BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047658
(229 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157678732|dbj|BAF80471.1| PSI reaction center subunit II [Citrus sinensis]
gi|157678950|dbj|BAF80473.1| PSI reaction center subunit II [Citrus sinensis]
Length = 209
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/207 (96%), Positives = 202/207 (97%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP
Sbjct: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
Query: 181 QGVGVNYRSIGKNVSPIEHKTELKKFH 207
QGVGVNYRSIGKNVSPIE K K+ +
Sbjct: 181 QGVGVNYRSIGKNVSPIEVKFTGKQVY 207
>gi|157678962|dbj|BAF80479.1| PSI reaction center subunit II [Citrus sinensis]
Length = 209
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/207 (93%), Positives = 197/207 (95%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQAGLFTPSI TTKTSKL LNPWKPTSSFSFTSPKPLTFSM QRTVRAA AE KTEAP
Sbjct: 1 MATQAGLFTPSITTTKTSKLPLNPWKPTSSFSFTSPKPLTFSMGQRTVRAAGAEGKTEAP 60
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
Query: 181 QGVGVNYRSIGKNVSPIEHKTELKKFH 207
QGVG+NYRSIGKNVSPIE K K+ +
Sbjct: 181 QGVGLNYRSIGKNVSPIEVKFTGKQVY 207
>gi|255559414|ref|XP_002520727.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
gi|223540112|gb|EEF41689.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
Length = 209
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/209 (84%), Positives = 189/209 (90%), Gaps = 4/209 (1%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSP-KPLTFSMAQRTVR-AAAAEEKTE 58
MATQ+GLFTP+ IT L+ PWKPTSSFSFTS KPLTFS QR+++ AAAAEEKTE
Sbjct: 1 MATQSGLFTPTTITAPKPNLI--PWKPTSSFSFTSTTKPLTFSTTQRSLKVAAAAEEKTE 58
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
PTKEAPVGFTPP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGA
Sbjct: 59 TPTKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGA 118
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP
Sbjct: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
Query: 179 GRQGVGVNYRSIGKNVSPIEHKTELKKFH 207
GRQGVG N+RSIGKNVSPIE K K+ +
Sbjct: 179 GRQGVGQNFRSIGKNVSPIEVKFTGKQVY 207
>gi|255551453|ref|XP_002516772.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
gi|223543860|gb|EEF45386.1| Photosystem I reaction center subunit II, chloroplast precursor,
putative [Ricinus communis]
Length = 208
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/208 (78%), Positives = 182/208 (87%), Gaps = 5/208 (2%)
Query: 1 MATQAGLFTPSIITT-KTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA LFTP+ ++T K+S + PWK +S S + KP +S+AQ+T++AAAAE KT
Sbjct: 3 MATQASLFTPTTLSTPKSSNHAIVPWKQSSFLSIPTAKPRKYSIAQKTIKAAAAEGKT-- 60
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
KEAPVGFTPP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAA
Sbjct: 61 --KEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAA 118
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 119 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 178
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
R+GVG N+RSIGKNVSPIE K K+ +
Sbjct: 179 REGVGQNFRSIGKNVSPIEVKFTGKQVY 206
>gi|225432620|ref|XP_002281825.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 1 [Vitis vinifera]
gi|359477510|ref|XP_003631987.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 2 [Vitis vinifera]
gi|359477512|ref|XP_003631988.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 3 [Vitis vinifera]
gi|359477514|ref|XP_003631989.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
isoform 4 [Vitis vinifera]
gi|147800882|emb|CAN62373.1| hypothetical protein VITISV_036477 [Vitis vinifera]
Length = 204
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/200 (82%), Positives = 175/200 (87%), Gaps = 7/200 (3%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQA LFTP++ + + PWK +SS SFT+PK S+A RT A AEE AP
Sbjct: 3 MATQASLFTPTL----SGDRVTVPWKSSSSLSFTTPKLPKSSVAPRTTIRAMAEE---AP 55
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
TKEAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 56 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 115
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 116 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 175
Query: 181 QGVGVNYRSIGKNVSPIEHK 200
QGVGVN+RSIGKNV+PIE K
Sbjct: 176 QGVGVNFRSIGKNVNPIEVK 195
>gi|356575833|ref|XP_003556041.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Glycine max]
Length = 203
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 172/200 (86%), Gaps = 8/200 (4%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQA LFTP + K S PWK +S+ SF++ KPL FS RT+RAAA ++ TEAP
Sbjct: 3 MATQASLFTPPLSGLKPSDRATAPWKQSSTLSFSTSKPLKFS---RTIRAAATDQTTEAP 59
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
VGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 60 -----VGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 114
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 115 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNAGR 174
Query: 181 QGVGVNYRSIGKNVSPIEHK 200
QGVG N+RSIGKNVSPIE K
Sbjct: 175 QGVGQNFRSIGKNVSPIEVK 194
>gi|157678954|dbj|BAF80475.1| PSI reaction center subunit II [Citrus sinensis]
Length = 207
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 171/205 (83%), Gaps = 6/205 (2%)
Query: 3 TQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTK 62
TQA LF P+ +T S PWK +SSFS +PL + + A AE KTE PTK
Sbjct: 7 TQASLFAPANFSTTKSSA---PWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTK 60
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
Query: 183 VGVNYRSIGKNVSPIEHKTELKKFH 207
VG NYRSIGKNVSPIE K K+ +
Sbjct: 181 VGQNYRSIGKNVSPIEVKFTGKQVY 205
>gi|157678730|dbj|BAF80470.1| PSI reaction center subunit II [Citrus sinensis]
gi|157678958|dbj|BAF80477.1| PSI reaction center subunit II [Citrus sinensis]
Length = 207
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 171/205 (83%), Gaps = 6/205 (2%)
Query: 3 TQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTK 62
TQA LF P+ +T S PWK +SSFS +PL + + A AE KTE PTK
Sbjct: 7 TQASLFAPANFSTTKSSA---PWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTK 60
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 61 EAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 120
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 121 EGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 180
Query: 183 VGVNYRSIGKNVSPIEHKTELKKFH 207
VG NYRSIGKNVSPIE K K+ +
Sbjct: 181 VGQNYRSIGKNVSPIEVKFTGKQVY 205
>gi|351727030|ref|NP_001235355.1| photosystem I subunit PsaD [Glycine max]
gi|148372347|gb|ABQ63097.1| photosystem I subunit PsaD [Glycine max]
