BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047650
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 1 CLDELLKIVECKNRKNQN-FPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWR 59
CL+EL+KI+ECK R Q P F DV+P+ VR Q +F +AF +HE +KD+++ +Q WR
Sbjct: 83 CLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWR 142
Query: 60 QALKVVANISG 70
AL AN+ G
Sbjct: 143 IALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 1 CLDELLKIVECKNRKN-QNFPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWR 59
CLDEL++I++CK + + P F V+P+ +RKQT FG +F E ++ NWR
Sbjct: 81 CLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFL--ETCCGKTEERQHNWR 138
Query: 60 QALKVVANISG 70
+AL ANI G
Sbjct: 139 RALTDAANILG 149
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 1 CLDELLKIVECKNRKNQN-FPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWR 59
CL+EL++I +C NQ P F V+ + V+KQT FG+ F + + ++ K Q+W+
Sbjct: 81 CLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEETCKAKSEDEK--QSWK 138
Query: 60 QALKVVANISGWELR 74
QAL VA ++G++LR
Sbjct: 139 QALAAVAVMAGYDLR 153
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 CLDELLKIVECKNRKNQN-FPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWR 59
CLDEL +I +C N+ N P F + P+ V + FG+ F +E +K++ ++ Q W+
Sbjct: 83 CLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGDTFRVLKEKYKNDPERTQKWQ 142
Query: 60 QALKVVANISGWEL 73
+AL+ + + G L
Sbjct: 143 EALESIPKLKGLRL 156
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 1 CLDELLKIVECKNRKNQN----FPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQ 56
CL+EL KI K RK+Q P F V+P+ V+ FG+ F E + + Q
Sbjct: 84 CLNELAKI---KERKDQGRLIVIPIFYKVKPSAVKFLEGKFGDNFRALERNNRHMLPITQ 140
Query: 57 NWRQALKVVANISGWEL 73
W++AL+ + G L
Sbjct: 141 KWKEALESIPGSIGMPL 157
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 1 CLDELLKIVECKNRKNQN----FPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQ 56
C+DEL+KI K +QN P F ++ +V+ T FG+ F + ++ KK+
Sbjct: 91 CMDELVKI---KEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLH 147
Query: 57 NWRQALKVVANI 68
W +AL V +
Sbjct: 148 KWTEALFSVCEL 159
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 1 CLDELLKIVE-CKNRKNQNFPTFNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWR 59
CLDEL+K+ E + K P F + T ++ FG+ E ++ +++Q W+
Sbjct: 427 CLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEWEYRSEPERIQKWK 486
Query: 60 QAL-KVVANI 68
+AL V +NI
Sbjct: 487 EALSSVFSNI 496
>sp|B2UL92|SYP_AKKM8 Proline--tRNA ligase OS=Akkermansia muciniphila (strain ATCC
BAA-835) GN=proS PE=3 SV=1
Length = 506
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 15 KNQNFPTFNDVEPTIVRKQT-TTFGEAFAKHEEFFKDNIKKVQNWRQALKVVANISGWEL 73
K + PT EP ++R + T G AFA+ ++D KV W N+ WE+
Sbjct: 110 KTRMIPTGELTEPFVIRPTSETVIGAAFARWTSSYRDLPLKVNQW-------CNVMRWEM 162
Query: 74 R 74
R
Sbjct: 163 R 163
>sp|P38678|GS1_NEUCR Glucan synthesis regulatory protein OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=gs-1 PE=2 SV=1
Length = 532
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Query: 17 QNFPTFND---VEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNWRQAL 62
+N+ T N ++P +V++Q+ +AFA KD + QNWRQ L
Sbjct: 211 ENWKTVNQEFMLDPVLVKRQS----QAFAAQASSSKDAPNRNQNWRQEL 255
>sp|Q2ILX2|SYP2_ANADE Proline--tRNA ligase 2 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=proS2 PE=3 SV=1
Length = 510
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 26 EPTIVRKQT-TTFGEAFAKHEEFFKDNIKKVQNWRQALKVVANISGWELR 74
EP IVR + T GE+FA+ + ++D + W AN+ WE+R
Sbjct: 118 EPLIVRPTSETIIGESFARWVQSYRDLPLLINQW-------ANVVRWEMR 160
>sp|Q2W136|SYP_MAGSA Proline--tRNA ligase OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=proS PE=3 SV=2
Length = 500
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 26 EPTIVRKQT-TTFGEAFAKHEEFFKDNIKKVQNWRQALKVVANISGWELR 74
EP +VR + T G+AFA+ + ++D V W AN+ WE+R
Sbjct: 117 EPLVVRPTSETIIGDAFARWIQSYRDLPMLVNQW-------ANVVRWEMR 159
>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 19 FPT-FNDVEPTIVRKQTTTFGEAFAKHEEFFKDNIKKVQNW 58
+PT ND + ++ K +FG HEE F +KV+NW
Sbjct: 330 YPTSLNDEQKELLHKLQESFGVESKPHEEKFSSIFEKVKNW 370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,951,926
Number of Sequences: 539616
Number of extensions: 915720
Number of successful extensions: 2259
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2251
Number of HSP's gapped (non-prelim): 12
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)