREEMMEKGFIPDIEGHMYNI 533
                + ++ ++KGF PDI   MYNI
Sbjct: 553 EMALNLWQQALDKGFKPDIT--MYNI 576



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 198/398 (49%), Gaps = 9/398 (2%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H   + G       ++  +     SL  +++  + ++  + +  K    FE +   G
Sbjct: 297 SLIHGLCEAGNIDGAVRVYKEI--VESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMG 354

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
               ++ V+S N L++ L + GK E+   +++ + ++       ++  +++GLCK G+LN
Sbjct: 355 KENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLN 413

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           KA  I ++ +          Y+ ++DG CK+G   +M +A ++   M + G   +    N
Sbjct: 414 KALKIFKEAEDGPGKLDAYAYSSMVDGLCKEG---RMDEAISIVNQMDKRGYKLDPHVCN 470

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            LI+GF +   +  A+  F EM   G +  +V+YN+LI GLC   +  EA +   EM+  
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
             KP+++T + L++G C++K +E A  L+    ++G  P +  YN L+   C   ++EDA
Sbjct: 531 EWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDA 590

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
             + + M     +P++ T N L+ GL +  + E    I + ++ +G+   +++YNI +  
Sbjct: 591 LQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKG 650

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
           LC   +   A+  L++          P  VT+N+L++ 
Sbjct: 651 LCSCSRISDAIEFLNDAL---NRGILPTAVTWNILVRA 685



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 10/370 (2%)

Query: 155 NQLLRALVKEGKF-EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
           + +LR L  + +    V  +   +K ++     D    V+    K    NKA D  ++M+
Sbjct: 48  HHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQ 107

Query: 214 SL-GVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
            + G  P V +YN L++ + +     +       F+ M    + PN  T+N LI   CK 
Sbjct: 108 DIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM---DVSPNLQTYNILIKISCKK 164

Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
           + I  A+ + + M S  +   V +Y +LING+   G L  A+ + DEM   G+  +V   
Sbjct: 165 QQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCY 224

Query: 333 NALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
           N LI+GF K    +K + +++  + +  + P+V+TYN +I+  CK GR +++  +   M 
Sbjct: 225 NMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMT 284

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
                 D+ TY+ LI GL   GN++G   +  E+V + +    VT+N ++   C+ GK K
Sbjct: 285 KNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIK 344

Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
           ++     E++ +  ++    +V+YN+LIKG  + GK+E+A  +   L +KG  P  TTY 
Sbjct: 345 ESF----ELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYG 400

Query: 512 IVREEMMEKG 521
           ++   + + G
Sbjct: 401 VLIHGLCKNG 410


>gi|255574125|ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 621

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 37/402 (9%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    +L+ N L+  L   G  +  + + KEM       N  +FN  + G C    ++KA
Sbjct: 155 GFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKA 214

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---------------------------- 237
             +   M   GV P  VT NIL+   CK+G +                            
Sbjct: 215 LYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILM 274

Query: 238 ------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                 G M +A  ++  M +N  L + V +N LI GFC   N+  A     +M   G+ 
Sbjct: 275 DGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLL 334

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
             + TYN+LI+GLC  GKL EA  + D M+  G+ P+ ++   +I G C +  V KA   
Sbjct: 335 PDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEH 394

Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
              + E+ + P    +N +ID + + G   +AF++R+ ML  GV+P+V TYN LI    +
Sbjct: 395 LHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVK 454

Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
            GN+    ++   ++ +G+   ++TYN+L+G  C  G+   AV L  EM +   E   P+
Sbjct: 455 TGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHE---PD 511

Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           I+TY  LI+G C +G +++A  L  +L   GL  +   +Q++
Sbjct: 512 IITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLL 553



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 179/348 (51%), Gaps = 8/348 (2%)

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
           R ++++      ++  LC AGKL  A  +   +   G  P ++T+N L++G C  G    
Sbjct: 119 RSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSG---D 175

Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
           + KAD + K+M+E G  PN  TFNT I G+C   N+  A+ +F  M   G+    VT N 
Sbjct: 176 LQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNI 235

Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKP--NVVTSNALINGFCKKKLVEKARVLFDDISE 357
           L++ LC  G L++A  L  E++    K   N++TS  L++G  K   + +A  ++  +S+
Sbjct: 236 LVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQ 295

Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
                  + YN LI  +C    M+ A++    ML RG+LPD+ TYN LI+GL + G +  
Sbjct: 296 NNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYE 355

Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
              I + ++  G+    ++Y I++  LC  G   KA    + +  M ++   P    +N+
Sbjct: 356 ACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKAN---EHLHCMLEKSMVPEAHVWNL 412

Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
           +I GF + G   +A  + +++L  G++PN  TY  +    ++ G I D
Sbjct: 413 IIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVD 460



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 21/307 (6%)

Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
           GK+  A  + + ++  G +P+ +T N L++G C   ++  A  + +EM   G +    T+
Sbjct: 139 GKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATF 198

Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
           N+ I G C+   +D+A+ L   M  SG+KPN VT N L++  CK+ L+E A+ L  ++ +
Sbjct: 199 NTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLD 258

Query: 358 QGLSPSV--ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
                 V  IT   L+D   K G M  A  +  +M     L D   YN LI G     N+
Sbjct: 259 DNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNM 318

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTY 475
           +   +   +++  G+   + TYN L+  LCK GK  +A  + D M +M      P+ ++Y
Sbjct: 319 KLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVA---PDQISY 375

Query: 476 NVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMME 519
            ++I+G C +G +  AN  L+ +LEK ++P    + +                +R++M+ 
Sbjct: 376 KIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLS 435

Query: 520 KGFIPDI 526
            G +P++
Sbjct: 436 FGVVPNV 442



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 155/340 (45%), Gaps = 40/340 (11%)

Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM--KRRRIELNLDSFNFVLNGL 196
           F    D G+K + ++ N L+ AL K G  ED + +  E+     +  +NL +   +++G 
Sbjct: 218 FSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGC 277

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
            K G + +A  I   M         V YN+LI G+C    +   Y       DM++ G+L
Sbjct: 278 IKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSC---DMLKRGLL 334

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG---KLDE- 312
           P+  T+NTLI G CK   +  A  + + M   G+A   ++Y  +I GLC  G   K +E 
Sbjct: 335 PDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEH 394

Query: 313 -------------------------------AVALRDEMMASGLKPNVVTSNALINGFCK 341
                                          A ++RD+M++ G+ PNV T NALI+   K
Sbjct: 395 LHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVK 454

Query: 342 KKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST 401
              +  A  L   +   GL P VITYN LI   C  GR+  A  +   ML  G  PD+ T
Sbjct: 455 TGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIIT 514

Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           Y  LI GL   GN++  + +  +L N G+    V + +L+
Sbjct: 515 YTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLLI 554



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 23/288 (7%)

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
           +L+   C    + AA+ +  ++   G    ++T+N L+NGLC  G L +A  L  EM+  
Sbjct: 130 SLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEI 189

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           G  PN  T N  I G+C    V+KA  LF  +S+ G+ P+ +T N L+ A CK G +EDA
Sbjct: 190 GPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDA 249

Query: 384 FAMRNSMLDRGVLPDVS--TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
             +   +LD      V+  T   L+ G  + G++     I   +  N      V YN+L+
Sbjct: 250 KKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLI 309

