BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047648
(537 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/584 (51%), Positives = 398/584 (68%), Gaps = 50/584 (8%)
Query: 2 FCSANSTIED-----------ITELIRNHHWSKL----KNTDPNTVILQLFNSDADPVLI 46
CS++STI I +LI HWSKL + +PN + QL +S+ DP L
Sbjct: 25 LCSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLC 84
Query: 47 LRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALS 106
LRY+ W K S SL LT +LLHSL AK+Y KIRSFL FV+NG V +IFHA+S
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144
Query: 107 TCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGK 166
C D++C NSII DML+LAY N + LGFEAFKR+G YG K S LSC L+ AL+KE +
Sbjct: 145 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNI 226
DVEYVYKEM RR+I+ N+ +FN V+N LCK GK+NKA D+MEDMK G SP VV+YN
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
LIDGYCK GG GKMYKADAV K+MVEN + PN TFN LIDGF KD+N+ +MKVF+EM
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
+ V++YNSLINGLC GK+ EA+++RD+M+++G++PN++T NALINGFCK +++
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
+A +F + QG P+ YN LIDAYCK G+++D FA++ M G++PDV TYNCLI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK---- 462
AGL R GN+E + + ++L + G+ LVT++IL+ C+ G+S+KA LL EM K
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 463 ----------------------------MEKEKKWP-NIVTYNVLIKGFCQKGKLEDANG 493
MEKE++ N+ +YNVL++G+ QKGKLEDAN
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNISGTS 537
LLNE+LEKGL+PN+ TY+IV+EEM+++GF+PDIEGH++N+S S
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 41/517 (7%)
Query: 30 NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMF 89
+ +I L D L+L +F W+ R +L ++H V +K +S + F
Sbjct: 88 DHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 145
Query: 90 VKNGKFT---SVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYG 146
+ K S F L + + D+ V F++ +YG
Sbjct: 146 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 205
Query: 147 LKSSVLSCNQLLRALVKEG-KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
L SV SCN L L K+ K V++E + N+ S+N V++ +C+ G++ +A
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 265
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK----------------------- 242
++ M+ G +P V++Y+ +++GYC+ G + K++K
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 243 ---------ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
A+ F +M+ GILP+ V + TLIDGFCK +I AA K F EM S I
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
V+TY ++I+G C G + EA L EM GL+P+ VT LING+CK ++ A + +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
+ + G SP+V+TY TLID CKEG ++ A + + M G+ P++ TYN ++ GL + G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
N+E ++ E G+ A VTY L+ A CK G+ KA +L EM + P IV
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ---PTIV 562
Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
T+NVL+ GFC G LED LLN +L KG+ PN TT+
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 199/378 (52%), Gaps = 11/378 (2%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
GLK + ++ L + K + E + EM R+ I + + +++G CK G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
S +M S ++P V+TY +I G+C+ IG M +A +F +M G+ P+ VTF L
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQ---IGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
I+G+CK ++ A +V M G + VVTY +LI+GLC +G LD A L EM GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
+PN+ T N+++NG CK +E+A L + GL+ +TY TL+DAYCK G M+ A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ ML +G+ P + T+N L+ G G +E ++N ++ G+ T+N LV C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K A ++ +M P+ TY L+KG C+ +++A L E+ KG
Sbjct: 608 IRNNLKAATAIYKDMC---SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 506 NQTTYQIVREEMMEKGFI 523
+ +TY + + KGF+
Sbjct: 665 SVSTYSV-----LIKGFL 677
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 206/390 (52%), Gaps = 9/390 (2%)
Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
EAF G+ + L+ K G + EM R I ++ ++ +++G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
C+ G + +A + +M G+ P VT+ LI+GYCK G + ++ V M++ G
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR---VHNHMIQAGCS 453
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
PN VT+ TLIDG CK+ ++ +A ++ EM G+ + TYNS++NGLC G ++EAV L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
E A+GL + VT L++ +CK ++KA+ + ++ +GL P+++T+N L++ +C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
G +ED + N ML +G+ P+ +T+N L+ N++ I ++ + G+ T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLL 495
Y LV CK K+A L EM K K + ++ TY+VLIKGF ++ K +A +
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEM----KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 496 NELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+++ +GL ++ + + KG PD
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKY-KGKRPD 718
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 183/375 (48%), Gaps = 11/375 (2%)
Query: 89 FVKNGKFTSVSTIF---HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDY 145
F K G + S F H+ D L +II + + L E F +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCK---- 415
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
GL+ ++ +L+ K G +D V+ M + N+ ++ +++GLCK G L+ A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++++ +M +G+ P + TYN +++G CK G I + K F+ G+ + VT+ TL
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE---AAGLNADTVTYTTL 532
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
+D +CK + A ++ +EM G+ +VT+N L+NG C+ G L++ L + M+A G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PN T N+L+ +C + ++ A ++ D+ +G+ P TY L+ +CK M++A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M +G VSTY+ LI G + R + +++ G+ A ++
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712
Query: 446 KDGKSKKAVSLLDEM 460
K + V +DE+
Sbjct: 713 KGKRPDTIVDPIDEI 727
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 5/337 (1%)
Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
F+ L G L +A + E M + G+ V + N+ + K K A VF+
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD--CYKTATAIIVFR 235
Query: 249 DMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDG 308
+ E G+ N ++N +I C+ I A + M G V++Y++++NG C G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
+LD+ L + M GLKPN ++I C+ + +A F ++ QG+ P + Y
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
TLID +CK G + A M R + PDV TY +I+G + G++ + +E+
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
G+ VT+ L+ CK G K A + + M + PN+VTY LI G C++G L
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDL 472
Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+ AN LL+E+ + GL PN TY + + + G I +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 5/359 (1%)
Query: 70 LHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKN 129
+HS + + + F + G +FH + L +S+ L+ Y K
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--CKGLEPDSVTFTELINGYCKA 434
Query: 130 MKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
F G +V++ L+ L KEG + + EM + ++ N+ ++
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
N ++NGLCK+G + +A ++ + ++ G++ VTY L+D YCK G+M KA + K+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS---GEMDKAQEILKE 551
Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
M+ G+ P VTFN L++GFC + K+ M + GIA T+NSL+ C+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
L A A+ +M + G+ P+ T L+ G CK + +++A LF ++ +G S SV TY+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
LI + K + +A + + M G+ D ++ + + + + ++E++ N
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 278/530 (52%), Gaps = 30/530 (5%)
Query: 2 FCSANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASH 61
C + S++ D+ ++++ +S+L D I+ L + +L Y +R+
Sbjct: 129 LCYSTSSVFDL--VVKS--YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR 184
Query: 62 SLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII 118
++ + ++ ++ P + ++ + F G T+F + T N +
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET--KGCLPNVVT 242
Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
+ L+ Y K K GF+ + GL+ +++S N ++ L +EG+ ++V +V EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
RR L+ ++N ++ G CK G ++A + +M G++P V+TY LI CK G
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN-- 360
Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
M +A M G+ PNE T+ TL+DGF + ++ A +V EM +G + VVTYN
Sbjct: 361 -MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
+LING CV GK+++A+A+ ++M GL P+VV+ + +++GFC+ V++A + ++ E+
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
G+ P ITY++LI +C++ R ++A + ML G+ PD TY LI EG++E
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV- 477
+ NE+V G+ +VTY++L+ L K ++++A LL ++F E+ P+ VTY+
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF---YEESVPSDVTYHTL 596
Query: 478 --------------LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
LIKGFC KG + +A+ + +L K P+ T Y I+
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 260/551 (47%), Gaps = 60/551 (10%)
Query: 19 HHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK 78
HH S N P L S D LIL++ W+ +L LH L K
Sbjct: 40 HHLSA--NFTPEAASNLLLKSQNDQALILKFLNWANP--HQFFTLRCKCITLHILTKFKL 95
Query: 79 YPKIRSFLH-MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFE 137
Y + + K S +F +L D S + D+++ +Y +
Sbjct: 96 YKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALS 155
Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGK-FEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
A +G VLS N +L A ++ + E V+KEM ++ N+ ++N ++ G
Sbjct: 156 IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------- 237
C AG ++ A + + M++ G P VVTYN LIDGYCK I
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 238 -------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
G+M + V +M G +EVT+NTLI G+CK+ N A+ + E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
M HG+ V+TY SLI+ +C G ++ A+ D+M GL PN T L++GF +K
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
+ +A + ++++ G SPSV+TYN LI+ +C G+MEDA A+ M ++G+ PDV +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKME 464
+++G R +V+ + E+V G++ +TY+ L+ C+ ++K+A L +EM ++
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 465 KEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIP 524
P+ TY LI +C +G LE A L NE M+EKG +P
Sbjct: 516 LP---PDEFTYTALINAYCMEGDLEKALQLHNE-------------------MVEKGVLP 553
Query: 525 DIEGHMYNISG 535
D+ + I+G
Sbjct: 554 DVVTYSVLING 564
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 53/356 (14%)
Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
L+ ++G + V +EM ++ ++N ++NG C GK+ A ++EDMK G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
+SP VV+Y+ ++ G+C+ + + + V ++MVE GI P+ +T+++LI GFC+
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALR---VKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
A ++EEM G+ TY +LIN C++G L++A+ L +EM+ G+ P+VVT + LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 337 NG--------------------------------------------------FCKKKLVE 346
NG FC K ++
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
+A +F+ + + P YN +I +C+ G + A+ + M+ G L T L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
L +EG V + +++ ++ + + +LV ++G + +L EM K
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 167/368 (45%), Gaps = 53/368 (14%)
Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
LC N L+ + + + + + D G SV++ N L+ GK ED
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
V ++MK + + ++ S++ VL+G C++ +++A + +M G+ P +TY+ LI G+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
C++ + +A ++++M+ G+ P+E T+ LI+ +C + ++ A+++ EM G+
Sbjct: 496 CEQR---RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 292 AGVVTYNSLINGL----------------------------------------------- 304
VVTY+ LINGL
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 305 ---CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
C+ G + EA + + M+ KP+ N +I+G C+ + KA L+ ++ + G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
+T L+ A KEG++ + ++ +L L + L+ REGN++ V ++
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDV 732
Query: 422 MNELVNNG 429
+ E+ +G
Sbjct: 733 LAEMAKDG 740
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 207/373 (55%), Gaps = 9/373 (2%)
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+G+K ++++ N L++ G+ E + EMK + + ++ ++N +L+ +C G+
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR--- 310
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
AS+++ +MK +G+ P V+YNILI G C G +M A A +MV+ G++P T+NT
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRG-CSNNGDLEM--AFAYRDEMVKQGMVPTFYTYNT 367
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
LI G + I AA + E+ GI VTYN LING C G +A AL DEMM G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
++P T +LI C+K +A LF+ + +G+ P ++ NTL+D +C G M+ AF
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
++ M + PD TYNCL+ GL EG E R +M E+ G++ ++YN L+
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
K G +K A + DEM + P ++TYN L+KG + + E A LL E+ +G++
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFN---PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 505 PNQTTYQIVREEM 517
PN +++ V E M
Sbjct: 605 PNDSSFCSVIEAM 617
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 228/464 (49%), Gaps = 26/464 (5%)
Query: 80 PKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSL-CRNSIIIDMLMLAYVKNMKPHLGFEA 138
PK + L V + S+ +F L D L +++I+ D+L+ + E
Sbjct: 118 PKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIEC 177
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F + G +CN +L L + + E+ Y +M R I+ N+ +FN ++N LCK
Sbjct: 178 FYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCK 237
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
GKL KA + M+ G+ P +VTYN L+ G+ + G++ A + +M G P+
Sbjct: 238 EGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR---GRIEGARLIISEMKSKGFQPD 294
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
T+N ++ C N A +V EM G+ V+YN LI G +G L+ A A RD
Sbjct: 295 MQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
EM+ G+ P T N LI+G + +E A +L +I E+G+ +TYN LI+ YC+ G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
+ AFA+ + M+ G+ P TY LI L R+ + ++V GM+ LV N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
L+ C G +A SLL EM M P+ VTYN L++G C +GK E+A L+ E+
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSIN---PDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 499 LEKGLIPNQTTYQ----------------IVREEMMEKGFIPDI 526
+G+ P+ +Y +VR+EM+ GF P +
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 145/265 (54%), Gaps = 3/265 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G+ + + N L+ L E K E E + +E++ + I L+ ++N ++NG C+ G KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+ ++M + G+ P TY LI C+K K +AD +F+ +V G+ P+ V NTL
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKN---KTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
+DG C N+ A + +EM I VTYN L+ GLC +GK +EA L EM G+
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
KP+ ++ N LI+G+ KK + A ++ D++ G +P+++TYN L+ K E A
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLS 410
+ M G++P+ S++ +I +S
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
SPK VT + +K I ++ + D +E + + F+ L+ C+ +
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLET---KSTILFDLLVRCCCQLRMVDE 173
Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
A++ F M G T N ++ L +++ A +M +K NV T N +IN
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
CK+ ++KA+ + G+ P+++TYNTL+ + GR+E A + + M +G P
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
D+ TYN +++ + EG V M E+ G+ V+YNIL+ +G + A +
Sbjct: 294 DMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 458 DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
DEM K+ P TYN LI G + K+E A L+ E+ EKG++ + TY I+
Sbjct: 351 DEMV---KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 24/257 (9%)
Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
+ ++ L+ C +DEA+ M G P T N ++ + +E A V +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
D+ + +V T+N +I+ CKEG+++ A M G+ P + TYN L+ G S
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
G +EG R I++E+ + G + + TYN ++ +C +G++ + + + E+ + P+
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV------PDS 327
Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY----------------QIVREE 516
V+YN+LI+G G LE A +E++++G++P TY +I+ E
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 517 MMEKGFIPDIEGHMYNI 533
+ EKG + D YNI
Sbjct: 388 IREKGIVLD--SVTYNI 402
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 213/388 (54%), Gaps = 7/388 (1%)
Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
R +YG + ++ +L L K G ++++M+ R I+ ++ ++ V++ LCK G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
+ A + +M+ G+ VVTY+ LI G C GK + ++M+ I+P+ V
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND---GKWDDGAKMLREMIGRNIIPDVV 316
Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
TF+ LID F K+ + A +++ EM + GIA +TYNSLI+G C + L EA + D M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
++ G +P++VT + LIN +CK K V+ LF +IS +GL P+ ITYNTL+ +C+ G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
A + M+ RGV P V TY L+ GL G + I ++ + M G+ YNI+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
+ +C K A SL + + P++VTYNV+I G C+KG L +A+ L ++ E
Sbjct: 497 IHGMCNASKVDDAWSLF---CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 501 KGLIPNQTTYQI-VREEMMEKGFIPDIE 527
G P+ TY I +R + G I +E
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVE 581
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 218/431 (50%), Gaps = 41/431 (9%)
Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
Y + K F RA G + ++ + L+ EG+ + + M + +
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
L + + ++NGLC G++++A +++ M G P VTY +++ CK G A
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL---ALD 231
Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
+F+ M E I + V ++ +ID CKD + A+ +F EM GI A VVTY+SLI GLC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 306 VDGKLD-----------------------------------EAVALRDEMMASGLKPNVV 330
DGK D EA L +EM+ G+ P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
T N+LI+GFCK+ + +A +FD + +G P ++TY+ LI++YCK R++D + +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
+G++P+ TYN L+ G + G + + + E+V+ G+ +VTY IL+ LC +G+
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
KA+ + + KM+K + I YN++I G C K++DA L L +KG+ P+ TY
Sbjct: 472 NKALEIFE---KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 511 QIVREEMMEKG 521
++ + +KG
Sbjct: 529 NVMIGGLCKKG 539
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 220/388 (56%), Gaps = 8/388 (2%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
L + F++ + +K+SV+ + ++ +L K+G F+D ++ EM+ + I+ ++ +++ ++
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
GLC GK + + ++ +M + P VVT++ LID + K+G K+ +A ++ +M+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITR 344
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
GI P+ +T+N+LIDGFCK+ + A ++F+ M S G +VTY+ LIN C ++D+
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
+ L E+ + GL PN +T N L+ GFC+ + A+ LF ++ +G+ PSV+TY L+D
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
C G + A + M + + YN +I G+ V+ ++ L + G++
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
+VTYN+++G LCK G +A D +F KM+++ P+ TYN+LI+ L +
Sbjct: 525 VVTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEK 520
L+ E+ G + +T ++V + + ++
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 193/362 (53%), Gaps = 6/362 (1%)
Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
LS + LR + + K D +++ M + R FN + + + + + + +
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
M+ G+ + T I+I+ YC+K K+ A +V + G P+ +TF+TL++GFC
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKK---KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152
Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
+ +S A+ + + M +VT ++LINGLC+ G++ EA+ L D M+ G +P+ VT
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
++N CK A LF + E+ + SV+ Y+ +ID+ CK+G +DA ++ N M
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
+G+ DV TY+ LI GL +G + ++ E++ + +VT++ L+ K+GK
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
+A L +EM P+ +TYN LI GFC++ L +AN + + ++ KG P+ TY
Sbjct: 333 EAKELYNEMI---TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 512 IV 513
I+
Sbjct: 390 IL 391
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 9/321 (2%)
Query: 67 GRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLM 123
++L ++ P + +F + +FVK GK +++ + T + ++I + L+
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT--RGIAPDTITYNSLI 357
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ K H + F G + +++ + L+ + K + +D +++E+ + +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
N ++N ++ G C++GKLN A ++ ++M S GV P VVTY IL+DG C G++ KA
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN---GELNKA 474
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
+F+ M ++ + +N +I G C + A +F + G+ VVTYN +I G
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
LC G L EA L +M G P+ T N LI + + L +++ G S
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 364 VITYNTLIDAYCKEGRMEDAF 384
T +ID + R++ +F
Sbjct: 595 SSTIKMVIDML-SDRRLDKSF 614
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
I ++Y + VD K+++A+ L + M+ S P + N L + + K +
Sbjct: 31 ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90
Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
+ G+ + T +I+ YC++ ++ AF++ G PD T++ L+ G
Sbjct: 91 GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-------- 461
EG V +++ +V R LVT + L+ LC G+ +A+ L+D M
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 462 ------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
KME+ ++V Y+++I C+ G +DA L NE
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 498 LLEKGLIPNQTTY-----------------QIVREEMMEKGFIPDI 526
+ KG+ + TY +++R EM+ + IPD+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR-EMIGRNIIPDV 315
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 222/434 (51%), Gaps = 54/434 (12%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR-IELNLDSFNFVLNGLCKAGKL 202
++G S +S N ++ KEG+ ED +EM + + +FN ++NGLCKAG +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------- 237
A +IM+ M G P V TYN +I G CK G +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 238 -------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
++ +A + + + GILP+ TFN+LI G C N AM++FEEM S G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
TYN LI+ LC GKLDEA+ + +M SG +V+T N LI+GFCK +A
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
+FD++ G+S + +TYNTLID CK R+EDA + + M+ G PD TYN L+
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
R G+++ +I+ + +NG +VTY L+ LCK G+ + A LL + +M+ P
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTP 610
Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-LIPNQTTYQIV-----------RE--- 515
+ YN +I+G +K K +A L E+LE+ P+ +Y+IV RE
Sbjct: 611 H--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 516 ---EMMEKGFIPDI 526
E++EKGF+P+
Sbjct: 669 FLVELLEKGFVPEF 682
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 201/368 (54%), Gaps = 7/368 (1%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
++GLK N++L LV + VE + +M I+ ++ +FN ++ LC+A +L
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
A ++EDM S G+ P T+ ++ GY ++G + + + + MVE G + V+ N
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR---IREQMVEFGCSWSNVSVN 263
Query: 264 TLIDGFCKDENISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
++ GFCK+ + A+ +EM + G T+N+L+NGLC G + A+ + D M+
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
G P+V T N++I+G CK V++A + D + + SP+ +TYNTLI CKE ++E+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
A + + +G+LPDV T+N LI GL N + E+ + G TYN+L+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
+LC GK +A+++L + ME +++TYN LI GFC+ K +A + +E+ G
Sbjct: 444 SLCSKGKLDEALNMLKQ---MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 503 LIPNQTTY 510
+ N TY
Sbjct: 501 VSRNSVTY 508
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 201/367 (54%), Gaps = 7/367 (1%)
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+G+K V + N L++AL + + + ++M + + +F V+ G + G L+
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV-ENGILPNEVTFN 263
A I E M G S V+ N+++ G+CK+G ++ A ++M ++G P++ TFN
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEG---RVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
TL++G CK ++ A+++ + M G V TYNS+I+GLC G++ EAV + D+M+
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
PN VT N LI+ CK+ VE+A L ++ +G+ P V T+N+LI C A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
+ M +G PD TYN LI L +G ++ N++ ++ +G ++TYN L+
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
CK K+++A + DE ME N VTYN LI G C+ ++EDA L+++++ +G
Sbjct: 480 FCKANKTREAEEIFDE---MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 504 IPNQTTY 510
P++ TY
Sbjct: 537 KPDKYTY 543
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 22/351 (6%)
Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
+L L ++G + I+EDMKS T+ ILI+ Y + ++ D
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID-- 146
Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
E G+ P+ +N +++ ++ +M GI V T+N LI LC +L
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
A+ + ++M + GL P+ T ++ G+ ++ ++ A + + + E G S S ++ N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 372 DAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM 430
+CKEGR+EDA M ++ G PD T+N L+ GL + G+V+ IM+ ++ G
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 431 RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLED 490
+ TYN ++ LCK G+ K+AV +LD+M + PN VTYN LI C++ ++E+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS---PNTVTYNTLISTLCKENQVEE 383
Query: 491 ANGLLNELLEKGLIPNQTTYQ-------IVR---------EEMMEKGFIPD 525
A L L KG++P+ T+ + R EEM KG PD
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 10/388 (2%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
N++ + L+ K + E + G+ V + N L++ L ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
+EM+ + E + ++N +++ LC GKL++A ++++ M+ G + V+TYN LIDG+CK
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
K +A+ +F +M +G+ N VT+NTLIDG CK + A ++ ++M G
Sbjct: 484 ---NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
TYNSL+ C G + +A + M ++G +P++VT LI+G CK VE A L
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG-VLPDVSTYNCLIAGLSREG 413
I +G++ + YN +I ++ + +A + ML++ PD +Y + GL G
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 414 N-VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
+ + + EL+ G + +L L + V L++ + M+K +
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV--MQKARFSEEE 718
Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLE 500
V+ ++KG + K +DA L +L+
Sbjct: 719 VS---MVKGLLKIRKFQDALATLGGVLD 743
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 13/291 (4%)
Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
LS C+ S+ + +ID + K K E F +G+ + ++ N L+ L K
Sbjct: 463 LSGCARSVITYNTLID----GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
+ ED + +M + + ++N +L C+ G + KA+DI++ M S G P +VTY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
LI G CK G++ A + + + GI +N +I G + + A+ +F E
Sbjct: 579 GTLISGLCKA---GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 285 MGSHGIA-AGVVTYNSLINGLC-VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
M A V+Y + GLC G + EAV E++ G P + L G
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
Query: 343 KLVEKARVLFDDISEQG-LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
+ E L + + ++ S + +++ K + +DA A +LD
Sbjct: 696 SMEETLVKLVNMVMQKARFSEEEV---SMVKGLLKIRKFQDALATLGGVLD 743
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 258/536 (48%), Gaps = 45/536 (8%)
Query: 10 EDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKE--LRASHSLLLTG 67
+ I ++ W L + D L+L + L L++ W K+ L H + L
Sbjct: 21 KSIYNILTIDRWGSLNHMDYRQARLRLVHGK----LALKFLKWVVKQPGLETDHIVQLVC 76
Query: 68 RLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAY 126
H LV A+ Y R L + + +GK S +F AL T N + D+L+ Y
Sbjct: 77 ITTHILVRARMYDPARHILKELSLMSGK---SSFVFGALMTTYRLCNSNPSVYDILIRVY 133
Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
++ E F+ G YG SV +CN +L ++VK G+ V KEM +R+I ++
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193
Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG----------- 235
+FN ++N LC G K+S +M+ M+ G +P +VTYN ++ YCKKG
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 236 ----GI-----------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
G+ ++ K + +DM + I PNEVT+NTLI+GF +
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
+ A ++ EM S G++ VT+N+LI+G +G EA+ + M A GL P+ V+
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
L++G CK + AR + + G+ ITY +ID CK G +++A + N M G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
+ PD+ TY+ LI G + G + + I+ + G+ + Y+ L+ C+ G K+A+
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
+ + M E + T+NVL+ C+ GK+ +A + + G++PN ++
Sbjct: 494 RIYEAMI---LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 201/396 (50%), Gaps = 6/396 (1%)
Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
Y K + E G+ + V + N L+ L + + + ++M++R I N
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
++N ++NG GK+ AS ++ +M S G+SP VT+N LIDG+ +G + K
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK--- 354
Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
+F M G+ P+EV++ L+DG CK+ A + M +G+ G +TY +I+GLC
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
+G LDEAV L +EM G+ P++VT +ALINGFCK + A+ + I GLSP+ I
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
Y+TLI C+ G +++A + +M+ G D T+N L+ L + G V M +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
++G+ V+++ L+ G+ KA S+ DEM K+ P TY L+KG C+
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKG 591
Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
G L +A L L + Y + M + G
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 23/399 (5%)
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+GL + ++ N L+ + EG F++ ++ M+ + + + S+ +L+GLCK + +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
A MK GV +TY +IDG CK G + + A + +M ++GI P+ VT++
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE---AVVLLNEMSKDGIDPDIVTYSA 443
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
LI+GFCK A ++ + G++ + Y++LI C G L EA+ + + M+ G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
+ T N L+ CK V +A ++ G+ P+ ++++ LI+ Y G AF
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
++ + M G P TY L+ GL + G++ + L V YN L+ A+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG-L 503
CK G KAVSL EM + P+ TY LI G C+KGK A E +G +
Sbjct: 624 CKSGNLAKAVSLFGEMV---QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDI 526
+PN+ Y RE+M G PDI
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 193/384 (50%), Gaps = 23/384 (5%)
Query: 160 ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSP 219
+ K G+++ Y ++M ++ + N +++G + GK+ K +D++ +M + P
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752
Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAM 279
+ TYNIL+ GY K+ + + +++ ++ NGILP+++T ++L+ G C+ + +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSF---LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
K+ + G+ T+N LI+ C +G+++ A L M + G+ + T +A+++
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
+ +++R++ ++S+QG+SP Y LI+ C+ G ++ AF ++ M+ + P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDE 459
+ ++ L++ G + ++ ++ + + ++ L+ CK+G +A+ L
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL--- 986
Query: 460 MFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ-------- 511
M ++V+YNVLI G C KG + A L E+ G + N TTY+
Sbjct: 987 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046
Query: 512 ---------IVREEMMEKGFIPDI 526
I+ ++++ +GFI +
Sbjct: 1047 RETAFSGADIILKDLLARGFITSM 1070
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 9/416 (2%)
Query: 91 KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
K GK ++ SD + N++ D L+ Y + + F F G +
Sbjct: 520 KAGKVAEAEEFMRCMT--SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 577
Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
+ LL+ L K G + E K + ++ +N +L +CK+G L KA +
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637
Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG-ILPNEVTFNTLIDGF 269
+M + P TY LI G C+KG K A K+ G +LPN+V + +DG
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKG---KTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
K A + E+M + G +VT N++I+G GK+++ L EM PN+
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
T N L++G+ K+K V + +L+ I G+ P +T ++L+ C+ +E + +
Sbjct: 755 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
+ RGV D T+N LI+ G + +++ + + G+ T + +V L ++ +
Sbjct: 815 FICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 874
Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
+++ +L E M K+ P Y LI G C+ G ++ A + E++ + P
Sbjct: 875 FQESRMVLHE---MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 3/256 (1%)
Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
N ++ LI + ++ I ++++F MG +G V T N+++ + G+ +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
EM+ + P+V T N LIN C + EK+ L + + G +P+++TYNT++ YCK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