gi|255627695|gb|ACU14192.1| unknown [Glycine max]
Length = 210
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 167/202 (82%), Positives = 175/202 (86%), Gaps = 5/202 (2%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQA L TP + K S PWK SS SF+SPKPL FS RT+RAAAA+E TEAP
Sbjct: 3 MATQASLLTPPLSGLKASDRASVPWKQNSSLSFSSPKPLKFS---RTIRAAAADETTEAP 59
Query: 61 TK--EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
K APVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGA
Sbjct: 60 AKVEAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGA 119
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN
Sbjct: 120 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNA 179
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG N+RSIGKNVSPIE K
Sbjct: 180 GRQGVGQNFRSIGKNVSPIEVK 201
>gi|357480841|ref|XP_003610706.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|355512041|gb|AES93664.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|388519753|gb|AFK47938.1| unknown [Medicago truncatula]
Length = 209
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 174/207 (84%), Gaps = 16/207 (7%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQA LFTP + + K PWK S+ SF S KP+ F+ +T + +AA+EKTEA
Sbjct: 3 MATQASLFTPPLSSPK-------PWKQPSTLSFISLKPIKFTT--KTTKISAADEKTEAA 53
Query: 61 ---TKE----APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM 113
TKE APVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM
Sbjct: 54 SVTTKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM 113
Query: 114 PTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP 173
PTGGAAIMR+GPNLLKLARKEQCLALG RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP
Sbjct: 114 PTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP 173
Query: 174 EKVNPGRQGVGVNYRSIGKNVSPIEHK 200
EKVNPGRQGVG N+RSIGKNVSPIE K
Sbjct: 174 EKVNPGRQGVGQNFRSIGKNVSPIEVK 200
>gi|388510876|gb|AFK43504.1| unknown [Lotus japonicus]
Length = 210
Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/204 (80%), Positives = 176/204 (86%), Gaps = 9/204 (4%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAA-AAEEKTEA 59
MATQA LF+P + S + PWK + + SFT+ KPL F+ + RT AA+EKTEA
Sbjct: 3 MATQASLFSPPL-----SGRVSAPWKQSPTLSFTNTKPLKFTTSPRTTTTIRAADEKTEA 57
Query: 60 P--TKEA-PVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 116
P TKEA PVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG
Sbjct: 58 PVATKEAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 117
Query: 117 GAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 176
GAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV
Sbjct: 118 GAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 177
Query: 177 NPGRQGVGVNYRSIGKNVSPIEHK 200
NPGRQGVG N+RSIGKNVSPIE K
Sbjct: 178 NPGRQGVGQNFRSIGKNVSPIEVK 201
>gi|224099787|ref|XP_002311618.1| hypothetical protein POPTRDRAFT_564827 [Populus trichocarpa]
gi|222851438|gb|EEE88985.1| hypothetical protein POPTRDRAFT_564827 [Populus trichocarpa]
Length = 204
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 175/208 (84%), Gaps = 9/208 (4%)
Query: 1 MATQAGLFTPSIITT-KTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA LFTP+ ++T K+S + WK +S P++ AQR+ + AA EEKT
Sbjct: 3 MATQASLFTPTTLSTLKSSNQTIVQWKQSSFL------PISNVKAQRSFKVAAVEEKTA- 55
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
TKEAPVGFTPP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAA
Sbjct: 56 -TKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAA 114
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 115 IMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 174
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
RQGVG N+RSIGKN SPIE K K+ +
Sbjct: 175 RQGVGQNFRSIGKNASPIEVKFTGKQVY 202
>gi|225437028|ref|XP_002278284.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
[Vitis vinifera]
gi|296085204|emb|CBI28699.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/201 (84%), Positives = 179/201 (89%), Gaps = 7/201 (3%)
Query: 1 MATQAGLFTPSIITTKTSK-LLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQAGL TP+ ITT S+ L L PWKP+S SF++ KP+ R ++A A EEKTEA
Sbjct: 1 MATQAGLLTPTTITTPKSRSLTLVPWKPSSFSSFSTSKPIN-----RAIKAMA-EEKTEA 54
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
P KEAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA
Sbjct: 55 PVKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 114
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 115 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 174
Query: 180 RQGVGVNYRSIGKNVSPIEHK 200
RQGVG N+RSIGKNVSPIE K
Sbjct: 175 RQGVGQNFRSIGKNVSPIEVK 195
>gi|118489639|gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 201
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 174/208 (83%), Gaps = 10/208 (4%)
Query: 1 MATQAGLFTPSIITT-KTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MA QA LFTP ++T K+S + PWK +S ++ KP QRT++ AAAEE
Sbjct: 1 MAAQASLFTPPTLSTLKSSNQAIAPWKQSSFLPISNVKP------QRTMKVAAAEETA-- 52
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
KEAPVGFTPP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAA
Sbjct: 53 -VKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAA 111
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 112 IMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 171
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
RQGVG N+RSIGKNVSPIE K K+ +
Sbjct: 172 RQGVGQNFRSIGKNVSPIEVKFTGKQVY 199
>gi|407769|dbj|BAA02871.1| PSI-D1 precursor [Nicotiana sylvestris]
Length = 214
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 180/212 (84%), Gaps = 7/212 (3%)
Query: 1 MATQAGLFTPSIITTKTSK-LLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MA+QA LFTPSI T+KT+ ++ PWK ++S SF++PK +A R ++A A E K ++
Sbjct: 3 MASQASLFTPSISTSKTADPRVVAPWKQSAS-SFSAPKLSKSVVAYRPIKAMAVE-KAQS 60
Query: 60 PTKEA----PVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT 115
TKEA PVGFTPPQLDP+TPSPIFGGSTGGLLRKAQV+EFYVITWESPKEQIFEMPT
Sbjct: 61 ATKEAEPAAPVGFTPPQLDPSTPSPIFGGSTGGLLRKAQVDEFYVITWESPKEQIFEMPT 120
Query: 116 GGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 175
GGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEK
Sbjct: 121 GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEK 180
Query: 176 VNPGRQGVGVNYRSIGKNVSPIEHKTELKKFH 207
VNPGRQGVG N+RSIGKN SPIE K K+ +
Sbjct: 181 VNPGRQGVGQNFRSIGKNKSPIEVKFTGKQVY 212
>gi|224111204|ref|XP_002315779.1| hypothetical protein POPTRDRAFT_566261 [Populus trichocarpa]
gi|118487204|gb|ABK95430.1| unknown [Populus trichocarpa]
gi|118487687|gb|ABK95668.1| unknown [Populus trichocarpa]