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
              C     K A S   +M K       P+I TYN LI G C+ GKL +A  + + +L  
Sbjct: 310 HGFCLTRNMKLAYSYSCDMLK---RGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRM 366

Query: 502 GLIPNQTTYQIVREE----------------MMEKGFIPDIEGHMYNI 533
           G+ P+Q +Y+IV +                 M+EK  +P  E H++N+
Sbjct: 367 GVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVP--EAHVWNL 412



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
           + SL+  LC+ GKL  A+ LR +++  G  P+++T N L+NG C    ++KA  L  ++ 
Sbjct: 128 HASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEML 187

Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
           E G SP+  T+NT I  YC    ++ A  + +SM D GV P+  T N L+  L + G +E
Sbjct: 188 EIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLE 247

Query: 417 GVRNIMNELV--NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
             + ++ EL+  N   R  L+T  IL+    K+G   +A+ +    + M +     + V 
Sbjct: 248 DAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGI---WYAMSQNNTLMDSVA 304

Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
           YNVLI GFC                   L  N         +M+++G +PDI  +   IS
Sbjct: 305 YNVLIHGFC-------------------LTRNMKLAYSYSCDMLKRGLLPDIFTYNTLIS 345

Query: 535 G 535
           G
Sbjct: 346 G 346


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 226/474 (47%), Gaps = 32/474 (6%)

Query: 80  PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLAYVKNMKPHLGF 136
           PK   F++ F+ N     +++ F  +S+   +L   S+     D ++ A  ++       
Sbjct: 3   PKSIGFVYPFLSN----RITSYFFTISSTQRNLNSESVCGRPRDAVINASFQSQLLEQSL 58

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           ++FK     G   S  S N  L  L K G  +     + E    R + ++ SF   +   
Sbjct: 59  DSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGRTQFDVYSFGITIKAF 117

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
           C+ G ++K  +++  M+++GVSP V  Y ILI+  C+ G I    +A  +F  M + G+ 
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDID---QAKVMFSRMDDLGLA 174

Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
            N+  +  +I+GF K        +++++M   G+   + TYNSLI   C DGKL  A  +
Sbjct: 175 ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKV 234

Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
            DE+   G+  N VT N LI G C+K  V KA  L + +    ++P+  T+N L+D  C 
Sbjct: 235 FDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCN 294

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G+++ A +    +   G+ P + TYN LI+G S+ GN   V  ++ E+ + G+    VT
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVT 354

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLL 495
           Y IL+    +    +KA     EMF + K     P+  TY VLI G C KG + +A+ L 
Sbjct: 355 YTILMNTFVRSDDIEKAY----EMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLY 410

Query: 496 NELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDIEGHMYNI 533
             ++E  L PN   Y  +                 EEM++ G  P++  ++  I
Sbjct: 411 KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 195/384 (50%), Gaps = 6/384 (1%)

Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
           A+ +N     GFE   +    G+  +V     L+ A  + G  +  + ++  M    +  
Sbjct: 116 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 175

Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           N   +  ++NG  K G      ++ + MK +GV P + TYN LI  YC+ G +   +K  
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK-- 233

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            VF ++ + G+  N VT+N LI G C+   +S A  + E M    I     T+N L++GL
Sbjct: 234 -VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGL 292

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G+LD+A++  +++   GL P +VT N LI+GF K         L  ++ ++G+SPS 
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY  L++ + +   +E A+ M + M   G++PD  TY  LI GL  +GN+     +   
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKS 412

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +V   ++   V YN ++   CK+  S KA+  L+EM    K    PN+ +Y   I+  C+
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMV---KNGVTPNVASYISTIQILCK 469

Query: 485 KGKLEDANGLLNELLEKGLIPNQT 508
            GK  +A  LL E+ E GL P ++
Sbjct: 470 DGKSIEAKRLLKEMTEAGLKPPES 493



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 154/279 (55%), Gaps = 3/279 (1%)

Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
           L+  Y ++ K  L F+ F      G+  + ++ N L+  L ++G+    E + + MKR  
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH 277

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           I     +FN +++GLC  G+L+KA   +E +K +G+ P +VTYNILI G+ K   +G   
Sbjct: 278 INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSK---VGNSS 334

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
               + ++M + GI P++VT+  L++ F + ++I  A ++F  M   G+     TY  LI
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394

Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
           +GLC+ G + EA  L   M+   L+PN V  N +ING+CK+    KA    +++ + G++
Sbjct: 395 HGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVT 454

Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           P+V +Y + I   CK+G+  +A  +   M + G+ P  S
Sbjct: 455 PNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPES 493



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 169/341 (49%), Gaps = 5/341 (1%)

Query: 91  KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
           +NG       +F  +      L  N  I  +++  + K      GFE +++    G+  +
Sbjct: 154 RNGDIDQAKVMFSRMDDLG--LAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPN 211

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           + + N L+    ++GK      V+ E+ +R +  N  ++N ++ GLC+ G+++KA  ++E
Sbjct: 212 LYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLE 271

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            MK   ++P   T+N+L+DG C     G++ KA +  + +   G+ P  VT+N LI GF 
Sbjct: 272 RMKRAHINPTTRTFNMLMDGLCN---TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFS 328

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K  N S   ++  EM   GI+   VTY  L+N       +++A  +   M   GL P+  
Sbjct: 329 KVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQH 388

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
           T   LI+G C K  + +A  L+  + E  L P+ + YNT+I+ YCKE     A      M
Sbjct: 389 TYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM 448

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
           +  GV P+V++Y   I  L ++G     + ++ E+   G++
Sbjct: 449 VKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLK 489


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 236/498 (47%), Gaps = 62/498 (12%)

Query: 96  TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV----------KNMKPHLGFEAFKRAGDY 145
           T + ++F A S      C++ +++  + L  V          K+ KP    + F+     
Sbjct: 313 TLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKL 372

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
            L  + ++   L+    K G  E VE + +EM+ + I  N+ +++ ++NG  K G L++A
Sbjct: 373 NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA 432

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKG---------------GIG------------ 238
            ++M+ M    + P    Y ILIDGYCK G               G+             
Sbjct: 433 INVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNN 492

Query: 239 -----KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
                +M +A+ + KD+   G+L + V + +L+DGF K    SAA+ + EEM    I   
Sbjct: 493 LKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFD 552

Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
           VVTYN LINGL   GK  EA ++   M+  GL PN  T N +I  +CK+  ++ A  L++
Sbjct: 553 VVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWN 611

Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
           ++    + PS IT NTL+    + G +E A  + N M   G+ P++  +  L+   S+ G
Sbjct: 612 EMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSG 671

Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
               V  +  +LV+ G++     YN L+   C+   +KKA S+L  M +   +    + V
Sbjct: 672 KANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR---DGFVADTV 728

Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV------------REE----M 517
           TYN LI+G+C+   ++ A     ++L +G+ PN  TY ++            R+E    M
Sbjct: 729 TYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM 788

Query: 518 MEKGFIPDIEGHMYNISG 535
            E G  PD   +   ISG
Sbjct: 789 KENGLNPDASTYDTLISG 806



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 218/434 (50%), Gaps = 42/434 (9%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N+ +  +L+  Y K  K  +  + +      GLK + +  + L+  L +  + ++ E + 
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL 506

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           K++  R + L+  ++  +++G  KAGK + A +++E+M    +   VVTYN+LI+G  + 
Sbjct: 507 KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEH 566

