Query 047652
Match_columns 104
No_of_seqs 134 out of 878
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 13:17:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047652.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047652hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04660 nsLTP_like nsLTP_like: 99.8 7E-20 1.5E-24 112.2 7.2 73 19-93 1-73 (73)
2 cd01960 nsLTP1 nsLTP1: Non-spe 99.6 3.5E-16 7.6E-21 98.7 4.2 74 18-94 2-89 (89)
3 PF14368 LTP_2: Probable lipid 99.6 2.7E-16 5.8E-21 99.5 2.0 73 16-93 19-96 (96)
4 cd01959 nsLTP2 nsLTP2: Non-spe 99.6 2.1E-15 4.5E-20 90.9 4.8 61 23-88 3-64 (66)
5 cd00010 AAI_LTSS AAI_LTSS: Alp 99.4 1.7E-13 3.7E-18 81.0 2.7 56 28-85 2-63 (63)
6 smart00499 AAI Plant lipid tra 99.3 4.7E-12 1E-16 76.2 5.9 73 19-93 1-79 (79)
7 PF00234 Tryp_alpha_amyl: Prot 99.1 6.2E-12 1.3E-16 78.8 -2.0 70 20-93 9-90 (90)
8 PF14547 Hydrophob_seed: Hydro 97.4 0.00012 2.7E-09 46.0 2.3 75 19-94 2-85 (85)
9 cd01958 HPS_like HPS_like: Hyd 97.2 0.00089 1.9E-08 42.1 4.5 75 18-93 3-85 (85)
10 cd00261 AAI_SS AAI_SS: Alpha-A 84.6 0.55 1.2E-05 30.0 1.3 62 25-87 14-104 (110)
11 PF05617 Prolamin_like: Prolam 53.9 7.1 0.00015 22.8 1.0 21 41-61 26-46 (70)
No 1
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.81 E-value=7e-20 Score=112.16 Aligned_cols=73 Identities=40% Similarity=0.873 Sum_probs=64.1
Q ss_pred CcCchHHHHhhcHHHHhhcCCCCCCChhhHHHHHcCCccccccccccccccCCCHHHHHHHHhhcCCCCCCCCCC
Q 047652 19 CGGSIPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGADIPCVCGLVTREVEKIISMEKVVFVARKCGLTIKPGLKC 93 (104)
Q Consensus 19 C~~~~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~~~~ClC~~~~~~~~~~in~~~a~~lp~~Cg~~~p~~~~C 93 (104)
|+.++..| .+|++|++++++..+||++||++||+++++|+|.+++....++||.++|++||++||+++|+ ++|
T Consensus 1 C~~~~~~L-~~C~~yl~~~~~~~~Ps~~CC~~vk~~~~~C~C~~~~~~~~~~i~~~~a~~Lp~~Cgv~~p~-~~C 73 (73)
T cd04660 1 CNMDLDLL-AECQPYVTGPNPPPPPSRECCAALRRADLPCLCRYKTSLVLQIIDPDKAVYLPAKCGLPLPP-SSC 73 (73)
T ss_pred CCCCHHHH-HHHHHHHcCCCCCCCCCHHHHHHHHcCCcCCEeeccCCCcccccCHHHHHHHHHHcCCCCCC-CCC
Confidence 67777778 99999999876434699999999999999999999987655579999999999999999999 887
No 2
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.62 E-value=3.5e-16 Score=98.75 Aligned_cols=74 Identities=28% Similarity=0.632 Sum_probs=61.2
Q ss_pred cCcCchHHHHhhcHHHHhhcCCCCCCChhhHHHHHcC--------Ccccccccccccccc--CCCHHHHHHHHhhcCCCC
Q 047652 18 QCGGSIPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGA--------DIPCVCGLVTREVEK--IISMEKVVFVARKCGLTI 87 (104)
Q Consensus 18 ~C~~~~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~--------~~~ClC~~~~~~~~~--~in~~~a~~lp~~Cg~~~ 87 (104)
+|..+...| .+|++|+++++ ..|+++||++++++ |++|+|.+++..... +||.+++.+||++||+++
T Consensus 2 ~C~~v~~~l-~~C~~y~~g~~--~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~ 78 (89)
T cd01960 2 SCGQVTSLL-APCLGYLTGGG--PAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSI 78 (89)
T ss_pred CHHHHHhhH-HhHHHHHhCCC--CCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCC
Confidence 588888888 99999999864 47999999999986 468999998765433 499999999999999996
Q ss_pred C----CCCCCC
Q 047652 88 K----PGLKCG 94 (104)
Q Consensus 88 p----~~~~C~ 94 (104)
+ +.+||+
T Consensus 79 ~~~i~~~~dC~ 89 (89)
T cd01960 79 PYPISPSTDCS 89 (89)
T ss_pred CCCCCCCCCCC
Confidence 4 456663
No 3
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.60 E-value=2.7e-16 Score=99.49 Aligned_cols=73 Identities=29% Similarity=0.680 Sum_probs=47.1