gi|222864819|gb|EEF01950.1| hypothetical protein POPTRDRAFT_566261 [Populus trichocarpa]
Length = 201
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 169/201 (84%), Gaps = 10/201 (4%)
Query: 1 MATQAGLFTPSIITT-KTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MA QA LFTP ++T K+S PWK S ++ KP QRT++ AAAEE
Sbjct: 1 MAAQASLFTPPTLSTLKSSNQAFVPWKQASFLPISNVKP------QRTMKVAAAEETA-- 52
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
KEAPVGFTPP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAA
Sbjct: 53 -VKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAA 111
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 112 IMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 171
Query: 180 RQGVGVNYRSIGKNVSPIEHK 200
RQGVG N+RSIGKNVSPIE K
Sbjct: 172 RQGVGQNFRSIGKNVSPIEVK 192
>gi|449432708|ref|XP_004134141.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Cucumis sativus]
gi|417544|sp|P32869.1|PSAD_CUCSA RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=PS I subunit 5; AltName:
Full=Photosystem I 20 kDa subunit; Short=PSI-D; Flags:
Precursor
gi|227772|prf||1710320A photosystem I 20kD protein
Length = 207
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/208 (73%), Positives = 175/208 (84%), Gaps = 6/208 (2%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKP-LTFSMAQRTVRAAAAEEKTEA 59
MATQA LFTPS+ T K++ + + PWK +S+ SF + KP L + + R+ + +A E +
Sbjct: 3 MATQATLFTPSLSTPKSTGISI-PWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETS-- 59
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
EAP GF+PP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA
Sbjct: 60 --VEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 117
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 118 IMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 177
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
R+GVG N+RSIGKNVSPIE K K+ +
Sbjct: 178 REGVGQNFRSIGKNVSPIEVKFTGKQVY 205
>gi|15218708|ref|NP_171812.1| photosystem I reaction center subunit II-2 [Arabidopsis thaliana]
gi|38503234|sp|Q9SA56.1|PSAD2_ARATH RecName: Full=Photosystem I reaction center subunit II-2,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit 2; Short=PSI-D2; Flags: Precursor
gi|4587564|gb|AAD25795.1|AC006550_3 Strong similarity to gb|X14017 photosystem I reaction centre
subunit II precursor (psaD) from Spinacia oleracea. ESTs
gb|R30423, gb|T42998, gb|Z18178, gb|T14133, gb|N65521,
gb|T42498, gb|T41918, gb|N38024, gb|R65109, gb|T43849,
gb|AA394388, gb|T20925 and gb|N65696 come from this gene
[Arabidopsis thaliana]
gi|11692912|gb|AAG40059.1|AF324708_1 At1g03130 [Arabidopsis thaliana]
gi|12083234|gb|AAG48776.1|AF332413_1 putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|14517460|gb|AAK62620.1| At1g03130/F10O3_4 [Arabidopsis thaliana]
gi|21555282|gb|AAM63823.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|23507779|gb|AAN38693.1| At1g03130/F10O3_4 [Arabidopsis thaliana]
gi|332189413|gb|AEE27534.1| photosystem I reaction center subunit II-2 [Arabidopsis thaliana]
Length = 204
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/202 (74%), Positives = 166/202 (82%), Gaps = 9/202 (4%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F+P+I TT ++ L+ + +S +P + S + +RA E + A
Sbjct: 1 MATQAAGIFSPAITTTTSAVKKLHLFS-------SSHRPKSLSFTKTAIRAEKTESSSAA 53
Query: 60 P-TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
P KEAPVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGA
Sbjct: 54 PAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGA 113
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NP
Sbjct: 114 AIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANP 173
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GR+GVG+N RSIGKNVSPIE K
Sbjct: 174 GREGVGLNMRSIGKNVSPIEVK 195
>gi|21289|emb|CAA32182.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 153/202 (75%), Positives = 166/202 (82%), Gaps = 3/202 (1%)
Query: 1 MATQAGLFTPSIITTK--TSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTE 58
MATQA LF+PS +++ L +K S+ SF S KP + + R AA + T
Sbjct: 3 MATQATLFSPSSLSSAKPIDTRLTTSFKQPSALSFAS-KPASRHHSIRAAAAAEGKAATP 61
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
TKEAP GFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 62 TETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 121
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNP
Sbjct: 122 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNP 181
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG+N RSIGKNVSPIE K
Sbjct: 182 GRQGVGLNMRSIGKNVSPIEVK 203
>gi|34787117|emb|CAD89270.1| putative photosystem I reaction centre PSI-D subunit precursor
[Solanum tuberosum]
Length = 207
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 169/208 (81%), Gaps = 6/208 (2%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMA-QRTVRAAAAEEKTEA 59
MATQA LFTP++ K++ PWK S SF++PK L +++ R +RA A E
Sbjct: 3 MATQASLFTPALSVPKSTA----PWK-QSLLSFSTPKQLKSTVSVTRPIRAMAEEAPAAT 57
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
K AP GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA
Sbjct: 58 EEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 117
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 118 IMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 177
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
R+GVG N+RSIGKN S IE K K+ +
Sbjct: 178 REGVGQNFRSIGKNKSAIEVKFTGKQVY 205
>gi|131166|sp|P12372.1|PSAD_SOLLC RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|170492|gb|AAA34185.1| photosystem I subunit II protein precursor [Solanum lycopersicum]
gi|226544|prf||1601516A photosystem I reaction center II
Length = 208
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/208 (74%), Positives = 168/208 (80%), Gaps = 5/208 (2%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMA-QRTVRAAAAEEKTEA 59
MATQA LFTP + K++ PWK S SF++PK L +++ R +RA A E
Sbjct: 3 MATQASLFTPPLSVPKSTTA---PWK-QSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAAT 58
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
K AP GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA
Sbjct: 59 EEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 118
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMRQGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPG
Sbjct: 119 IMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 178
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
R+GVG N+RSIGKN S IE K K+ +
Sbjct: 179 REGVGQNFRSIGKNKSAIEVKFTGKQVY 206
>gi|297848534|ref|XP_002892148.1| hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp.