GR + A + + M +GV DV TYN LI L R + ++ ++ + VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
N L+ +GK A LL+EM PN VT+N LI G +G ++A +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLS---PNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 498 LLEKGLIPNQTTYQIV 513
+ KGL P++ +Y ++
Sbjct: 359 MEAKGLTPSEVSYGVL 374
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
+ML+ N + + F+ K G+ +C+ ++ L + +F++ V EM +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK 239
+ I + ++NGLC+ G + A + E+M + + P V + ++ K GK
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK---CGK 944
Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
+A + + M++ ++P +F TL+ CK+ N+ A+++ M + G+ +V+YN
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING-FCKKKLVEKARVLFDDISEQ 358
LI GLC G + A L +EM G N T ALI G ++ A ++ D+ +
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1064
Query: 359 GLSPSV 364
G S+
Sbjct: 1065 GFITSM 1070
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
+ ++RAL K GK ++ + + M + ++ + SF +++ CK G + +A ++ M +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
G+ +V+YN+LI G C K G M A ++++M +G L N T+ LI G E
Sbjct: 993 CGLKLDLVSYNVLITGLCAK---GDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049
Query: 275 -ISAAMKVFEEMGSHGIAAGVVTYNSL 300
S A + +++ +A G +T SL
Sbjct: 1050 AFSGADIILKDL----LARGFITSMSL 1072
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 232/456 (50%), Gaps = 37/456 (8%)
Query: 92 NGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
+ +F + S++ H L+ S + + ++++ +YV++ +L F D G
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLY-EVIINSYVQSQSLNLSISYFNEMVDNGFVPGS 129
Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
N LL +V F + E K + + L++ SF ++ G C+AG++ K+ D++ +
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIE 188
Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGK--------------------------MYKADA 245
+ G SP VV Y LIDG CKKG I K ++K
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 246 ------VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
+++ M E+G+ PN T+N +++ CKD A +VF+EM G++ +VTYN+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
LI GLC + KL+EA + D+M + G+ PN++T N LI+GFC + KA L D+ +G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
LSPS++TYN L+ +C++G A M M +RG+ P TY LI +R N+E
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
+ + G+ + TY++L+ C G+ +A L M + E PN V YN +I
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE---PNEVIYNTMI 485
Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
G+C++G A LL E+ EK L PN +Y+ + E
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 214/378 (56%), Gaps = 6/378 (1%)
Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
F+ ++G +V+ L+ K+G+ E + ++ EM + + N ++ ++NG
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
L K G + ++ E M+ GV P + TYN +++ CK G + A VF +M E G+
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG---RTKDAFQVFDEMRERGV 299
Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
N VT+NTLI G C++ ++ A KV ++M S GI ++TYN+LI+G C GKL +A++
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
L ++ + GL P++VT N L++GFC+K A + ++ E+G+ PS +TY LID +
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
+ ME A +R SM + G++PDV TY+ LI G +G + + +V V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
YN ++ CK+G S +A+ LL E ME+++ PN+ +Y +I+ C++ K ++A L+
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKE---MEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 496 NELLEKGLIPNQTTYQIV 513
++++ G+ P+ + ++
Sbjct: 537 EKMIDSGIDPSTSILSLI 554
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 186/319 (58%), Gaps = 3/319 (0%)
Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
L N +L+ KN GFE +++ + G+ ++ + N ++ L K+G+ +D
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
V+ EM+ R + N+ ++N ++ GLC+ KLN+A+ +++ MKS G++P ++TYN LIDG+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
C G+GK+ KA ++ +D+ G+ P+ VT+N L+ GFC+ + S A K+ +EM GI
Sbjct: 349 C---GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
VTY LI+ +++A+ LR M GL P+V T + LI+GFC K + +A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
F + E+ P+ + YNT+I YCKEG A + M ++ + P+V++Y +I L +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 412 EGNVEGVRNIMNELVNNGM 430
E + ++ +++++G+
Sbjct: 526 ERKSKEAERLVEKMIDSGI 544
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 190/395 (48%), Gaps = 52/395 (13%)
Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
+ FN++L + + N+ + KS V V ++ ILI G C+ G I K + +
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFD---L 185
Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
++ E G PN V + TLIDG CK I A +F EMG G+ A TY LINGL
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
+G + + ++M G+ PN+ T N ++N CK + A +FD++ E+G+S +++T
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
YNTLI C+E ++ +A + + M G+ P++ TYN LI G G + ++ +L
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM-------------------------- 460
+ G+ LVTYNILV C+ G + A ++ EM
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 461 ------FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-- 512
ME+ P++ TY+VLI GFC KG++ +A+ L ++EK PN+ Y
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 513 --------------VREEMMEKGFIPDIEGHMYNI 533
+ +EM EK P++ + Y I
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 181/364 (49%), Gaps = 58/364 (15%)
Query: 220 KVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN---------------- 263
K Y ++I+ Y + + + + F +MV+NG +P FN
Sbjct: 93 KFRLYEVIINSYVQSQSLNL---SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149
Query: 264 ------------------TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
LI G C+ I + + E+ G + VV Y +LI+G C
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
G++++A L EM GL N T LING K + ++ +++ + E G+ P++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
TYN +++ CK+GR +DAF + + M +RGV ++ TYN LI GL RE + +++++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
++G+ L+TYN L+ C GK KA+SL + ++ P++VTYN+L+ GFC+K
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD---LKSRGLSPSLVTYNILVSGFCRK 386
Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEK-----------GFIPDIEGH 529
G A ++ E+ E+G+ P++ TY I+ R + MEK G +PD+ H
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV--H 444
Query: 530 MYNI 533
Y++
Sbjct: 445 TYSV 448
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 238/473 (50%), Gaps = 54/473 (11%)
Query: 76 AKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLG 135
A+K+ + S NG ++SV++ F S++ R V+ + G
Sbjct: 72 AQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ----------MVRTGELEEG 121
Query: 136 FEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
F+ + +G ++ C L+R + GK + + ++ ++ ++N +++G
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
CKAG++N A +++ M VSP VVTYN ++ C GK+ +A V M++
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDS---GKLKQAMEVLDRMLQRDC 235
Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA 315
P+ +T+ LI+ C+D + AMK+ +EM G VVTYN L+NG+C +G+LDEA+
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 316 LRDEMMASGLKPNVVTS-----------------------------------NALINGFC 340
++M +SG +PNV+T N LIN C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 341 KKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVS 400
+K L+ +A + + + + G P+ ++YN L+ +CKE +M+ A M+ RG PD+
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 401 TYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
TYN ++ L ++G VE I+N+L + G L+TYN ++ L K GK+ KA+ LLDEM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 461 FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
+ + P+ +TY+ L+ G ++GK+++A +E G+ PN T+ +
Sbjct: 476 RAKDLK---PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 239/471 (50%), Gaps = 21/471 (4%)
Query: 46 ILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHM---FVKNGKFTSVSTIF 102
++R FC K +A+ ++L L + P + ++ M + K G+ + ++
Sbjct: 143 LIRGFCRLGKTRKAA-------KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
+S D + N+I+ + +K E R V++ L+ A
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQ-----AMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
++ + EM+ R ++ ++N ++NG+CK G+L++A + DM S G P V+
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
T+NI++ C G+ A+ + DM+ G P+ VTFN LI+ C+ + A+ +
Sbjct: 311 THNIILRSMCS---TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
E+M HG ++YN L++G C + K+D A+ + M++ G P++VT N ++ CK
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
VE A + + +S +G SP +ITYNT+ID K G+ A + + M + + PD TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
+ L+ GLSREG V+ +E G+R VT+N ++ LCK ++ +A+ L +F
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL--VFM 545
Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
+ + K PN +Y +LI+G +G ++A LLNEL KGL+ + Q+
Sbjct: 546 INRGCK-PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVA 595
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 193/367 (52%), Gaps = 9/367 (2%)
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
N LR +V+ G+ E+ + M ++ ++ G C+ GK KA+ I+E ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
G P V+TYN++I GYCK G I A +V M + P+ VT+NT++ C
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINN---ALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
+ AM+V + M V+TY LI C D + A+ L DEM G P+VVT N
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
L+NG CK+ +++A +D+ G P+VIT+N ++ + C GR DA + ML +G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
P V T+N LI L R+G + +I+ ++ +G + ++YN L+ CK+ K +A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
L+ M +P+IVTYN ++ C+ GK+EDA +LN+L KG P TY V
Sbjct: 400 EYLERMVS---RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 515 EEMMEKG 521
+ + + G
Sbjct: 457 DGLAKAG 463
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 182/333 (54%), Gaps = 9/333 (2%)
Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
L + + G+L + +E+M G P ++ LI G+C+ +GK KA + + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR---LGKTRKAAKILEILEG 165
Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
+G +P+ +T+N +I G+CK I+ A+ V + M ++ VVTYN+++ LC GKL +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222
Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
A+ + D M+ P+V+T LI C+ V A L D++ ++G +P V+TYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
CKEGR+++A N M G P+V T+N ++ + G ++ +++ G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
+VT+NIL+ LC+ G +A+ +L+ KM + PN ++YN L+ GFC++ K++ A
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILE---KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 493 GLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
L ++ +G P+ TY + + + G + D
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 164/305 (53%), Gaps = 22/305 (7%)
Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
G++ + ++MV +G +P+ + TLI GFC+ A K+ E + G V+TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
N +I+G C G+++ A+++ D M S P+VVT N ++ C +++A + D + +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 358 QGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEG 417
+ P VITY LI+A C++ + A + + M DRG PDV TYN L+ G+ +EG ++
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 418 VRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
+N++ ++G + ++T+NI++ ++C G+ A LL +M ++ P++VT+N+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNI 349
Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV----------------REEMMEKG 521
LI C+KG L A +L ++ + G PN +Y + E M+ +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 522 FIPDI 526
PDI
Sbjct: 410 CYPDI 414
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 18/314 (5%)
Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF--KDMVENGILPNEVTFNTLIDGF 269
++S G++ + + L GY G G ++ F +D+ N L V L +GF
Sbjct: 63 VESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGF 122
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
K E M HG ++ +LI G C GK +A + + + SG P+V
Sbjct: 123 ----------KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
+T N +I+G+CK + A + D +S +SP V+TYNT++ + C G+++ A + +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
ML R PDV TY LI R+ V +++E+ + G +VTYN+LV +CK+G+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
+A+ L++ M PN++T+N++++ C G+ DA LL ++L KG P+ T
Sbjct: 290 LDEAIKFLND---MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 510 YQIVREEMMEKGFI 523
+ I+ + KG +
Sbjct: 347 FNILINFLCRKGLL 360
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
V N+ + + G+L+E + M+ G P+++ LI GFC+ KA + +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDR-GVLPDVSTYNCLIAGLSREG 413
+ G P VITYN +I YCK G + +A S+LDR V PDV TYN ++ L G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSG 218
Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIV 473
++ +++ ++ ++TY IL+ A C+D A+ LLDE M P++V
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE---MRDRGCTPDVV 275
Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
TYNVL+ G C++G+L++A LN++ G PN T+ I+ M G D E
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 217/381 (56%), Gaps = 6/381 (1%)
Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
R + G + V++ N ++ + + G + ++M+ R ++ ++ +++ +++ LC+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
++ A + ++M++ G+ VVTYN L+ G CK G K + KDMV I+PN +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVI 299
Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
TFN L+D F K+ + A ++++EM + GI+ ++TYN+L++G C+ +L EA + D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
+ + P++VT +LI G+C K V+ +F +IS++GL + +TY+ L+ +C+ G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
+ A + M+ GVLPDV TY L+ GL G +E I +L + M G+V Y +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
+ +CK GK + A +L + + PN++TY V+I G C+KG L +AN LL ++ E
Sbjct: 480 IEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 501 KGLIPNQTTYQIVREEMMEKG 521
G PN TY + + G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDG 557
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 200/355 (56%), Gaps = 17/355 (4%)
Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
ST DSLCR+ I FK G+KSSV++ N L+R L K G
Sbjct: 232 STIIDSLCRDGCI--------------DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
K+ D + K+M R I N+ +FN +L+ K GKL +A+++ ++M + G+SP ++TYN
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
L+DGYC + ++ +A+ + MV N P+ VTF +LI G+C + + MKVF +
Sbjct: 338 TLMDGYCMQN---RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G+ A VTY+ L+ G C GK+ A L EM++ G+ P+V+T L++G C +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
EKA +F+D+ + + ++ Y T+I+ CK G++EDA+ + S+ +GV P+V TY +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
I+GL ++G++ ++ ++ +G TYN L+ A +DG + L++EM
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 220/389 (56%), Gaps = 14/389 (3%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
L + ++ + +K+ V + + ++ +L ++G + ++KEM+ + I+ ++ ++N ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
GLCKAGK N + +++DM S + P V+T+N+L+D + K+ GK+ +A+ ++K+M+
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE---GKLQEANELYKEMITR 327
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
GI PN +T+NTL+DG+C +S A + + M + + +VT+ SLI G C+ ++D+
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
+ + + GL N VT + L+ GFC+ ++ A LF ++ G+ P V+TY L+D
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 374 YCKEGRMEDAFA----MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
C G++E A ++ S +D G++ Y +I G+ + G VE N+ L G
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
++ ++TY +++ LCK G +A LL KME++ PN TYN LI+ + G L
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMM 518
+ L+ E+ G + ++ ++V + ++
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 203/372 (54%), Gaps = 6/372 (1%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++ A+ + +F V K+++ I N+ + N ++N C+ K A ++
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
+ LG P T+N LI G +G K+ +A + MVENG P+ VT+N++++G
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEG---KVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
C+ + S A+ + +M + A V TY+++I+ LC DG +D A++L EM G+K +V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
VT N+L+ G CK +L D+ + + P+VIT+N L+D + KEG++++A +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M+ RG+ P++ TYN L+ G + + N+++ +V N +VT+ L+ C +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
+ + + K N VTY++L++GFCQ GK++ A L E++ G++P+ T
Sbjct: 384 VDDGMKVFRN---ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 510 YQIVREEMMEKG 521
Y I+ + + + G
Sbjct: 441 YGILLDGLCDNG 452
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 11/340 (3%)
Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC---- 232
M +R I N+ + + L K G L +D++ + S S + +I C
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLR--TDLLCTISSFFSSCERDFSSISNGNVCFRER 59
Query: 233 KKGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
+ GI + K DA+ F++M+ + LP+ V F+ + + + + +++ +GI
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
A + T N +IN C K A ++ ++M G +P+ T N LI G + V +A V
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
L D + E G P V+TYN++++ C+ G A + M +R V DV TY+ +I L
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
R+G ++ ++ E+ G+++ +VTYN LV LCK GK LL +M E P
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVP 296
Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
N++T+NVL+ F ++GKL++AN L E++ +G+ PN TY
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 236/453 (52%), Gaps = 19/453 (4%)
Query: 69 LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCS-DSLCRNSIIIDMLMLAYV 127
L L V + + + +S + + V S S++F +L +C ++D LM+ Y
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMC--GFLVDALMITYT 181
Query: 128 KNMKPHLGF-----EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI 182
LGF + F+ + + + C LL ++K + Y E+
Sbjct: 182 D-----LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGF 236
Query: 183 ELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK 242
LN+ FN ++N CK G ++ A + +++ + P VV++N LI+GYCK G + + ++
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
M ++ P+ T++ LI+ CK+ + A +F+EM G+ V + +LI+
Sbjct: 297 LK---HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
G +G++D +M++ GL+P++V N L+NGFCK + AR + D + +GL P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
ITY TLID +C+ G +E A +R M G+ D ++ L+ G+ +EG V +
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
E++ G++ VTY +++ A CK G ++ LL E M+ + P++VTYNVL+ G
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE---MQSDGHVPSVVTYNVLLNGL 530
Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE 515
C+ G++++A+ LL+ +L G++P+ TY + E
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 185/338 (54%), Gaps = 6/338 (1%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
D G +V N L+ KEG D + V+ E+ +R ++ + SFN ++NG CK G L+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
+ + M+ P V TY+ LI+ CK+ KM A +F +M + G++PN+V F
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKEN---KMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
TLI G ++ I + +++M S G+ +V YN+L+NG C +G L A + D M+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
GL+P+ +T LI+GFC+ VE A + ++ + G+ + ++ L+ CKEGR+ DA
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
ML G+ PD TY ++ ++G+ + ++ E+ ++G +VTYN+L+
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
LCK G+ K A LLD M + P+ +TYN L++G
Sbjct: 530 LCKLGQMKNADMLLDAMLNI---GVVPDDITYNTLLEG 564
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 165/295 (55%), Gaps = 6/295 (2%)
Query: 227 LIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG 286
L+D K G ++ + ++++ G N FN L++ FCK+ NIS A KVF+E+
Sbjct: 211 LLDRMMKLNPTGTIW---GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 287 SHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVE 346
+ VV++N+LING C G LDE L+ +M S +P+V T +ALIN CK+ ++
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 347 KARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
A LFD++ ++GL P+ + + TLI + + G ++ ML +G+ PD+ YN L+
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
G + G++ RNI++ ++ G+R +TY L+ C+ G + A+ + E M++
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE---MDQN 444
Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
+ V ++ L+ G C++G++ DA L E+L G+ P+ TY ++ + +KG
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 195/369 (52%), Gaps = 10/369 (2%)
Query: 85 FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
++ F K G + +F ++ SL + + L+ Y K GF +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEIT--KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+ V + + L+ AL KE K + ++ EM +R + N F +++G + G+++
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
+ + M S G+ P +V YN L++G+CK G + A + M+ G+ P+++T+ T
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNG---DLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK-LDEAVALRDEMMAS 323
LIDGFC+ ++ A+++ +EM +GI V +++L+ G+C +G+ +D ALR EM+ +
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR-EMLRA 479
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
G+KP+ VT +++ FCKK + L ++ G PSV+TYN L++ CK G+M++A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
+ ++ML+ GV+PD TYN L+ G R N R I + G+ A L +Y +V
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHAN-SSKRYIQKPEI--GIVADLASYKSIVNE 596
Query: 444 LCKDGKSKK 452
L + K +
Sbjct: 597 LDRASKDHR 605
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 3/263 (1%)
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
L+D K + E+ G V +N L+N C +G + +A + DE+
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
L+P VV+ N LING+CK +++ L + + P V TY+ LI+A CKE +M+ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
+ + M RG++P+ + LI G SR G ++ ++ ++++ G++ +V YN LV
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
CK+G A +++D M + P+ +TY LI GFC+ G +E A + E+ + G+
Sbjct: 391 CKNGDLVAARNIVDGMIR---RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 505 PNQTTYQIVREEMMEKGFIPDIE 527
++ + + M ++G + D E
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAE 470
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 254/523 (48%), Gaps = 28/523 (5%)
Query: 32 VILQLFNSD----ADPVLILRYFCWSTKELRASHSLLLTGRLLHS---------LVVAKK 78
V+ L SD A P + F S+ L+ S LL LL+ L A +
Sbjct: 77 VLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALR 136
Query: 79 ----YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMK 131
YP S L VK +F +F L+ + + + A VK
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVF--LNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 132 PHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNF 191
G E F R + SV N L+ L K + D E ++ EM RR+ +L ++N
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 192 VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMV 251
+++G CKAG K+ + E MK+ + P ++T+N L+ G K G + A+ V K+M
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED---AENVLKEMK 311
Query: 252 ENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLD 311
+ G +P+ TF+ L DG+ +E AA+ V+E G+ T + L+N LC +GK++
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 312 EAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLI 371
+A + MA GL PN V N +I+G+C+K + AR+ + + +QG+ P + YN LI
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 372 DAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMR 431
+C+ G ME+A N M +GV P V TYN LI G R+ + +I+ E+ +NG
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
+V+Y L+ LCK K +A + + ME P + YN+LI G C KGK+EDA
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRD---MEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 492 NGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 534
E+L+KG+ N TY + + + G + + E + IS
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 210/430 (48%), Gaps = 47/430 (10%)
Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
I + L+ Y K P F+ +R ++ S+++ N LL+ L K G ED E V KE
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 177 MKR-----------------------------------RRIELNLDSFNFVLNGLCKAGK 201
MK +++N + + +LN LCK GK
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG-IGKMYKADAVFKDMVENGILPNEV 260
+ KA +I+ + G+ P V YN +IDGYC+KG +G K +A M + G+ P+ +
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA----MEKQGMKPDHL 425
Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
+N LI FC+ + A K +M G++ V TYN LI G + D+ + EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
+G PNVV+ LIN CK + +A+++ D+ ++G+SP V YN LID C +G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
EDAF ML +G+ ++ TYN LI GLS G + +++ E+ G++ + TYN L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
+ G ++ ++L +E M++ P + TY++LI C K +E L E+
Sbjct: 606 ISGYGFAGNVQRCIALYEE---MKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM-- 659
Query: 501 KGLIPNQTTY 510
L P+ Y
Sbjct: 660 -SLKPDLLVY 668
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 221/466 (47%), Gaps = 67/466 (14%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
++ +L Y N K ++ A D G+K + +C+ LL AL KEGK E E +
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 175 -----------------------------------KEMKRRRIELNLDSFNFVLNGLCKA 199
+ M+++ ++ + ++N ++ C+
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGIL 256
G++ A + MK GVSP V TYNILI GY G+ Y+ D F K+M +NG +
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGY------GRKYEFDKCFDILKEMEDNGTM 491
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
PN V++ TLI+ CK + A V +M G++ V YN LI+G C GK+++A
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
EM+ G++ N+VT N LI+G + +A L +IS +GL P V TYN+LI Y
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
G ++ A+ M G+ P + TY+ LI+ ++EG +E + E+ ++ L+
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLV 667
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
YN ++ G +KA +L +M +EK + TYN LI G + GKL + L++
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQM--IEKSIGL-DKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 497 ELLEKGLIPNQTTYQIV----------------REEMMEKGFIPDI 526
E+ + + P TY I+ EM EKGF+ D+
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 12/354 (3%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G+ SV + N L+ ++ +F+ + KEM+ N+ S+ ++N LCK KL +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+ DM+ GVSPKV YN+LIDG C KG I ++ K+M++ GI N VT+NTL
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS---KEMLKKGIELNLVTYNTL 570
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
IDG +S A + E+ G+ V TYNSLI+G G + +AL +EM SG+
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
KP + T + LI+ C K+ +E LF ++S L P ++ YN ++ Y G ME AF
Sbjct: 631 KPTLKTYHLLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
++ M+++ + D +TYN LI G + G + VR++++E+ M TYNI+V C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
+ A EM +EK + ++ N L+ G ++ + ++A +++E+
Sbjct: 747 EVKDYMSAYVWYREM----QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 154/295 (52%), Gaps = 9/295 (3%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
D G+ V N L+ +GK ED KEM ++ IELNL ++N +++GL GKL+
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
+A D++ ++ G+ P V TYN LI GY G G + + A++++M +GI P T++
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
LI C E I ++F EM + ++ YN +++ V G +++A L+ +M+
Sbjct: 639 LLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
+ + T N+LI G K + + R L D+++ + + P TYN ++ +C+ A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
+ M ++G L DV N L++GL E + +++E+ NG G VT +
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM--NGRMLGDVTVD 807
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 256/537 (47%), Gaps = 82/537 (15%)
Query: 61 HSLLLTGRLLHSLVVAKKYPKIRS-FLHMFVKNG--KFTSVSTIFHALSTCSDSLCRNSI 117
H+ L ++H LV + + +S L M ++G + V+++ S C N
Sbjct: 111 HTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS----NDS 166
Query: 118 IIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEM 177
+ D+L+ YV+ K EAF G S+ +CN L+ +LV+ G E VY+E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 178 KRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG-- 235
R + +N+ + N ++N LCK GK+ K + ++ GV P +VTYN LI Y KG
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 236 -----------------GI-------------GKMYKADAVFKDMVENGILPNEVTFNTL 265
G+ GK +A VF +M+ +G+ P+ T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVA---------- 315
+ CK ++ KVF +M S + +V ++S+++ G LD+A+
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 316 -------------------------LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARV 350
LR+EM+ G +VVT N +++G CK+K++ +A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 351 LFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
LF++++E+ L P T LID +CK G +++A + M ++ + DV TYN L+ G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 411 REGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP 470
+ G+++ + I ++V+ + ++Y+ILV ALC G +A + DEM + K K P
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM--ISKNIK-P 583
Query: 471 NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP-----NQTTYQIVREEMMEKGF 522
++ N +IKG+C+ G D L +++ +G +P N Y VREE M K F
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 214/407 (52%), Gaps = 24/407 (5%)
Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
E F GL + LL K+G + E V+ +M+ R + +L F+ +++
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
++G L+KA +K G+ P V Y ILI GYC+KG I A + +M++ G
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV---AMNLRNEMLQQGCA 442
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
+ VT+NT++ G CK + + A K+F EM + T LI+G C G L A+ L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
+M ++ +VVT N L++GF K ++ A+ ++ D+ + + P+ I+Y+ L++A C
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
+G + +AF + + M+ + + P V N +I G R GN + + ++++ G ++
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW--PNIVTYNVLIKGFCQKGKLEDANGL 494
YN L+ ++ KA L+ KME+E+ P++ TYN ++ GFC++ ++++A +
Sbjct: 623 YNTLIYGFVREENMSKAFGLVK---KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 495 LNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPD 525
L +++E+G+ P+++TY + +EM+++GF PD
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 192/384 (50%), Gaps = 23/384 (5%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR----RIEL--NLDS-----------F 189
K + LS + ++ LV+ G+ D + M RR R+E+ +LDS F
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
+ ++ +A KL +A + ++S G + + N LI + IG + A V+++
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR---IGWVELAWGVYQE 225
Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
+ +G+ N T N +++ CKD + ++ G+ +VTYN+LI+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
++EA L + M G P V T N +ING CK E+A+ +F ++ GLSP TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
L+ CK+G + + + + M R V+PD+ ++ +++ +R GN++ N + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
+ V Y IL+ C+ G A++L +EM ++ ++VTYN ++ G C++ L
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEML---QQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 490 DANGLLNELLEKGLIPNQTTYQIV 513
+A+ L NE+ E+ L P+ T I+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTIL 486
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 144/283 (50%), Gaps = 11/283 (3%)
Query: 84 SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
+ LH K +F+ ++ +L +S + +L+ + K E F++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMT--ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+ ++ V++ N LL K G + + ++ +M + I S++ ++N LC G L
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
+A + ++M S + P V+ N +I GYC+ G ++ + M+ G +P+ +++N
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS---DGESFLEKMISEGFVPDCISYN 624
Query: 264 TLIDGFCKDENISAAM----KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDE 319
TLI GF ++EN+S A K+ EE G G+ V TYNS+++G C ++ EA + +
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQG--GLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 320 MMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
M+ G+ P+ T +INGF + + +A + D++ ++G SP
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
LI + + + + +A F + +G + S+ N LI + + G +E A+ + + G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
V +V T N ++ L ++G +E V ++++ G+ +VTYN L+ A G ++A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
L++ M + P + TYN +I G C+ GK E A + E+L GL P+ TTY+ +
Sbjct: 291 ELMN---AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 515 EEMMEKGFIPDIE 527
E +KG + + E
Sbjct: 348 MEACKKGDVVETE 360
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 240/510 (47%), Gaps = 70/510 (13%)
Query: 36 LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
LF+ D DP L + W ++ R HS+ S L + + NG
Sbjct: 96 LFSLDLDPKTALNFSHWISQNPRYKHSVY----------------SYASLLTLLINNGYV 139
Query: 96 TSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC- 154
V I + DS+ ++D+ + M FE Y L ++ C
Sbjct: 140 GVVFKIRLLMIKSCDSVGDALYVLDL-----CRKMNKDERFEL-----KYKL---IIGCY 186
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
N LL +L + G ++++ VY EM ++ N+ ++N ++NG CK G + +A+ + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
G+ P TY LI GYC++ + +K VF +M G NEV + LI G C
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFK---VFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