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
           G     Y+A +V+  M+E G+ PN+ T+N +I  +CK   +  A++++ EM SH I    
Sbjct: 567 GK----YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSS 622

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING---------------- 338
           +T N+L+ GL   G++++A+ + +EM   G+ PN+V    L+N                 
Sbjct: 623 ITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQ 682

Query: 339 -------------------FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGR 379
                              FC+ ++ +KA  +   +   G     +TYN LI  YC+   
Sbjct: 683 LVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSH 742

Query: 380 MEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
           ++ A A    ML+ GV P++ TYN L+ GL   G +     + +++  NG+     TY+ 
Sbjct: 743 VKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDT 802

Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
           L+    K G  K+++ L  EM     +   P   TYNVLI  F + GK++ A  LLNE+ 
Sbjct: 803 LISGYGKIGNKKESIRLYCEMVA---QGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQ 859

Query: 500 EKGLIPNQTTYQIV 513
            +G+ P+ +TY I+
Sbjct: 860 VRGVPPSSSTYDIL 873



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 29/366 (7%)

Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
           +E++  ++N V+ G C+ G +N+A   +  M         +T NIL+ G+C+   IG   
Sbjct: 73  VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR---IGLAK 129

Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
             + +  ++V  G   + + FNTLIDG+CK   +S A+ + E M   G+ + +V+YN+LI
Sbjct: 130 YGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLI 189

Query: 302 NGLCVDGKLDEAVALRDEMMAS---------------------GLKPNVVTSNALINGFC 340
           NG C  G+ D+A +L  E+  S                      L+ +++T   +I+ +C
Sbjct: 190 NGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYC 249

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
           K+  +E+AR L++++   G  P V+TY+++++  CK+GR+ +A  +   M   GV P+  
Sbjct: 250 KQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHV 309

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
            Y  LI  L + G+        ++LV  GM   LV    LV  L K  K K+A    ++M
Sbjct: 310 AYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA----EDM 365

Query: 461 FK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
           F+ + K    PN +TY  LI G+C+ G +E    LL E+ EK + PN  TY  +     +
Sbjct: 366 FRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTK 425

Query: 520 KGFIPD 525
           KG + +
Sbjct: 426 KGILDE 431



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 229/497 (46%), Gaps = 87/497 (17%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           + ++ F K G++    ++ H +S       ++S+  ++               +  K+  
Sbjct: 187 TLINGFCKRGEYDKAKSLLHEISESRG--VKDSVFFNI--------------DDRIKKDD 230

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           +  L++ +++   ++    K+   E+   +Y+EM       ++ +++ ++NGLCK G+L+
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY---------------------- 241
           +A +++ +MK +GV P  V Y  LID   K G   + +                      
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350

Query: 242 ----------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
                     +A+ +F+ + +  ++PN +T+  LIDG+CK  ++     + +EM    I 
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410

Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK--------- 342
             V+TY+S+ING    G LDEA+ +  +M+   + PN      LI+G+CK          
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470

Query: 343 --------------------------KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
                                     K +++A  L  D++ +GL    + Y +L+D + K
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530

Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
            G+   A  M   M ++ +  DV TYN LI GL   G  E  +++ + ++  G+     T
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEA-KSVYSGMIEMGLAPNQAT 589

Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
           YNI++ A CK G+   A+ L +E   M+  K  P+ +T N L+ G  + G++E A  +LN
Sbjct: 590 YNIMIKAYCKQGELDNALELWNE---MKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLN 646

Query: 497 ELLEKGLIPNQTTYQIV 513
           E+   G+ PN   ++++
Sbjct: 647 EMSVMGIHPNLVIHRVL 663



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 207/397 (52%), Gaps = 27/397 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G    V+  N L+    K G+      + + M++  +  ++ S+N ++NG CK G+ +KA
Sbjct: 142 GTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKA 201

Query: 206 SDIMEDM-KSLGVSPKV--------------------VTYNILIDGYCKKGGIGKMYKAD 244
             ++ ++ +S GV   V                    +TY  +I  YCK+ G+ +   A 
Sbjct: 202 KSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEE---AR 258

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
           A++++M+ NG LP+ VT++++++G CKD  +S A ++  EM   G+    V Y +LI+ L
Sbjct: 259 ALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSL 318

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
              G   EA A + +++  G+  ++V    L++G  K    ++A  +F  +S+  L P+ 
Sbjct: 319 FKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNS 378

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           ITY  LID YCK G ME   ++   M ++ + P+V TY+ +I G +++G ++   N+M +
Sbjct: 379 ITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKK 438

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +++  +      Y IL+   CK GK + A  L +EM K+   K   N V ++VL+    +
Sbjct: 439 MLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM-KLSGLK--VNNVLFDVLVNNLKR 495

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
             ++++A  LL ++  +GL+ +   Y  + +   + G
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAG 532



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 189/368 (51%), Gaps = 18/368 (4%)

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
           + GL  +  + N +++A  K+G+ ++   ++ EMK  +I  +  + N ++ GL +AG++ 
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK---DMVENGILPNEV 260
           KA +++ +M  +G+ P +V + +L++   K G      KA+AV +    +V+ G+  N+ 
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSG------KANAVLQMHEQLVDMGLKINQE 693

Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
            +N LI  FC+      A  V + M   G  A  VTYN+LI G C    + +A+A   +M
Sbjct: 694 AYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQM 753

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +  G+ PN+VT N L+ G     L+ +   LFD + E GL+P   TY+TLI  Y K G  
Sbjct: 754 LNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNK 813

Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
           +++  +   M+ +G +P  STYN LI+  ++ G ++  R ++NE+   G+     TY+IL
Sbjct: 814 KESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDIL 873

Query: 441 VGALCKDGKSKKAVSLLDEMFK---------MEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
           +   C   K       L ++++         M  +   P   T   +   F + GK+ DA
Sbjct: 874 ICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDA 933

Query: 492 NGLLNELL 499
             LL E+ 
Sbjct: 934 EKLLKEIF 941



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 158/331 (47%), Gaps = 30/331 (9%)

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M+   + P ++ +N LI  +      G + +   ++ +M+ + + PN  T N L+  +CK
Sbjct: 1   MRKHNIVPTLLLWNQLIYHF---NAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCK 57

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A+ +   +    +    VTYN++I G C  G +++A      M+      + +T
Sbjct: 58  MGNLILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTIT 114

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N L+ GFC+  L +    + D++   G    VI +NTLID YCK G M  A  +   M 
Sbjct: 115 CNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMR 174

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV---------------------NNGM 430
             G+L D+ +YN LI G  + G  +  +++++E+                      N  +
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234

Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
            A L+TY  ++   CK    ++A +L +EM         P++VTY+ ++ G C+ G+L +
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMI---INGFLPDVVTYSSIVNGLCKDGRLSE 291

Query: 491 ANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
           A  LL E+ + G+ PN   Y  + + + + G
Sbjct: 292 AQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 41/250 (16%)

Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
           M  H I   ++ +N LI      G + +   +  EM+ S + PNV T N L++ +CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
           +  A  L  ++    +    +TYNT+I  +C+ G +  AF   + M+ +    D  T N 
Sbjct: 61  LILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
           L+ G  R G  +    IM+ LV+              G  CKD                 
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVS--------------GGTCKD----------------- 146

Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
                  ++ +N LI G+C+ G++  A  L+  + ++GL+ +  +Y  +     ++G   
Sbjct: 147 -------VIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYD 199