lyrata]
gi|297337990|gb|EFH68407.1| hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 165/203 (81%), Gaps = 10/203 (4%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F+P+I TT ++ L+ + TS + + S + +RA E + A
Sbjct: 1 MATQAAGIFSPAITTTASAVKKLHLFS-------TSHRLKSLSFTKTAIRAEKTESSSAA 53
Query: 60 PT--KEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 117
P +EAPVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGG
Sbjct: 54 PAVKEEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGG 113
Query: 118 AAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 177
AAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK N
Sbjct: 114 AAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKAN 173
Query: 178 PGRQGVGVNYRSIGKNVSPIEHK 200
PGR+GVG+N RSIGKNVSPIE K
Sbjct: 174 PGREGVGLNMRSIGKNVSPIEVK 196
>gi|5732201|emb|CAB52677.1| photosystem I subunit II precursor [Arabidopsis thaliana]
Length = 204
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/202 (72%), Positives = 165/202 (81%), Gaps = 9/202 (4%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F+P+I TT ++ L+ + +S +P + S + +RA E + A
Sbjct: 1 MATQAAGIFSPAITTTTSAVKKLHLFS-------SSHRPKSLSFTKTAIRAEKTESSSAA 53
Query: 60 P-TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
P KEAPVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGA
Sbjct: 54 PAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGA 113
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSK+KI YQFYRVFPNGEVQYLHPKDG+YPEK NP
Sbjct: 114 AIMREGPNLLKLARKEQCLALGTRLRSKFKITYQFYRVFPNGEVQYLHPKDGIYPEKANP 173
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GR+G G+N RSIGKNVSPIE K
Sbjct: 174 GREGFGLNMRSIGKNVSPIEVK 195
>gi|147783781|emb|CAN61448.1| hypothetical protein VITISV_024141 [Vitis vinifera]
Length = 183
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/200 (76%), Positives = 159/200 (79%), Gaps = 24/200 (12%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQAGL TP+ IT S+ L P KP +K +
Sbjct: 1 MATQAGLLTPTTITNPKSRSLTLPSKPWLK------------------------KKLKLL 36
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
+KEAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI
Sbjct: 37 SKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 96
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR
Sbjct: 97 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 156
Query: 181 QGVGVNYRSIGKNVSPIEHK 200
QGVG N+RSIGKNVSPIE K
Sbjct: 157 QGVGQNFRSIGKNVSPIEVK 176
>gi|21293|emb|CAA68728.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 165/202 (81%), Gaps = 3/202 (1%)
Query: 1 MATQAGLFTPSIITTK--TSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTE 58
MATQA LF+PS +++ L +K S+ +F S KP + + R AA +
Sbjct: 3 MATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFAS-KPASRHHSIRAAAAAEGKRAAA 61
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
TKEAP GFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 62 TETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 121
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNP
Sbjct: 122 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNP 181
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG+N RSIGKNVSPIE K
Sbjct: 182 GRQGVGLNMRSIGKNVSPIEVK 203
>gi|15235503|ref|NP_192186.1| photosystem I reaction center subunit II-1 [Arabidopsis thaliana]
gi|38503230|sp|Q9S7H1.1|PSAD1_ARATH RecName: Full=Photosystem I reaction center subunit II-1,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit 1; Short=PSI-D1; Flags: Precursor
gi|11692846|gb|AAG40026.1|AF324675_1 AT4g02770 [Arabidopsis thaliana]
gi|11908080|gb|AAG41469.1|AF326887_1 putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|14488084|gb|AAK63862.1|AF389290_1 AT4g02770/T5J8_7 [Arabidopsis thaliana]
gi|4263525|gb|AAD15351.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|5732199|emb|CAB52676.1| photosystem I subunit II precursor [Arabidopsis thaliana]
gi|7269762|emb|CAB77762.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|17064872|gb|AAL32590.1| Unknown protein [Arabidopsis thaliana]
gi|20148685|gb|AAM10233.1| unknown protein [Arabidopsis thaliana]
gi|20908086|gb|AAM26726.1| AT4g02770/T5J8_7 [Arabidopsis thaliana]
gi|21281091|gb|AAM44987.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
gi|332656828|gb|AEE82228.1| photosystem I reaction center subunit II-1 [Arabidopsis thaliana]
Length = 208
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/209 (73%), Positives = 166/209 (79%), Gaps = 19/209 (9%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F +I T TS + K FS T+ +P + S + +RA EKT++
Sbjct: 1 MATQAAGIFNSAITTAATSGV-----KKLHFFS-TTHRPKSLSFTKTAIRA----EKTDS 50
Query: 60 P--------TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIF 111
TKEAPVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIF
Sbjct: 51 SAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIF 110
Query: 112 EMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGV 171
EMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGV
Sbjct: 111 EMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGV 170
Query: 172 YPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
YPEK NPGR+GVG+N RSIGKNVSPIE K
Sbjct: 171 YPEKANPGREGVGLNMRSIGKNVSPIEVK 199
>gi|21595031|gb|AAM66066.1| putative photosystem I reaction center subunit II precursor
[Arabidopsis thaliana]
Length = 208
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/209 (73%), Positives = 166/209 (79%), Gaps = 19/209 (9%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F +I T TS + K FS T+ +P + S + +RA EKT++
Sbjct: 1 MATQAAGIFNSAITTAATSGV-----KKLHFFS-TTHRPKSLSFTKTAIRA----EKTDS 50
Query: 60 P--------TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIF 111
TKEAPVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIF
Sbjct: 51 SAAAAASPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIF 110
Query: 112 EMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGV 171
EMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGV
Sbjct: 111 EMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGV 170
Query: 172 YPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
YPEK NPGR+GVG+N RSIGKNVSPIE K
Sbjct: 171 YPEKANPGREGVGLNMRSIGKNVSPIEVK 199
>gi|192764631|gb|ACF05859.1| chloroplast photosystem I protein [Populus tremula]
gi|192764633|gb|ACF05860.1| chloroplast photosystem I protein [Populus tremula]
gi|192764651|gb|ACF05869.1| chloroplast photosystem I protein [Populus tremula]
gi|192764653|gb|ACF05870.1| chloroplast photosystem I protein [Populus tremula]
gi|192764659|gb|ACF05873.1| chloroplast photosystem I protein [Populus tremula]
gi|192764663|gb|ACF05875.1| chloroplast photosystem I protein [Populus tremula]
gi|192764667|gb|ACF05877.1| chloroplast photosystem I protein [Populus tremula]
gi|192764683|gb|ACF05885.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 152/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQR+ + AAAEE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQRSFKVAAAEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764681|gb|ACF05884.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 152/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQR+++ AA EE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQRSLKVAAVEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764655|gb|ACF05871.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 151/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQR+ + AA EE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQRSFKVAAVEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764649|gb|ACF05868.1| chloroplast photosystem I protein [Populus tremula]