I AM +F +M V TY LI LC + EA+ L EM +G+KPN+ T
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED------------ 382
LI+ C + EKAR L + E+GL P+VITYN LI+ YCK G +ED
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 383 ----------------------AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
A + N ML+R VLPDV TYN LI G R GN +
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
+++ + + G+ TY ++ +LCK + ++A L D +E++ PN+V Y LI
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGVNPNVVMYTALID 540
Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
G+C+ GK+++A+ +L ++L K +PN T+
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 236/455 (51%), Gaps = 25/455 (5%)
Query: 68 RLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYV 127
L+H L VA++ I + +FVK T+ + SLC + + L L V
Sbjct: 293 HLIHGLCVARR---IDEAMDLFVKMKDDECFPTV-RTYTVLIKSLCGSERKSEALNL--V 346
Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
K M+ + G+K ++ + L+ +L + KFE + +M + + N+
Sbjct: 347 KEME------------ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
++N ++NG CK G + A D++E M+S +SP TYN LI GYCK ++KA V
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK----SNVHKAMGVL 450
Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
M+E +LP+ VT+N+LIDG C+ N +A ++ M G+ TY S+I+ LC
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
+++EA L D + G+ PNVV ALI+G+CK V++A ++ + + + P+ +T+
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
N LI C +G++++A + M+ G+ P VST LI L ++G+ + + ++++
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
+G + TY + C++G+ A D M KM + P++ TY+ LIKG+ G+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAE---DMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
A +L + + G P+Q T+ + + ++E +
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 212/409 (51%), Gaps = 7/409 (1%)
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
L++ Y + F+ F G + + ++ L+ L + ++ ++ +MK
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
+ ++ ++ LC + + ++A +++++M+ G+ P + TY +LID C + K
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC---KFE 375
Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
KA + M+E G++PN +T+N LI+G+CK I A+ V E M S ++ TYN LI
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
G C + +A+ + ++M+ + P+VVT N+LI+G C+ + A L ++++GL
Sbjct: 436 KGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
P TY ++ID+ CK R+E+A + +S+ +GV P+V Y LI G + G V+ +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
+ ++++ +T+N L+ LC DGK K+A +LL+E KM K P + T +LI
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEE--KMVKIGLQPTVSTDTILIHR 611
Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
+ G + A ++L G P+ TY + +G + D E M
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 228/529 (43%), Gaps = 84/529 (15%)
Query: 69 LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSII---IDMLMLA 125
L+ SL K+ K R L ++ G +V T ++AL + C+ +I +D++ L
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVIT-YNALI---NGYCKRGMIEDAVDVVELM 419
Query: 126 YVKNMKP-----------------HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFE 168
+ + P H + + + V++ N L+ + G F+
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 169 DVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILI 228
+ M R + + ++ +++ LCK+ ++ +A D+ + ++ GV+P VV Y LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 229 DGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
DGYCK G K+ +A + + M+ LPN +TFN LI G C D + A + E+M
Sbjct: 540 DGYCKAG---KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
G+ V T LI+ L DG D A + +M++SG KP+ T I +C++ + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF------------------------ 384
+ + E G+SP + TY++LI Y G+ AF
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 385 -----------------AMRN------------SMLDRGVLPDVSTYNCLIAGLSREGNV 415
AM N M++ V P+ +Y LI G+ GN+
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 416 EGVRNIMNELVNN-GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
+ + + N G+ + +N L+ CK K +A ++D+M + P + +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV---GHLPQLES 833
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
VLI G +KG+ E + LL+ G ++ ++I+ + + ++G +
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 22/315 (6%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
GL+ +V + L+ L+K+G F+ +++M + + ++ + C+ G+L A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
D+M M+ GVSP + TY+ LI GY G +G+ A V K M + G P++ TF +L
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 266 IDGF---------------CKDENI---SAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
I C N+ +++ E+M H + +Y LI G+C
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 308 GKLDEAVALRDEMMAS-GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
G L A + D M + G+ P+ + NAL++ CK K +A + DD+ G P + +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
LI K+G E ++ ++L G D + +I G+ ++G VE + N +
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 427 NNGMRAGLVTYNILV 441
NG + TY++L+
Sbjct: 894 KNGCKFSSQTYSLLI 908
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 159/350 (45%), Gaps = 27/350 (7%)
Query: 152 LSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMED 211
L+ N L+ L +GK ++ + ++M + ++ + + +++ L K G + A +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 212 MKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCK 271
M S G P TY I YC++G ++ A+ + M ENG+ P+ T+++LI G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREG---RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGL---------------CVDG---KLDEA 313
+ A V + M G T+ SLI L C + D
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE-QGLSPSVITYNTLID 372
V L ++M+ + PN + LI G C+ + A +FD + +G+SPS + +N L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
CK + +A + + M+ G LP + + LI GL ++G E ++ L+ G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKG 481
+ + I++ + K G V E+F MEK + TY++LI+G
Sbjct: 865 DELAWKIIIDGVGKQG----LVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 19/226 (8%)
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
+DE K + N L+N + LV++ + ++ ++ E + P++ TYN +++ YCK
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
G +E+A + +++ G+ PD TY LI G + +++ + NE+ G R V
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLN 496
Y L+ LC + +A+ L KM+ ++ +P + TY VLIK C + +A L+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLF---VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 497 ELLEKGLIPNQTTYQIV-------------RE---EMMEKGFIPDI 526
E+ E G+ PN TY ++ RE +M+EKG +P++
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 16/290 (5%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
+ F++ G K + ++ +EG+ D E + +M+ + +L +++ ++
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG-----YCKKGG-------IGKMYK 242
G G+ N A D+++ M+ G P T+ LI Y K+ G + M +
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 243 ADAV---FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMG-SHGIAAGVVTYN 298
D V + MVE+ + PN ++ LI G C+ N+ A KVF+ M + GI+ + +N
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
+L++ C K +EA + D+M+ G P + + LI G KK E+ +F ++ +
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
G + + +ID K+G +E + + N M G TY+ LI G
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 206/376 (54%), Gaps = 6/376 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + +++ ++ L K G + + K+M++ +IE + +N +++ LC +N A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ +M + G+ P VVTYN LI C G+ A + DM+E I PN VTF+ L
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCN---YGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+++EM I + TY+SLING C+ +LDEA + + M++
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PNVVT N LI GFCK K V++ LF ++S++GL + +TY TLI + + ++A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ GVLPD+ TY+ L+ GL G VE + L + M + TYNI++ +C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK + D + + PN+VTY ++ GFC+KG E+A+ L E+ E+G +P
Sbjct: 513 KAGKVEDG---WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 506 NQTTYQIVREEMMEKG 521
+ TY + + G
Sbjct: 570 DSGTYNTLIRAHLRDG 585
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 211/394 (53%), Gaps = 24/394 (6%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++LL A+ K KF+ V + ++M+ I NL +++ ++N C+ +L+ A ++
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT N L++G+C I A ++ MVE G P+ TFNTLI G
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRIS---DAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
+ S A+ + + M G +VTY ++NGLC G +D A++L +M ++P V
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+ C K V A LF ++ +G+ P+V+TYN+LI C GR DA + +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M++R + P+V T++ LI +EG + + +E++ + + TY+ L+ C +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+A MF++ K +PN+VTYN LIKGFC+ ++++ L E+ ++GL+ N
Sbjct: 377 LDEA----KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 509 TY----------------QIVREEMMEKGFIPDI 526
TY QIV ++M+ G +PDI
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 243/494 (49%), Gaps = 50/494 (10%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
L +V ++ +P I F L K KF V ++ + S +L SI+I+
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN--- 124
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + + L + G + +++ N LL + D + +M +
Sbjct: 125 -CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
+ +FN +++GL + + ++A +++ M G P +VTY I+++G CK+G I A
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID---LA 240
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
++ K M + I P V +NT+ID C +N++ A+ +F EM + GI VVTYNSLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 304 LC-----------------------------------VDGKLDEAVALRDEMMASGLKPN 328
LC +GKL EA L DEM+ + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
+ T ++LINGFC +++A+ +F+ + + P+V+TYNTLI +CK R+++ +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
M RG++ + TY LI G + + + + ++V++G+ ++TY+IL+ LC +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
K + A+ + + +++ K P+I TYN++I+G C+ GK+ED L L KG+ PN
Sbjct: 481 KVETALVVFE---YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 509 TYQIVREEMMEKGF 522
TY + KG
Sbjct: 538 TYTTMMSGFCRKGL 551
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 177/322 (54%), Gaps = 3/322 (0%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F + G++ +V++ N L+R L G++ D + +M R+I N+ +F+ +++ K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
GKL +A + ++M + P + TY+ LI+G+C ++ +A +F+ M+ PN
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 395
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
VT+NTLI GFCK + + M++F EM G+ VTY +LI+G + D A +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
+M++ G+ P+++T + L++G C VE A V+F+ + + P + TYN +I+ CK G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
++ED + + S+ +GV P+V TY +++G R+G E + E+ G TYN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
L+ A +DG + L+ EM
Sbjct: 576 TLIRAHLRDGDKAASAELIREM 597
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 33/302 (10%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ + L+ A VKEGK + E +Y EM +R I+ ++ +++ ++NG C +L++A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCK----------------KGGIGKMY--------- 241
+ E M S P VVTYN LI G+CK +G +G
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 242 -------KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
A VFK MV +G+LP+ +T++ L+DG C + + A+ VFE + + +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
TYN +I G+C GK+++ L + G+KPNVVT +++GFC+K L E+A LF +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ E+G P TYNTLI A+ ++G + + M + D ST L+ + +G
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGR 620
Query: 415 VE 416
++
Sbjct: 621 LD 622
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 272 DENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
D + A+ +F +M +V ++ L++ + K D ++L ++M G+ N+ T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 332 SNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
+ LIN FC++ + A + + + G P ++T N+L++ +C R+ DA ++ M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
+ G PD T+N LI GL R +++ +V G + LVTY I+V LCK G
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
A+SLL KME+ K P +V YN +I C + DA L E+ KG+ PN TY
Sbjct: 239 LALSLLK---KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 219/386 (56%), Gaps = 9/386 (2%)
Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
Y +N K G+E F + G+ + + N+LLR L K+G ++ E + ++ +R + N
Sbjct: 192 YEENFKAE-GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA 245
L ++N + GLC+ G+L+ A ++ + G P V+TYN LI G CK K +A+
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN---SKFQEAEV 307
Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
MV G+ P+ T+NTLI G+CK + A ++ + +G TY SLI+GLC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
+G+ + A+AL +E + G+KPNV+ N LI G + ++ +A L +++SE+GL P V
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
T+N L++ CK G + DA + M+ +G PD+ T+N LI G S + +E I++ +
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKW-PNIVTYNVLIKGFCQ 484
++NG+ + TYN L+ LCK K + + E +K EK PN+ T+N+L++ C+
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVM----ETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 485 KGKLEDANGLLNELLEKGLIPNQTTY 510
KL++A GLL E+ K + P+ T+
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 227/511 (44%), Gaps = 72/511 (14%)
Query: 42 DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTI 101
DP+ L F KE+ H+L RS + GKF ++ +
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTL----------------STYRSVIEKLGYYGKFEAMEEV 62
Query: 102 FHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH-------LGFEAFKRAGDYGLKSSVLSC 154
+ R ++ ML YV MK + F+R Y + +V S
Sbjct: 63 LVDM--------RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
N ++ LV G F+ VY M+ R I ++ SF + CK + + A ++ +M S
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 215 LGVSPKVVTYNILIDGY-----------------------------------CKKGGIGK 239
G VV Y ++ G+ CKKG +
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK- 233
Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
+ + + +++ G+LPN T+N I G C+ + A+++ + G V+TYN+
Sbjct: 234 --ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
LI GLC + K EA +M+ GL+P+ T N LI G+CK +V+ A + D G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
P TY +LID C EG A A+ N L +G+ P+V YN LI GLS +G +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
+ NE+ G+ + T+NILV LCK G A L+ M + +P+I T+N+LI
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI---SKGYFPDIFTFNILI 468
Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
G+ + K+E+A +L+ +L+ G+ P+ TY
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 170/325 (52%), Gaps = 4/325 (1%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F A G+K +V+ N L++ L +G + + EM + + + +FN ++NGLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
G ++ A +++ M S G P + T+NILI GY + KM A + M++NG+ P+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL---KMENALEILDVMLDNGVDPD 495
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
T+N+L++G CK M+ ++ M G A + T+N L+ LC KLDEA+ L +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ-GLSPSVITYNTLIDAYCKE 377
EM + P+ VT LI+GFCK ++ A LF + E +S S TYN +I A+ ++
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615
Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
+ A + M+DR + PD TY ++ G + GNV + E++ NG L T
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Query: 438 NILVGALCKDGKSKKAVSLLDEMFK 462
++ LC + + +A ++ M +
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 186/400 (46%), Gaps = 25/400 (6%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDS-FNFVLNGLCKAGKLNK 204
G K ++ + ++ L GKFE +E V +M+ L+ + + + GK+ +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
A ++ E M P V +YN ++ G + +K V+ M + GI P+ +F
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK---VYMRMRDRGITPDVYSFTI 151
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
+ FCK AA+++ M S G VV Y +++ G + E L +M+ASG
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
+ + T N L+ CKK V++ L D + ++G+ P++ TYN I C+ G ++ A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
M ++++G PDV TYN LI GL + + + ++VN G+ TYN L+
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 445 CKDGKSKKAVSLL-DEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
CK G + A ++ D +F P+ TY LI G C +G+ A L NE L KG+
Sbjct: 332 CKGGMVQLAERIVGDAVFN----GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 504 IPNQTTYQI----------------VREEMMEKGFIPDIE 527
PN Y + EM EKG IP+++
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
++L+ Y +K E D G+ V + N LL L K KFEDV YK M
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG 238
+ NL +FN +L LC+ KL++A ++E+MK+ V+P VT+ LIDG+CK G +
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 239 KMYKADAVFKDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTY 297
Y +F+ M E + + T+N +I F + N++ A K+F+EM + TY
Sbjct: 584 GAY---TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 298 NSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISE 357
+++G C G ++ EMM +G P++ T +IN C + V +A + + +
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 358 QGLSPSVITYNTLIDAYCKE 377
+GL P + NT+ D KE
Sbjct: 701 KGLVPEAV--NTICDVDKKE 718
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSML-DRGVLPDVSTYNCLIAGLSREGNVEGV 418
+ P ++ + C++ M+ A M NSM + G +STY +I L G E +
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMK-ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 419 RNI---MNELVNNGMRAGLVTYNILVGAL---CKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
+ M E V N M G + VGA+ + GK ++AV++ + M + E P +
Sbjct: 60 EEVLVDMRENVGNHMLEG-----VYVGAMKNYGRKGKVQEAVNVFERMDFYDCE---PTV 111
Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
+YN ++ G + A+ + + ++G+ P+ ++ I
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 203/376 (53%), Gaps = 6/376 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + + + ++ L K G + + K+M++ +IE ++ + +++ LC +N A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ +M + G+ P VVTYN LI C G+ A + DM+E I PN VTF+ L
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLC---NYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+++EM I + TY+SLING C+ +LDEA + + M++
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PNVVT N LI GFCK K VE+ LF ++S++GL + +TYNTLI + G + A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ GV PD+ TY+ L+ GL + G +E + L + M + TYNI++ +C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK + D + + PN++ Y +I GFC+KG E+A+ L E+ E G +P
Sbjct: 512 KAGKVEDG---WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 506 NQTTYQIVREEMMEKG 521
N TY + + G
Sbjct: 569 NSGTYNTLIRARLRDG 584
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 181/322 (56%), Gaps = 3/322 (0%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F + G++ +V++ N L+R L G++ D + +M R+I N+ +F+ +++ K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
GKL +A + ++M + P + TY+ LI+G+C ++ +A +F+ M+ PN
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 394
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
VT+NTLI GFCK + + M++F EM G+ VTYN+LI GL G D A +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
+M++ G+ P+++T + L++G CK +EKA V+F+ + + + P + TYN +I+ CK G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
++ED + + S+ +GV P+V Y +I+G R+G E + E+ +G TYN
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
L+ A +DG + L+ EM
Sbjct: 575 TLIRARLRDGDKAASAELIKEM 596
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 246/498 (49%), Gaps = 21/498 (4%)
Query: 41 ADPVLILR--YFCWSTKELRA--SHSLLLTGRL------LHSLVVAKKYPKIRSF---LH 87
A P+ LR YF ++ + R S ++LL +L +V ++ P I F L
Sbjct: 29 ASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLS 88
Query: 88 MFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGL 147
K KF V ++ + S S ++L+ + + + L + G
Sbjct: 89 AIAKMNKFDLVISLGERMQNLRISYDLYSY--NILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
+ +++ + LL + + + +M + N +FN +++GL K ++A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
+++ M + G P + TY +++G CK+G I A ++ K M + I + V + T+ID
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL---ALSLLKKMEKGKIEADVVIYTTIID 263
Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
C +N++ A+ +F EM + GI VVTYNSLI LC G+ +A L +M+ + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
NVVT +ALI+ F K+ + +A L+D++ ++ + P + TY++LI+ +C R+++A M
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
M+ + P+V TYN LI G + VE + E+ G+ VTYN L+ L +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
G A + KM + P+I+TY++L+ G C+ GKLE A + L + + P+
Sbjct: 444 GDCDMAQKIFK---KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 508 TTYQIVREEMMEKGFIPD 525
TY I+ E M + G + D
Sbjct: 501 YTYNIMIEGMCKAGKVED 518
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 182/307 (59%), Gaps = 4/307 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ + L+ A VKEGK + E +Y EM +R I+ ++ +++ ++NG C +L++A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ E M S P VVTYN LI G+CK ++ + +F++M + G++ N VT+NTLI
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
G + + A K+F++M S G+ ++TY+ L++GLC GKL++A+ + + + S ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
P++ T N +I G CK VE LF +S +G+ P+VI Y T+I +C++G E+A A+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
M + G LP+ TYN LI R+G+ ++ E+ + G T ++++ L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616
Query: 447 DGKSKKA 453
DG+ +K+
Sbjct: 617 DGRLEKS 623
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 159/289 (55%), Gaps = 3/289 (1%)
Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
K+ A +F +MV++ LP+ V FN L+ K + + E M + I+ + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
LIN C +L A+A+ +MM G +P++VT ++L+NG+C K + +A L D +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
P+ +T+NTLI + +A A+ + M+ RG PD+ TY ++ GL + G+++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
+++ ++ + A +V Y ++ ALC A++L EM + + PN+VTYN L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGIRPNVVTYNSL 296
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
I+ C G+ DA+ LL++++E+ + PN T+ + + +++G + + E
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
G++ F G+K +V+ ++ ++G E+ + +++EMK N ++N ++
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 195 GLCKAGKLNKASDIMEDMKSLG----VSPKVVTYNILIDGYCKK 234
+ G +++++++M+S G S + N+L DG +K
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEK 622
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 195/365 (53%), Gaps = 6/365 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + S+++ LL + +F++ + M N+ +N V+NGLCK LN A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ M+ G+ VTYN LI G G + A + +DMV+ I PN + F L
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSG---RWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ N+ A +++EM + V TYNSLING C+ G L +A + D M++ G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
P+VVT N LI GFCK K VE LF +++ QGL TYNTLI YC+ G++ A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ N M+D GV PD+ TYN L+ L G +E ++ +L + M ++TYNI++ LC
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
+ K K+A L + ++ P+ + Y +I G C+KG +A+ L + E G +P
Sbjct: 441 RTDKLKEAWCLFRS---LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 506 NQTTY 510
++ Y
Sbjct: 498 SERIY 502
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 218/408 (53%), Gaps = 41/408 (10%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++L + K KF+ V Y+Y +M+ I +L SF +++ C+ +L+ A ++
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT L++G+C+ + +A ++ M G +PN V +NT+I+G
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGN---RFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL-DEAVALRD---------- 318
CK+ +++ A++VF M GI A VTYN+LI+GL G+ D A LRD
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 319 ------------------------EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
EM+ + PNV T N+LINGFC + A+ +FD
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ +G P V+TYNTLI +CK R+ED + M +G++ D TYN LI G + G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
+ + + N +V+ G+ +VTYNIL+ LC +GK +KA+ +++++ K E + +I+T
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD---VDIIT 431
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
YN++I+G C+ KL++A L L KG+ P+ Y + + KG
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 6/358 (1%)
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
KF+D ++ EM + R ++ F VL + K K + + M++LG+S + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
ILI +C+ ++ A A+ M++ G P+ VT +L++GFC+ A+ + + M
Sbjct: 119 ILIHCFCR---CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G VV YN++INGLC + L+ A+ + M G++ + VT N LI+G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
A L D+ ++ + P+VI + LID + KEG + +A + M+ R V+P+V TYN L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
I G G + + + + +V+ G +VTYN L+ CK + + + L EM
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM---TY 352
Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
+ + TYN LI G+CQ GKL A + N +++ G+ P+ TY I+ + + G I
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 3/257 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V+ L+ VKEG + +YKEM RR + N+ ++N ++NG C G L A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ + M S G P VVTYN LI G+CK + K +F +M G++ + T+NTLI
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK---LFCEMTYQGLVGDAFTYNTLI 366
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
G+C+ ++ A KVF M G++ +VTYN L++ LC +GK+++A+ + +++ S +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
+++T N +I G C+ +++A LF ++ +G+ P I Y T+I C++G +A +
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 387 RNSMLDRGVLPDVSTYN 403
M + G +P Y+
Sbjct: 487 CRRMKEDGFMPSERIYD 503
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 57/302 (18%)
Query: 49 YFCWSTKELRA---SHSLLLTG-----------RLLHSLVVAKKYPKIRSF---LHMFVK 91
++C K +RA +++ L++G RLL +V K P + F + FVK
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 92 NGKFTSVSTIFHAL---STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
G ++ + S + NS+I + + + K K G
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK-----GCF 321
Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
V++ N L+ K + ED ++ EM + + + ++N +++G C+AGKLN A +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGI------------------------------- 237
M GVSP +VTYNIL+D C G I
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 238 -GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
K+ +A +F+ + G+ P+ + + T+I G C+ A K+ M G
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 297 YN 298
Y+
Sbjct: 502 YD 503
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 207/376 (55%), Gaps = 6/376 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + +++ ++ L K G + + K+M++ +IE ++ +N +++GLCK ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ +M + G+ P V TY+ LI C G+ A + DM+E I PN VTF+ L
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCN---YGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+++EM I + TY+SLING C+ +LDEA + + M++
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PNVVT + LI GFCK K VE+ LF ++S++GL + +TY TLI + + ++A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ GV P++ TYN L+ GL + G + + L + M + TYNI++ +C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK + L + + PN++ YN +I GFC+KG E+A+ LL ++ E G +P
Sbjct: 515 KAGKVEDGWELF---CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 506 NQTTYQIVREEMMEKG 521
N TY + + G
Sbjct: 572 NSGTYNTLIRARLRDG 587
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 213/401 (53%), Gaps = 26/401 (6%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ N+LL A+ K KFE V + ++M+ I +L +++ +N C+ +L+ A ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I A A+ MVE G P+ TF TLI G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRIS---DAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S A+ + ++M G +VTY +++NGLC G +D A++L +M ++ +V
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+G CK K ++ A LF ++ +G+ P V TY++LI C GR DA + +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M++R + P+V T++ LI +EG + + +E++ + + TY+ L+ C +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+A MF++ K +PN+VTY+ LIKGFC+ ++E+ L E+ ++GL+ N
Sbjct: 379 LDEA----KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 509 TY----------------QIVREEMMEKGFIPDIEGHMYNI 533
TY Q+V ++M+ G P+I YNI
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI--LTYNI 473
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 193/348 (55%), Gaps = 6/348 (1%)
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
K +D ++ +M + R ++ FN +L+ + K K + E M++LG+S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
I I+ +C++ ++ A AV M++ G P+ VT ++L++G+C + IS A+ + ++M
Sbjct: 123 IFINCFCRRS---QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G T+ +LI+GL + K EAVAL D+M+ G +P++VT ++NG CK+ +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
+ A L + + + V+ YNT+ID CK M+DA + M ++G+ PDV TY+ L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
I+ L G ++++++ + +VT++ L+ A K+GK +A L DEM K
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
+ P+I TY+ LI GFC +L++A + ++ K PN TY +
Sbjct: 360 D---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 15/462 (3%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
L +V ++ +P I F L K KF V ++ + T S L SI I+
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN--- 126
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + + L + G + +++ + LL + D + +M +
Sbjct: 127 -CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
+ +F +++GL K ++A +++ M G P +VTY +++G CK+G I A
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL---A 242
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
++ K M + I + V +NT+IDG CK +++ A+ +F EM + GI V TY+SLI+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
LC G+ +A L +M+ + PNVVT +ALI+ F K+ + +A L+D++ ++ + P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
+ TY++LI+ +C R+++A M M+ + P+V TY+ LI G + VE +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
E+ G+ VTY L+ + A + +M + PNI+TYN+L+ G C
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH---PNILTYNILLDGLC 479
Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+ GKL A + L + P+ TY I+ E M + G + D
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 179/322 (55%), Gaps = 3/322 (0%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F + G++ V + + L+ L G++ D + +M R+I N+ +F+ +++ K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
GKL +A + ++M + P + TY+ LI+G+C ++ +A +F+ M+ PN
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDEAKHMFELMISKDCFPN 397
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
VT++TLI GFCK + + M++F EM G+ VTY +LI+G D A +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
+M++ G+ PN++T N L++G CK + KA V+F+ + + P + TYN +I+ CK G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
++ED + + ++ +GV P+V YN +I+G R+G+ E +++ ++ +G TYN
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
L+ A +DG + + L+ EM
Sbjct: 578 TLIRARLRDGDREASAELIKEM 599
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 186/312 (59%), Gaps = 6/312 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ + L+ A VKEGK + E +Y EM +R I+ ++ +++ ++NG C +L++A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ E M S P VVTY+ LI G+CK ++ + +F++M + G++ N VT+ TLI
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
GF + + A VF++M S G+ ++TYN L++GLC +GKL +A+ + + + S ++
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
P++ T N +I G CK VE LF ++S +G+SP+VI YNT+I +C++G E+A ++
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
M + G LP+ TYN LI R+G+ E ++ E+ + G AG + LV +
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLH 619
Query: 447 DGKSKKAVSLLD 458
DG+ K S LD
Sbjct: 620 DGRLDK--SFLD 629
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
DAV F DMV++ P+ V FN L+ K + + E+M + GI+ + TY+ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
N C +L A+A+ +MM G +P++VT ++L+NG+C K + A L D + E G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
P T+ TLI + +A A+ + M+ RG PD+ TY ++ GL + G+++ ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
+ ++ + A +V YN ++ LCK A++L EM + + P++ TY+ LI
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM---DNKGIRPDVFTYSSLISC 302
Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
C G+ DA+ LL++++E+ + PN T+ + + +++G + + E
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHAL--STCSDSLCRNSIIIDMLM 123
+ +V +P I ++ L KNGK +F L ST + +I+I+
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE--- 511
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
K K G+E F G+ +V++ N ++ ++G E+ + + K+MK
Sbjct: 512 -GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY----NILIDGYCKK 234
N ++N ++ + G +++++++M+S G + T N+L DG K
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 625
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 238/493 (48%), Gaps = 25/493 (5%)
Query: 34 LQLFNSDADPVLILRYFCWSTKELRASHSLLLTG----------RLLHSLVVAKKYPKIR 83
LQ+ N L L FC+ + + +L G L +V ++ P I
Sbjct: 25 LQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSII 84
Query: 84 SF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLMLAYVKNMKPHLGFEA 138
F L + K ++ V ++F + LC +I++ + L+ +P