Q ss_pred cccCcCchHHHHhhcHHHHhhcCCCCCCChhhHHHHHcC---Ccccccccccccc-cc-CCCHHHHHHHHhhcCCCCCCC
Q 047652 16 AAQCGGSIPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGA---DIPCVCGLVTREV-EK-IISMEKVVFVARKCGLTIKPG 90 (104)
Q Consensus 16 ~~~C~~~~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~---~~~ClC~~~~~~~-~~-~in~~~a~~lp~~Cg~~~p~~ 90 (104)
..+|.+++... .+|..|++++ .+||++||+++|++ |+.|||+++++.. .. +||++++.+||++||+++|+
T Consensus 19 ~~~c~~~l~~c-~~~~~~~~~~---~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~~- 93 (96)
T PF14368_consen 19 CCSCANSLLPC-CPCLCYVTGG---PAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVPP- 93 (96)
T ss_dssp TTB-HCCCCHH---HHHHHCC--------HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S--
T ss_pred cchhHHHHhcc-ccchhccCCC---CCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCCC-
Confidence 34675543333 2347787742 57999999999996 8999999999865 33 79999999999999999998
Q ss_pred CCC
Q 047652 91 LKC 93 (104)
Q Consensus 91 ~~C 93 (104)
++|
T Consensus 94 ~~C 96 (96)
T PF14368_consen 94 SKC 96 (96)
T ss_dssp ---
T ss_pred CCC
Confidence 777
No 4
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.59 E-value=2.1e-15 Score=90.92 Aligned_cols=61 Identities=23% Similarity=0.539 Sum_probs=53.2
Q ss_pred hHHHHhhcHHHHhhcCCCCCCChhhHHHHHcCCccccccccccc-cccCCCHHHHHHHHhhcCCCCC
Q 047652 23 IPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGADIPCVCGLVTRE-VEKIISMEKVVFVARKCGLTIK 88 (104)
Q Consensus 23 ~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~~~~ClC~~~~~~-~~~~in~~~a~~lp~~Cg~~~p 88 (104)
..+| .+|.+|++++ .+||++||+.+|+.+ +|||+|+++. +.++||.++|++|+++||+++|
T Consensus 3 ~~~L-~~C~~ai~~~---~~Ps~~CC~~Lk~~~-~CLC~y~~~p~l~~~i~~~~A~~l~~~Cgv~~P 64 (66)
T cd01959 3 PTQL-SPCLPAILGG---SPPSAACCAKLKEQQ-SCLCQYAKNPSLKQYVNSPNARKVLAACGVPYP 64 (66)
T ss_pred hhhc-ccCHHHHhCC---CCCCHHHHHHHhcCC-CCeeeeecCccHHhhcCcHHHHHHHHHcCCCCC
Confidence 3467 8999999975 379999999999976 9999999875 4458999999999999999987
No 5
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.40 E-value=1.7e-13 Score=80.99 Aligned_cols=56 Identities=21% Similarity=0.598 Sum_probs=47.9
Q ss_pred hhcHHHHhhcCCCCCCChhhHHHHHcC---Ccccccccccccccc--CC-CHHHHHHHHhhcCC
Q 047652 28 AQCSQFVKIEGPKVPPSPGCCTAVKGA---DIPCVCGLVTREVEK--II-SMEKVVFVARKCGL 85 (104)
Q Consensus 28 ~~C~~~l~~~~~~~~Ps~~CC~~vk~~---~~~ClC~~~~~~~~~--~i-n~~~a~~lp~~Cg~ 85 (104)
.+|++|+++++ .+||.+||++++++ ++.|+|+++++.... ++ |.+++..||++||+
T Consensus 2 ~~C~~y~~~~~--~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 2 APCLSYLTGGA--TAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred cchHHHHcCCC--CCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 69999999764 47999999999997 689999999876532 44 79999999999996
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.32 E-value=4.7e-12 Score=76.24 Aligned_cols=73 Identities=27% Similarity=0.652 Sum_probs=59.1
Q ss_pred CcCchHHHHhhcHHHHhhcCCCCCCChhhHHHHHcC-CccccccccccccccC-----CCHHHHHHHHhhcCCCCCCCCC
Q 047652 19 CGGSIPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGA-DIPCVCGLVTREVEKI-----ISMEKVVFVARKCGLTIKPGLK 92 (104)
Q Consensus 19 C~~~~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~-~~~ClC~~~~~~~~~~-----in~~~a~~lp~~Cg~~~p~~~~ 92 (104)
|......+ .+|.+|+++..+...|+.+||++++.+ +..|+|..++...... ++..++..||+.||+..+. +.