gi|192764671|gb|ACF05879.1| chloroplast photosystem I protein [Populus tremula]
gi|192764673|gb|ACF05880.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 152/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQ++ + AAAEE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQKSFKVAAAEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764623|gb|ACF05855.1| chloroplast photosystem I protein [Populus tremula]
gi|192764625|gb|ACF05856.1| chloroplast photosystem I protein [Populus tremula]
gi|192764627|gb|ACF05857.1| chloroplast photosystem I protein [Populus tremula]
gi|192764629|gb|ACF05858.1| chloroplast photosystem I protein [Populus tremula]
gi|192764635|gb|ACF05861.1| chloroplast photosystem I protein [Populus tremula]
gi|192764637|gb|ACF05862.1| chloroplast photosystem I protein [Populus tremula]
gi|192764639|gb|ACF05863.1| chloroplast photosystem I protein [Populus tremula]
gi|192764641|gb|ACF05864.1| chloroplast photosystem I protein [Populus tremula]
gi|192764643|gb|ACF05865.1| chloroplast photosystem I protein [Populus tremula]
gi|192764645|gb|ACF05866.1| chloroplast photosystem I protein [Populus tremula]
gi|192764647|gb|ACF05867.1| chloroplast photosystem I protein [Populus tremula]
gi|192764657|gb|ACF05872.1| chloroplast photosystem I protein [Populus tremula]
gi|192764661|gb|ACF05874.1| chloroplast photosystem I protein [Populus tremula]
gi|192764669|gb|ACF05878.1| chloroplast photosystem I protein [Populus tremula]
gi|192764675|gb|ACF05881.1| chloroplast photosystem I protein [Populus tremula]
gi|192764677|gb|ACF05882.1| chloroplast photosystem I protein [Populus tremula]
gi|192764679|gb|ACF05883.1| chloroplast photosystem I protein [Populus tremula]
gi|192764687|gb|ACF05887.1| chloroplast photosystem I protein [Populus tremula]
gi|192764689|gb|ACF05888.1| chloroplast photosystem I protein [Populus tremula]
gi|192764691|gb|ACF05889.1| chloroplast photosystem I protein [Populus tremula]
gi|192764693|gb|ACF05890.1| chloroplast photosystem I protein [Populus tremula]
gi|192764695|gb|ACF05891.1| chloroplast photosystem I protein [Populus tremula]
gi|192764697|gb|ACF05892.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 151/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQR+ + AA EE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQRSFKVAAVEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|192764665|gb|ACF05876.1| chloroplast photosystem I protein [Populus tremula]
gi|192764685|gb|ACF05886.1| chloroplast photosystem I protein [Populus tremula]
Length = 167
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 151/173 (87%), Gaps = 9/173 (5%)
Query: 24 PWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
PWK +S P++ AQ++ + AA EE TKEAPVGFTPP+LDP+TPSPIFG
Sbjct: 4 PWKQSSFL------PISNVKAQKSFKVAAVEETA---TKEAPVGFTPPELDPSTPSPIFG 54
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRL
Sbjct: 55 GSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRL 114
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN SP
Sbjct: 115 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNASP 167
>gi|131167|sp|P29302.1|PSAD_NICSY RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|19748|emb|CAA42623.1| PSI-D2 [Nicotiana sylvestris]
Length = 204
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 169/208 (81%), Gaps = 9/208 (4%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSM-AQRTVRAAAAEEKTEA 59
MATQA LFTP++ K+S PWK S + SPK L ++ A R +RA A E T+
Sbjct: 3 MATQASLFTPALSAPKSSA----PWK--QSLASFSPKQLKSTVSAPRPIRAMAEEAATK- 55
Query: 60 PTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 119
EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA
Sbjct: 56 -EAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAA 114
Query: 120 IMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
IMR+G NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN G
Sbjct: 115 IMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAG 174
Query: 180 RQGVGVNYRSIGKNVSPIEHKTELKKFH 207
RQGVG N+RSIGKN SPIE K K+ +
Sbjct: 175 RQGVGQNFRSIGKNKSPIEVKFTGKQVY 202
>gi|19855891|sp|P12353.2|PSAD_SPIOL RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
Length = 212
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 165/202 (81%), Gaps = 3/202 (1%)
Query: 1 MATQAGLFTPSIITTK--TSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTE 58
MATQA LF+PS +++ L +K S+ +F S KP + + R AA +
Sbjct: 3 MATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFAS-KPASRHHSIRAAAAAEGKAAAA 61
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
TKEAP GFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 62 TETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 121
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNP
Sbjct: 122 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNP 181
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG+N RSIGKNVSPIE K
Sbjct: 182 GRQGVGLNMRSIGKNVSPIEVK 203
>gi|297809853|ref|XP_002872810.1| hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp.
lyrata]
gi|297318647|gb|EFH49069.1| hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 164/207 (79%), Gaps = 17/207 (8%)
Query: 1 MATQA-GLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEA 59
MATQA G+F +I T TS + K FS T+ +P + S + ++RA EKT++
Sbjct: 1 MATQAAGIFNSAITTAATSGV-----KKLHFFS-TTHRPKSLSFTKTSIRA----EKTDS 50
Query: 60 PTKEAP------VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEM 113
AP VGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEM
Sbjct: 51 KAAAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEM 110
Query: 114 PTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYP 173
PTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYP
Sbjct: 111 PTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYP 170
Query: 174 EKVNPGRQGVGVNYRSIGKNVSPIEHK 200
EK NPGR+GVG+N RSIGKNVSPIE K
Sbjct: 171 EKANPGREGVGLNMRSIGKNVSPIEVK 197
>gi|224284858|gb|ACN40159.1| unknown [Picea sitchensis]
Length = 161
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/151 (86%), Positives = 140/151 (92%)
Query: 50 AAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQ 109
AA++ KEAPVGFTPP+L P+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQ
Sbjct: 2 AASSSSPATETEKEAPVGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQ 61
Query: 110 IFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKD 169
IFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKD
Sbjct: 62 IFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKD 121
Query: 170 GVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
GVYPEKVNPGR+GVGVN+RSIGKNV+P + K
Sbjct: 122 GVYPEKVNPGRKGVGVNFRSIGKNVNPSQVK 152
>gi|115477831|ref|NP_001062511.1| Os08g0560900 [Oryza sativa Japonica Group]
gi|29367391|gb|AAO72568.1| chloroplast photosystem I reaction center subunit II precursor-like
protein [Oryza sativa Japonica Group]
gi|45736168|dbj|BAD13214.1| putative photosystem I reaction center subunit II, chloroplast
precursor (Photosystem I 20 kDa subunit) (PSI-D) [Oryza
sativa Japonica Group]
gi|113624480|dbj|BAF24425.1| Os08g0560900 [Oryza sativa Japonica Group]