Sbjct: 85 DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLS----SQPCRASCF 140
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
+ G + +++ LL + ED ++ ++ + N+ ++ ++ LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
LN A ++ M + G P VVTYN L+ G C+ IG+ A + +DM++ I PN
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE---IGRWGDAAWLLRDMMKRRIEPN 257
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
+TF LID F K + A +++ M + V TY SLINGLC+ G LDEA +
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
M +G PN V LI+GFCK K VE +F ++S++G+ + ITY LI YC G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
R + A + N M R PD+ TYN L+ GL G VE I + M +VTY
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
I++ +CK GK + A L +F K K PN++TY +I GFC++G + +A+ L ++
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLF--SKGMK-PNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 499 LEKGLIPNQTTYQ 511
E G +PN++ Y+
Sbjct: 495 KEDGFLPNESVYK 507
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 220/436 (50%), Gaps = 41/436 (9%)
Query: 127 VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNL 186
+ N++ + + F R S++ +LL + K +++ V ++++M+ I L
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118
Query: 187 DSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
+ N V++ +C + + +AS + M LG P +VT+ L++GYC ++ A A+
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN---RIEDAIAL 175
Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
F ++ G PN VT+ TLI CK+ +++ A+++F +MG++G VVTYN+L+ GLC
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALI------------------------------ 336
G+ +A L +MM ++PNV+T ALI
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 337 -----NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
NG C L+++AR +F + G P+ + Y TLI +CK R+ED + M
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
+GV+ + TY LI G G + + + N++ + + TYN+L+ LC +GK +
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
KA+ + + M K E + NIVTY ++I+G C+ GK+EDA L L KG+ PN TY
Sbjct: 416 KALMIFEYMRKREMDI---NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 512 IVREEMMEKGFIPDIE 527
+ +G I + +
Sbjct: 473 TMISGFCRRGLIHEAD 488
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 261/533 (48%), Gaps = 64/533 (12%)
Query: 43 PVLILRYFCW---STKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVS 99
P ++ +F W S E S S L ++ SL+ K+ +S L +++
Sbjct: 55 PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSD----- 109
Query: 100 TIFHALSTCSDSLCRN--------SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSV 151
+LS C+ L N + D+ + AY+ KPH+ + F++ LK ++
Sbjct: 110 ---ASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL 166
Query: 152 LSCNQLLRALVK---EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
L+CN LL LV+ V+ +M + + LN+ +FN ++NG C GKL A +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226
Query: 209 MEDMKS-LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
+E M S V+P VTYN ++ KKG + + + + DM +NG++PN VT+N L+
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE---LLLDMKKNGLVPNRVTYNNLVY 283
Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
G+CK ++ A ++ E M + + TYN LINGLC G + E + L D M + L+P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
+VVT N LI+G + L +AR L + + G+ + +T+N + CKE + E
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 388 NSMLD-RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
++D G PD+ TY+ LI + G++ G +M E+ G++ +T N ++ ALCK
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 447 DGKSKKAVSLL----------DEM---------FKMEKEKK----W---------PNIVT 474
+ K +A +LL DE+ F+ EK +K W P + T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV-----REEMMEKGF 522
+N LI G C GK E A +EL E GL+P+ +T+ + +E +EK F
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
GL + ++ N L+ K G ++ + + MK+ + +L ++N ++NGLC AG + +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIG--------------------------- 238
++M+ MKSL + P VVTYN LIDG C + G+
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 239 ---KMYKADAVFKDMVE----NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
K K +AV + + E +G P+ VT++TLI + K ++S A+++ EMG GI
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
+T N++++ LC + KLDEA L + G + VT LI GF +++ VEKA +
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
+D++ + ++P+V T+N+LI C G+ E A + + + G+LPD ST+N +I G +
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
EG VE NE + + + T NIL+ LCK+G ++KA++ + + E++ +
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI----EEREVD 624
Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
VTYN +I FC+ KL++A LL+E+ EKGL P++ TY +ME G + + + +
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Query: 532 NISG 535
SG
Sbjct: 685 KFSG 688
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 60/318 (18%)
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
L+ AY+K E + G G+K + ++ N +L AL KE K ++ + +R
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
++ ++ ++ G + K+ KA ++ ++MK + ++P V T+N LI G C G K
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG---KTE 538
Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI----------- 290
A F ++ E+G+LP++ TFN++I G+CK+ + A + + E H
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 291 -----------------------AAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
VTYN++I+ C D KL EA L EM GL+P
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 328 NVVTSNALIN----------------------GFCKKKL-VEKARVLFDDISEQGLSPSV 364
+ T N+ I+ G K+ L VE + S++ L+
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEA 718
Query: 365 ITYNTLIDAYCKEGRMED 382
I Y+ +ID C GR+++
Sbjct: 719 IAYSDVIDELCSRGRLKE 736
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 42/170 (24%)
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR---EGNVEGV 418
PS ++ + AY EG+ A + M+ + P++ T N L+ GL R ++
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
R + +++V G VSL N+ T+NVL
Sbjct: 189 REVFDDMVKIG------------------------VSL--------------NVQTFNVL 210
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLI-PNQTTYQIVREEMMEKGFIPDIE 527
+ G+C +GKLEDA G+L ++ + + P+ TY + + M +KG + D++
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 206/373 (55%), Gaps = 8/373 (2%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ N+LL A+ K KFE V + ++M+ I +L +++ +N C+ +L+ A ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I A A+ MVE G P+ TF TLI G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRIS---DAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S A+ + ++M G +VTY +++NGLC G +D A+ L ++M A+ +K NV
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+ CK + VE A LF ++ +G+ P+V+TYN+LI+ C GR DA + ++
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
ML++ + P+V T+N LI +EG + + E++ + +TYN+L+ C +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+A +MFK M + PNI TYN LI GFC+ ++ED L E+ ++GL+ N
Sbjct: 379 LDEA----KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 509 TYQIVREEMMEKG 521
TY + + + G
Sbjct: 435 TYTTIIQGFFQAG 447
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 203/396 (51%), Gaps = 25/396 (6%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + +++ ++ L K G + + +M+ RI+ N+ FN +++ LCK + A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
D+ +M++ G+ P VVTYN LI+ C G+ A + +M+E I PN VTFN L
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLC---NYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+ EEM I +TYN LING C+ +LDEA + M++
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PN+ T N LINGFCK K VE LF ++S++GL + +TY T+I + + G + A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ V D+ TY+ L+ GL G ++ I L + M + YN ++ +C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK +A L + P++VTYN +I G C K L++A+ L ++ E G +P
Sbjct: 515 KAGKVGEAWDLFCSL------SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 506 NQTTYQ-IVR---------------EEMMEKGFIPD 525
N TY ++R +EM GF+ D
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
N +I + ++ + K + + F G++ +V++ N L+ L G++ D +
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
M ++I N+ +FN +++ K GKL +A + E+M + P +TYN+LI+G+C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
++ +A +FK MV LPN T+NTLI+GFCK + + +++F EM G+
Sbjct: 377 ---NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
VTY ++I G G D A + +M+++ + +++T + L++G C ++ A V+F
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ + + ++ YNT+I+ CK G++ +A+ + S+ + PDV TYN +I+GL +
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
++ ++ ++ +G TYN L+ A +D + L+ EM
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 3/291 (1%)
Query: 237 IGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVT 296
I K+ A +F DMV++ P+ V FN L+ K + + E+M + GI+ + T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 297 YNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS 356
Y+ IN C +L A+A+ +MM G +P++VT ++L+NG+C K + A L D +
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 357 EQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE 416
E G P T+ TLI + +A A+ + M+ RG PD+ TY ++ GL + G+++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 417 GVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYN 476
N++N++ ++A +V +N ++ +LCK + AV L E ME + PN+VTYN
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE---METKGIRPNVVTYN 297
Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
LI C G+ DA+ LL+ +LEK + PN T+ + + ++G + + E
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 171/307 (55%), Gaps = 7/307 (2%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ N L+ A KEGK + E +++EM +R I+ + ++N ++NG C +L++A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ + M S P + TYN LI+G+CK ++ +F++M + G++ N VT+ T+I
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCK---CKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
GF + + +A VF++M S+ + ++TY+ L++GLC GKLD A+ + + S ++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
N+ N +I G CK V +A LF +S + P V+TYNT+I C + +++A +
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
M + G LP+ TYN LI R+ + ++ E+ ++G T + LV +
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLH 616
Query: 447 DGKSKKA 453
DG+ K+
Sbjct: 617 DGRLDKS 623
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 209/376 (55%), Gaps = 6/376 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + + ++ N L+ L K + + M + + +L ++ V+NGLCK G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+++ M+ + P V+ YN +IDG CK M A +FK+M GI PN VT+++L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCK---YKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
I C S A ++ +M I V T+++LI+ +GKL EA L DEM+ +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
P++VT ++LINGFC +++A+ +F+ + + P V+TYNTLI +CK R+E+
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M RG++ + TYN LI GL + G+ + + I E+V++G+ ++TYN L+ LC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K+GK +KA+ + + +++ K P I TYN++I+G C+ GK+ED L L KG+ P
Sbjct: 478 KNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 506 NQTTYQIVREEMMEKG 521
+ Y + KG
Sbjct: 535 DVVAYNTMISGFCRKG 550
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 206/373 (55%), Gaps = 8/373 (2%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++LL A+ K KF+ V + ++M+ I N +++ ++N C+ +L A ++
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I +A A+ M G PN VTFNTLI G
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRIS---EAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S AM + + M + G +VTY ++NGLC G D A L ++M L+P V
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
+ N +I+G CK K ++ A LF ++ +G+ P+V+TY++LI C GR DA + +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M++R + PDV T++ LI +EG + + +E+V + +VTY+ L+ C +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+A +MF+ M + +P++VTYN LIKGFC+ ++E+ + E+ ++GL+ N
Sbjct: 377 LDEA----KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 509 TYQIVREEMMEKG 521
TY I+ + + + G
Sbjct: 433 TYNILIQGLFQAG 445
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 238/473 (50%), Gaps = 15/473 (3%)
Query: 56 ELRASHSLLLTGRLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSL 112
EL+ ++ L G ++ S + +P I F L K KF V ++ + +
Sbjct: 59 ELKLDDAVALFGEMVKS----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--I 112
Query: 113 CRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY 172
N +L+ + + + L + G + ++++ + LL + +
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 173 VYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYC 232
+ +M + N +FN +++GL K ++A +++ M + G P +VTY ++++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 233 KKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAA 292
K+G + + M + + P + +NT+IDG CK +++ A+ +F+EM + GI
Sbjct: 233 KRGDTDLAFN---LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
VVTY+SLI+ LC G+ +A L +M+ + P+V T +ALI+ F K+ + +A L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
D++ ++ + PS++TY++LI+ +C R+++A M M+ + PDV TYN LI G +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
VE + E+ G+ VTYNIL+ L + G A + EM + PNI
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS---DGVPPNI 466
Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+TYN L+ G C+ GKLE A + L + P TY I+ E M + G + D
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 182/322 (56%), Gaps = 3/322 (0%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
FK G++ +V++ + L+ L G++ D + +M R+I ++ +F+ +++ K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPN 258
GKL +A + ++M + P +VTY+ LI+G+C ++ +A +F+ MV P+
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD---RLDEAKQMFEFMVSKHCFPD 395
Query: 259 EVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRD 318
VT+NTLI GFCK + + M+VF EM G+ VTYN LI GL G D A +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 319 EMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG 378
EM++ G+ PN++T N L++G CK +EKA V+F+ + + P++ TYN +I+ CK G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
++ED + + ++ +GV PDV YN +I+G R+G+ E + E+ +G YN
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 439 ILVGALCKDGKSKKAVSLLDEM 460
L+ A +DG + + L+ EM
Sbjct: 576 TLIRARLRDGDREASAELIKEM 597
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 206/380 (54%), Gaps = 6/380 (1%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
L F + L+ VL N ++ L K +D ++KEM+ + I N+ +++ ++
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
+ LC G+ + AS ++ DM ++P V T++ LID + K+ GK+ +A+ ++ +MV+
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE---GKLVEAEKLYDEMVKR 355
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
I P+ VT+++LI+GFC + + A ++FE M S VVTYN+LI G C +++E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
+ + EM GL N VT N LI G + + A+ +F ++ G+ P+++TYNTL+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
CK G++E A + + + P + TYN +I G+ + G VE ++ L G++
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
+V YN ++ C+ G ++A +L E M+++ PN YN LI+ + G E +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKE---MKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 494 LLNELLEKGLIPNQTTYQIV 513
L+ E+ G + +T +V
Sbjct: 593 LIKEMRSCGFAGDASTIGLV 612
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 182/312 (58%), Gaps = 6/312 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ V + + L+ A VKEGK + E +Y EM +R I+ ++ +++ ++NG C +L++A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ E M S P VVTYN LI G+CK ++ + VF++M + G++ N VT+N LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
G + + A ++F+EM S G+ ++TYN+L++GLC +GKL++A+ + + + S ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
P + T N +I G CK VE LF ++S +G+ P V+ YNT+I +C++G E+A A+
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
M + G LP+ YN LI R+G+ E ++ E+ + G AG + LV +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGLVTNMLH 617
Query: 447 DGKSKKAVSLLD 458
DG+ K S LD
Sbjct: 618 DGRLDK--SFLD 627
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 3/289 (1%)
Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
K+ A A+F +MV++ P+ + F+ L+ K + + E+M + GI TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
LIN C +L A+A+ +MM G +PN+VT ++L+NG+C K + +A L D +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
G P+ +T+NTLI + +A A+ + M+ +G PD+ TY ++ GL + G+ +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
N++N++ + G++ YN ++ LCK A++L EM E + PN+VTY+ L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKGIRPNVVTYSSL 297
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
I C G+ DA+ LL++++E+ + P+ T+ + + +++G + + E
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 206/374 (55%), Gaps = 7/374 (1%)
Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEM-KRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
K ++ N L+ V G+ +D + V +M I ++ ++N ++ G K G + A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+++ DM++ G P V +Y IL+DG+CK G I + Y V +M +G+ PN V FN LI
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN---VLNEMSADGLKPNTVGFNCLI 466
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
FCK+ I A+++F EM G V T+NSLI+GLC ++ A+ L +M++ G+
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
N VT N LIN F ++ +++AR L +++ QG ITYN+LI C+ G ++ A ++
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
ML G P + N LI GL R G VE E+V G +VT+N L+ LC+
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
G+ + +++ K++ E P+ VT+N L+ C+ G + DA LL+E +E G +PN
Sbjct: 647 AGRIEDGLTMFR---KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 507 QTTYQIVREEMMEK 520
T+ I+ + ++ +
Sbjct: 704 HRTWSILLQSIIPQ 717
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 227/442 (51%), Gaps = 25/442 (5%)
Query: 99 STIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH----LGFEAFKRAGD---------- 144
T+ H+LS C+ ++ +M ++ V + + LG F R +
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
G ++ L+ L K G+ + + ++ + + I + FN +++G G+L+
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDD 371
Query: 205 ASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
A ++ DM S G+ P V TYN LI GY K+G +G A V DM G PN ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL---ALEVLHDMRNKGCKPNVYSYT 428
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
L+DGFCK I A V EM + G+ V +N LI+ C + ++ EAV + EM
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
G KP+V T N+LI+G C+ ++ A L D+ +G+ + +TYNTLI+A+ + G +++A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
+ N M+ +G D TYN LI GL R G V+ R++ +++ +G ++ NIL+
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
LC+ G ++AV EM P+IVT+N LI G C+ G++ED + +L +G+
Sbjct: 609 LCRSGMVEEAVEFQKEMVL---RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 504 IPNQTTYQIVREEMMEKGFIPD 525
P+ T+ + + + GF+ D
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYD 687
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 191/345 (55%), Gaps = 6/345 (1%)
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
YG+ V + N L+ KEG V +M+ + + N+ S+ +++G CK GK+++
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
A +++ +M + G+ P V +N LI +CK+ ++ +A +F++M G P+ TFN+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEH---RIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
LI G C+ + I A+ + +M S G+ A VTYN+LIN G++ EA L +EM+ G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
+ +T N+LI G C+ V+KAR LF+ + G +PS I+ N LI+ C+ G +E+A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
+ M+ RG PD+ T+N LI GL R G +E + +L G+ VT+N L+ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
CK G A LLDE ++ PN T+++L++ + L+
Sbjct: 680 CKGGFVYDACLLLDEGI---EDGFVPNHRTWSILLQSIIPQETLD 721
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 11/382 (2%)
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
Y + + S N +L LV + V+ +M R+I L +F V+ C +++
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
A ++ DM G P V Y LI K ++ +A + ++M G +P+ TFN
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSK---CNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
+I G CK + I+ A K+ M G A +TY L+NGLC G++D A ++
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRI 348
Query: 325 LKPNVVTSNALINGFCKKKLVEKAR-VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
KP +V N LI+GF ++ A+ VL D ++ G+ P V TYN+LI Y KEG + A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGA 443
+ + M ++G P+V +Y L+ G + G ++ N++NE+ +G++ V +N L+ A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 444 LCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
CK+ + +AV + E M ++ P++ T+N LI G C+ +++ A LL +++ +G+
Sbjct: 469 FCKEHRIPEAVEIFRE---MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 504 IPNQTTYQIVREEMMEKGFIPD 525
+ N TY + + +G I +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKE 547
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 191/412 (46%), Gaps = 48/412 (11%)
Query: 137 EAFKRAGDY-GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNG 195
E F G G + S L+ L G+F+ ++ + +MK I F ++
Sbjct: 96 ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155
Query: 196 LCKAGKLNKASDIMEDMKSL-GVSPKVVTYN----ILIDGYCKKGGIGKMYKADAVFKDM 250
KAG + + +M +M+++ P +YN IL+ G C K A VF DM
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK-------VAANVFYDM 208
Query: 251 VENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKL 310
+ I P TF ++ FC I +A+ + +M HG V Y +LI+ L ++
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 311 DEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY--- 367
+EA+ L +EM G P+ T N +I G CK + +A + + + +G +P ITY
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 368 ----------------------------NTLIDAYCKEGRMEDAFAMRNSML-DRGVLPD 398
NTLI + GR++DA A+ + M+ G++PD
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 399 VSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD 458
V TYN LI G +EG V +++++ N G + + +Y ILV CK GK +A ++L+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
E M + PN V +N LI FC++ ++ +A + E+ KG P+ T+
Sbjct: 449 E---MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G+ ++ ++ N L+ A ++ G+ ++ + EM + L+ ++N ++ GLC+AG+++KA
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+ E M G +P ++ NILI+G C+ G + + + K+MV G P+ VTFN+L
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ---KEMVLRGSTPDIVTFNSL 640
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
I+G C+ I + +F ++ + GI VT+N+L++ LC G + +A L DE + G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 326 KPNVVTSNALINGFCKKKLVEKAR 349
PN T + L+ ++ +++ R
Sbjct: 701 VPNHRTWSILLQSIIPQETLDRRR 724
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 5/262 (1%)
Query: 274 NISAAMKVFEEMGSH-GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
N+S +M++F GS G Y LI L +G+ L +M G+
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 333 NALINGFCKKKLV-EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSML 391
+++ + K + R++ + + P+ +YN +++ + A + ML
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 392 DRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSK 451
R + P + T+ ++ ++ +++ ++ +G V Y L+ +L K +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 452 KAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQ 511
+A+ LL+EMF M P+ T+N +I G C+ ++ +A ++N +L +G P+ TY
Sbjct: 270 EALQLLEEMFLM---GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 512 IVREEMMEKGFIPDIEGHMYNI 533
+ + + G + + Y I
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRI 348
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 219/444 (49%), Gaps = 7/444 (1%)
Query: 21 WSKLK----NTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVA 76
W KL + D V L D +L L +F W+ SHSL +LH+L
Sbjct: 69 WDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKN 128
Query: 77 KKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
+K+ S L + NG + +F AL + D L + K
Sbjct: 129 RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNAT 188
Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
+ F + DYG +V SCN + +L+ +G+ + Y+EM+R +I N + N V++G
Sbjct: 189 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
C++GKL+K ++++DM+ LG V+YN LI G+C+KG + K + M ++G+
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM---MGKSGLQ 305
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
PN VTFNTLI GFC+ + A KVF EM + +A VTYN+LING G + A
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
++M+ +G++ +++T NALI G CK+ KA ++ ++ L P+ T++ LI C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
+ F + SM+ G P+ T+N L++ R + +G ++ E+V + T
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 437 YNILVGALCKDGKSKKAVSLLDEM 460
+ + L GK + LL EM
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 183/376 (48%), Gaps = 26/376 (6%)
Query: 167 FEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA----GKLNKASDIMEDMKSLGVSPKVV 222
F+ + Y Y+E DS V + L K K A+D MK G P V
Sbjct: 154 FDALLYSYRE---------CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
+ N + G G++ A +++M I PN T N ++ G+C+ + +++
Sbjct: 205 SCNAYMSSLL---GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL 261
Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
++M G A V+YN+LI G C G L A+ L++ M SGL+PNVVT N LI+GFC+
Sbjct: 262 QDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
+++A +F ++ ++P+ +TYNTLI+ Y ++G E AF M+ G+ D+ TY
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
N LI GL ++ + EL + T++ L+ C + + L M
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI- 440
Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGL-IPNQTTYQIVR------E 515
+ PN T+N+L+ FC+ + A+ +L E++ + + + ++T +Q+ +
Sbjct: 441 --RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Query: 516 EMMEKGFIPDIEGHMY 531
+ + K + ++EG +
Sbjct: 499 DQLVKKLLQEMEGKKF 514
Score = 39.3 bits (90), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 110 DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
++L NS L++ GFE +K G + + N L+ A + F+
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMK 213
V +EM RR I L+ + + V NGL GK ++++M+
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 207/377 (54%), Gaps = 8/377 (2%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S+ ++LL A+ K K++ V Y++++M+ I NL + N +LN C+ +L+ A +
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT+ L++G+C+ ++Y A +F MV G PN V +NT+IDG
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGD---RVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
CK + + A+ + M GI VVTYNSLI+GLC G+ +A + M + P+V
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
T NALI+ K+ V +A ++++ + L P ++TY+ LI C R+++A M
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M+ +G PDV TY+ LI G + VE + E+ G+ VTY IL+ C+ GK
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+++ +E+F+ M PNI+TYNVL+ G C GK+E A +L ++ + G+ +
Sbjct: 377 ----LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 509 TYQIVREEMMEKGFIPD 525
TY I+ M + G + D
Sbjct: 433 TYNIIIRGMCKAGEVAD 449
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 230/444 (51%), Gaps = 15/444 (3%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
L +V + P I F L K K+ V ++ + +LC +I+++
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN--- 124
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + + L + G + S+++ LL + + D Y++ +M +
Sbjct: 125 -CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
N+ +N +++GLCK+ +++ A D++ M+ G+ P VVTYN LI G C G + A
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG---RWSDA 240
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
+ M + I P+ TFN LID K+ +S A + +EEM + +VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
LC+ +LDEA + M++ G P+VVT + LING+CK K VE LF ++S++G+ +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
+TY LI YC+ G++ A + M+ GV P++ TYN L+ GL G +E I+
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
++ NGM A +VTYNI++ +CK G+ A D + + P+I TY ++ G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADA---WDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 484 QKGKLEDANGLLNELLEKGLIPNQ 507
+KG +A+ L ++ E G++PN+
Sbjct: 478 KKGLRREADALFRKMKEDGILPNE 501
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
KLD+++ L M+ P++ + L++ K K + L++ + G+ ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
L++ +C+ ++ A + M+ G P + T+ L+ G R V + +++V
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
G + +V YN ++ LC KSK+ + LD + +MEK+ P++VTYN LI G C G+
Sbjct: 181 GYKPNVVIYNTIIDGLC---KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
DA +++ + ++ + P+ T+ + + +++G + + E
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 245/481 (50%), Gaps = 19/481 (3%)
Query: 30 NTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSF---L 86
N +LQ N P I R++ + R+S +L L ++ ++ P I F L
Sbjct: 18 NLCLLQKGNPVIVP-FISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVL 76
Query: 87 HMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
K+ + V ++FH + C L +I+I+ L + + + +
Sbjct: 77 SKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL----CRCSRFVIALSVVGKMMK 132
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+G + V++ + L+ + + D + +M+ ++ +N +++G CK G +N
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
A ++ + M+ GV VTYN L+ G C G + A + +DMV I+PN +TF
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSG---RWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
+ID F K+ S AMK++EEM + V TYNSLINGLC+ G++DEA + D M+ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
P+VVT N LINGFCK K V++ LF +++++GL ITYNT+I Y + GR + A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
+ + M R P++ TY+ L+ GL VE + + + + + TYNI++ +
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
CK G + A L + + P++V+Y +I GFC+K + + ++ L ++ E GL+
Sbjct: 427 CKIGNVEDAWDLFRSL---SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 505 P 505
P
Sbjct: 484 P 484
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 206/393 (52%), Gaps = 38/393 (9%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ +++L + K ++ V ++ M+ I +L S+N V+N LC+ + A ++
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M G P VVT + LI+G+C+ +++ A + M E G P+ V +NT+IDG
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGN---RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
CK ++ A+++F+ M G+ A VTYNSL+ GLC G+ +A L +M+ + PNV
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
+T A+I+ F K+ +A L+++++ + + P V TYN+LI+ C GR+++A M +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM------------------- 430
M+ +G LPDV TYN LI G + V+ + E+ G+
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 431 -------------RAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNV 477
R + TY+IL+ LC + + +KA+ L + M K E E +I TYN+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL---DITTYNI 421
Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
+I G C+ G +EDA L L KGL P+ +Y
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 145/265 (54%), Gaps = 3/265 (1%)
Query: 246 VFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC 305
+F M+++ LP+ V F+ ++ K +N + +F M GI + +YN +IN LC
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 306 VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVI 365
+ A+++ +MM G +P+VVT ++LINGFC+ V A L + E G P V+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 366 TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNEL 425
YNT+ID CK G + DA + + M GV D TYN L+AGL G +M ++
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 426 VNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQK 485
V + ++T+ ++ K+GK +A+ L +EM + + P++ TYN LI G C
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD---PDVFTYNSLINGLCMH 292
Query: 486 GKLEDANGLLNELLEKGLIPNQTTY 510
G++++A +L+ ++ KG +P+ TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTY 317
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 222/414 (53%), Gaps = 41/414 (9%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ N+LL A+VK K++ V + K+M+ I +L +FN V+N C +++ A I+
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P VT L++G+C++ ++ A ++ MVE G P+ V +N +ID
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRN---RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLC------------------------ 305
CK + ++ A F+E+ GI VVTY +L+NGLC
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 306 -----------VDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
+GK+ EA L +EM+ + P++VT ++LING C +++A +FD
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ +G V++YNTLI+ +CK R+ED + M RG++ + TYN LI G + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
V+ + +++ G+ + TYNIL+G LC +G+ +KA+ + ++M K E + +IVT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD---LDIVT 437
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEG 528
Y +I+G C+ GK+E+A L L KGL P+ TY + + KG + ++E
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 15/446 (3%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCS--DSLCRNSIIIDMLM 123
L +V ++ +P I F L VK K+ V ++ + + L +I+I+
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + L + G + ++ L+ + + D + +M +
Sbjct: 132 CCF----QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
++ ++N +++ LCK ++N A D ++++ G+ P VVTY L++G C + A
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---RWSDA 244
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
+ DM++ I PN +T++ L+D F K+ + A ++FEEM I +VTY+SLING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
LC+ ++DEA + D M++ G +VV+ N LINGFCK K VE LF ++S++GL +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
+TYNTLI + + G ++ A + M G+ PD+ TYN L+ GL G +E I