T Consensus 1 C~~~~~~~-~~c~~~~~~~~~~~~p~~~CC~~l~~~~~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~-~~ 78 (79)
T smart00499 1 CGQVLLQL-APCLSYLTGGSPGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPY-TD 78 (79)
T ss_pred ChhhhhhH-HhhHHHHcCCCCCCCCchHHHHHHHHhcccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCC-CC
Confidence 55666677 699999998642357999999999999 9999999998754432 5999999999999999775 44
Q ss_pred C
Q 047652 93 C 93 (104)
Q Consensus 93 C 93 (104)
|
T Consensus 79 C 79 (79)
T smart00499 79 C 79 (79)
T ss_pred C
Confidence 4
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=99.08 E-value=6.2e-12 Score=78.85 Aligned_cols=70 Identities=19% Similarity=0.436 Sum_probs=56.6
Q ss_pred cCchHHHHhhcHHHHhhcCCCCCCChhhHHHHHcCCcccccccccccccc------------CCCHHHHHHHHhhcCCCC
Q 047652 20 GGSIPQLIAQCSQFVKIEGPKVPPSPGCCTAVKGADIPCVCGLVTREVEK------------IISMEKVVFVARKCGLTI 87 (104)
Q Consensus 20 ~~~~~~l~~~C~~~l~~~~~~~~Ps~~CC~~vk~~~~~ClC~~~~~~~~~------------~in~~~a~~lp~~Cg~~~ 87 (104)
..+...+ .+|..|++++. ..|+..||++|++++..|.|..++..... .++..+|..||+.||+++
T Consensus 9 ~~~~~~l-~~c~~~~~~~~--~~~~~~CC~~L~~l~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~ 85 (90)
T PF00234_consen 9 SPVQVRL-SPCLPYLQGGC--QQPSQQCCQQLRQLDPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSP 85 (90)
T ss_dssp GTTSSHH-HGGHHHHTTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSS
T ss_pred hhccccc-cccHHHHhccc--ccchHHHhHHHHHHhHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCC
Confidence 3333457 89999999853 26899999999999999999999865432 589999999999999998
Q ss_pred CCCCCC
Q 047652 88 KPGLKC 93 (104)
Q Consensus 88 p~~~~C 93 (104)
+. ++|
T Consensus 86 ~~-~~C 90 (90)
T PF00234_consen 86 PY-TDC 90 (90)
T ss_dssp SS-S-G
T ss_pred CC-CCC
Confidence 75 565
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=97.38 E-value=0.00012 Score=46.00 Aligned_cols=75 Identities=23% Similarity=0.595 Sum_probs=52.6
Q ss_pred CcCchHHHHhhcHHHHhhc--CCCCCCChhhHHHHHcC----CccccccccccccccCCC--H-HHHHHHHhhcCCCCCC
Q 047652 19 CGGSIPQLIAQCSQFVKIE--GPKVPPSPGCCTAVKGA----DIPCVCGLVTREVEKIIS--M-EKVVFVARKCGLTIKP 89 (104)
Q Consensus 19 C~~~~~~l~~~C~~~l~~~--~~~~~Ps~~CC~~vk~~----~~~ClC~~~~~~~~~~in--~-~~a~~lp~~Cg~~~p~ 89 (104)
|..+..+| .-|.+.+.-. ....++...||.-++.+ -..|||..++......+| . -....|-..||...|+
T Consensus 2 CP~d~lkL-gvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p~ 80 (85)
T PF14547_consen 2 CPRDALKL-GVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVPS 80 (85)
T ss_pred CCCcchhh-hhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCcC
Confidence 55555667 7888887211 11124778999999998 268999999875432122 2 2566778889999999
Q ss_pred CCCCC
Q 047652 90 GLKCG 94 (104)
Q Consensus 90 ~~~C~ 94 (104)
||+|.