gi|125562567|gb|EAZ08015.1| hypothetical protein OsI_30281 [Oryza sativa Indica Group]
gi|125604338|gb|EAZ43663.1| hypothetical protein OsJ_28289 [Oryza sativa Japonica Group]
gi|215692685|dbj|BAG88105.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767756|dbj|BAG99984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/183 (78%), Positives = 151/183 (82%), Gaps = 5/183 (2%)
Query: 21 LLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAPTKE---APVGFTPPQLDPNT 77
LL W P S T P S A ++RAAA ++ A T+E AP GF PPQLDPNT
Sbjct: 14 LLAAWAPAKPRSSTLSMPT--SRAPTSLRAAAEDQPAAAATEEKKPAPAGFVPPQLDPNT 71
Query: 78 PSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCL 137
PSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR+GPNLLKLARKEQCL
Sbjct: 72 PSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCL 131
Query: 138 ALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
ALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GRQGVG N+RSIGKNVSPI
Sbjct: 132 ALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPI 191
Query: 198 EHK 200
E K
Sbjct: 192 EVK 194
>gi|116779508|gb|ABK21314.1| unknown [Picea sitchensis]
gi|116787596|gb|ABK24570.1| unknown [Picea sitchensis]
gi|116793969|gb|ABK26950.1| unknown [Picea sitchensis]
gi|148908068|gb|ABR17153.1| unknown [Picea sitchensis]
Length = 234
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/139 (92%), Positives = 136/139 (97%)
Query: 62 KEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 121
KEAPVGFTPP+L P+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
Sbjct: 87 KEAPVGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 146
Query: 122 RQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQ 181
R+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+
Sbjct: 147 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRK 206
Query: 182 GVGVNYRSIGKNVSPIEHK 200
GVGVN+RSIGKNV+P + K
Sbjct: 207 GVGVNFRSIGKNVNPSQVK 225
>gi|413932723|gb|AFW67274.1| photosystem I reaction center subunit II [Zea mays]
Length = 236
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 142/163 (87%), Gaps = 4/163 (2%)
Query: 38 PLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEE 97
P + S A +RA A E TE EAP GF PQLDP+TPSPIFGGSTGGLLRKAQVEE
Sbjct: 70 PPSSSRAPAPLRATAGEAVTE----EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEE 125
Query: 98 FYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVF 157
FYVITW SPKEQ+FEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVF
Sbjct: 126 FYVITWVSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVF 185
Query: 158 PNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PNGEVQYLHPKDGVYPEKVNPGR+GVG N+RSIGKNV+PI+ K
Sbjct: 186 PNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVNPIDVK 228
>gi|195607068|gb|ACG25364.1| photosystem I reaction center subunit II [Zea mays]
gi|195652035|gb|ACG45485.1| photosystem I reaction center subunit II [Zea mays]
Length = 204
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 142/163 (87%), Gaps = 4/163 (2%)
Query: 38 PLTFSMAQRTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEE 97
P + S A +RA A E TE EAP GF PQLDP+TPSPIFGGSTGGLLRKAQVEE
Sbjct: 38 PPSSSRAPAPLRATAGEAVTE----EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEE 93
Query: 98 FYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVF 157
FYVITW SPKEQ+FEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVF
Sbjct: 94 FYVITWVSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVF 153
Query: 158 PNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PNGEVQYLHPKDGVYPEKVNPGR+GVG N+RSIGKNV+PI+ K
Sbjct: 154 PNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVNPIDVK 196
>gi|116780894|gb|ABK21867.1| unknown [Picea sitchensis]
Length = 234
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/139 (92%), Positives = 135/139 (97%)
Query: 62 KEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 121
KEAPVGFTPP+L P+TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
Sbjct: 87 KEAPVGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 146
Query: 122 RQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQ 181
R+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY EKVNPGR+
Sbjct: 147 REGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYQEKVNPGRK 206
Query: 182 GVGVNYRSIGKNVSPIEHK 200
GVGVN+RSIGKNV+P + K
Sbjct: 207 GVGVNFRSIGKNVNPSQVK 225
>gi|268612147|pdb|2WSC|D Chain D, Improved Model Of Plant Photosystem I
gi|268612165|pdb|2WSE|D Chain D, Improved Model Of Plant Photosystem I
gi|268612183|pdb|2WSF|D Chain D, Improved Model Of Plant Photosystem I
Length = 212
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 159/202 (78%), Gaps = 3/202 (1%)
Query: 1 MATQAGLFTPSIITTK--TSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTE 58
M T A LF+ S +++ L +K S+ +F S KP + R AA +
Sbjct: 3 MGTPATLFSRSSLSSAKPIETRLTTSFKQPSAVTFAS-KPASRLHTIRAAAAAEGKAAAA 61
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
TKEA FTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 62 TETKEATKAFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 121
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNP
Sbjct: 122 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNP 181
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG+N RSIGKNVSPIE K
Sbjct: 182 GRQGVGLNMRSIGKNVSPIEVK 203
>gi|212275394|ref|NP_001130880.1| uncharacterized protein LOC100191984 [Zea mays]
gi|194690344|gb|ACF79256.1| unknown [Zea mays]
gi|195624470|gb|ACG34065.1| photosystem I reaction center subunit II [Zea mays]
gi|238008512|gb|ACR35291.1| unknown [Zea mays]
gi|414873510|tpg|DAA52067.1| TPA: photosystem I reaction center subunit II [Zea mays]
Length = 199
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 131/138 (94%)
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EAP GF PQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR
Sbjct: 54 EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMR 113
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 114 EGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 173
Query: 183 VGVNYRSIGKNVSPIEHK 200
VG N+RSIGKNV+PI+ K
Sbjct: 174 VGQNFRSIGKNVNPIDVK 191
>gi|195644572|gb|ACG41754.1| photosystem I reaction center subunit II [Zea mays]
Length = 199
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 130/138 (94%)
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EAP GF PQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR
Sbjct: 54 EAPKGFVAPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMR 113
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
+GPNLLKLAR EQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+G
Sbjct: 114 EGPNLLKLARNEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREG 173
Query: 183 VGVNYRSIGKNVSPIEHK 200
VG N+RSIGKNV+PI+ K
Sbjct: 174 VGQNFRSIGKNVNPIDVK 191
>gi|548603|sp|P36213.1|PSAD_HORVU RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|167085|gb|AAA18567.1| PSI-D subunit [Hordeum vulgare subsp. vulgare]
gi|326520611|dbj|BAK07564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 153/208 (73%), Gaps = 22/208 (10%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAA-------- 52
MATQA T +IT W P++ P+P T +M + R A
Sbjct: 3 MATQASAATRHLITAA--------WSPSAK-----PRPATLAMPS-SARGPAPLFAAAPD 48
Query: 53 AEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFE 112
P + AP GF PPQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FE