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
++ M +VTY ++ +CK GK ++A SL + + P+IVTY ++ G C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF---CSLSLKGLKPDIVTYTTMMSGLC 481
Query: 484 QKGKLEDANGLLNELLEKGLIPNQTT 509
KG L + L ++ ++GL+ N T
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 149/272 (54%), Gaps = 3/272 (1%)
Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
K+ A +F DMV++ P+ V FN L+ K + + + ++M GI + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
+IN C ++ A+++ +M+ G +P+ VT +L+NGFC++ V A L D + E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
G P ++ YN +ID+ CK R+ DAF + +G+ P+V TY L+ GL
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
++++++ + ++TY+ L+ A K+GK +A L +EM +M + P+IVTY+ L
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID---PDIVTYSSL 301
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
I G C ++++AN + + ++ KG + + +Y
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
+D ++ A+ +F +M +V +N L++ + K D ++L +M G++ ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
T N +IN FC V A + + + G P +T +L++ +C+ R+ DA ++ + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
++ G PD+ YN +I L + V + E+ G+R +VTY LV LC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 451 KKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
A LL +M K+K PN++TY+ L+ F + GK+ +A L E++ + P+ TY
Sbjct: 242 SDAARLLSDMI---KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 511 Q 511
Sbjct: 299 S 299
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
D KL++A+ L +M+ S P++V N L++ K K + L + G+ + T
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
+N +I+ +C ++ A ++ ML G PD T L+ G R V ++++++V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
G + +V YN ++ +LCK + A E+ E++ PN+VTY L+ G C
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSS 239
Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
+ DA LL+++++K + PN TY + + ++ G
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 216/414 (52%), Gaps = 39/414 (9%)
Query: 144 DYGLKS----SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKA 199
DY ++S + + CN+++ V+ + + +Y++M+ RRI LN+ SFN ++ C
Sbjct: 95 DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154
Query: 200 GKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK------------MYKADAVF 247
KL+ + + LG P VVT+N L+ G C + I + +A A+F
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
MVE G+ P +TFNTLI+G C + + A + +M G+ VVTY +++NG+C
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
G A+ L +M + +KP+VV +A+I+ CK A+ LF ++ E+G++P+V TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
N +ID +C GR DA + M++R + PDV T+N LI+ +EG + + +E+++
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
+ VTYN ++ CK + A + D M P++VT+N +I +C+ +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDVYCRAKR 447
Query: 488 LEDANGLLNELLEKGLIPNQTTY----------------QIVREEMMEKGFIPD 525
+++ LL E+ +GL+ N TTY Q + +EM+ G PD
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 223/420 (53%), Gaps = 45/420 (10%)
Query: 139 FKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCK 198
F + + GL V++ N L+ L EG+ + + +M + + +++ ++ ++NG+CK
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 199 AGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADA--VFKDMVENGIL 256
G A +++ M+ + P VV Y+ +ID CK G + +DA +F +M+E GI
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG-----HHSDAQYLFSEMLEKGIA 328
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
PN T+N +IDGFC S A ++ +M I V+T+N+LI+ +GKL EA L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK 376
DEM+ + P+ VT N++I GFCK + A+ +FD ++ SP V+T+NT+ID YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
R+++ + + RG++ + +TYN LI G N+ +++ E++++G+ +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEK---------------------EKKW------ 469
NIL+ C++ K ++A+ L E+ +M K ++ W
Sbjct: 505 CNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 470 ------PNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
P++ TYNV+I GFC K + DAN L +++ + G P+ +TY + ++ G I
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 198/370 (53%), Gaps = 12/370 (3%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+K V+ + ++ L K+G D +Y++ EM + I N+ ++N +++G C G+ + A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
++ DM ++P V+T+N LI K+G K+++A+ + +M+ I P+ VT+N++I
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
GFCK A +F+ M S VVT+N++I+ C ++DE + L E+ GL
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
N T N LI+GFC+ + A+ LF ++ G+ P IT N L+ +C+ ++E+A +
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
+ + D YN +I G+ + V+ ++ L +G+ + TYN+++ C
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC- 583
Query: 447 DGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K A+S + +F KM+ P+ TYN LI+G + G+++ + L++E+ G
Sbjct: 584 ---GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 506 NQTTYQIVRE 515
+ T ++V +
Sbjct: 641 DAFTIKMVAD 650
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 176/331 (53%), Gaps = 18/331 (5%)
Query: 135 GFEAFKRAGDYG----------LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
GF +F R D + VL+ N L+ A VKEGK + E + EM R I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
+ ++N ++ G CK + + A + M L SP VVT+N +ID YC+ + + +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ-- 453
Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
+ +++ G++ N T+NTLI GFC+ +N++AA +F+EM SHG+ +T N L+ G
Sbjct: 454 -LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
C + KL+EA+ L + + S + + V N +I+G CK V++A LF + G+ P V
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
TYN +I +C + + DA + + M D G PD STYN LI G + G ++ +++E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVS 455
+ +NG T +V L DG+ K+ S
Sbjct: 633 MRSNGFSGDAFTIK-MVADLITDGRLDKSFS 662
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 20/295 (6%)
Query: 244 DAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
DA+ F MV + V N +I F + A+ ++ +M I + ++N LI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR------------ 349
C KL +++ ++ G +P+VVT N L++G C + + +A
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 350 ---VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
LFD + E GL+P VIT+NTLI+ C EGR+ +A A+ N M+ +G+ DV TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
G+ + G+ + N+++++ ++ +V Y+ ++ LCKDG A L EM ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML---EK 325
Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
PN+ TYN +I GFC G+ DA LL +++E+ + P+ T+ + +++G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 69/283 (24%)
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
LD+A+ D M+ S V N +I F + + A L+ + + + ++ ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVST---------------------------- 401
LI +C ++ + + + G PDV T
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 402 ----------------------YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNI 439
+N LI GL EG V ++N++V G+ +VTY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 440 LVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL 499
+V +CK G +K A++LL KME+ P++V Y+ +I C+ G DA L +E+L
Sbjct: 267 IVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 500 EKGLIPNQTTY----------------QIVREEMMEKGFIPDI 526
EKG+ PN TY Q + +M+E+ PD+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 85 FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
L+ F +N K +F + L +++ ++++ K K ++ F
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
+G++ V + N ++ + D ++ +MK E + ++N ++ G KAG+++K
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 205 ASDIMEDMKSLGVSPKVVTYNILID 229
+ +++ +M+S G S T ++ D
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMVAD 650
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 255/519 (49%), Gaps = 28/519 (5%)
Query: 36 LFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKF 95
L + DP L LR+F + HS L+H+LV A + S + +
Sbjct: 77 LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASS--LLQTLLLRA 134
Query: 96 TSVSTIFHALSTCSDSLCR--NSIIIDMLMLAYVKNMKPHLGFEAFKRA-GDYGLKSSVL 152
S +F+ L +C + C+ +S D+L+ YV++ + G FK L V
Sbjct: 135 LKPSDVFNVLFSCYEK-CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVR 193
Query: 153 SCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDM 212
+ + LL LVK F ++ +M I ++ + V+ LC+ L++A +++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 213 KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKD 272
++ G +V YN+LIDG CKK K+++A + KD+ + P+ VT+ TL+ G CK
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQ---KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 273 ENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTS 332
+ +++ +EM + +SL+ GL GK++EA+ L ++ G+ PN+
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 333 NALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLD 392
NALI+ CK + +A +LFD + + GL P+ +TY+ LID +C+ G+++ A + M+D
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 393 RGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKK 452
G+ V YN LI G + G++ M E++N + +VTY L+G C GK K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 453 AVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI 512
A+ L EM + P+I T+ L+ G + G + DA L NE+ E + PN+ TY +
Sbjct: 491 ALRLYHEM---TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 513 VRE----------------EMMEKGFIPDIEGHMYNISG 535
+ E EM EKG +PD + I G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 206/408 (50%), Gaps = 41/408 (10%)
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
+ L+ L K GK E+ + K + + NL +N +++ LCK K ++A + + M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
+G+ P VTY+ILID +C++G K+ A + +MV+ G+ + +N+LI+G CK +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRG---KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNA 334
ISAA EM + + VVTY SL+ G C GK+++A+ L EM G+ P++ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
L++G + L+ A LF++++E + P+ +TYN +I+ YC+EG M AF M ++G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 395 VLPDVSTY--------------------------NC---------LIAGLSREGNVEGVR 419
++PD +Y NC L+ G REG +E
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLI 479
++ E+V G+ LV Y +L+ K K LL EM + P+ V Y +I
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK---PDDVIYTSMI 689
Query: 480 KGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
+ G ++A G+ + ++ +G +PN+ TY V + + GF+ + E
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 212/458 (46%), Gaps = 55/458 (12%)
Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYK 175
SI+IDM + + K D GLK SV N L+ K G E
Sbjct: 406 SILIDM----FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 176 EMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKG 235
EM +++E + ++ ++ G C GK+NKA + +M G++P + T+ L+ G + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 236 GIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVV 295
I K +F +M E + PN VT+N +I+G+C++ ++S A + +EM GI
Sbjct: 522 LIRDAVK---LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 296 TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDI 355
+Y LI+GLC+ G+ EA D + + N + L++GFC++ +E+A + ++
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 356 SEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNV 415
++G+ ++ Y LID K + F + M DRG+ PD Y +I S+ G+
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 416 EGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--------------- 460
+ I + ++N G VTY ++ LCK G +A L +M
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 461 --------FKMEKEKKWPNIV---------TYNVLIKGFCQKGKLEDANGLLNELLEKGL 503
M+K + N + TYN+LI+GFC++G++E+A+ L+ ++ G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 504 IPNQTTYQIVREE----------------MMEKGFIPD 525
P+ TY + E M EKG PD
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 197/421 (46%), Gaps = 37/421 (8%)
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
LM Y K + + G+ S+ + LL L + G D ++ EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI---- 237
++ N ++N ++ G C+ G ++KA + +++M G+ P +Y LI G C G
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 238 ----------------------------GKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
GK+ +A +V ++MV+ G+ + V + LIDG
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
K ++ + +EM G+ V Y S+I+ G EA + D M+ G PN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCK-EGRMEDAFAMRN 388
VT A+ING CK V +A VL + P+ +TY +D K E M+ A + N
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
++L +G+L + +TYN LI G R+G +E ++ ++ +G+ +TY ++ LC+
Sbjct: 778 AIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 449 KSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
KKA+ L + M EK + P+ V YN LI G C G++ A L NE+L +GLIPN
Sbjct: 837 DVKKAIELWNSM--TEKGIR-PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 509 T 509
T
Sbjct: 894 T 894
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 216/487 (44%), Gaps = 80/487 (16%)
Query: 119 IDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMK 178
+ L+ VK L E F G++ V ++R+L + + + M+
Sbjct: 195 LSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 179 RRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI- 237
++N+ +N +++GLCK K+ +A I +D+ + P VVTY L+ G CK
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 238 -------------------------------GKMYKADAVFKDMVENGILPNEVTFNTLI 266
GK+ +A + K +V+ G+ PN +N LI
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
D CK A +F+ MG G+ VTY+ LI+ C GKLD A++ EM+ +GLK
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
+V N+LING CK + A ++ + L P+V+TY +L+ YC +G++ A +
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
+ M +G+ P + T+ L++GL R G + + NE+ ++ VTYN+++ C+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 447 DGKSKKAVSLLDEMFK--------------------------------MEKEKKWPNIVT 474
+G KA L EM + + K N +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVRE----------------EMM 518
Y L+ GFC++GKLE+A + E++++G+ + Y ++ + EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 519 EKGFIPD 525
++G PD
Sbjct: 675 DRGLKPD 681
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 8/398 (2%)
Query: 68 RLLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
RL H + P I +F L + G +F+ ++ + + N + ++++
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN--VKPNRVTYNVMIE 550
Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
Y + FE K + G+ S L+ L G+ + + + + EL
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
N + +L+G C+ GKL +A + ++M GV +V Y +LIDG K +
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF--- 667
Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
+ K+M + G+ P++V + ++ID K + A +++ M + G VTY ++INGL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
C G ++EA L +M PN VT ++ K ++ + V + +GL +
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
TYN LI +C++GR+E+A + M+ GV PD TY +I L R +V+ + N
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
+ G+R V YN L+ C G+ KA L +EM +
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 146/325 (44%), Gaps = 28/325 (8%)
Query: 61 HSLLLTGRLLHSLVVAKKYPK---------IRSFLHMFVKNGKFTSVSTIFHALSTCSDS 111
H L LTG+ + V K LH F + GK ALS C +
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE------EALSVCQEM 638
Query: 112 LCRNSIIIDMLMLAY-------VKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
+ R +D+ ++ Y +K+ L F K D GLK + ++ A K
Sbjct: 639 VQRG---VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
G F++ ++ M N ++ V+NGLCKAG +N+A + M+ + P VTY
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
+D K G M KA + + G+L N T+N LI GFC+ I A ++
Sbjct: 756 GCFLDILTK--GEVDMQKA-VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
M G++ +TY ++IN LC + +A+ L + M G++P+ V N LI+G C
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 345 VEKARVLFDDISEQGLSPSVITYNT 369
+ KA L +++ QGL P+ T T
Sbjct: 873 MGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 207/393 (52%), Gaps = 6/393 (1%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
E R + G K +++ N L+ L GK + + +M + N ++ VLN
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
+CK+G+ A +++ M+ + V Y+I+IDG CK G + + +F +M G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN---LFNEMEMKG 293
Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
I N +T+N LI GFC K+ +M I VVT++ LI+ +GKL EA
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
L EM+ G+ P+ +T +LI+GFCK+ ++KA + D + +G P++ T+N LI+ Y
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
CK R++D + M RGV+ D TYN LI G G + + + E+V+ + +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
VTY IL+ LC +G+S+KA+ + + K+EK K +I YN++I G C K++DA L
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
L KG+ P TY I+ + +KG + + E
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 210/405 (51%), Gaps = 41/405 (10%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+YG + + ++ +L + K G+ + ++M+ R I+L+ ++ +++GLCK G L+
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
A ++ +M+ G++ ++TYNILI G+C G + + +DM++ I PN VTF+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAG---RWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
LID F K+ + A ++ +EM GIA +TY SLI+G C + LD+A + D M++
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
G PN+ T N LING+CK ++ LF +S +G+ +TYNTLI +C+ G++ A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 384 FAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVE------------------GVRNIMNEL 425
+ M+ R V P++ TY L+ GL G E G+ NI+
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 426 VNN-----------------GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
+ N G++ G+ TYNI++G LCK G +A L KME++
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR---KMEEDGH 574
Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
P+ TYN+LI+ G + L+ EL G + +T ++V
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 41/407 (10%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
+V+ ++L A+ K +++ V + K+M+ + I NL + + ++N C+ KL A M
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
+ LG P +T++ LI+G C +G ++ +A + MVE G P+ +T NTL++G
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEG---RVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 270 -----------------------------------CKDENISAAMKVFEEMGSHGIAAGV 294
CK + AM++ +M I
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
V Y+ +I+GLC G LD A L +EM G+ N++T N LI GFC + L D
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ ++ ++P+V+T++ LID++ KEG++ +A + M+ RG+ PD TY LI G +E +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
++ +++ +V+ G + T+NIL+ CK + + L KM + VT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVT 440
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
YN LI+GFC+ GKL A L E++ + + PN TY+I+ + + + G
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 12/313 (3%)
Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
K + A D+ DM P V+ ++ L I K + D V K M GI
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLF------SAIAKTKQYDLVLALCKQMELKGIAH 121
Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
N T + +I+ FC+ + A ++ G +T+++LINGLC++G++ EA+ L
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
D M+ G KP+++T N L+NG C +A +L D + E G P+ +TY +++ CK
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
G+ A + M +R + D Y+ +I GL + G+++ N+ NE+ G+ ++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
NIL+G C G+ LL +M K K PN+VT++VLI F ++GKL +A L E
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMI---KRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 498 LLEKGLIPNQTTY 510
++ +G+ P+ TY
Sbjct: 359 MIHRGIAPDTITY 371
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 173/307 (56%), Gaps = 4/307 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ + L+ + VKEGK + E ++KEM R I + ++ +++G CK L+KA+
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+++ M S G P + T+NILI+GYCK I + +F+ M G++ + VT+NTLI
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE---LFRKMSLRGVVADTVTYNTLI 445
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
GFC+ ++ A ++F+EM S + +VTY L++GLC +G+ ++A+ + +++ S ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
++ N +I+G C V+ A LF + +G+ P V TYN +I CK+G + +A +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
M + G PD TYN LI +G+ ++ EL G T +++ L
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-S 624
Query: 447 DGKSKKA 453
DG+ KK+
Sbjct: 625 DGRLKKS 631
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
E G + ++Y + VD K D+A+ L +M+ S P V+ + L + K K
Sbjct: 43 ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK 102
Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
+ L + +G++ ++ T + +I+ +C+ ++ AF+ ++ G P+ T++
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162
Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-- 461
LI GL EG V +++ +V G + L+T N LV LC GK +A+ L+D+M
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 462 ------------------------------KMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
KME+ + V Y+++I G C+ G L++A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 492 NGLLNELLEKGLIPNQTTYQIV 513
L NE+ KG+ N TY I+
Sbjct: 283 FNLFNEMEMKGITTNIITYNIL 304
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + ++ L+ L K + + M +R + NL ++ V+NGLCK G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+++ M++ + VV +N +ID CK + A +FK+M GI PN VT+++L
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 301
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
I C S A ++ +M I +VT+N+LI+ +GK EA L D+M+ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
P++ T N+L+NGFC ++KA+ +F+ + + P V+TYNTLI +CK R+ED
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M RG++ D TY LI GL +G+ + + + ++V++G+ ++TY+IL+ LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
+GK +KA+ + D M K E + W PN+V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
TYN +I G C K L++A LL ++ E G +PN TY + + G
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 210/394 (53%), Gaps = 24/394 (6%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ N+LL A+ K KF+ V + ++M+R I L ++N ++N C+ +++ A ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I A A+ MVE G P+ +TF TLI G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S A+ + + M G +VTY ++NGLC G D A+ L ++M A+ ++ +V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+ CK + V+ A LF ++ +G+ P+V+TY++LI C GR DA + +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M+++ + P++ T+N LI +EG + ++++ + + TYN LV C +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
KA +MF+ M + +P++VTYN LIKGFC+ ++ED L E+ +GL+ +
Sbjct: 381 LDKA----KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 509 TY----------------QIVREEMMEKGFIPDI 526
TY Q V ++M+ G PDI
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 188/356 (52%), Gaps = 17/356 (4%)
Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
+T DSLC+ + D L L FK G++ +V++ + L+ L
Sbjct: 263 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
G++ D + +M ++I NL +FN +++ K GK +A + +DM + P + TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
N L++G+C ++ KA +F+ MV P+ VT+NTLI GFCK + + ++F E
Sbjct: 369 NSLVNGFCMHD---RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
M G+ VTY +LI GL DG D A + +M++ G+ P+++T + L++G C
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
+EKA +FD + + + + Y T+I+ CK G+++D + + S+ +GV P+V TYN
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
+I+GL + ++ ++ ++ +G TYN L+ A +DG + L+ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 197/367 (53%), Gaps = 6/367 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+++ V+ N ++ +L K +D ++KEM+ + I N+ +++ +++ LC G+ + AS
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
++ DM ++P +VT+N LID + K+G K +A+ ++ DM++ I P+ T+N+L+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
+GFC + + A ++FE M S VVTYN+LI G C ++++ L EM GL
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
+ VT LI G + A+ +F + G+ P ++TY+ L+D C G++E A +
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCK 446
+ M + D+ Y +I G+ + G V+ ++ L G++ +VTYN ++ LC
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 447 DGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPN 506
++A +LL KM+++ PN TYN LI+ + G + L+ E+ + +
Sbjct: 553 KRLLQEAYALLK---KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Query: 507 QTTYQIV 513
+T +V
Sbjct: 610 ASTIGLV 616
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 162/305 (53%), Gaps = 39/305 (12%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ ++++ N L+ A VKEGKF + E +Y +M +R I+ ++ ++N ++NG C +L+KA
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ E M S P VVTYN LI G+CK ++ +F++M G++ + VT+ TLI
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
G D + A KVF++M S G+ ++TY+ L++GLC +GKL++A+ + D M S
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
G+KPNVVT N +I+G C K+L+++A L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
+ E G P+ TYNTLI A+ ++G + + M + D ST L+A +
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 621
Query: 412 EGNVE 416
+G ++
Sbjct: 622 DGRLD 626
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 38/259 (14%)
Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEK 347
++G Y ++ D KLD+A+ L M+ S P++V N L++ K K +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 348 ARVLFDDISEQGLSPSVITYNTLIDAYCKEG----------------------------- 378
L + + + + TYN LI+ +C+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 379 ------RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
R+ DA A+ + M++ G PD T+ LI GL +++ +V G +
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
LVTY ++V LCK G + A++LL+ KME K ++V +N +I C+ ++DA
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 493 GLLNELLEKGLIPNQTTYQ 511
L E+ KG+ PN TY
Sbjct: 281 NLFKEMETKGIRPNVVTYS 299
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 240/465 (51%), Gaps = 45/465 (9%)
Query: 85 FLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGD 144
+ F KNG+ + + L + + ++ ++K K + F + +
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLG--LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 145 YGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNK 204
GL ++V CN +L L K+GK ++ + +M+ R I N+ S+N V+ G C+ ++
Sbjct: 438 TGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 205 ASDIMEDMKSLGVSPKVVTYNILIDG---------------------------------- 230
A + ++ G+ P TY+ILIDG
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 231 -YCKKGGIGKMYKADAVFKDMVENGIL-PNEVTFNTLIDGFCKDENISAAMKVFEEMGSH 288
CK +G+ KA + +M+E L + +++N++IDGF K+ + +A+ +EEM +
Sbjct: 557 GLCK---VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 289 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 348
GI+ V+TY SL+NGLC + ++D+A+ +RDEM G+K ++ ALI+GFCK+ +E A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 349 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 408
LF ++ E+GL+PS YN+LI + G M A + ML G+ D+ TY LI G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 409 LSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK 468
L ++GN+ + E+ G+ + Y ++V L K G+ K V + +E M+K
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE---MKKNNV 790
Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
PN++ YN +I G ++G L++A L +E+L+KG++P+ T+ I+
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 246/530 (46%), Gaps = 84/530 (15%)
Query: 54 TKELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLC 113
+K+ + H++ + ++L L V +P + L V+ T ++ + + +
Sbjct: 174 SKDRQTDHAVDIVNQMLE-LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM--VAIGVD 230
Query: 114 RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKS-------SVLSC---------NQL 157
+++ +LM A ++ KP E RA + G + +V +C N L
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290
Query: 158 LR--------------------ALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
LR A VK+G +D + EM I +N+ + ++ G C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILP 257
K L A + + M+ G SP VT+++LI+ + K G +M KA +K M G+ P
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG---EMEKALEFYKKMEVLGLTP 407
Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
+ +T+I G+ K + A+K+F+E G+A V N++++ LC GK DEA L
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELL 466
Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID----- 372
+M + G+ PNVV+ N ++ G C++K ++ AR++F +I E+GL P+ TY+ LID
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 373 ------------------------------AYCKEGRMEDAFAMRNSMLDRGVL-PDVST 401
CK G+ A + +M++ L +
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
YN +I G +EG ++ E+ NG+ ++TY L+ LCK+ + +A+ + DEM
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM- 645
Query: 462 KMEKEKKWP-NIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
K K +I Y LI GFC++ +E A+ L +ELLE+GL P+Q Y
Sbjct: 646 ---KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 164/270 (60%), Gaps = 5/270 (1%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S +S N ++ KEG+ + Y+EM I N+ ++ ++NGLCK ++++A ++
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
++MK+ GV + Y LIDG+CK+ M A A+F +++E G+ P++ +N+LI GF
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSN---MESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
N+ AA+ ++++M G+ + TY +LI+GL DG L A L EM A GL P+
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
+ ++NG KK K +F+++ + ++P+V+ YN +I + +EG +++AF + +
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
MLD+G+LPD +T++ L++G + GN++ VR
Sbjct: 820 MLDKGILPDGATFDILVSG--QVGNLQPVR 847
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 49/498 (9%)
Query: 22 SKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKK-YP 80
+K + D +VI L N +P LR++ W+ + + L+H LV + + Y
Sbjct: 65 AKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYG 124
Query: 81 KIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFK 140
+ L +V T ++++ +S DS GFE
Sbjct: 125 RASDLLIRYVSTSNPTPMASVL--VSKLVDS-------------------AKSFGFEVNS 163
Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF----NFVLNGL 196
RA +Y LL A K+ + + + +M +EL++ F N L+ L
Sbjct: 164 RAFNY-----------LLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYVNRTLSAL 208
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
+ L +A ++ M ++GV VT +L+ ++ K +A V +E G
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREE---KPAEALEVLSRAIERGAE 265
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI-AAGVVTYNSLINGLCVDGKLDEAVA 315
P+ + ++ + CK +++ A + EM + TY S+I G +D+A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 316 LRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYC 375
L+DEM++ G+ NVV + +LI G CK + A VLFD + ++G SP+ +T++ LI+ +
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
K G ME A M G+ P V + +I G + E + +E G+ A +
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 444
Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
N ++ LCK GK+ +A LL KME PN+V+YN ++ G C++ ++ A +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLS---KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 496 NELLEKGLIPNQTTYQIV 513
+ +LEKGL PN TY I+
Sbjct: 502 SNILEKGLKPNNYTYSIL 519
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
LC + + + ++ + K + A++ G+ +V++ L+ L K + +
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
+ EMK + ++L++ ++ +++G CK + AS + ++ G++P YN LI G+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
+G M A ++K M+++G+ + T+ TLIDG KD N+ A +++ EM + G+
Sbjct: 700 ---RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
+ Y ++NGL G+ + V + +EM + + PNV+ NA+I G ++ +++A L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 352 FDDISEQGLSPSVITYNTLI 371
D++ ++G+ P T++ L+
Sbjct: 817 HDEMLDKGILPDGATFDILV 836
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 4/243 (1%)
Query: 280 KVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGF 339
K+ + S G +N L+N D + D AV + ++M+ + P N ++
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 340 CKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDV 399
++ + +A+ L+ + G+ +T L+ A +E + +A + + ++RG PD
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 400 STYNCLIAGLSREGNVEGVRNIMNELVNNGM-RAGLVTYNILVGALCKDGKSKKAVSLLD 458
Y+ + + ++ +++ E+ + TY ++ A K G A+ L D
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 459 EMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMM 518
EM + N+V LI G C+ L A L +++ ++G PN T+ ++ E
Sbjct: 329 EMLS---DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 519 EKG 521
+ G
Sbjct: 386 KNG 388
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
L E + GL + ++ L K+G+F V +++EMK+ + N+ +N V+
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
G + G L++A + ++M G+ P T++IL+ G
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 203/376 (53%), Gaps = 6/376 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + +++ ++ L K G+ + + +M++ +IE ++ ++ V++ LCK ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ +M + G+ P V TY+ LI C G+ A + DM+E I PN VTFN+L
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCN---YGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+F+EM I +VTYNSLING C+ +LDEA + M++
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
P+VVT N LINGFCK K V LF D+S +GL + +TY TLI + + ++A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ GV P++ TYN L+ GL + G +E + L + M + TYNI+ +C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK + L + + P+++ YN +I GFC+KG E+A L ++ E G +P
Sbjct: 497 KAGKVEDGWDLF---CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 506 NQTTYQIVREEMMEKG 521