T Consensus 81 gf~C~ 85 (85)
T PF14547_consen 81 GFTCP 85 (85)
T ss_pred CCcCC
Confidence 99994
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=97.18 E-value=0.00089 Score=42.13 Aligned_cols=75 Identities=20% Similarity=0.559 Sum_probs=53.4
Q ss_pred cCcCchHHHHhhcHHHHhhcC--CCCCCChhhHHHHHcC----Ccccccccccccccc-CCC-HHHHHHHHhhcCCCCCC
Q 047652 18 QCGGSIPQLIAQCSQFVKIEG--PKVPPSPGCCTAVKGA----DIPCVCGLVTREVEK-IIS-MEKVVFVARKCGLTIKP 89 (104)
Q Consensus 18 ~C~~~~~~l~~~C~~~l~~~~--~~~~Ps~~CC~~vk~~----~~~ClC~~~~~~~~~-~in-~~~a~~lp~~Cg~~~p~ 89 (104)
.|..+..++ .-|..-+..-+ -..+|..+||.-++.+ -..|+|..++..... .+| +-+..-+-..||...|+
T Consensus 3 ~CP~dalkL-gvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P~ 81 (85)
T cd01958 3 TCPRDALKL-GVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVPP 81 (85)
T ss_pred CCCcchHHh-chhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCCC
Confidence 577766677 78888774311 1135778999999997 268999999875543 233 33455566789999999
Q ss_pred CCCC
Q 047652 90 GLKC 93 (104)
Q Consensus 90 ~~~C 93 (104)
||+|
T Consensus 82 gf~C 85 (85)
T cd01958 82 GFTC 85 (85)
T ss_pred CCcC
Confidence 9998
No 10
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=84.64 E-value=0.55 Score=29.99 Aligned_cols=62 Identities=15% Similarity=0.322 Sum_probs=43.0
Q ss_pred HHHhhcHHHHhhcC-CCC-------C----CChhhHHHHHcCCccccccccccccc---c--------------CCCHHH
Q 047652 25 QLIAQCSQFVKIEG-PKV-------P----PSPGCCTAVKGADIPCVCGLVTREVE---K--------------IISMEK 75 (104)
Q Consensus 25 ~l~~~C~~~l~~~~-~~~-------~----Ps~~CC~~vk~~~~~ClC~~~~~~~~---~--------------~in~~~ 75 (104)
.| .+|..|+.... +.. . ....||..++.++..|-|..+..... . ..-...
T Consensus 14 ~L-~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (110)
T cd00261 14 PL-NSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMRQA 92 (110)
T ss_pred cC-cHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhCcHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHHHH
Confidence 46 88999987431 100 0 12579999999999999999864211 0 123558
Q ss_pred HHHHHhhcCCCC
Q 047652 76 VVFVARKCGLTI 87 (104)
Q Consensus 76 a~~lp~~Cg~~~ 87 (104)
|..||..||+..
T Consensus 93 a~~Lp~~C~~~~ 104 (110)
T cd00261 93 AQNLPSMCNLYP 104 (110)
T ss_pred HHhhchhcCCCC
Confidence 899999999986
No 11
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=53.92 E-value=7.1 Score=22.77 Aligned_cols=21 Identities=24% Similarity=0.537 Sum_probs=18.1
Q ss_pred CCCChhhHHHHHcCCcccccc
Q 047652 41 VPPSPGCCTAVKGADIPCVCG 61 (104)
Q Consensus 41 ~~Ps~~CC~~vk~~~~~ClC~ 61 (104)
...+.+||.++..++..|.=.
T Consensus 26 ~~i~~~CC~~i~~~g~~C~~~ 46 (70)
T PF05617_consen 26 KNIGPECCKAINKMGKDCHPA 46 (70)
T ss_pred CCCChHHHHHHHHHhHhHHHH
Confidence 468889999999998888766
Done!