Query: 525 DIEGHMYNIS 534
             +  ++ IS
Sbjct: 200 KAKSLLHEIS 209



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 9/162 (5%)

Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
           E F +  + GL     + + L+    K G  ++   +Y EM  +       ++N +++  
Sbjct: 783 ELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDF 842

Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-------GIGKMYKADA--VF 247
            K GK+++A +++ +M+  GV P   TY+ILI G+C           + K+Y+ DA  + 
Sbjct: 843 AKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLI 902

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
            +M + G +P + T   +   F +   +  A K+ +E+ SH 
Sbjct: 903 TEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHA 944


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 224/457 (49%), Gaps = 21/457 (4%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID----MLMLAYVKNMKPHLGFEAF 139
           S ++ +   G F S+  +   +       C   +I +    ++  AY K   P    + F
Sbjct: 95  SLINNYANLGDFKSLEKVLDRMK------CEKRVIFEKCFIVIFKAYGKAHLPEKAVDLF 148

Query: 140 KR-AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM---KRRRIELNLDSFNFVLNG 195
            R A ++  K +  S N +L  +++EG F      Y  +   K   I  N+ +FN V+  
Sbjct: 149 DRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKA 208

Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
           +CK G ++ A  +  DM      P V TY  L+DG CK   I +   A ++  +M  +G 
Sbjct: 209 MCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDE---AVSLLDEMQIDGC 265

Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
            P+ VTFN LI+G CK  ++S A K+ + M   G     VTYN+LI+GLC+ GKL++A++
Sbjct: 266 FPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAIS 325

Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
           L D M++S   PNVVT   +ING  K+        +   + E+G   +   Y+TLI    
Sbjct: 326 LLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLF 385

Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
           KEG+ ++A  +   M  +G   +   Y+ +I GL R+G  +    +++E+ N G      
Sbjct: 386 KEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAY 445

Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
           T + L+    + G S +AV +  +M K    +   N V Y+VLI G C+ GK+++A  + 
Sbjct: 446 TCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQ---NEVCYSVLIHGLCKDGKVKEAMMVW 502

Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYN 532
            ++L KG  P+   Y  +   +   G + D    +YN
Sbjct: 503 TQMLGKGCKPDVVAYSSMINGLSIAGLVED-AMQLYN 538



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 208/384 (54%), Gaps = 8/384 (2%)

Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
           A    +  +VL+ N +++A+ K G  +D   V+++M  R+ E ++ ++  +++GLCKA +
Sbjct: 190 AKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADR 249

Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
           +++A  ++++M+  G  P  VT+N+LI+G CKKG +    +A  +  +M   G +PNEVT
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLS---RAAKLVDNMFLKGCIPNEVT 306

Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
           +NTLI G C    +  A+ + + M S      VVTY ++INGL   G+  +   +   M 
Sbjct: 307 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALME 366

Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
             G   N    + LI+G  K+   ++A  LF +++ +G   + I Y+ +ID  C++G+ +
Sbjct: 367 ERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPD 426

Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
           DA  + + M ++G  P+  T + L+ G    GN      +  ++  +      V Y++L+
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             LCKDGK K+A+ +  +M     +   P++V Y+ +I G    G +EDA  L NE+L +
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCK---PDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ 543

Query: 502 GL--IPNQTTYQIVREEMMEKGFI 523
           G    P+  TY I+   + ++  I
Sbjct: 544 GPDSQPDVVTYNILLNTLCKQSSI 567



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 182/369 (49%), Gaps = 25/369 (6%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDM---KSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
           SFN VLN + + G  ++A +    +   K + +SP V+T+N++I   CK   +G +  A 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK---VGLVDDAI 219

Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
            VF+DM      P+  T+ TL+DG CK + I  A+ + +EM   G     VT+N LINGL
Sbjct: 220 QVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGL 279

Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
           C  G L  A  L D M   G  PN VT N LI+G C K  +EKA  L D +      P+V
Sbjct: 280 CKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 339

Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
           +TY T+I+   K+GR  D   +   M +RG   +   Y+ LI+GL +EG  +   ++  E
Sbjct: 340 VTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKE 399

Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
           +   G     + Y+ ++  LC+DGK   AV +L E   M  +   PN  T + L+KGF +
Sbjct: 400 MTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSE---MTNKGCTPNAYTCSSLMKGFFE 456

Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEG 528
            G    A  +  ++ +     N+  Y +                V  +M+ KG  PD+  
Sbjct: 457 AGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVA 516

Query: 529 HMYNISGTS 537
           +   I+G S
Sbjct: 517 YSSMINGLS 525



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 162/371 (43%), Gaps = 34/371 (9%)

Query: 61  HSLLLTGRL------LHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDS 111
           H L L G+L      L  +V +K  P + ++   ++  VK G+    + +   +      
Sbjct: 312 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALME--ERG 369

Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
            C N  +   L+    K  K       FK     G + + +  + ++  L ++GK +D  
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
            V  EM  +    N  + + ++ G  +AG  ++A ++ +DM     +   V Y++LI G 
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI- 290
           CK    GK+ +A  V+  M+  G  P+ V ++++I+G      +  AM+++ EM   G  
Sbjct: 490 CKD---GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPD 546

Query: 291 -AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL--VEK 347
               VVTYN L+N LC    +  A+ L + M+  G  P++VT    +    ++KL   + 
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML-REKLDPPQD 605

Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIA 407
            R   D++  + L               K  R+  A  +   ML + + P  ST+  ++ 
Sbjct: 606 GREFLDELVVRLL---------------KRQRVLGASKIVEVMLQKLLPPKHSTWARVVE 650

Query: 408 GLSREGNVEGV 418
            L +   V+ V
Sbjct: 651 NLCKPKKVQAV 661


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 214/417 (51%), Gaps = 12/417 (2%)

Query: 96  TSVSTIFHALSTCSDSLC--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLS 153
           T+   +  A ++C DS+     S+++D     Y K+ +     +       +G+K + L 
Sbjct: 49  TAADLLKQAATSCPDSVTPLSASVVVD----GYCKSGRVAHARQLLDEMPRHGVKVNALC 104

Query: 154 CNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
            N LL A  +E   + V  + K M+   IE  + ++  +++GL  A  + K   + E+MK
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164

Query: 214 SLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDE 273
           S  +S  V  Y+ +I+ YC+ G +    +A  VF + V NGI PNE T+  LI+GFCK  
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNV---RRASEVFDECVGNGIEPNEHTYGALINGFCKIG 221

Query: 274 NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSN 333
            + AA  +  +M   G+    + +N++I+G C    +D+A+ ++  M   G++ +V T N
Sbjct: 222 QMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYN 281

Query: 334 ALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR 393
            L  G  +   +++A+ L   + E+G+ P+ ++Y TLI  +C EG M +A  +   M   
Sbjct: 282 TLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 341

Query: 394 GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKA 453
           G  P + TYN ++ G  ++G++       NE+   G+   + +Y  LV   C +GK   A
Sbjct: 342 GAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 401

Query: 454 VSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
           + L +E   M++    PN+V Y  LI G  ++G+ E+A  L + +L  GL P+   Y
Sbjct: 402 LRLFEE---MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 455



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 11/370 (2%)

Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
           ++LC NS     L+ AY +        E  K   + G++ +V +   L+  L        
Sbjct: 101 NALCYNS-----LLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITK 155

Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
           VE V++EMK + +  ++  ++ V+N  C+AG + +AS++ ++    G+ P   TY  LI+
Sbjct: 156 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 215

Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
           G+CK   IG+M  A+ +  DM   G+  N++ FNT+IDG+C+   +  A+++   M   G
Sbjct: 216 GFCK---IGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG 272

Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
           I   V TYN+L  GL    ++DEA  L   M+  G++PN V+   LI+  C +  + +AR
Sbjct: 273 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 332

Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
            LF +++  G  PS++TYN ++D Y K+G + +A   +N M  +G++PD+ +Y  L+ G 
Sbjct: 333 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGH 392

Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW 469
              G V+    +  E+   G +  LV Y  L+  L K+G+S++A  L D M     +   
Sbjct: 393 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML---GDGLT 449

Query: 470 PNIVTYNVLI 479
           P+   Y+ L+
Sbjct: 450 PDDALYSALV 459



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 180/348 (51%), Gaps = 25/348 (7%)

Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
           S + V++G CK+G++  A  ++++M   GV    + YN L+D Y ++    ++ +   + 
Sbjct: 69  SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE---ML 125

Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
           K M   GI P   T+  L+DG     +I+    VFEEM S  ++  V  Y+S+IN  C  
Sbjct: 126 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 185

Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
           G +  A  + DE + +G++PN  T  ALINGFCK   +E A +L  D+  +G+  + I +
Sbjct: 186 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 245

Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
           NT+ID YC++  ++ A  ++  M   G+  DV TYN L  GL R   ++  +N++  ++ 
Sbjct: 246 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 305

Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
            G+R   V+Y  L+   C +G   +A  L  EM     E   P++VTYNV++ G+ +KG 
Sbjct: 306 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE---PSLVTYNVMMDGYIKKGS 362

Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISG 535
           + +A    NE                   M +KG +PDI  +   + G
Sbjct: 363 IREAERFKNE-------------------MEKKGLVPDIYSYAALVHG 391



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 198/372 (53%), Gaps = 10/372 (2%)

Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
           LS + ++    K G+      +  EM R  +++N   +N +L+   +    ++ +++++ 
Sbjct: 68  LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127

Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
           M++ G+ P V TY IL+DG      I K+   +AVF++M    +  +   ++++I+ +C+
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKV---EAVFEEMKSKNLSGDVYFYSSVINAYCR 184

Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
             N+  A +VF+E   +GI     TY +LING C  G+++ A  L  +M   G+  N + 
Sbjct: 185 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 244

Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
            N +I+G+C+K +V+KA  +   + + G+   V TYNTL     +  RM++A  +   M+
Sbjct: 245 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304

Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
           ++GV P+  +Y  LI+    EG++   R +  E+  NG    LVTYN+++    K G  +
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364

Query: 452 KAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
           +A     E FK E EKK   P+I +Y  L+ G C  GK++ A  L  E+ ++G  PN   
Sbjct: 365 EA-----ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 419

Query: 510 YQIVREEMMEKG 521
           Y  +   + ++G
Sbjct: 420 YTALISGLAKEG 431



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 163/315 (51%), Gaps = 5/315 (1%)

Query: 95  FTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
            T V  +F  +   S +L  +      ++ AY +        E F      G++ +  + 
Sbjct: 153 ITKVEAVFEEMK--SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTY 210

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
             L+    K G+ E  E +  +M+ R + +N   FN +++G C+   ++KA +I   M+ 
Sbjct: 211 GALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEK 270

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+   V TYN L  G  +     +M +A  + + M+E G+ PN V++ TLI   C + +
Sbjct: 271 MGIELDVYTYNTLACGLRRAN---RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
           +  A ++F EM  +G    +VTYN +++G    G + EA   ++EM   GL P++ +  A
Sbjct: 328 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387

Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
           L++G C    V+ A  LF+++ ++G  P+++ Y  LI    KEGR E+AF + ++ML  G
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447

Query: 395 VLPDVSTYNCLIAGL 409
           + PD + Y+ L+  L
Sbjct: 448 LTPDDALYSALVGSL 462


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 202/377 (53%), Gaps = 23/377 (6%)

Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
           V+S + ++    KEG  +       +M  +RI  N+ ++N ++  LCKA  ++KA +++ 
Sbjct: 88  VVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 140

Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
            M   GV P  +TYN ++ G+C  G   +  +A    K M  +G+ P+ VT+N+L+D  C
Sbjct: 141 TMVKSGVMPDCMTYNSIVHGFCSSG---QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 197

Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
           K+   + A K+F+ M   G+   + TY +L+ G    G L E   L D M+ +G+ PN  
Sbjct: 198 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257

Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
             + L+  + K++ VE+A ++F  + +QGL+P+ +TY T+ID  CK GR+EDA      M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
           +D G+ PD   YN LI  L      E    +  E+++ G+    + +N ++ + CK+G+ 
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
            ++  L D M ++  +   P+I+T           G+ ++A  L       GL+PN  TY
Sbjct: 378 IESGKLFDLMVRIGVK---PDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTY 424

Query: 511 QIVREEMMEKGFIPDIE 527
           +++ E ++ +G + +++
Sbjct: 425 RLMAENIIGQGLLEELD 441



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 185/338 (54%), Gaps = 16/338 (4%)

Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG--VSPKVVTYN 225
           ED  +V+ E+ RR I  ++ S+N +LNGLC   +  +A +++  M   G    P VV+Y+
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
            +I+G+ K+G + K          M++  I PN VT+N++I   CK + +  AM+V   M
Sbjct: 93  TVINGFFKEGDLDK----------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
              G+    +TYNS+++G C  G+  EA+    +M + G++P+VVT N+L++  CK    
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
            +AR +FD ++++GL P + TY TL+  Y  +G + +   + + M+  G+ P+   ++ L
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
           +   +++  VE    + +++   G+    VTY  ++  LCK G+ + A+   ++M     
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI---D 319

Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
           E   P+ + YN LI   C   K E A  L  E+L++G+
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 186/357 (52%), Gaps = 18/357 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+    ++ N ++      G+ ++     K+M+   +E ++ ++N +++ LCK G+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             I + M   G+ P + TY  L+ GY  KG + +M+    +   MV NGI PN   F+ L
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMH---GLLDLMVRNGIHPNHYVFSIL 262

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           +  + K E +  AM VF +M   G+    VTY ++I+ LC  G++++A+   ++M+  GL
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
           +P+ +  N+LI+  C     EKA  LF ++ ++G+  S I +N++ID++CKEGR+ ++  
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           + + M+  GV PD+ T           G  +  +++     +NG+     TY ++   + 
Sbjct: 383 LFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 432

Query: 446 KDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
             G  ++    LD++F  ME      +    N +++   Q+G++  A   L+ + EK
Sbjct: 433 GQGLLEE----LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 485



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 13/238 (5%)

Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG--LKPNVVTSNAL 335
           A  VF+E+   GI   V +YN L+NGLC + +  EA+ L   M   G    P+VV+ + +
Sbjct: 36  ARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 336 INGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGV 395
           INGF K+  ++K       + +Q +SP+V+TYN++I A CK   ++ A  +  +M+  GV
Sbjct: 95  INGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 396 LPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
           +PD  TYN ++ G    G  +     + ++ ++G+   +VTYN L+  LCK+G+  +A  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 456 LLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
           + D    M K    P+I TY  L++G+  KG L + +GLL+ ++  G+ PN   + I+
Sbjct: 208 IFD---SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 122/220 (55%), Gaps = 13/220 (5%)

Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG--LSPSVITYN 368
           ++A  + DE++  G+ P+V + N L+NG C +   ++A  L   +++ G    P V++Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
           T+I+ + KEG +       + MLD+ + P+V TYN +IA L +   V+    ++  +V +
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
           G+    +TYN +V   C  G+ K+A+  L    KM  +   P++VTYN L+   C+ G+ 
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLK---KMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
            +A  + + + ++GL P+ TTY  + +    KG + ++ G
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHG 242



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 30/325 (9%)

Query: 84  SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
           S +H F  +G+          +   SD +  + +  + LM    KN +     + F    
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMR--SDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213

Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
             GLK  + +   LL+    +G   ++  +   M R  I  N   F+ ++    K  K+ 
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273

Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
           +A  +   M+  G++P  VTY  +ID  CK G   ++  A   F+ M++ G+ P+ + +N
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG---RVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM-- 321
           +LI   C  +    A ++F EM   GI    + +NS+I+  C +G++ E+  L D M+  
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390

Query: 322 -----------------------ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
                                  ++GL PN  T   +      + L+E+   LF  + + 
Sbjct: 391 GVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 450

Query: 359 GLSPSVITYNTLIDAYCKEGRMEDA 383
           G +      N ++    + G +  A
Sbjct: 451 GCTVDSGMLNFIVRELLQRGEITRA 475



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 13/258 (5%)

Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
           N  +  +L+ AY K  K       F +    GL  + ++   ++  L K G+ ED    +
Sbjct: 255 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 314

Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
           ++M    +  +   +N +++ LC   K  KA ++  +M   G+    + +N +ID +CK+
Sbjct: 315 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 374

Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
              G++ ++  +F  MV  G+ P+ +T          DE    A  +F    S+G+    
Sbjct: 375 ---GRVIESGKLFDLMVRIGVKPDIITLGR------NDE----AKDLFVAFSSNGLVPNY 421

Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
            TY  +   +   G L+E   L   M  +G   +    N ++    ++  + +A      
Sbjct: 422 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 481

Query: 355 ISEQGLSPSVITYNTLID 372
           I E+  S    T +  ID
Sbjct: 482 IDEKHFSLEASTASLFID 499


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 204/388 (52%), Gaps = 31/388 (7%)

Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
           +V++   +L    KEG  E+ + +   MKR    +NL+S+N  L GL + GKL +A  ++
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
           ++M  +G+ P + +YNI++DG CK G    +  A  +   M+ NGILP+ VT++TL+ G+
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNG---MLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406

Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
           C    +  A  +  EM S+  +    T N L++ L  +G++ EA  L  +M   G   + 
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466

Query: 330 VTSNALINGFCKKKLVEKA-----------------------RVLFDDISEQGLSPSVIT 366
           VT N +IN  C    ++KA                        ++ D IS +  +P ++T
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526

Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
           Y+T+I   CK GR++DA      M+ +G+ PD + Y+  I    REG +     ++ ++ 
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDME 586

Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQK 485
             G    L TYN L+  L    +  +   L+DEM    +EK   P++ TYN ++   C+ 
Sbjct: 587 KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEM----REKGVSPDVCTYNHMLNCLCEG 642

Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV 513
           G++ DA  +L+E+L+KG+ PN ++++I+
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRIL 670



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 199/378 (52%), Gaps = 10/378 (2%)

Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
           + S+   N LL++ ++E + E V ++YK+M   R+     +FN ++  LC +G L  A +
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
           + + M + G  P   T+ IL+ GYC+ G   K  +     + M   GILPN V +NTLI 
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM---GILPNNVLYNTLIS 225

Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS---G 324
            FCK+     A K+ ++M   G+   V T+NS I+ LC  GK+ EA  +  +M      G
Sbjct: 226 SFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELG 285

Query: 325 L-KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
           L  PNV+T   ++ GFCK+ ++E+A+ L D +       ++ +YN  +    + G++ +A
Sbjct: 286 LPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEA 345

Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
           + +   ML  G+ PD+ +YN ++ GL + G +   R +M  ++ NG+    VTY+ L+  
Sbjct: 346 WIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHG 405

Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
            C  GK  +A +LL EM         PN  T NVL+    ++G++ +A  LL ++ EKG 
Sbjct: 406 YCSKGKVFEANNLLHEMISNNCS---PNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 504 IPNQTTYQIVREEMMEKG 521
             +  T  I+   +   G
Sbjct: 463 GVDTVTCNIIINALCNNG 480



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 205/428 (47%), Gaps = 62/428 (14%)

Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           N L+  L   G  ED   ++ +M  R  E N  +F  ++ G C+AG  +K  +++  M++
Sbjct: 151 NLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRT 210

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
           +G+ P  V YN LI  +CK+G   K + A+ +   M E+G++P+  TFN+ I   C    
Sbjct: 211 MGILPNNVLYNTLISSFCKEG---KTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGK 267

Query: 275 ISAAMKVFEEMG---SHGIA-AGVVTYNSLINGLCVDGKLDEAVALRD------------ 318
           I  A ++F +M      G+    V+TY  ++ G C +G L+EA  L D            
Sbjct: 268 ILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLE 327

Query: 319 -----------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
                                  EM+  G++P++ + N +++G CK  ++  AR+L   +
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387

Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
              G+ P  +TY+TL+  YC +G++ +A  + + M+     P+  T N L+  L +EG +
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRI 447

Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------------- 461
               N++ ++   G     VT NI++ ALC +G+  KA+ +++ M+              
Sbjct: 448 SEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSF 507

Query: 462 ------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
                  +  +K  P++VTY+ +I G C+ G+L+DA     E++ KGL P+   Y     
Sbjct: 508 IGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIH 567

Query: 516 EMMEKGFI 523
               +G I
Sbjct: 568 SFCREGKI 575



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 249/542 (45%), Gaps = 87/542 (16%)

Query: 65  LTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIII 119
           L   L   +V+A+  P+  +F   + +   +G       +F  +    C      N    
Sbjct: 130 LVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEP----NEFTF 185

Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
            +L+  Y +      G E   +    G+  + +  N L+ +  KEGK  D E +  +M+ 
Sbjct: 186 GILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMRE 245

Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK---SLGVS-PKVVTYNILIDGYCKKG 235
             +  ++++FN  ++ LC +GK+ +AS I  DM+    LG+  P V+TY +++ G+CK+G
Sbjct: 246 DGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEG 305

Query: 236 GI--------------------------------GKMYKADAVFKDMVENGILPNEVTFN 263
            +                                GK+ +A  V K+M+  GI P+  ++N
Sbjct: 306 MLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYN 365

Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
            ++DG CK+  +S A  +   M  +GI    VTY++L++G C  GK+ EA  L  EM+++
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN 425

Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
              PN  T N L++   K+  + +A  L   ++E+G     +T N +I+A C  G+++ A
Sbjct: 426 NCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKA 485

Query: 384 FAMRNSMLDRG-----------------------VLPDVSTYNCLIAGLSREGNVEGVRN 420
             + N M   G                         PD+ TY+ +I+GL + G ++  + 
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKK 545

Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
              E+++ G++     Y+  + + C++GK   A  +L +M   EK      + TYN LI 
Sbjct: 546 KFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDM---EKRGCNKTLQTYNSLIL 602

Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQ----------------IVREEMMEKGFIP 524
           G   K ++ +  GL++E+ EKG+ P+  TY                  V +EM++KG  P
Sbjct: 603 GLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISP 662

Query: 525 DI 526
           +I
Sbjct: 663 NI 664



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 12/377 (3%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIE--LNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
           L+  L K G F      +K ++    E   ++  +N +L    +  ++   S + +DM  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
             VSP+  T+N+LI   C  G    +  A  +F  M   G  PNE TF  L+ G+C+   
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSG---HLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGL 197

Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
            S  +++  +M + GI    V YN+LI+  C +GK  +A  L D+M   GL P+V T N+
Sbjct: 198 ASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNS 257

Query: 335 LINGFCKK-KLVEKARVLFD-DISEQ-GLS-PSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
            I+  C   K++E +R+  D  I E+ GL  P+VITY  ++  +CKEG +E+A  + ++M
Sbjct: 258 RISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTM 317

Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
                  ++ +YN  + GL R G +     ++ E++  G+   + +YNI++  LCK+G  
Sbjct: 318 KRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGML 377

Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
             A  L+  M +       P+ VTY+ L+ G+C KGK+ +AN LL+E++     PN  T 
Sbjct: 378 SDARMLMGLMIR---NGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTC 434

Query: 511 QIVREEMMEKGFIPDIE 527
            ++   + ++G I + E
Sbjct: 435 NVLLHSLWKEGRISEAE 451



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 209/425 (49%), Gaps = 35/425 (8%)

Query: 107 TCSDSLCRNSIIIDM-----LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRAL 161
           T  D++ RN+  I++      +L  ++N K    +   K     G++  + S N ++  L
Sbjct: 312 TLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGL 371

Query: 162 VKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKV 221
            K G   D   +   M R  I  +  +++ +L+G C  GK+ +A++++ +M S   SP  
Sbjct: 372 CKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNT 431

Query: 222 VTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKV 281
            T N+L+    K+   G++ +A+ + + M E G   + VT N +I+  C +  +  A+++
Sbjct: 432 YTCNVLLHSLWKE---GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488

Query: 282 FEEMGSHGIAA-----------------------GVVTYNSLINGLCVDGKLDEAVALRD 318
              M +HG AA                        +VTY+++I+GLC  G+LD+A     
Sbjct: 489 VNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFI 548

Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
           EMM+ GL+P+    +  I+ FC++  +  A  +  D+ ++G + ++ TYN+LI     + 
Sbjct: 549 EMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKN 608

Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
           ++ + + + + M ++GV PDV TYN ++  L   G +    ++++E++  G+   + ++ 
Sbjct: 609 QIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFR 668

Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
           IL+ A CK    K +  + +    +   K+    + +N L+ G    GK+ +A  L    
Sbjct: 669 ILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVG----GKVAEAKELFETA 724

Query: 499 LEKGL 503
           L++  
Sbjct: 725 LDRSF 729



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 58/463 (12%)

Query: 63  LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIID-- 120
           L+  G+LL + +V K+   I               +    ++ +   D LC+N ++ D  
Sbjct: 336 LIRNGKLLEAWIVLKEMLGI--------------GIEPDIYSYNIVMDGLCKNGMLSDAR 381

Query: 121 MLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
           MLM   ++N                G+    ++ + LL     +GK  +   +  EM   
Sbjct: 382 MLMGLMIRN----------------GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN 425

Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK- 239
               N  + N +L+ L K G++++A ++++ M   G     VT NI+I+  C  G + K 
Sbjct: 426 NCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKA 485

Query: 240 ------MYKADAV--------FKDMVENGI-----LPNEVTFNTLIDGFCKDENISAAMK 280
                 M+   +         F  +V++ I      P+ VT++T+I G CK   +  A K
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKK 545

Query: 281 VFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFC 340
            F EM S G+      Y++ I+  C +GK+  A  +  +M   G    + T N+LI G  
Sbjct: 546 KFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLG 605

Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
            K  + +   L D++ E+G+SP V TYN +++  C+ GR+ DA ++ + ML +G+ P++S
Sbjct: 606 SKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNIS 665

Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVN-NGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
           ++  LI    +  + +    +    +N  G +  L  Y ++   L   GK  +A  L + 
Sbjct: 666 SFRILIKAFCKACDFKASHEVFEIALNVCGHKEAL--YTLMFNELLVGGKVAEAKELFET 723

Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
              +++     N + Y  LI   C+  KLE A+ +L+ L++KG
Sbjct: 724 --ALDRSFDIGNFL-YKDLIDRLCKDEKLEAASDVLHRLIDKG 763



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 14/252 (5%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           GL+      +  + +  +EGK      V K+M++R     L ++N ++ GL    ++ + 
Sbjct: 554 GLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFEL 613

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++++M+  GVSP V TYN +++  C+ G I     A +V  +M++ GI PN  +F  L
Sbjct: 614 YGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIND---APSVLDEMLQKGISPNISSFRIL 670

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGV-----VTYNSLINGLCVDGKLDEAVALRDEM 320
           I  FCK  +  A+ +VFE      IA  V       Y  + N L V GK+ EA  L +  
Sbjct: 671 IKAFCKACDFKASHEVFE------IALNVCGHKEALYTLMFNELLVGGKVAEAKELFETA 724

Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
           +             LI+  CK + +E A  +   + ++G      ++  +ID + K G  
Sbjct: 725 LDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNK 784

Query: 381 EDAFAMRNSMLD 392
             A  +   M++
Sbjct: 785 HVADELAERMME 796



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 31/251 (12%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           S  L  +S I D  + ++ +  K    F+  K     G   ++ + N L+  L  + +  
Sbjct: 552 SKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIF 611

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
           ++  +  EM+ + +  ++ ++N +LN LC+ G++N A  ++++M   G+SP + ++ ILI
Sbjct: 612 ELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILI 671

Query: 229 DGYCKKGGI-------------------------------GKMYKADAVFKDMVENGILP 257
             +CK                                   GK+ +A  +F+  ++     
Sbjct: 672 KAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDI 731

Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
               +  LID  CKDE + AA  V   +   G      ++  +I+G    G    A  L 
Sbjct: 732 GNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELA 791

Query: 318 DEMMASGLKPN 328
           + MM    + N
Sbjct: 792 ERMMEMASESN 802


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 208/441 (47%), Gaps = 80/441 (18%)

Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
           L++ L KEG+  D   +  EM  R +  ++ ++N +++G CK+G++  A  I   M+  G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
            +P   TYN LI G C     GK+ +A+ +    +  G  P  +TF  LI+G+CK E I 
Sbjct: 350 CNPDDWTYNSLIYGLCG----GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 277 AAMKV-----------------------------------FEEMGSHGIAAGVVTYNSLI 301
            A++V                                     EM ++G+A  VV Y S+I
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSII 465

Query: 302 NGLC-----------------------------------VDGKLDEAVALRDEMMASGLK 326
           +G C                                    D KL +A+AL  +M   G+ 
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525

Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
           P V+    LI G CKK   + A  LF+ + + GL+P    YN L DA CK GR E+A++ 
Sbjct: 526 PGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
              ++ +GV+    TY  L+ G S+ GN +    ++ ++VN G +A L TY++L+ ALCK
Sbjct: 586 ---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
             K  +A+S+LD+M     +    NIV Y ++I    ++GK + A  L NE++  G  P+
Sbjct: 643 QKKLNEALSILDQMTVSGVK---CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPS 699