+ TY + + G
Sbjct: 554 DSGTYNTLIRAHLRDG 569
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 210/394 (53%), Gaps = 24/394 (6%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++LL A+ K KF+ V ++M+ + NL ++N ++N LC+ +L+ A I+
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT N L++G+C I +A A+ MVE G P+ VTF TL+ G
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRIS---EAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
+ S A+ + E M G +VTY ++INGLC G+ D A+ L ++M ++ +V
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V + +I+ CK + V+ A LF ++ +G+ P V TY++LI C GR DA + +
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
ML+R + P+V T+N LI ++EG + + +E++ + +VTYN L+ C +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 450 SKKAVSLLDEMFKMEKEKK-WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
+A ++F + K P++VTYN LI GFC+ K+ D L ++ +GL+ N
Sbjct: 361 LDEA----QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 509 TY----------------QIVREEMMEKGFIPDI 526
TY Q+V ++M+ G P+I
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 217/400 (54%), Gaps = 10/400 (2%)
Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
K +P L + +++ V+ + ++ +L K +D ++ EM + I ++
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
+++ +++ LC G+ + AS ++ DM ++P VVT+N LID + K+G K+ +A+ +F
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG---KLIEAEKLF 333
Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
+M++ I PN VT+N+LI+GFC + + A ++F M S VVTYN+LING C
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
K+ + + L +M GL N VT LI+GF + + A+++F + G+ P+++TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
NTL+D CK G++E A + + + PD+ TYN + G+ + G VE ++ L
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
G++ ++ YN ++ CK G ++A +L KM+++ P+ TYN LI+ + G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLF---IKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEM----MEKGFI 523
+ L+ E+ + +TY +V + + ++KGF+
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFL 610
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 189/355 (53%), Gaps = 17/355 (4%)
Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
ST DSLC+ + D L L F + G++ V + + L+ L G
Sbjct: 244 STVIDSLCKYRHVDDALNL--------------FTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
++ D + +M R+I N+ +FN +++ K GKL +A + ++M + P +VTYN
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
LI+G+C ++ +A +F MV LP+ VT+NTLI+GFCK + + M++F +M
Sbjct: 350 SLINGFCMHD---RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G+ VTY +LI+G D A + +M++ G+ PN++T N L++G CK +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
EKA V+F+ + + + P + TYN + + CK G++ED + + S+ +GV PDV YN +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
I+G ++G E + ++ +G TYN L+ A +DG + L+ EM
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 193/345 (55%), Gaps = 6/345 (1%)
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
K ++ ++ EM + R ++ F+ +L+ + K K + E M+ LGVS + TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
I+I+ C++ ++ A A+ M++ G P+ VT N+L++GFC IS A+ + ++M
Sbjct: 105 IMINCLCRRS---QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G VT+ +L++GL K EAVAL + M+ G +P++VT A+ING CK+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
+ A L + + + + V+ Y+T+ID+ CK ++DA + M ++G+ PDV TY+ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
I+ L G ++++++ + +VT+N L+ A K+GK +A L DEM +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
+ PNIVTYN LI GFC +L++A + ++ K +P+ TY
Sbjct: 342 D---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 198/380 (52%), Gaps = 6/380 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G S+++ N LL + + + +M + + +F +++GL + K ++A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++E M G P +VTY +I+G CK+G + A + M + I + V ++T+
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRG---EPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID CK ++ A+ +F EM + GI V TY+SLI+ LC G+ +A L +M+ +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PNVVT N+LI+ F K+ + +A LFD++ ++ + P+++TYN+LI+ +C R+++A
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ + LPDV TYN LI G + V + ++ G+ VTY L+
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
+ A + +M + PNI+TYN L+ G C+ GKLE A + L + + P
Sbjct: 427 QASDCDNAQMVFKQMVS---DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 506 NQTTYQIVREEMMEKGFIPD 525
+ TY I+ E M + G + D
Sbjct: 484 DIYTYNIMSEGMCKAGKVED 503
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 3/289 (1%)
Query: 239 KMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYN 298
K+ +A +F +MV++ P+ V F+ L+ K + + E+M G++ + TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 299 SLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQ 358
+IN LC +L A+A+ +MM G P++VT N+L+NGFC + +A L D + E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 359 GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGV 418
G P +T+ TL+ + + +A A+ M+ +G PD+ TY +I GL + G +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 419 RNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVL 478
N++N++ + A +V Y+ ++ +LCK A++L EM + + P++ TY+ L
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM---DNKGIRPDVFTYSSL 281
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
I C G+ DA+ LL+++LE+ + PN T+ + + ++G + + E
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 15/441 (3%)
Query: 69 LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFH-----ALSTCSDSLCRNSIIIDMLM 123
L +V ++ P I F + T+ + L S L +I+I
Sbjct: 58 LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH--- 114
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + + + G + S+++ LL + D + M + E
Sbjct: 115 -CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
N+ +N +++GLCK G+LN A +++ +M+ G+ VVTYN L+ G C G + A
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG---RWSDA 230
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
+ +DM++ I P+ VTF LID F K N+ A ++++EM + VTYNS+ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPS 363
LC+ G+L +A D M + G PNVVT N LI+GFCK ++V++ LF +S +G +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
+ TYNTLI YC+ G++ A + M+ R V PD+ T+ L+ GL G +E +
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
++ + G+V YNI++ LCK K +KA L ++ E P+ TY ++I G C
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF---CRLPVEGVKPDARTYTIMILGLC 467
Query: 484 QKGKLEDANGLLNELLEKGLI 504
+ G +A+ L+ + E+G+I
Sbjct: 468 KNGPRREADELIRRMKEEGII 488
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 203/396 (51%), Gaps = 35/396 (8%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ +LL A ++E V Y ++M+ I +L SF +++ C+ +L+ A ++
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT+ L+ G+C IG + + MV++G PN V +NTLIDG
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGL 186
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
CK+ ++ A+++ EM G+ A VVTYN+L+ GLC G+ +A + +MM + P+V
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
VT ALI+ F K+ +++A+ L+ ++ + + P+ +TYN++I+ C GR+ DA +
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M +G P+V TYN LI+G + V+ + + G A + TYN L+ C+ GK
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 450 SKKAVSLLDEMFK--------------------------------MEKEKKWPNIVTYNV 477
+ A+ + M M + +K+ IV YN+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 478 LIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
+I G C+ K+E A L L +G+ P+ TY I+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 183/374 (48%), Gaps = 25/374 (6%)
Query: 62 SLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDM 121
S++ G LLH + + S + + VK+G +V +T D LC+N
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV----YNTLIDGLCKNG----- 190
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
+ ++ E GL + V++ N LL L G++ D + ++M +R
Sbjct: 191 ---------ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
I ++ +F +++ K G L++A ++ ++M V P VTYN +I+G C G++Y
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH---GRLY 298
Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
A F M G PN VT+NTLI GFCK + MK+F+ M G A + TYN+LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
+G C GKL A+ + M++ + P+++T L++G C +E A V FDD+ E
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
++ YN +I CK ++E A+ + + GV PD TY +I GL + G R
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP----RRE 474
Query: 422 MNELVNNGMRAGLV 435
+EL+ G++
Sbjct: 475 ADELIRRMKEEGII 488
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 6/348 (1%)
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
+FED ++ EM + ++ F +L + + M+ G+S + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
ILI +C+ ++ A +V M++ G P+ VTF +L+ GFC I A + M
Sbjct: 111 ILIHCFCR---CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G VV YN+LI+GLC +G+L+ A+ L +EM GL +VVT N L+ G C
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 346 EKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCL 405
A + D+ ++ ++P V+T+ LID + K+G +++A + M+ V P+ TYN +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 406 IAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEK 465
I GL G + + + + + G +VTYN L+ CK + + L +M
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ---RMSC 344
Query: 466 EKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV 513
E +I TYN LI G+CQ GKL A + ++ + + P+ T+ I+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 268 GFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKP 327
GF A +F EM +V + L+ + + + +M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 328 NVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMR 387
++ + LI+ FC+ + A + + + G PS++T+ +L+ +C R+ DAF++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 388 NSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKD 447
M+ G P+V YN LI GL + G + ++NE+ G+ A +VTYN L+ LC
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
G+ A +L +M K P++VT+ LI F ++G L++A L E+++ + PN
Sbjct: 225 GRWSDAARMLRDMMKRSIN---PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 508 TTY 510
TY
Sbjct: 282 VTY 284
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 309 KLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYN 368
+ ++A AL EM+ S P++V L+ + E + G+S + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 369 TLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN 428
LI +C+ R+ A ++ M+ G P + T+ L+ G + +++ +V +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 429 GMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKL 488
G +V YN L+ LCK+G+ A+ LL+EM EK+ ++VTYN L+ G C G+
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 489 EDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
DA +L +++++ + P+ T+ + + +++G
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 208/408 (50%), Gaps = 35/408 (8%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + ++ L+ L K + + M +R + NL ++ V+NGLCK G ++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
+++ M++ + VV +N +ID CK + A +FK+M GI PN VT+++L
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSL 226
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
I C S A ++ +M I +VT+N+LI+ +GK EA L D+M+ +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
P++ T N+LINGFC ++KA+ +F+ + + P + TYNTLI +CK R+ED
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M RG++ D TY LI GL +G+ + + + ++V++G+ ++TY+IL+ LC
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 446 KDGKSKKAVSLLDEMFKME--------------------KEKKW------------PNIV 473
+GK +KA+ + D M K E + W PN+V
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 474 TYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
TYN +I G C K L++A LL ++ E G +P+ TY + + G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 209/394 (53%), Gaps = 24/394 (6%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S+ N+LL A+ K KF+ V + ++M+R I NL ++N ++N C+ +++ A ++
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I A A+ MVE G P+ +TF TLI G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S A+ + + M G +VTY ++NGLC G +D A L ++M A+ ++ +V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+ CK + V+ A LF ++ +G+ P+V+TY++LI C GR DA + +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M+++ + P++ T+N LI +EG + ++++ + + TYN L+ C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 450 SKKAVSLLDEMFK-MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQT 508
KA +MF+ M + +P++ TYN LIKGFC+ ++ED L E+ +GL+ +
Sbjct: 306 LDKA----KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 509 TY----------------QIVREEMMEKGFIPDI 526
TY Q V ++M+ G PDI
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 187/356 (52%), Gaps = 17/356 (4%)
Query: 105 LSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKE 164
+T DSLC+ + D L L FK G++ +V++ + L+ L
Sbjct: 188 FNTIIDSLCKYRHVDDALNL--------------FKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 165 GKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTY 224
G++ D + +M ++I NL +FN +++ K GK +A + +DM + P + TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 225 NILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEE 284
N LI+G+C ++ KA +F+ MV P+ T+NTLI GFCK + + ++F E
Sbjct: 294 NSLINGFCMHD---RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 285 MGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKL 344
M G+ VTY +LI GL DG D A + +M++ G+ P+++T + L++G C
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 345 VEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNC 404
+EKA +FD + + + + Y T+I+ CK G+++D + + S+ +GV P+V TYN
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 405 LIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
+I+GL + ++ ++ ++ +G TYN L+ A +DG + L+ EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 198/380 (52%), Gaps = 6/380 (1%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
L F + +++ V+ N ++ +L K +D ++KEM+ + I N+ +++ ++
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
+ LC G+ + AS ++ DM ++P +VT+N LID + K+G K +A+ + DM++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFVEAEKLHDDMIKR 284
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
I P+ T+N+LI+GFC + + A ++FE M S + TYN+LI G C ++++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
L EM GL + VT LI G + A+ +F + G+ P ++TY+ L+D
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
C G++E A + + M + D+ Y +I G+ + G V+ ++ L G++
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
+VTYN ++ LC ++A +LL KM+++ P+ TYN LI+ + G +
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLK---KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 494 LLNELLEKGLIPNQTTYQIV 513
L+ E+ + + +T +V
Sbjct: 522 LIREMRSCRFVGDASTIGLV 541
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%), Gaps = 3/272 (1%)
Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
MV++ LP+ FN L+ K + + + E+M GI+ + TYN LIN C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
+ A+AL +MM G +P++VT ++L+NG+C K + A L D + E G P IT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
LI + +A A+ + M+ RG P++ TY ++ GL + G+++ N++N++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
+ A +V +N ++ +LCK A++L E ME + PN+VTY+ LI C G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKE---METKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
DA+ LL++++EK + PN T+ + + +++G
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 39/305 (12%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ ++++ N L+ A VKEGKF + E ++ +M +R I+ ++ ++N ++NG C +L+KA
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+ E M S P + TYN LI G+CK ++ +F++M G++ + VT+ TLI
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSK---RVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS--- 323
G D + A KVF++M S G+ ++TY+ L++GLC +GKL++A+ + D M S
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 324 --------------------------------GLKPNVVTSNALINGFCKKKLVEKARVL 351
G+KPNVVT N +I+G C K+L+++A L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
+ E G P TYNTLI A+ ++G + + M + D ST L+A +
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLH 546
Query: 412 EGNVE 416
+G ++
Sbjct: 547 DGRLD 551
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 210/381 (55%), Gaps = 10/381 (2%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+ G + ++ L+ L K + + M +R + NL ++ V+NGLCK G ++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV--FKDMVENGILPNEVT 261
A +++ M++ + VV Y+ +ID CK ++ DA+ F +M G+ PN +T
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKY-----RHEDDALNLFTEMENKGVRPNVIT 297
Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
+++LI C E S A ++ +M I VVT+N+LI+ +GKL EA L DEM+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
+ P++ T ++LINGFC +++A+ +F+ + + P+V+TYNTLI+ +CK R++
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
+ + M RG++ + TY LI G + + + + + ++V++G+ ++TYN L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
LCK+GK +KA+ + + +++ K P I TYN++I+G C+ GK+ED L L K
Sbjct: 478 DGLCKNGKLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 502 GLIPNQTTYQIVREEMMEKGF 522
G+ P+ Y + KG
Sbjct: 535 GVKPDVIIYNTMISGFCRKGL 555
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 202/364 (55%), Gaps = 6/364 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + ++++ ++ L K G + + +M+ +IE N+ ++ V++ LCK + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
++ +M++ GV P V+TY+ LI C + A + DM+E I PN VTFN L
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCN---YERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 266 IDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGL 325
ID F K+ + A K+++EM I + TY+SLING C+ +LDEA + + M++
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 326 KPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFA 385
PNVVT N LINGFCK K +++ LF ++S++GL + +TY TLI + + ++A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 386 MRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALC 445
+ M+ GV P++ TYN L+ GL + G +E + L + M + TYNI++ +C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 446 KDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIP 505
K GK + L + + P+++ YN +I GFC+KG E+A+ L ++ E G +P
Sbjct: 517 KAGKVEDGWDLF---CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 506 NQTT 509
+ T
Sbjct: 574 DSGT 577
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 208/393 (52%), Gaps = 22/393 (5%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S+ N+LL A+ K KF+ V + ++M+R I NL ++N ++N C+ +++ A ++
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT + L++GYC I A A+ MVE G P+ +TF TLI G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRIS---DAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
S A+ + + M G +VTY ++NGLC G +D A L ++M A+ ++ NV
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V + +I+ CK + + A LF ++ +G+ P+VITY++LI C R DA + +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M++R + P+V T+N LI +EG + + +E++ + + TY+ L+ C +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
+A + + M + +PN+VTYN LI GFC+ ++++ L E+ ++GL+ N T
Sbjct: 381 LDEAKHMFELMI---SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 510 Y----------------QIVREEMMEKGFIPDI 526
Y Q+V ++M+ G P+I
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 200/369 (54%), Gaps = 15/369 (4%)
Query: 142 AGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGK 201
+GDY ++LR + K +D ++ M + R ++ FN +L+ + K K
Sbjct: 50 SGDY---------REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK 100
Query: 202 LNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVT 261
+ + E M+ LG+S + TYNILI+ +C++ I A A+ M++ G P+ VT
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS---LALALLGKMMKLGYEPSIVT 157
Query: 262 FNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMM 321
++L++G+C + IS A+ + ++M G +T+ +LI+GL + K EAVAL D M+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 322 ASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRME 381
G +PN+VT ++NG CK+ ++ A L + + + +V+ Y+T+ID+ CK +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 382 DAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILV 441
DA + M ++GV P+V TY+ LI+ L ++++++ + +VT+N L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 442 GALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEK 501
A K+GK +A L DEM K + P+I TY+ LI GFC +L++A + ++ K
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 502 GLIPNQTTY 510
PN TY
Sbjct: 395 DCFPNVVTY 403
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 162/296 (54%), Gaps = 5/296 (1%)
Query: 234 KGGIGKMYKADAV--FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
+ G+ M DA+ F MV++ LP+ FN L+ K + + + E+M GI+
Sbjct: 58 RNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
+ TYN LIN C ++ A+AL +MM G +P++VT ++L+NG+C K + A L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
D + E G P IT+ TLI + +A A+ + M+ RG P++ TY ++ GL +
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
G+++ N++N++ + A +V Y+ ++ +LCK A++L E ME + PN
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE---MENKGVRPN 294
Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
++TY+ LI C + DA+ LL++++E+ + PN T+ + + +++G + + E
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 61 HSLLLTGRLLHSLVVAKK-YPKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNS 116
H L + + L+++K +P + ++ ++ F K + +F +S L N+
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNT 435
Query: 117 IIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKE 176
+ L+ + + FK+ G+ ++++ N LL L K GK E V++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 177 MKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGG 236
++R ++E + ++N ++ G+CKAGK+ D+ + GV P V+ YN +I G+C+K
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK-- 553
Query: 237 IGKMYKADAVFKDMVENGILPNEVT 261
G +ADA+F+ M E+G LP+ T
Sbjct: 554 -GLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 206/381 (54%), Gaps = 6/381 (1%)
Query: 141 RAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAG 200
R + G + + ++ +L+ + K G+ + ++M+ R+I+L+ ++ +++GLCK G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEV 260
L+ A ++ +M+ G ++ Y LI G+C G + + +DM++ I P+ V
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG---RWDDGAKLLRDMIKRKITPDVV 318
Query: 261 TFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEM 320
F+ LID F K+ + A ++ +EM GI+ VTY SLI+G C + +LD+A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 321 MASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRM 380
++ G PN+ T N LING+CK L++ LF +S +G+ +TYNTLI +C+ G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 381 EDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
E A + M+ R V PD+ +Y L+ GL G E I ++ + M + YNI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
+ +C K A L + + P++ TYN++I G C+KG L +A+ L ++ E
Sbjct: 499 IHGMCNASKVDDAWDLF---CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 501 KGLIPNQTTYQIVREEMMEKG 521
G PN TY I+ + +G
Sbjct: 556 DGHSPNGCTYNILIRAHLGEG 576
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 205/393 (52%), Gaps = 6/393 (1%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
E R + G K ++++ N L+ L GK D + M + N ++ VL
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 195 GLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENG 254
+CK+G+ A +++ M+ + V Y+I+IDG CK G + + +F +M G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN---LFNEMEIKG 277
Query: 255 ILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAV 314
+ + + TLI GFC K+ +M I VV +++LI+ +GKL EA
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 315 ALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAY 374
L EM+ G+ P+ VT +LI+GFCK+ ++KA + D + +G P++ T+N LI+ Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGL 434
CK ++D + M RGV+ D TYN LI G G +E + + E+V+ +R +
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 435 VTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGL 494
V+Y IL+ LC +G+ +KA+ + + K+EK K +I YN++I G C K++DA L
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFE---KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 495 LNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
L KG+ P+ TY I+ + +KG + + +
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 204/413 (49%), Gaps = 49/413 (11%)
Query: 148 KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASD 207
+ ++ ++L + + +++ V + K+M+ + I NL + + ++N C+ KL+ A
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 208 IMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLID 267
M + LG P VT++ LI+G C +G ++ +A + MVE G P +T N L++
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEG---RVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 268 GF-----------------------------------CKDENISAAMKVFEEMGSHGIAA 292
G CK + AM++ +M I
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
V Y+ +I+GLC DG LD A L +EM G K +++ LI GFC + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
D+ ++ ++P V+ ++ LID + KEG++ +A + M+ RG+ PD TY LI G +E
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLD---EMF-KMEKEKK 468
++ ++++ +V+ G + T+NIL+ CK +L+D E+F KM
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK-------ANLIDDGLELFRKMSLRGV 418
Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
+ VTYN LI+GFC+ GKLE A L E++ + + P+ +Y+I+ + + + G
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 171/303 (56%), Gaps = 4/303 (1%)
Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
V++ + L+ VKEGK + E ++KEM +R I + ++ +++G CK +L+KA+ +++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
M S G P + T+NILI+GYCK I + +F+ M G++ + VT+NTLI GFC
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLE---LFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
+ + A ++F+EM S + +V+Y L++GLC +G+ ++A+ + +++ S ++ ++
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
N +I+G C V+ A LF + +G+ P V TYN +I CK+G + +A + M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKS 450
+ G P+ TYN LI EG+ ++ E+ G T ++V L DG+
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRL 612
Query: 451 KKA 453
KK+
Sbjct: 613 KKS 615
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 12/313 (3%)
Query: 201 KLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF---KDMVENGILP 257
K + A D+ ++M P+++ ++ L + + + D V K M GI
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLF------SVVARTKQYDLVLDLCKQMELKGIAH 105
Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
N T + +I+ C+ +S A ++ G VT+++LINGLC++G++ EA+ L
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
D M+ G KP ++T NAL+NG C V A +L D + E G P+ +TY ++ CK
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
G+ A + M +R + D Y+ +I GL ++G+++ N+ NE+ G +A ++ Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
L+ C G+ LL +M K K P++V ++ LI F ++GKL +A L E
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMI---KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 498 LLEKGLIPNQTTY 510
++++G+ P+ TY
Sbjct: 343 MIQRGISPDTVTY 355
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 293 GVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF 352
G V+Y + VD K D+AV L EM S +P ++ + L + + K + L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 353 DDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
+ +G++ ++ T + +I+ C+ ++ AF+ ++ G PD T++ LI GL E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 413 GNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNI 472
G V +++ +V G + L+T N LV LC +GK AV L+D M + + PN
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ---PNE 212
Query: 473 VTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
VTY ++K C+ G+ A LL ++ E+ + + Y I+ + + + G
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 43/84 (51%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G+K V + N ++ L K+G + + ++++M+ N ++N ++ G K+
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 206 SDIMEDMKSLGVSPKVVTYNILID 229
+ ++E++K G S T +++D
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVVD 605
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 253/494 (51%), Gaps = 17/494 (3%)
Query: 37 FNSDADPVLILRYFCWSTKELRAS-HSLLLTGRL--LHSLVVAKKYPKIRSF---LHMFV 90
F+ D +R FC + LR HSL L +V ++ P I F L++
Sbjct: 24 FSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIA 83
Query: 91 KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
K KF V + L S + ++LM + ++ +P+L + G +
Sbjct: 84 KMKKFDVVINLCDHLQIMGVS--HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPD 141
Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
+++ L+ + E+ + +M I+ ++ + +++ LCK G +N A + +
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
M++ G+ P VV Y L++G C G+ AD++ + M + I P+ +TFN LID F
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNS---GRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 271 KDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV 330
K+ A +++ EM IA + TY SLING C++G +DEA + M G P+VV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 331 TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSM 390
+LINGFCK K V+ A +F ++S++GL+ + ITY TLI + + G+ A + + M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 391 LDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN---NGMRAGLVTYNILVGALCKD 447
+ RGV P++ TYN L+ L G V+ I ++ +G+ + TYN+L+ LC +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 448 GKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQ 507
GK +KA+ + ++M K E + I+TY ++I+G C+ GK+++A L L KG+ PN
Sbjct: 439 GKLEKALMVFEDMRKREMDIG---IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 508 TTYQIVREEMMEKG 521
TY + + +G
Sbjct: 496 VTYTTMISGLFREG 509
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 188/358 (52%), Gaps = 20/358 (5%)
Query: 106 STCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEG 165
+T DSLC+N + + F + +YG++ V+ L+ L G
Sbjct: 181 TTIIDSLCKNGHV--------------NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 166 KFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYN 225
++ D + + + M +R+I+ ++ +FN +++ K GK A ++ +M + ++P + TY
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 226 ILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEM 285
LI+G+C +G + +A +F M G P+ V + +LI+GFCK + + AMK+F EM
Sbjct: 287 SLINGFCMEGCVD---EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 286 GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G+ +TY +LI G GK + A + M++ G+ PN+ T N L++ C V
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
+KA ++F+D+ ++ G++P++ TYN L+ C G++E A + M R + + TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
+I G+ + G V+ N+ L + G++ +VTY ++ L ++G +A L +M
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
+ +A + M++ LP + + L+ +++ + V N+ + L G+ L T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
+L+ C+ + A S L +M K+ E P+IVT+ LI GFC ++E+A ++N++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFE---PDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 499 LEKGLIPNQTTYQIVREEMMEKGFI 523
+E G+ P+ Y + + + + G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHV 193
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 217/393 (55%), Gaps = 23/393 (5%)
Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
L R ++++ K +D ++ +M + R ++ F+ +L+ + K K + + E M++LG
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
+S + TY+I I+ +C++ ++ A A+ M++ G P+ VT N+L++GFC IS
Sbjct: 106 ISHNLYTYSIFINYFCRRS---QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
A+ + ++M G VT+ +L++GL K EAVAL + M+ G +P++VT A+I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
NG CK+ + A L + + + + V+ YNT+ID CK M+DAF + N M +G+
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
PDV TYN LI+ L G ++++++ + LV +N L+ A K+GK +A L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY------ 510
DEM K + +P++V YN LIKGFC+ ++E+ + E+ ++GL+ N TY
Sbjct: 343 YDEMVK--SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 511 ----------QIVREEMMEKGFIPDIEGHMYNI 533
Q+V ++M+ G PDI YNI
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDI--MTYNI 431
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 7/379 (1%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+ G + ++ L+ L + K + + + M + + +L ++ V+NGLCK G+ +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
A +++ M+ + VV YN +IDG CK M A +F M GI P+ T+N
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCK---YKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
LI C S A ++ +M I +V +N+LI+ +GKL EA L DEM+ S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 324 -GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
P+VV N LI GFCK K VE+ +F ++S++GL + +TY TLI + + ++
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 383 AFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVG 442
A + M+ GV PD+ TYN L+ GL GNVE + + M+ +VTY ++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 443 ALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKG 502
ALCK GK + L + + PN+VTY ++ GFC+KG E+A+ L E+ E G
Sbjct: 470 ALCKAGKVEDGWDLF---CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 503 LIPNQTTYQIVREEMMEKG 521
+PN TY + + G
Sbjct: 527 PLPNSGTYNTLIRARLRDG 545
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 227/460 (49%), Gaps = 16/460 (3%)
Query: 69 LLHSLVVAKKYPKIRSF---LHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM 123
L +V ++ +P I F L K KF V ++ + S +L SI I+
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY-- 119
Query: 124 LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIE 183
+ + + L + G S+++ N LL + + + +M +