Sbjct: 49 TPAPAAPPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFE 108
Query: 113 MPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 172
MPTGGAAIMR+GPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 109 MPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVY 168
Query: 173 PEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PEKVN GRQGVG N+RSIGKNVSPIE K
Sbjct: 169 PEKVNAGRQGVGQNFRSIGKNVSPIEVK 196
>gi|1488649|emb|CAA54744.1| psaD [Spinacia oleracea]
Length = 211
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/202 (71%), Positives = 158/202 (78%), Gaps = 4/202 (1%)
Query: 1 MATQAGLFTPSIITTK--TSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTE 58
M T A LF+ S +++ L +K S+ +F S KP + R AA +
Sbjct: 3 MGTPATLFSRSSLSSAKPIETRLTTSFKQPSAVTFAS-KPASRLHTIRAAAAAEGKAAAA 61
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
TKEA FTPP+LDPNTPSPIF GSTG LLRKAQVEEFYVITWESPKEQIFEMPTGGA
Sbjct: 62 TETKEATKAFTPPELDPNTPSPIFAGSTG-LLRKAQVEEFYVITWESPKEQIFEMPTGGA 120
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNP
Sbjct: 121 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNP 180
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GRQGVG+N RSIGKNVSPIE K
Sbjct: 181 GRQGVGLNMRSIGKNVSPIEVK 202
>gi|357124847|ref|XP_003564108.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Brachypodium distachyon]
Length = 204
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/134 (91%), Positives = 127/134 (94%)
Query: 67 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPN 126
GF PPQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMR+GPN
Sbjct: 62 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPN 121
Query: 127 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVN 186
LLKLARKEQCLALG RLRSKYKI YQFYRVFP+GEVQYLHPKDGVYPEKVN GRQGVG N
Sbjct: 122 LLKLARKEQCLALGNRLRSKYKIAYQFYRVFPSGEVQYLHPKDGVYPEKVNAGRQGVGQN 181
Query: 187 YRSIGKNVSPIEHK 200
+RSIGKNVSPIE K
Sbjct: 182 FRSIGKNVSPIEVK 195
>gi|357444261|ref|XP_003592408.1| Photosystem I reaction center subunit II [Medicago truncatula]
gi|355481456|gb|AES62659.1| Photosystem I reaction center subunit II [Medicago truncatula]
Length = 193
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 153/208 (73%), Gaps = 18/208 (8%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQ LFTP + K ++ + PWK + + SFT+P +++ AA EE TEAP
Sbjct: 3 MATQTTLFTPPFFSAKPNEHVSVPWKQSPTLSFTNPNLFKLTISSNIKTAAVTEEATEAP 62
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
VGFTPP+LDPNTPSPIF EF+VITW+SPKEQIFE+ GGAAI
Sbjct: 63 -----VGFTPPELDPNTPSPIFS-------------EFHVITWDSPKEQIFEIANGGAAI 104
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR 180
MR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 105 MREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNLGR 164
Query: 181 QGVGVNYRSIGKNVSPIEHKTELKKFHK 208
QGVG N+ SIGKNVSPIE K K+ ++
Sbjct: 165 QGVGQNFGSIGKNVSPIEVKFSGKQVYE 192
>gi|302820293|ref|XP_002991814.1| hypothetical protein SELMODRAFT_26984 [Selaginella moellendorffii]
gi|300140352|gb|EFJ07076.1| hypothetical protein SELMODRAFT_26984 [Selaginella moellendorffii]
Length = 147
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/137 (88%), Positives = 129/137 (94%)
Query: 64 APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQ 123
AP GFTPP+L P+TPSPIFGGSTGGLLRKAQVEEFYVITWES KEQIFEMPTGGAAIMR
Sbjct: 2 APAGFTPPELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESGKEQIFEMPTGGAAIMRS 61
Query: 124 GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGV 183
GPNLLKLARKEQCLALGT+LRSK+KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GV
Sbjct: 62 GPNLLKLARKEQCLALGTQLRSKFKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGV 121
Query: 184 GVNYRSIGKNVSPIEHK 200
GVN RSIGKN +P++ K
Sbjct: 122 GVNLRSIGKNCNPVDLK 138
>gi|303324967|pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I
Length = 138
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/129 (94%), Positives = 126/129 (97%)
Query: 72 QLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLA 131
+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLA
Sbjct: 1 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLA 60
Query: 132 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN GRQGVG N+RSIG
Sbjct: 61 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIG 120
Query: 192 KNVSPIEHK 200
KNVSPIE K
Sbjct: 121 KNVSPIEVK 129
>gi|149242530|pdb|2O01|D Chain D, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 138
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/129 (94%), Positives = 126/129 (97%)
Query: 72 QLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLA 131
+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLA
Sbjct: 1 ELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLA 60
Query: 132 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
RKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG+N RSIG
Sbjct: 61 RKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIG 120
Query: 192 KNVSPIEHK 200
KNVSPIE K
Sbjct: 121 KNVSPIEVK 129
>gi|168032913|ref|XP_001768962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679874|gb|EDQ66316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
Query: 43 MAQR-TVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVI 101
MAQ V A+ K +A KEAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVI
Sbjct: 1 MAQAGAVPDGVADRKPDA--KEAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVI 58
Query: 102 TWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGE 161
TWESPKEQIFEMPTGGAAIMR GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGE
Sbjct: 59 TWESPKEQIFEMPTGGAAIMRSGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGE 118
Query: 162 VQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHKTELKKFHKRWLHM 213
VQYLHPKDGVYPEKVN GR VGVN RSIGKN +P ELK HK+ +
Sbjct: 119 VQYLHPKDGVYPEKVNAGRSPVGVNNRSIGKNANP----AELKFAHKQAYDL 166
>gi|167997393|ref|XP_001751403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697384|gb|EDQ83720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/155 (80%), Positives = 136/155 (87%), Gaps = 2/155 (1%)
Query: 53 AEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFE 112
A++K +A KEAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFE
Sbjct: 12 ADQKPDA--KEAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFE 69
Query: 113 MPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 172
MPTGGAAIMR GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 70 MPTGGAAIMRSGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVY 129
Query: 173 PEKVNPGRQGVGVNYRSIGKNVSPIEHKTELKKFH 207
PEKVN GR VGVN RSIGKN +P E K K+ +
Sbjct: 130 PEKVNAGRSPVGVNNRSIGKNANPAELKFAQKQAY 164
>gi|167999452|ref|XP_001752431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696331|gb|EDQ82670.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 131/151 (86%), Gaps = 4/151 (2%)
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EAP GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR
Sbjct: 64 EAPKGFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 123
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
GPNLLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR
Sbjct: 124 SGPNLLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRTA 183
Query: 183 VGVNYRSIGKNVSPIEHKTELKKFHKRWLHM 213
VGVN RSIG+N +P ELK HK+ +
Sbjct: 184 VGVNNRSIGQNANP----AELKFAHKQAYDL 210