Query: 507 QTTYQIVREEMMEKGFIPDIE 527
            TTY +      + G I + E
Sbjct: 700 ATTYTVFISSYCKIGQIEEAE 720



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 191/367 (52%), Gaps = 9/367 (2%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G   +V++   L+    K  + +D   V   M     +L+L ++  ++N L K  +L +A
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
            + + +M + G++P VV Y  +IDGYCK G +G    A  VFK M   G  PN  T+ +L
Sbjct: 443 KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG---AALEVFKLMEHEGCHPNAWTYGSL 499

Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
           I G  +D+ +  AM +  +M   GI  GV+ Y +LI G C   + D A  L + M  +GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
            P+    N L +  CK    E+A   +  +  +G+  + +TY +L+D + K G  + A  
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
           +   M++ G   D+ TY+ L+  L ++  +    +I++++  +G++  +V Y I++  + 
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
           K+GK   A SL +EM     +   P+  TY V I  +C+ G++E+A  L+ E+   G+ P
Sbjct: 677 KEGKHDHAKSLFNEMISSGHK---PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTP 733

Query: 506 NQTTYQI 512
           +  TY I
Sbjct: 734 DVVTYHI 740



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 218/463 (47%), Gaps = 49/463 (10%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
           ++ L  N +I   ++  Y K        E FK     G   +  +   L+  L+++ K  
Sbjct: 451 ANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
               +  +M+   I   + ++  ++ G CK  + + A  + E M+  G++P    YN+L 
Sbjct: 511 KAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLT 570

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
           D  CK G      +A+  +  +V  G++  +VT+ +L+DGF K  N   A  + E+M + 
Sbjct: 571 DALCKSG------RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G  A + TY+ L+  LC   KL+EA+++ D+M  SG+K N+V    +I+   K+   + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
           + LF+++   G  PS  TY   I +YCK G++E+A  +   M   GV PDV TY+  I G
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFING 744

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF------- 461
               G ++   + +  +V+        TY +L+    K       +SL++  +       
Sbjct: 745 CGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK-------MSLINAHYIDTSGMW 797

Query: 462 -------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
                        +M K    P +VTY+ +I GFC+  +LE+A  LL+ +L K + PN+ 
Sbjct: 798 NWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEE 857

Query: 509 TYQIVRE----------------EMMEKGFIPDIEGHMYNISG 535
            Y ++ +                +M+E GF P +E + Y I G
Sbjct: 858 IYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVG 900



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 200/413 (48%), Gaps = 7/413 (1%)

Query: 109 SDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
            + L  +++  + +++AY K     +    F    + G++    +CN LL    +     
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
              ++   M       N  S+  ++ GL +A  + +A  ++  M   G S  +  Y +LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLI 291

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
            G CK+   G+++ A  +  +M   G++P+  T+N +IDG+CK   +  A+ +   M  +
Sbjct: 292 KGLCKE---GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
           G      TYNSLI GLC  GKLDEA  L +  +A G  P V+T   LING+CK + ++ A
Sbjct: 349 GCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407

Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
             +  ++        +  Y  LI+   K+ R+++A    N M   G+ P+V  Y  +I G
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDG 467

Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
             + G V     +   + + G      TY  L+  L +D K  KA++L+    KM+++  
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT---KMQEDGI 524

Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
            P ++ Y  LI+G C+K + ++A  L   + + GL P++  Y ++ + + + G
Sbjct: 525 TPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 205/448 (45%), Gaps = 56/448 (12%)

Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
             +A +R G   L  S    N  LR+L++    E +  +Y  + +  +  +  ++N ++ 
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187

Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK--------------- 239
             CK G L  A      ++  G+     T N L+ GYC+   + K               
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247

Query: 240 -----------MYKADAVFKD------MVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
                      +Y+A  V +       MV++G   N   +  LI G CK+  I  A  + 
Sbjct: 248 NEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLL 307

Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
           +EM   G+   V TYN++I+G C  G++ +A+ ++  M  +G  P+  T N+LI G C  
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG 367

Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
           KL E   +L   I+ +G +P+VIT+  LI+ YCK  R++DA  ++++M+      D+  Y
Sbjct: 368 KLDEAEELLNGAIA-RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
             LI  L ++  ++  +  +NE+  NG+   +V Y  ++   CK G    A+    E+FK
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAAL----EVFK 482

Query: 463 -MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE------ 515
            ME E   PN  TY  LI G  Q  KL  A  L+ ++ E G+ P    Y  + +      
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542

Query: 516 ---------EMMEK-GFIPDIEGHMYNI 533
                    EMMEK G  PD +   YN+
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQA--YNV 568



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 54/390 (13%)

Query: 177 MKRRRIELNLDSFNFVLNGLCKAGK---LNKASDIMEDMKSLG-----VSPKVVTYNILI 228
           + RRR   N D    VL+ +  +G    + +A D ++ ++ +G     +SPK   YN+ +
Sbjct: 96  LARRRAPANYD--KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKC--YNLAL 151

Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
               +      M K   ++  +V+ G+LP+ VT+NT+I  +CK  +++ A + F  +   
Sbjct: 152 RSLLRFDMTEYMGK---LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRES 208

Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVAL----------RDE------------------- 319
           G+     T N+L+ G C    L +A  L          R+E                   
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREA 268

Query: 320 ------MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
                 M+  G   N+     LI G CK+  +  AR L D++  +G+ PSV TYN +ID 
Sbjct: 269 LVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
           YCK GRM+DA  ++  M   G  PD  TYN LI GL   G ++    ++N  +  G    
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPT 387

Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
           ++T+  L+   CK  +   A+ +   M     +    ++  Y VLI    +K +L++A  
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKL---DLQAYGVLINVLIKKCRLKEAKE 444

Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
            LNE+   GL PN   Y  + +   + G +
Sbjct: 445 TLNEMFANGLAPNVVIYTSIIDGYCKVGMV 474



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 19/315 (6%)

Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
           G+K ++++   ++  ++KEGK +  + ++ EM     + +  ++   ++  CK G++ +A
Sbjct: 660 GVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 719

Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
             ++ +M+  GV+P VVTY+I I+G C  G +G M +A +  K MV+    PN  T+  L
Sbjct: 720 EHLIGEMERDGVTPDVVTYHIFING-C--GHMGYMDRAFSTLKRMVDASCEPNCWTYWLL 776

Query: 266 IDGFCKDENISA----------------AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
           +  F K   I+A                  ++ E M  HG+   VVTY+S+I G C   +
Sbjct: 777 LKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATR 836

Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
           L+EA  L D M+   + PN      LI   C  KL  K      D+ E G  P + +Y+ 
Sbjct: 837 LEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHY 896

Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
           LI   C EG  + A ++   +L      +   +  L  GL + G+V+    ++  + N  
Sbjct: 897 LIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956

Query: 430 MRAGLVTYNILVGAL 444
            R    +Y++L  ++
Sbjct: 957 CRIDSESYSMLTDSI 971


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.137    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,023,835,762
Number of Sequences: 23463169
Number of extensions: 335078272
Number of successful extensions: 1133496
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8513
Number of HSP's successfully gapped in prelim test: 4589
Number of HSP's that attempted gapping in prelim test: 840344
Number of HSP's gapped (non-prelim): 80124
length of query: 537
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 389
effective length of database: 8,886,646,355
effective search space: 3456905432095
effective search space used: 3456905432095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)