Sbjct: 120 --FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 184 LNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKA 243
+ +F +++GL + K ++A ++E M G P +VTY +I+G CK+G + A
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG---EPDLA 234
Query: 244 DAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLING 303
+ M + I + V +NT+IDG CK +++ A +F +M + GI V TYN LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 304 LCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK-KLVEKARVLFDDISEQGLSP 362
LC G+ +A L +M+ + P++V NALI+ F K+ KLVE ++ + + + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
V+ YNTLI +CK R+E+ + M RG++ + TY LI G + + + + +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGF 482
++V++G+ ++TYNIL+ LC +G + A+ + + M+K +IVTY +I+
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE---YMQKRDMKLDIVTYTTMIEAL 471
Query: 483 CQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
C+ GK+ED L L KG+ PN TY + KG
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 204/409 (49%), Gaps = 36/409 (8%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++LL A+ K KF+ V + ++M+ I NL +++ +N C+ +L+ A I+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT N L++G+C I + A A+ MVE G P+ VTF TL+ G
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISE---AVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
+ S A+ + E M G +VTY ++INGLC G+ D A+ L ++M ++ +V
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
V N +I+G CK K ++ A LF+ + +G+ P V TYN LI C GR DA + +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGM-RAGLVTYNILVGALCKDG 448
ML++ + PD+ +N LI +EG + + +E+V + +V YN L+ CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 449 KSKKAVSLLDEM-------------------------------FK-MEKEKKWPNIVTYN 476
+ ++ + + EM FK M + P+I+TYN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 477 VLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+L+ G C G +E A + + ++ + + TY + E + + G + D
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 192/369 (52%), Gaps = 7/369 (1%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G + +++ ++ L K G+ + + +M++ +IE ++ +N +++GLCK ++ A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTL 265
D+ M++ G+ P V TYN LI C G+ A + DM+E I P+ V FN L
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCN---YGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 266 IDGFCKDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
ID F K+ + A K+++EM S VV YN+LI G C +++E + + EM G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 325 LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAF 384
L N VT LI+GF + + + A+++F + G+ P ++TYN L+D C G +E A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 385 AMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
+ M R + D+ TY +I L + G VE ++ L G++ +VTY ++
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 445 CKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
C+ G ++A +L EM +++ PN TYN LI+ + G + L+ E+ G
Sbjct: 507 CRKGLKEEADALFVEM---KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 505 PNQTTYQIV 513
+ +T+ +V
Sbjct: 564 GDASTFGLV 572
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 186/334 (55%), Gaps = 4/334 (1%)
Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
K +P L + +++ V+ N ++ L K +D ++ +M+ + I+ ++
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
++N +++ LC G+ + AS ++ DM ++P +V +N LID + K+G K+ +A+ ++
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG---KLVEAEKLY 343
Query: 248 KDMVEN-GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
+MV++ P+ V +NTLI GFCK + + M+VF EM G+ VTY +LI+G
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
D A + +M++ G+ P+++T N L++G C VE A V+F+ + ++ + ++T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
Y T+I+A CK G++ED + + S+ +GV P+V TY +++G R+G E + E+
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM 460
+G TYN L+ A +DG + L+ EM
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 175/325 (53%), Gaps = 7/325 (2%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
F+ F + G+K V + N L+ L G++ D + +M + I +L FN +++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 195 GLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
K GKL +A + ++M KS P VV YN LI G+CK ++ + VF++M +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK---YKRVEEGMEVFREMSQR 385
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
G++ N VT+ TLI GF + + A VF++M S G+ ++TYN L++GLC +G ++ A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
+ + + M +K ++VT +I CK VE LF +S +G+ P+V+TY T++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
+C++G E+A A+ M + G LP+ TYN LI R+G+ ++ E+ + G
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 434 LVTYNILVGALCKDGKSKKAVSLLD 458
T+ LV + DG+ K S LD
Sbjct: 566 ASTFG-LVTNMLHDGRLDK--SFLD 587
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 41/230 (17%)
Query: 84 SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
+ +H F + + +F + SD + + + ++L+ N F+
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQM--VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+K +++ ++ AL K GK ED ++ + + ++ N+ ++ +++G C+ G
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
+A + +MK G P TYN
Sbjct: 514 EADALFVEMKEDGPLPNSGTYN-------------------------------------- 535
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
TLI +D + +A+ ++ +EM S G A T+ L+ + DG+LD++
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS 584
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 225/443 (50%), Gaps = 44/443 (9%)
Query: 104 ALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVK 163
L+T + LC N + D ++L R + G + + ++ +L + K
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVL--------------IDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 164 EGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVT 223
G+ + ++M+ R I+L+ ++ +++GLCK G L+ A ++ +M+ G ++T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFE 283
YN LI G+C G + + +DM++ I PN VTF+ LID F K+ + A ++ +
Sbjct: 301 YNTLIGGFCNAG---RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 284 EMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKK 343
EM GIA +TYNSLI+G C + +L+EA+ + D M++ G P+++T N LING+CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 344 LVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYN 403
++ LF ++S +G+ + +TYNTL+ +C+ G++E A + M+ R V PD+ +Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 404 CLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM--- 460
L+ GL G +E I ++ + M + Y I++ +C K A L +
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 461 -FKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQI-VR---- 514
K++ YN++I C+K L A+ L ++ E+G P++ TY I +R
Sbjct: 538 GVKLDAR-------AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 515 -----------EEMMEKGFIPDI 526
EEM GF D+
Sbjct: 591 DDDATTAAELIEEMKSSGFPADV 613
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 213/427 (49%), Gaps = 13/427 (3%)
Query: 69 LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTC----SDSLCRNSIIIDMLML 124
L ++ ++ P + F +F K + L+ C S + + + +++
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELV---LALCKQMESKGIAHSIYTLSIMIN 131
Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
+ + K F + G + + N LL L E + + + M +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 185 NLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKAD 244
L + N ++NGLC GK++ A +++ M G P VTY +++ CK G + A
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG---QTALAM 248
Query: 245 AVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGL 304
+ + M E I + V ++ +IDG CKD ++ A +F EM G A ++TYN+LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 305 CVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSV 364
C G+ D+ L +M+ + PNVVT + LI+ F K+ + +A L ++ ++G++P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 365 ITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNE 424
ITYN+LID +CKE R+E+A M + M+ +G PD+ T+N LI G + ++ + E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
+ G+ A VTYN LV C+ GK + A L EM + P+IV+Y +L+ G C
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV---SRRVRPDIVSYKILLDGLCD 485
Query: 485 KGKLEDA 491
G+LE A
Sbjct: 486 NGELEKA 492
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 210/387 (54%), Gaps = 8/387 (2%)
Query: 128 KNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLD 187
K+ + L E ++ + +K + + ++ L K+G ++ ++ EM+ + + ++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 188 SFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVF 247
++N ++ G C AG+ + + ++ DM +SP VVT+++LID + K+G K+ +AD +
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG---KLREADQLL 356
Query: 248 KDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
K+M++ GI PN +T+N+LIDGFCK+ + A+++ + M S G ++T+N LING C
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
++D+ + L EM G+ N VT N L+ GFC+ +E A+ LF ++ + + P +++Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
L+D C G +E A + + + D+ Y +I G+ V+ ++ L
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF-KMEKEKKWPNIVTYNVLIKGFCQKG 486
G++ YNI++ LC+ K ++S D +F KM +E P+ +TYN+LI+
Sbjct: 537 KGVKLDARAYNIMISELCR----KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 487 KLEDANGLLNELLEKGLIPNQTTYQIV 513
A L+ E+ G + +T ++V
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 165/298 (55%), Gaps = 3/298 (1%)
Query: 147 LKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKAS 206
+ +V++ + L+ + VKEGK + + + KEM +R I N ++N +++G CK +L +A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 207 DIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLI 266
+++ M S G P ++T+NILI+GYCK I + +F++M G++ N VT+NTL+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE---LFREMSLRGVIANTVTYNTLV 445
Query: 267 DGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLK 326
GFC+ + A K+F+EM S + +V+Y L++GLC +G+L++A+ + ++ S ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 327 PNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAM 386
++ +I+G C V+ A LF + +G+ YN +I C++ + A +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 387 RNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGAL 444
M + G PD TYN LI + + ++ E+ ++G A + T +++ L
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 48/296 (16%)
Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
A+ +F +M V+ +N L + + + + +AL +M + G+ ++ T + +IN
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 338 GFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLP 397
FC+ + + A I + G P + +NTL++ C E R+ +A + + M++ G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 398 DVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLL 457
+ T N L+ GL G V +++ +V G + VTY ++ +CK G++ A+ LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 458 DEMF--------------------------------KMEKEKKWPNIVTYNVLIKGFCQK 485
+M +ME + +I+TYN LI GFC
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 486 GKLEDANGLLNELLEKGLIPNQTTYQI----------VRE------EMMEKGFIPD 525
G+ +D LL +++++ + PN T+ + +RE EMM++G P+
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 49/487 (10%)
Query: 68 RLLHSLVVAKKYPKIR---SFLHMFVKNGKFTSVSTIFHALSTCSD------------SL 112
R+L+ +++ YP + S +H + +G + + + C S+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 113 C--RNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDV 170
C ++S+ D+L LA +A+ G+ + ++ + R L GK+E
Sbjct: 418 CGDKDSLNCDLLDLAE----------KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 171 EYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDG 230
V +EM + + +++ VLN LC A K+ A + E+MK G+ V TY I++D
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 231 YCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGI 290
+CK G I + K F +M E G PN VT+ LI + K + +S A ++FE M S G
Sbjct: 528 FCKAGLIEQARKW---FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 291 AAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS----------------GLKPNVVTSNA 334
+VTY++LI+G C G++++A + + M S +PNVVT A
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 335 LINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRG 394
L++GFCK VE+AR L D +S +G P+ I Y+ LID CK G++++A ++ M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 395 VLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAV 454
+ TY+ LI + + ++++++ N +V Y ++ LCK GK+ +A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 455 SLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 514
L M ME++ PN+VTY +I GF GK+E LL + KG+ PN TY+++
Sbjct: 765 KL---MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 515 EEMMEKG 521
+ + G
Sbjct: 822 DHCCKNG 828
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 224/461 (48%), Gaps = 38/461 (8%)
Query: 73 LVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKP 132
L A KY K S + + G ST L + LC S + LA+
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL----NYLCNAS----KMELAF------ 503
Query: 133 HLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
L FE KR G L + V + ++ + K G E + EM+ N+ ++ +
Sbjct: 504 -LLFEEMKRGG---LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK---------- 242
++ KA K++ A+++ E M S G P +VTY+ LIDG+CK G + K +
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 243 ---ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
D FK +N PN VT+ L+DGFCK + A K+ + M G + Y++
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
LI+GLC GKLDEA ++ EM G + T ++LI+ + K K + A + + E
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVR 419
+P+V+ Y +ID CK G+ ++A+ + M ++G P+V TY +I G G +E
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 420 NIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP-NIVTYNVL 478
++ + + G+ VTY +L+ CK+G A +LL+EM K+ WP + Y +
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM----KQTHWPTHTAGYRKV 855
Query: 479 IKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMME 519
I+GF + ++ GLL+E+ + P + Y+++ + +++
Sbjct: 856 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/620 (22%), Positives = 253/620 (40%), Gaps = 123/620 (19%)
Query: 5 ANSTIEDITELIRNHHWSKLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLL 64
A S ++D+ + + ++++++ A P ++ +F W+ +++ H+
Sbjct: 107 AVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAP 166
Query: 65 LTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLML 124
+ L+ +V FL + K +F +++L+
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEF-------------LNVLVR 208
Query: 125 AYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIEL 184
+ +N + E R D+ + S + N L++A +K + + +++EM + +
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268
Query: 185 N-----------------------LDSFNFV---------LNGLCKAGKLNKASDIMEDM 212
+ +++ NFV ++GLC+A +A D + M
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 213 KSLGVSPKVVTY-----------------------------------NILIDGYCKKGGI 237
++ P VVTY N L+ YC G
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388
Query: 238 GKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN------ISAAMKVFEEMGSHGIA 291
YK + K MV+ G +P V +N LI C D++ + A K + EM + G+
Sbjct: 389 SYAYK---LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
+ +S LC GK ++A ++ EM+ G P+ T + ++N C +E A +L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
F+++ GL V TY ++D++CK G +E A N M + G P+V TY LI +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM----------- 460
V + +++ G +VTY+ L+ CK G+ +KA + + M
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 461 -FKM-EKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY-------- 510
FK + + PN+VTY L+ GFC+ ++E+A LL+ + +G PNQ Y
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 511 --------QIVREEMMEKGF 522
Q V+ EM E GF
Sbjct: 686 KVGKLDEAQEVKTEMSEHGF 705
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 11/305 (3%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
N I+ D L+ K K E ++G +++ + + L+ K + + V
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
+M N+ + +++GLCK GK ++A +M+ M+ G P VVTY +IDG+
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF--- 789
Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
G IGK+ + + M G+ PN VT+ LID CK+ + A + EEM
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
Y +I G + + E++ L DE+ P + LI+ K + +E A L ++
Sbjct: 850 AGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 355 ISEQGLSPSVI----TYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLS 410
++ S +++ TYN+LI++ C ++E AF + + M +GV+P++ ++ LI GL
Sbjct: 908 VAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965
Query: 411 REGNV 415
R +
Sbjct: 966 RNSKI 970
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 189/478 (39%), Gaps = 71/478 (14%)
Query: 116 SIIIDMLMLAYVKNMKPHLGFEAFKRAG-DYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
S++I++L L +P F AG G K + N L+ +V++ + E
Sbjct: 133 SLVIEVLRLI----ARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
++++ E+ + N ++ C+ G + A + + +K P TYN LI + K
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
++ A + ++M + + T CK A+ + E +
Sbjct: 249 D---RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDT 302
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
V Y LI+GLC +EA+ + M A+ PNVVT + L+ G KK + + + + +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG------ 408
+ +G PS +N+L+ AYC G A+ + M+ G +P YN LI
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 409 -----------------------------------LSREGNVEGVRNIMNELVNNGMRAG 433
L G E +++ E++ G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
TY+ ++ LC K + A L +E M++ ++ TY +++ FC+ G +E A
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEE---MKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 494 LLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHMYNISG 535
NE+ E G PN TY + E M+ +G +P+I + I G
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 36/266 (13%)
Query: 126 YVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELN 185
Y K + L + + + +V+ +++ L K GK ++ + + M+ + + N
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 186 LDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGI-------- 237
+ ++ +++G GK+ +++E M S GV+P VTY +LID CK G +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 238 ------------GKMYKADAVFKDMVENGILPNEV----------TFNTLIDGFCKDENI 275
G + K+ +E+ L +E+ + LID K + +
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 276 SAAMKVFEEMGSHGIAAGVV----TYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVT 331
A+++ EE+ + +A +V TYNSLI LC+ K++ A L EM G+ P + +
Sbjct: 899 EMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 332 SNALINGFCKKKLVEKARVLFDDISE 357
+LI G + + +A +L D IS
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFISH 982
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 248/552 (44%), Gaps = 82/552 (14%)
Query: 42 DPVLILRYFCWSTKELRASHSLLLTGRLLHSLVVAKKYPKIRSFL-HMFVKNGKFTSVST 100
DP L ++F WS HS+ + H L A+ Y S L M +
Sbjct: 121 DPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDV 180
Query: 101 IFHALSTCS------DSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSC 154
++ + C D+L S++ID+ ML + F + + + SC
Sbjct: 181 LWSTRNVCVPGFGVFDAL--FSVLIDLGML--------EEAIQCFSKMKRFRVFPKTRSC 230
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
N LL K GK +DV+ +K+M + ++N +++ +CK G + A + E+MK
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 215 LGVSPKVVTYNILIDGYCKKGGI--------------------------------GKMYK 242
G+ P VTYN +IDG+ K G + GK+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 243 ADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN 302
+++M NG+ PN V+++TL+D FCK+ + A+K + +M G+ TY SLI+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 303 GLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSP 362
C G L +A L +EM+ G++ NVVT ALI+G C + +++A LF + G+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 363 SVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIM 422
++ +YN LI + K M+ A + N + RG+ PD+ Y I GL +E + +M
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 423 NELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKK-------------- 468
NE+ G++A + Y L+ A K G + + LLDEM +++ E
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 469 -------------------WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTT 509
N + +I G C+ ++E A L ++++KGL+P++T
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 510 YQIVREEMMEKG 521
Y + + ++G
Sbjct: 651 YTSLMDGNFKQG 662
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 216/458 (47%), Gaps = 46/458 (10%)
Query: 84 SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIII-DMLMLAYVKNMKPHLGFEAFKRA 142
S + F K G+ F + D C +I + L+ + K K +G E ++
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMK---DMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
GLK +V+S + L+ A KEG + Y +M+R + N ++ +++ CK G L
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTF 262
+ A + +M +GV VVTY LIDG C +M +A+ +F M G++PN ++
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA---ERMKEAEELFGKMDTAGVIPNLASY 475
Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
N LI GF K +N+ A+++ E+ GI ++ Y + I GLC K++ A + +EM
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 323 SGLKPN-----------------------------------VVTSNALINGFCKKKLVEK 347
G+K N VVT LI+G CK KLV K
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595
Query: 348 ARVLFDDISEQ-GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
A F+ IS GL + + +ID CK+ ++E A + M+ +G++PD + Y L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 407 AGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKE 466
G ++GNV + +++ GM+ L+ Y LV L + +KA S L+EM E
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI---GE 712
Query: 467 KKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
P+ V ++K + G +++A L + L++ L+
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 205/396 (51%), Gaps = 41/396 (10%)
Query: 150 SVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIM 209
S++ ++LL A+ K K+E V +++ ++ I +L SF +++ C+ +L+ A +
Sbjct: 78 SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137
Query: 210 EDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGF 269
M LG P +VT+ L++G+C + + Y+A ++ +V G PN V +NT+ID
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCH---VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 270 CKDENISAAMKVFEEMGSHGIAAGVVTYNSLIN---------------------GLCVD- 307
C+ ++ A+ V + M GI VVTYNSLI G+ D
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 308 -------------GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
G+L EA +EM+ + PN+VT N+LING C L+++A+ + +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
+ +G P+ +TYNTLI+ YCK R++D + M GV D TYN L G + G
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
++ +V+ G+ + T+NIL+ LC GK KA+ L+++ +K K I+T
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL---QKSKTVVGIIT 431
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
YN++IKG C+ K+EDA L L KG+ P+ TY
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 227/464 (48%), Gaps = 34/464 (7%)
Query: 47 LRYFCWSTKELRASH---SLLLTGRLLHSLVVAKKYPKIRS-FLHMFVKNGKFTSVSTIF 102
L FC ++ SH S++ RLL ++ KY + S F H+ + +S
Sbjct: 64 LTLFC----DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-----EMLGISHDL 114
Query: 103 HALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALV 162
++ +T D CR + + L + G + S+++ L+
Sbjct: 115 YSFTTLIDCFCRCA--------------RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
+F + + ++ E N+ +N +++ LC+ G++N A D+++ MK +G+ P VV
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
TYN LI G G + + DM+ GI P+ +TF+ LID + K+ + A K +
Sbjct: 221 TYNSLITRLFHSGTWGV---SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
EM + +VTYNSLINGLC+ G LDEA + + +++ G PN VT N LING+CK
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
K V+ + +S G+ TYNTL YC+ G+ A + M+ GV PD+ T+
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
N L+ GL G + + +L + G++TYNI++ LCK K + A L
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF---CS 454
Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELL-EKGLIP 505
+ + P+++TY ++ G +K +A+ L ++ E GL+P
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 191/367 (52%), Gaps = 8/367 (2%)
Query: 158 LRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV 217
LR+ + KF D ++ +M ++ F+ +L + K K + ++ LG+
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110
Query: 218 SPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISA 277
S + ++ LID +C+ ++ A + M++ G P+ VTF +L++GFC
Sbjct: 111 SHDLYSFTTLIDCFCR---CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 278 AMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALIN 337
AM + +++ G VV YN++I+ LC G+++ A+ + M G++P+VVT N+LI
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 338 G-FCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
F AR+L D+ G+SP VIT++ LID Y KEG++ +A N M+ R V
Sbjct: 228 RLFHSGTWGVSARIL-SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSL 456
P++ TYN LI GL G ++ + ++N LV+ G VTYN L+ CK + + +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 457 LDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREE 516
L M ++ + TYN L +G+CQ GK A +L ++ G+ P+ T+ I+ +
Sbjct: 347 L---CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Query: 517 MMEKGFI 523
+ + G I
Sbjct: 404 LCDHGKI 410
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 379 RMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYN 438
+ DA + M + LP + ++ L+ +++ E V ++ L G+ L ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 439 ILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNEL 498
L+ C+ + A+S L +M K+ E P+IVT+ L+ GFC + +A L++++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFE---PSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 499 LEKGLIPNQTTYQIVREEMMEKGFIP---DIEGHM 530
+ G PN Y + + + EKG + D+ HM
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 211/402 (52%), Gaps = 6/402 (1%)
Query: 111 SLCR-NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED 169
S CR N +I L+ +++N + K + G+ + N L+ L K + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 170 VEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILID 229
EM ++ N ++ ++G +A + A +++M+ GV P V LI+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 230 GYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHG 289
YCKKG K+ +A + ++ MV+ GIL + T+ L++G K++ + A ++F EM G
Sbjct: 566 EYCKKG---KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 290 IAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKAR 349
IA V +Y LING G + +A ++ DEM+ GL PNV+ N L+ GFC+ +EKA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 350 VLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGL 409
L D++S +GL P+ +TY T+ID YCK G + +AF + + M +G++PD Y L+ G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 410 SREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK-K 468
R +VE I G + +N L+ + K GK++ +L+ + ++
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 469 WPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTY 510
PN VTYN++I C++G LE A L +++ L+P TY
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 193/379 (50%), Gaps = 22/379 (5%)
Query: 163 KEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVV 222
KEG E + ++ M + ++ ++ G C+ + + +++ +MK +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 223 TYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
TY ++ G C G + Y + K+M+ +G PN V + TLI F ++ AM+V
Sbjct: 419 TYGTVVKGMCSSGDLDGAYN---IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 283 EEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKK 342
+EM GIA + YNSLI GL ++DEA + EM+ +GLKPN T A I+G+ +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 343 KLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
A ++ E G+ P+ + LI+ YCK+G++ +A + SM+D+G+L D TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
L+ GL + V+ I E+ G+ + +Y +L+ K G +KA S+ DEM
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV- 654
Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIV--------- 513
+E PN++ YN+L+ GFC+ G++E A LL+E+ KGL PN TY +
Sbjct: 655 --EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 514 -------REEMMEKGFIPD 525
+EM KG +PD
Sbjct: 713 LAEAFRLFDEMKLKGLVPD 731
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 228/495 (46%), Gaps = 61/495 (12%)
Query: 55 KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCR 114
KE + + L+ L AK+ + RSFL V+NG L
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG------------------LKP 520
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
N+ + Y++ + + K + G+ + + C L+ K+GK + Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
+ M + I + ++ ++NGL K K++ A +I +M+ G++P V +Y +LI+G+ K
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK- 639
Query: 235 GGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGV 294
+G M KA ++F +MVE G+ PN + +N L+ GFC+ I A ++ +EM G+
Sbjct: 640 --LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLF-- 352
VTY ++I+G C G L EA L DEM GL P+ L++G C+ VE+A +F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 353 ------------------------------------DDISEQGLSPSVITYNTLIDAYCK 376
D ++ P+ +TYN +ID CK
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 377 EGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVT 436
EG +E A + + M + ++P V TY L+ G + G + + +E + G+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 437 YNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWP--NIVTYNVLIKGFCQKGKLEDANGL 494
Y++++ A K+G + KA+ L+D+MF +I T L+ GF + G++E A +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 495 LNELLEKGLIPNQTT 509
+ ++ IP+ T
Sbjct: 938 MENMVRLQYIPDSAT 952
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 186/389 (47%), Gaps = 35/389 (8%)
Query: 157 LLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLG 216
L+ L K + ED + + EM + L+ +++ +++GL K + A ++ +M S G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 217 VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENIS 276
++ K Y+ I C G M KA A+F M+ +G++P + +LI+G+C+++N+
Sbjct: 343 INIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 277 AAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALI 336
++ EM I TY +++ G+C G LD A + EM+ASG +PNVV LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 337 NGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVL 396
F + A + ++ EQG++P + YN+LI K RM++A + M++ G+
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 397 PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVS- 455
P+ TY I+G + E+ G+ V L+ CK GK +A S
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 456 ------------------LLDEMFK-------------MEKEKKWPNIVTYNVLIKGFCQ 484
L++ +FK M + P++ +Y VLI GF +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIV 513
G ++ A+ + +E++E+GL PN Y ++
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/610 (23%), Positives = 251/610 (41%), Gaps = 91/610 (14%)
Query: 11 DITELIRNHHW------SKLKNTDPNTVILQLFNSDA--DPVLILRYFCWSTKELRASHS 62
+I +++ +W S L V+L + S DP +L +F W +
Sbjct: 37 EIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQK 96
Query: 63 LLLTGRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNS---III 119
L L L + K S + ++ V+ ++ ++ CS S ++
Sbjct: 97 LDSFSFLALDLCNFGSFEKALSVVERMIERN--WPVAEVWSSIVRCSQEFVGKSDDGVLF 154
Query: 120 DMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKR 179
+L Y+ F + L + C LL AL++ + + VYK M
Sbjct: 155 GILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE 214
Query: 180 RRIELNLDSFNFVLNGLCKAGKLNKASDIM---------------------EDMKSLGVS 218
R + ++ +++ ++ C+AG + D++ E M G+
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV 274
Query: 219 PKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAA 278
P TY++LIDG CK I ++ A ++ +M G+ + T++ LIDG K N AA
Sbjct: 275 PLKYTYDVLIDGLCK---IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 279 MKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALING 338
+ EM SHGI Y+ I + +G +++A AL D M+ASGL P +LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 339 FCKKKLVEKARVLFDDISEQ-----------------------------------GLSPS 363
+C++K V + L ++ ++ G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 364 VITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMN 423
V+ Y TLI + + R DA + M ++G+ PD+ YN LI GLS+ ++ R+ +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 424 ELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFC 483
E+V NG++ TY + + + A + EM + PN V LI +C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568
Query: 484 QKGKLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIE 527
+KGK+ +A ++++G++ + TY + + EM KG PD+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 528 GHMYNISGTS 537
+ I+G S
Sbjct: 629 SYGVLINGFS 638
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 6/370 (1%)
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
L+ Y + G+E + S + +++ + G + + KEM
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
N+ + ++ + + A ++++MK G++P + YN LI G K +M
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA---KRMD 504
Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
+A + +MVENG+ PN T+ I G+ + ++A K +EM G+ V LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
N C GK+ EA + M+ G+ + T L+NG K V+ A +F ++ +G++
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
P V +Y LI+ + K G M+ A ++ + M++ G+ P+V YN L+ G R G +E + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
++E+ G+ VTY ++ CK G +A L DE M+ + P+ Y L+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSFVYTTLVDG 741
Query: 482 FCQKGKLEDA 491
C+ +E A
Sbjct: 742 CCRLNDVERA 751
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
+F R G K + ++ N ++ L KEG E + ++ +M+ + + ++ +LNG
Sbjct: 796 SFDRFG----KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-MYKADAVF-KDMVENGI 255
K G+ + + ++ + G+ P + Y+++I+ + K+G K + D +F K+ V++G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
+ T L+ GF K + A KV E M T LIN C+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 9/161 (5%)
Query: 91 KNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSS 150
K G + +FH + + L I L+ Y K + F F A G++
Sbjct: 817 KEGNLEAAKELFHQMQNAN--LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRI-----ELNLDSFNFVLNGLCKAGKLNKA 205
+ + ++ A +KEG + +M + +L++ + +L+G K G++ A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 206 SDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAV 246
+ME+M L P T LI+ C + +ADAV
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESCISS--NQRVEADAV 973
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 212/398 (53%), Gaps = 10/398 (2%)
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFED-VEYVYKEMKRRRIELNLDSFNFV 192
LGF A G + ++ LL+ L + + D ++ V + M N+ S+N +
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 193 LNGLCKAGKLNKASDI---MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
L GLC + +A ++ M D + G P VV+Y +I+G+ K+G K Y + + +
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY---STYHE 221
Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
M++ GILP+ VT+N++I CK + + AM+V M +G+ +TYNS+++G C G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
EA+ +M + G++P+VVT + L++ CK +AR +FD ++++GL P + TY T
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
L+ Y +G + + + + M+ G+ PD ++ LI +++G V+ + +++ G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
+ VTY ++G LCK G+ + A+ ++M E P + YN LI G C K E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI---DEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 490 DANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
A L+ E+L++G+ N + + + ++G + + E
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 231/476 (48%), Gaps = 23/476 (4%)
Query: 69 LLHSLVVAKKYPKIRSFLHMFVKNGKFTSVST---IFHALSTC--------------SDS 111
++ +L A+ K L+ VKNG T I H + SD
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 112 LCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVE 171
+ + + +LM KN + + F GLK + + LL+ +G ++
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 172 YVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGY 231
+ M R I + F+ ++ K GK+++A + M+ G++P VTY +I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 232 CKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
CK G ++ A F+ M++ G+ P + +N+LI G C A ++ EM GI
Sbjct: 417 CKSG---RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 292 AGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVL 351
+ +NS+I+ C +G++ E+ L + M+ G+KPNV+T N LING+C +++A L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
+ GL P+ +TY+TLI+ YCK RMEDA + M GV PD+ TYN ++ GL +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
+ + + +G + L TYNI++ LCK+ + A+ + + M+ + +
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR- 652
Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
T+N++I + G+ ++A L GL+PN TY+++ E ++ +G + +++
Sbjct: 653 --TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 187/374 (50%), Gaps = 8/374 (2%)
Query: 89 FVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLK 148
+ K GK +F + L N++ ++ K+ + F++ D GL
Sbjct: 381 YAKQGKVDQAMLVFSKMR--QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 149 SSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDI 208
+ N L+ L K+E E + EM R I LN FN +++ CK G++ ++ +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 209 MEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDG 268
E M +GV P V+TYN LI+GYC G KM +A + MV G+ PN VT++TLI+G
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAG---KMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 269 FCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPN 328
+CK + A+ +F+EM S G++ ++TYN ++ GL + A L + SG +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 329 VVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
+ T N +++G CK KL + A +F ++ L T+N +IDA K GR ++A +
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDG 448
+ G++P+ TY + + +G +E + + + +NG N +V L + G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 449 KSKKA---VSLLDE 459
+ +A +S++DE
Sbjct: 736 EITRAGTYLSMIDE 749
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 45/366 (12%)
Query: 168 EDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNIL 227
ED +V+ E+ RR ++ N L +D+ D + VS YN
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRAL------------ADVARDSPAAAVS----RYN-- 73
Query: 228 IDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGS 287
+M +A A + + P+ T+ LI C+ + +
Sbjct: 74 -----------RMARAGA-------DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK 115
Query: 288 HGIAAGVVTYNSLINGLCVDGKLDEA--VALRDEMMASGLKPNVVTSNALINGFCKKKLV 345
G + + L+ GLC D + +A + LR M G PNV + N L+ G C +
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 346 EKARVLFDDISEQ---GLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTY 402
++A L +++ G P V++Y T+I+ + KEG + A++ + MLDRG+LPDV TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234
Query: 403 NCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFK 462
N +IA L + ++ ++N +V NG+ +TYN ++ C G+ K+A+ L K
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK---K 291
Query: 463 MEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGF 522
M + P++VTY++L+ C+ G+ +A + + + ++GL P TTY + + KG
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 523 IPDIEG 528
+ ++ G
Sbjct: 352 LVEMHG 357
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 204/433 (47%), Gaps = 40/433 (9%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEY-V 173
+S +L+ AY K E+F R ++ + V + N +LR +++E F + + V
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 174 YKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCK 233
Y EM + NL +F +++GL K G+ + A + +DM G+SP VTY ILI G C+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 234 KGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAG 293
+G A +F +M +G P+ V N L+DGFCK + A ++ G G
Sbjct: 246 RGSADD---ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 294 VVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFD 353
+ Y+SLI+GL + +A L M+ +KP+++ LI G K +E A L
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 354 DISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREG 413
+ +G+SP YN +I A C G +E+ +++ M + PD T+ LI + R G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 414 NVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEM------------- 460
V I E+ +G + T+N L+ LCK G+ K+A LL +M
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 461 ------FKMEKEK-----------------KWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
F E P+IV+YNVLI GFC+ G ++ A LLN
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 498 LLEKGLIPNQTTY 510
L KGL P+ TY
Sbjct: 543 LQLKGLSPDSVTY 555
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 7/340 (2%)
Query: 184 LNLDSFNF--VLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMY 241
+++DS+ F +++ K G KA + MK P V TYN+++ ++ +
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML- 181
Query: 242 KADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLI 301
A AV+ +M++ PN TF L+DG K S A K+F++M GI+ VTY LI
Sbjct: 182 -AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 302 NGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLS 361
+GLC G D+A L EM SG P+ V NAL++GFCK + +A L + G
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 362 PSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNI 421
+ Y++LID + R AF + +ML + + PD+ Y LI GLS+ G +E +
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360
Query: 422 MNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKG 481
++ + + G+ YN ++ ALC G ++ SL EM + E +P+ T+ +LI
Sbjct: 361 LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE---SFPDACTHTILICS 417
Query: 482 FCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
C+ G + +A + E+ + G P+ T+ + + + + G
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 7/340 (2%)
Query: 189 FNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFK 248
F V++ L + + +E++KS GVS + +LI Y K +G KA F
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAK---MGMAEKAVESFG 151
Query: 249 DMVENGILPNEVTFNTLIDGFCKDE-NISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVD 307
M E P+ T+N ++ ++E A V+ EM + + T+ L++GL
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 308 GKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITY 367
G+ +A + D+M G+ PN VT LI+G C++ + AR LF ++ G P + +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVN 427
N L+D +CK GRM +AF + G + + Y+ LI GL R + ++
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 428 NGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGK 487
++ ++ Y IL+ L K GK + A+ LL M + P+ YN +IK C +G
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSM---PSKGISPDTYCYNAVIKALCGRGL 388
Query: 488 LEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIE 527
LE+ L E+ E P+ T+ I+ M G + + E
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 50/390 (12%)
Query: 155 NQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKS 214
+ L+ L + ++ +Y M ++ I+ ++ + ++ GL KAGK+ A ++ M S
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 215 LGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDEN 274
G+SP YN +I C G G + + ++ +M E P+ T LI C++
Sbjct: 367 KGISPDTYCYNAVIKALC---GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 275 ISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVV---- 330
+ A ++F E+ G + V T+N+LI+GLC G+L EA L +M +P +
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPASLFLRL 481
Query: 331 --TSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRN 388
+ N + + + KA ++ G SP +++YN LI+ +C+ G ++ A + N
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 389 SMLDRGVLPDVSTYNCLIAGLSREGNVEGV-----------------RNIMNELVNNGMR 431
+ +G+ PD TYN LI GL R G E R++M R
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRK--R 599
Query: 432 AGLVTYNILVGAL----C-------------KDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
LV +N+ + L C K+G++++A L + +++ K +
Sbjct: 600 KVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERA---LRRLIELDTRKDELTLGP 656
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLI 504
Y + + G CQ G+ +A + + L EK ++
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 37/185 (20%)
Query: 352 FDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSR 411
+++ G+S + LI AY K G E A M + PDV TYN ++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL----- 169
Query: 412 EGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPN 471
R +M E V YN ++ C PN
Sbjct: 170 -------RVMMREEVF--FMLAFAVYNEMLKCNCS-----------------------PN 197
Query: 472 IVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMY 531
+ T+ +L+ G +KG+ DA + +++ +G+ PN+ TY I+ + ++G D Y
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257
Query: 532 NISGT 536
+ +
Sbjct: 258 EMQTS 262
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 402 YNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMF 461
+ +I LS + + + EL + G+ + +L+ A K G ++KAV +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV---ESFG 151
Query: 462 KMEKEKKWPNIVTYNVLIKGFCQKGKL-EDANGLLNELLEKGLIPNQTTYQIVREEMMEK 520
+M++ P++ TYNV+++ ++ A + NE+L+ PN T+ I+ + + +K
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 521 GFIPDIEGHMYNISG 535
G D + +++G
Sbjct: 212 GRTSDAQKMFDDMTG 226
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 224 YNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVF 282
Y I + G C+ G + ++A VF + E IL + LI G CK E + AA++VF
Sbjct: 657 YTIWLIGLCQSG---RFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 33/203 (16%)
Query: 143 GDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKL 202
D G ++S N L+ + G + + ++ + + + ++N ++NGL + G+
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 203 NKASDIMEDMKSLGVSPKVVTYNILIDGYCKK-------------------------GGI 237
+A + SP V Y L+ C+K I
Sbjct: 569 EEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI 626
Query: 238 GKMYK---ADAVFKDMVENGILPNEVT---FNTLIDGFCKDENISAAMKVFEEMGSHGIA 291
+ +K + + ++E +E+T + + G C+ A+ VF + I
Sbjct: 627 EQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Query: 292 AGVVTYNSLINGLCVDGKLDEAV 314
+ LI+GLC +LD A+
Sbjct: 687 VTPPSCVKLIHGLCKREQLDAAI 709
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 203/371 (54%), Gaps = 9/371 (2%)
Query: 132 PHL--GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSF 189
P L F++A D G S + N L+ LV+ E Y++M +N S
Sbjct: 52 PQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSL 110
Query: 190 NFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKD 249
+ +L + K A ++ M G + V +NIL+ G C+ GK A ++ ++
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLRE 167
Query: 250 MVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGK 309
M N ++P+ ++NT+I GFC+ + + A+++ EM G + +VT+ LI+ C GK
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 310 LDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNT 369
+DEA+ EM GL+ ++V +LI GFC +++ + LFD++ E+G SP ITYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 370 LIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNG 429
LI +CK G++++A + M++RGV P+V TY LI GL G + ++N ++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 430 MRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLE 489
VTYNI++ LCKDG AV +++ M+K + P+ +TYN+L+ G C KG L+
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE---LMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 490 DANGLLNELLE 500
+A+ LL +L+
Sbjct: 405 EASKLLYLMLK 415
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 6/401 (1%)
Query: 122 LMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRR 181
LM V++ L F +++ + + +S + LL V+ K V M +R
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 182 IELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGK-M 240
N+ + N +L GLC+ + KA ++ +M+ + P V +YN +I G+C+ GK +
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE----GKEL 193
Query: 241 YKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSL 300
KA + +M +G + VT+ LID FCK + AM +EM G+ A +V Y SL
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 301 INGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGL 360
I G C G+LD AL DE++ G P +T N LI GFCK +++A +F+ + E+G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 361 SPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRN 420
P+V TY LID C G+ ++A + N M+++ P+ TYN +I L ++G V
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 421 IMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
I+ + R +TYNIL+G LC G +A LL M K + P++++YN LI
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK-DSSYTDPDVISYNALIH 432
Query: 481 GFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKG 521
G C++ +L A + + L+EK ++ T I+ ++ G
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 209/441 (47%), Gaps = 37/441 (8%)
Query: 115 NSIIIDMLMLAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVY 174
N + + L+ YV+ K F G +V + N LL+ L + + +
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 175 KEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKK 234
+EM+R + ++ S+N V+ G C+ +L KA ++ +MK G S +VT+ ILID +CK
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 235 GGI--------------------------------GKMYKADAVFKDMVENGILPNEVTF 262
G + G++ + A+F +++E G P +T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 263 NTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMA 322
NTLI GFCK + A ++FE M G+ V TY LI+GLC GK EA+ L + M+
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 323 SGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMED 382
+PN VT N +IN CK LV A + + + ++ P ITYN L+ C +G +++
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 383 AFAMRNSMLDRGVL--PDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNIL 440
A + ML PDV +YN LI GL +E + +I + LV VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 441 VGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLE 500
+ + K G KA+ L + + K N TY +I GFC+ G L A GLL ++
Sbjct: 466 LNSTLKAGDVNKAMELWKQ---ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 501 KGLIPNQTTYQIVREEMMEKG 521
L P+ Y + + ++G
Sbjct: 523 SELQPSVFDYNCLLSSLCKEG 543
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 210/440 (47%), Gaps = 18/440 (4%)
Query: 84 SFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGFEAFKRAG 143
S + F G+ +F + DS C +I + L+ + K + E F+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPC--AITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
+ G++ +V + L+ L GK ++ + M + E N ++N ++N LCK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYK------ADAVFKDMVENGILP 257
A +I+E MK P +TYNIL+ G C KG + + K D+ + D P
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD-------P 422
Query: 258 NEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALR 317
+ +++N LI G CK+ + A+ +++ + A VT N L+N G +++A+ L
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 318 DEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKE 377
++ S + N T A+I+GFCK ++ A+ L + L PSV YN L+ + CKE
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 378 GRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTY 437
G ++ A+ + M PDV ++N +I G + G+++ +++ + G+ L TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 438 NILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNE 497
+ L+ K G +A+S D+M E P+ + ++K +G+ + L+ +
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFE---PDAHICDSVLKYCISQGETDKLTELVKK 659
Query: 498 LLEKGLIPNQTTYQIVREEM 517
L++K ++ ++ V + M
Sbjct: 660 LVDKDIVLDKELTCTVMDYM 679
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 368 NTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI---AGLSREGNVEGVRNIMNE 424
N L+ + E AF+ ML+ + + + L+ + + G GV +M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM-- 133
Query: 425 LVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQ 484
+ G + +NIL+ LC++ + KAVSLL EM + P++ +YN +I+GFC+
Sbjct: 134 -LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM---RRNSLMPDVFSYNTVIRGFCE 189
Query: 485 KGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHM 530
+LE A L NE+ G + T+ I+ + + G + + G +
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 235/508 (46%), Gaps = 17/508 (3%)
Query: 18 NHHWS----KLKNTDPNTVILQLFNSDADPVLILRYFCWSTKELRASHSLLLTGRLLHSL 73
N WS +L TDPN +I L P + R+F W ++ S +L
Sbjct: 70 NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLE-- 127
Query: 74 VVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPH 133
++A+ + S ++ + + I L S ++D+L+ Y K
Sbjct: 128 ILAEN--DLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAE 185
Query: 134 LGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
+F++ G SV +CN +L+ L VY+ M I + +FN +L
Sbjct: 186 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 245
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
+ KAG L + I +MK + VTYNILI+G+ K G KM +A DM +
Sbjct: 246 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG---KMEEARRFHGDMRRS 302
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
G +FN LI+G+CK A V +EM + GI TYN I LC G++D+A
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDA 373
E+++S P+VV+ N L++G+ K +A +LFDD+ + PS++TYNTLID
Sbjct: 363 ----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 374 YCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAG 433
C+ G +E A ++ M + + PDV TY L+ G + GN+ + +E++ G++
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 434 LVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANG 493
Y + G S KA L +EM + P++ YNV I G C+ G L A
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 494 LLNELLEKGLIPNQTTYQIVREEMMEKG 521
++ GL+P+ TY V +E G
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 208/418 (49%), Gaps = 46/418 (11%)
Query: 144 DYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLN 203
++G+ +V++ N +L + K G E V+ ++ EMKRR IE + ++N ++NG K GK+
Sbjct: 231 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 290
Query: 204 KASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFN 263
+A DM+ G + ++N LI+GYCK+G + V +M+ GI P T+N
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW---GVTDEMLNAGIYPTTSTYN 347
Query: 264 TLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMAS 323
I C I A ++ M A VV+YN+L++G GK EA L D++ A
Sbjct: 348 IYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 324 GLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDA 383
+ P++VT N LI+G C+ +E A+ L ++++ Q + P VITY TL+ + K G + A
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 384 FAMRNSMLDRGV------------------------------------LPDVSTYNCLIA 407
+ + ML +G+ PD++ YN I
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 408 GLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEK 467
GL + GN+ ++ G+ VTY ++ ++G+ K A +L DEM + ++
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR---KR 580
Query: 468 KWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPD 525
+P+++TY VLI G + G+LE A E+ ++G+ PN T+ + M + G I +
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 195/381 (51%), Gaps = 14/381 (3%)
Query: 137 EAFKRAGDY---GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVL 193
EA + GD G + S N L+ K+G F+D V EM I ++N +
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Query: 194 NGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
LC G+++ A +++ M +P VV+YN L+ GY K +GK +A +F D+
Sbjct: 351 CALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIK---MGKFVEASLLFDDLRAG 403
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
I P+ VT+NTLIDG C+ N+ A ++ EEM + I V+TY +L+ G +G L A
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLID 372
+ DEM+ G+KP+ G + +KA L ++ ++ +P + YN ID
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
CK G + A + + G++PD TY +I G G + RN+ +E++ +
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
++TY +L+ K G+ ++A EM +K PN++T+N L+ G C+ G +++A
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEM---KKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 493 GLLNELLEKGLIPNQTTYQIV 513
L ++ E+G+ PN+ +Y ++
Sbjct: 641 RYLCKMEEEGIPPNKYSYTML 661
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 173/331 (52%), Gaps = 7/331 (2%)
Query: 151 VLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKASDIME 210
V+S N L+ +K GKF + ++ +++ I ++ ++N +++GLC++G L A + E
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 211 DMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNTLIDGFC 270
+M + + P V+TY L+ G+ K G + A V+ +M+ GI P+ + T G
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSM---ATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 271 KDENISAAMKVFEEM-GSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNV 329
+ + A ++ EEM + A + YN I+GLC G L +A+ + ++ GL P+
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 330 VTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNS 389
VT +I G+ + + AR L+D++ + L PSVITY LI + K GR+E AF
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 390 MLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGK 449
M RGV P+V T+N L+ G+ + GN++ + ++ G+ +Y +L+ C K
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 450 SKKAVSLLDEMFKMEKEKKWPNIVTYNVLIK 480
++ V L EM E E P+ T+ L K
Sbjct: 671 WEEVVKLYKEMLDKEIE---PDGYTHRALFK 698
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 25/302 (8%)
Query: 247 FKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCV 306
F+ M+ G LP+ N ++ ++ A V+E M HGI V+T+N++++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 307 DGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVIT 366
G L+ + EM ++ + VT N LINGF K +E+AR D+ G + + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 367 YNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELV 426
+N LI+ YCK+G +DA+ + + ML+ G+ P STYN I L G ++ R EL+
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELL 366
Query: 427 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKG 486
++ +V+YN L+ K GK +A L D++ + P+IVTYN LI G C+ G
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH---PSIVTYNTLIDGLCESG 423
Query: 487 KLEDANGLLNELLEKGLIPNQTTYQI----------------VREEMMEKGFIPDIEGHM 530
LE A L E+ + + P+ TY V +EM+ KG PD G+
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD--GYA 481
Query: 531 YN 532
Y
Sbjct: 482 YT 483
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 18/353 (5%)
Query: 67 GRLLHSLVVAKKYPKIRSFLHMFVKNGKFTSVSTIFHALST--CSDSLCRNSIIIDMLM- 123
R L S + A + +H ++K GKF S +F L S+ + +ID L
Sbjct: 362 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421
Query: 124 ---LAYVKNMKPHLGFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR 180
L + +K + + + V++ L++ VK G VY EM R+
Sbjct: 422 SGNLEGAQRLKEEMTTQL--------IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 181 RIELNLDSFNFVLNGLCKAGKLNKASDIMEDMKSLGV-SPKVVTYNILIDGYCKKGGIGK 239
I+ + ++ G + G +KA + E+M + +P + YN+ IDG CK +G
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK---VGN 530
Query: 240 MYKADAVFKDMVENGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNS 299
+ KA + + G++P+ VT+ T+I G+ ++ A +++EM + V+TY
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 300 LINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG 359
LI G G+L++A EM G++PNV+T NAL+ G CK +++A + E+G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 360 LSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSRE 412
+ P+ +Y LI C + E+ + MLD+ + PD T+ L L ++
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 203/376 (53%), Gaps = 13/376 (3%)
Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGL 196
E F R ++G SV N +L L+ E + + + VY++MKR E N+ ++N +L L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 197 CKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGIL 256
CK K++ A ++ +M + G P V+Y +I C+ G + + + F+ +V
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS---- 247
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
+N LI+G CK+ + A ++ EM GI+ V++Y++LIN LC G+++ A +
Sbjct: 248 ----VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD-ISEQGLSPSVITYNTLIDAYC 375
+M+ G PN+ T ++L+ G + A L++ I GL P+V+ YNTL+ +C
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 376 KEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRAGLV 435
G + A ++ + M + G P++ TY LI G ++ G+++G I N+++ +G +V
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 436 TYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLL 495
Y +V ALC+ K K+A SL++ M KE P++ T+N IKG C G+L+ A +
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIE---IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 496 NELLEKGLI-PNQTTY 510
++ ++ PN TY
Sbjct: 481 RQMEQQHRCPPNIVTY 496
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 194/379 (51%), Gaps = 13/379 (3%)
Query: 134 LGFEAFKRAGDYGL-KSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFV 192
L FK + L K + L+ ++R L +G+ + V+Y+ ++MK + + D F V
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 193 LNGLCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVE 252
++ + G +A ++ +K G P V YN ++D + I +Y V++DM
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY---MVYRDMKR 174
Query: 253 NGILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDE 312
+G PN T+N L+ CK+ + A K+ EM + G V+Y ++I+ +C G + E
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 313 AVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLID 372
L A +P V NALING CK+ + A L ++ E+G+SP+VI+Y+TLI+
Sbjct: 235 GREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNN-GMR 431
C G++E AF+ ML RG P++ T + L+ G G ++ N+++ G++
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 432 AGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDA 491
+V YN LV C G KAVS+ ME+ PNI TY LI GF ++G L+ A
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSH---MEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 492 NGLLNELLEKGLIPNQTTY 510
+ N++L G PN Y
Sbjct: 407 VYIWNKMLTSGCCPNVVVY 425
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 193/381 (50%), Gaps = 6/381 (1%)
Query: 135 GFEAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLN 194
FE + + G+ +V+S + L+ L G+ E +M +R N+ + + ++
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 195 GLCKAGKLNKASDIMEDM-KSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVEN 253
G G A D+ M + G+ P VV YN L+ G+C G I KA +VF M E
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI---VKAVSVFSHMEEI 381
Query: 254 GILPNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
G PN T+ +LI+GF K ++ A+ ++ +M + G VV Y +++ LC K EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 314 VALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDISEQG-LSPSVITYNTLID 372
+L + M P+V T NA I G C ++ A +F + +Q P+++TYN L+D
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 373 AYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGNVEGVRNIMNELVNNGMRA 432
K R+E+A+ + + RGV STYN L+ G G ++ +++ +G
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 433 GLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVTYNVLIKGFCQKGKLEDAN 492
+T N+++ A CK GK+++A +LD + + K P++++Y +I G C+ ED
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620
Query: 493 GLLNELLEKGLIPNQTTYQIV 513
LL ++ G++P+ T+ ++
Sbjct: 621 ILLERMISAGIVPSIATWSVL 641
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 138 AFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLC 197
F + G ++ + L+ K G + Y++ +M N+ + ++ LC
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 198 KAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDM-VENGIL 256
+ K +A ++E M +P V T+N I G C G ++ A+ VF+ M ++
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG---RLDWAEKVFRQMEQQHRCP 490
Query: 257 PNEVTFNTLIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVAL 316
PN VT+N L+DG K I A + E+ G+ TYN+L++G C G A+ L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 317 RDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDDIS--EQGLSPSVITYNTLIDAY 374
+MM G P+ +T N +I +CK+ E+A + D +S + P VI+Y +I
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 375 CKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLI 406
C+ ED + M+ G++P ++T++ LI
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 295 VTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKARVLFDD 354
+T+ +I L +DG++D L +M G + ++I+ + + L E+A +F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 355 ISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAGLSREGN 414
I E G PSV YN ++D E R++ + + M G P+V TYN L+ L +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 415 VEGVRNIMNELVNNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKMEKEKKWPNIVT 474
V+G + ++ E+ N G V+Y ++ ++C+ G K+ L E+ P +
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL--------AERFEPVVSV 248
Query: 475 YNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFI 523
YN LI G C++ + A L+ E++EKG+ PN +Y + + G I
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 146 GLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRRRIELNLDSFNFVLNGLCKAGKLNKA 205
G +V+ ++ AL + KF++ E + + M + ++ +FN + GLC AG+L+ A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 206 SDIMEDMKSLG-VSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGILPNEVTFNT 264
+ M+ P +VTYN L+DG K I + Y + +++ G+ + T+NT
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY---GLTREIFMRGVEWSSSTYNT 533
Query: 265 LIDGFCKDENISAAMKVFEEMGSHGIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASG 324
L+ G C A+++ +M G + +T N +I C GK + A + D +++ G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCG 592
Query: 325 ---LKPNVVTSNALINGFCKKKLVEKARVLFDDISEQGLSPSVITYNTLIDAYCKEG--R 379
+P+V++ +I G C+ E +L + + G+ PS+ T++ LI+ + + R
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVR 652
Query: 380 MEDAFAM 386
D F +
Sbjct: 653 AHDQFTI 659
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 80 PKIRSF---LHMFVKNGKFTSVSTIFHALSTCSDSLCRNSIIIDMLMLAYVKNMKPHLGF 136
P IR++ ++ F K G I++ + T C N ++ ++ A ++ K
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 137 EAFKRAGDYGLKSSVLSCNQLLRALVKEGKFEDVEYVYKEMKRR-RIELNLDSFNFVLNG 195
+ SV + N ++ L G+ + E V+++M+++ R N+ ++N +L+G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 196 LCKAGKLNKASDIMEDMKSLGVSPKVVTYNILIDGYCKKGGIGKMYKADAVFKDMVENGI 255
L KA ++ +A + ++ GV TYN L+ G C G G A + M+ +G
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI---ALQLVGKMMVDGK 559
Query: 256 LPNEVTFNTLIDGFCKDENISAAMKVFE--EMGSHGIAAGVVTYNSLINGLCVDGKLDEA 313
P+E+T N +I +CK A ++ + G V++Y ++I GLC ++
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 314 VALRDEMMASGLKPNVVTSNALINGF 339
V L + M+++G+ P++ T + LIN F
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,292,877
Number of Sequences: 539616
Number of extensions: 8281535
Number of successful extensions: 34587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 21151
Number of HSP's gapped (non-prelim): 3112
length of query: 537
length of database: 191,569,459
effective HSP length: 122
effective length of query: 415
effective length of database: 125,736,307
effective search space: 52180567405
effective search space used: 52180567405
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)