>gi|302822633|ref|XP_002992973.1| hypothetical protein SELMODRAFT_448960 [Selaginella moellendorffii]
gi|300139173|gb|EFJ05919.1| hypothetical protein SELMODRAFT_448960 [Selaginella moellendorffii]
Length = 976
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/129 (88%), Positives = 122/129 (94%)
Query: 72 QLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLA 131
+L P+TPSPIFGGSTGGLLRKAQVEEFYVITWES KEQIFEMPTGGAAIMR GPNLLKLA
Sbjct: 839 ELKPDTPSPIFGGSTGGLLRKAQVEEFYVITWESGKEQIFEMPTGGAAIMRSGPNLLKLA 898
Query: 132 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
RKEQCLALGT+LRSK+KI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGVN RSIG
Sbjct: 899 RKEQCLALGTQLRSKFKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIG 958
Query: 192 KNVSPIEHK 200
KN +P++ K
Sbjct: 959 KNCNPVDLK 967
>gi|168026117|ref|XP_001765579.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683217|gb|EDQ69629.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/141 (82%), Positives = 126/141 (89%)
Query: 67 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPN 126
GFTPP L+ +TP+PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR GPN
Sbjct: 14 GFTPPTLNADTPAPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRSGPN 73
Query: 127 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVN 186
LLKLARKEQCLALG RLR+K+KI+YQFYRVFPNGEVQYLHPKDGVYPEKVN GR VGVN
Sbjct: 74 LLKLARKEQCLALGARLRTKFKIQYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRSPVGVN 133
Query: 187 YRSIGKNVSPIEHKTELKKFH 207
RSIGKN +P E K K+ +
Sbjct: 134 NRSIGKNANPAELKFAQKQAY 154
>gi|118488878|gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/124 (91%), Positives = 116/124 (93%)
Query: 77 TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQC 136
P F STGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMR+GPNLLKLARKEQC
Sbjct: 34 VPHHQFLVSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQC 93
Query: 137 LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKNVSP
Sbjct: 94 LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSP 153
Query: 197 IEHK 200
IE K
Sbjct: 154 IEVK 157
>gi|303288528|ref|XP_003063552.1| photosystem I subunit II, chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226454620|gb|EEH51925.1| photosystem I subunit II, chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 225
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 135/177 (76%), Gaps = 7/177 (3%)
Query: 29 SSFSFTS--PKPLTFSMAQRTVRAAAAE---EKTEAPTKEAPVGFTPPQLDPNTPSPIFG 83
+SFS S KP F+ +++V A E EK +EAP ++PP+L+PNTPSPIFG
Sbjct: 28 ASFSGKSVAAKPAYFAAKRQSVLVRAEEKTAEKAVEKKEEAP--WSPPKLNPNTPSPIFG 85
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLLRKAQVEEFYV+TWE+PKE IFEMPTGGAAIMR+GPNLLKLARKEQCLAL +
Sbjct: 86 GSTGGLLRKAQVEEFYVLTWEAPKEMIFEMPTGGAAIMRKGPNLLKLARKEQCLALLNSM 145
Query: 144 RSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
R+K KI YRVFP+GEVQYLHPKDGVYPEKVN GR G N RSIGKN +P K
Sbjct: 146 RAKNKINGCVYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANNNMRSIGKNANPASIK 202
>gi|110681492|emb|CAL25356.1| photosystem I reaction center subunit II [Platanus x acerifolia]
Length = 122
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/113 (94%), Positives = 110/113 (97%)
Query: 88 GLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKY 147
GLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKY
Sbjct: 1 GLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKY 60
Query: 148 KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N+RSIGKN +PIE K
Sbjct: 61 KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNANPIEVK 113
>gi|384249013|gb|EIE22496.1| PSI-D1 precursor [Coccomyxa subellipsoidea C-169]
Length = 192
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 120/150 (80%), Gaps = 9/150 (6%)
Query: 51 AAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQI 110
A AEEK + PP LDP+TPSPIFGGSTGGLLRKAQ+EEFYVITW++ KEQ+
Sbjct: 42 AVAEEK---------AAWKPPTLDPSTPSPIFGGSTGGLLRKAQIEEFYVITWDAKKEQV 92
Query: 111 FEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDG 170
FEMPTGGAAIMR GPNLLKLARKEQCLAL T+LR+K+K Q YRVFP+GEVQYLHPKDG
Sbjct: 93 FEMPTGGAAIMRSGPNLLKLARKEQCLALLTQLRNKFKTDGQIYRVFPDGEVQYLHPKDG 152
Query: 171 VYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
VYPEKVN GR VG RSIGKN +P+ K
Sbjct: 153 VYPEKVNAGRTAVGAKDRSIGKNTNPVAVK 182
>gi|302843549|ref|XP_002953316.1| hypothetical protein VOLCADRAFT_121148 [Volvox carteri f.
nagariensis]
gi|300261413|gb|EFJ45626.1| hypothetical protein VOLCADRAFT_121148 [Volvox carteri f.
nagariensis]
Length = 179
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 118/133 (88%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
+TPP L+P+TPSPIFGGSTGGLLRKAQ EEFYVITW+S KEQIFEMPTGGAAIMRQGPNL
Sbjct: 36 WTPPTLNPDTPSPIFGGSTGGLLRKAQQEEFYVITWDSKKEQIFEMPTGGAAIMRQGPNL 95
Query: 128 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNY 187
LK A+KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVN GR GV N+
Sbjct: 96 LKFAKKEQCLALTTQLRTKFKLTPAFYRVFPDGKVQYLHPADGVYPEKVNAGRVGVNQNF 155
Query: 188 RSIGKNVSPIEHK 200
R IG+NV+PI+ K
Sbjct: 156 RRIGQNVNPIKVK 168
>gi|255083332|ref|XP_002504652.1| photosystem I subunit II, chloroplast precursor [Micromonas sp.
RCC299]
gi|226519920|gb|ACO65910.1| photosystem I subunit II, chloroplast precursor [Micromonas sp.
RCC299]
Length = 216
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 114/133 (85%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
++PP+L+PNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+PKE IFEMPTGGAAIMR+GPNL
Sbjct: 61 WSPPKLNPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAPKEMIFEMPTGGAAIMRKGPNL 120
Query: 128 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNY 187
LKLARKEQCLAL +R+K KI YRVFP+GEVQYLHPKDGVYPEKVN GR G N
Sbjct: 121 LKLARKEQCLALLNSMRAKNKINGCVYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANNNM 180
Query: 188 RSIGKNVSPIEHK 200
RSIGKN +P K
Sbjct: 181 RSIGKNANPASIK 193
>gi|412988213|emb|CCO17549.1| predicted protein [Bathycoccus prasinos]
Length = 199
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 116/142 (81%)
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR 122
EA ++ P+LDPNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+ KEQIFEMPTGGAAIMR
Sbjct: 53 EAAPAWSAPKLDPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAKKEQIFEMPTGGAAIMR 112
Query: 123 QGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
+GPNLLKLARKEQC+AL T R+K YRVFP+GEVQYLHPKDGVYPEKVN GR G
Sbjct: 113 KGPNLLKLARKEQCMALVTTFRAKKIANGCIYRVFPSGEVQYLHPKDGVYPEKVNAGRVG 172
Query: 183 VGVNYRSIGKNVSPIEHKTELK 204
N RSIGKN +P+ K + K
Sbjct: 173 ANQNMRSIGKNTNPVNVKFQGK 194
>gi|307107051|gb|EFN55295.1| hypothetical protein CHLNCDRAFT_35549 [Chlorella variabilis]
Length = 186
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/168 (66%), Positives = 128/168 (76%), Gaps = 9/168 (5%)
Query: 42 SMAQRTVRAAAAEEKT-------EAPTKEA--PVGFTPPQLDPNTPSPIFGGSTGGLLRK 92
S+A R V AAA +++ A K+A P + PP LD + PSPIFGGSTGGLLR+
Sbjct: 10 SLAGRQVTAAAPKQRVAAARFVVRAEEKKAAEPKPWAPPALDASAPSPIFGGSTGGLLRQ 69
Query: 93 AQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQ 152
AQVEEF+VITWE+ KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL T+LR+K+K
Sbjct: 70 AQVEEFHVITWEAKKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALLTQLRTKFKTDGF 129
Query: 153 FYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
YRVFPNGEVQYLHPKDGVYPEKVN GR G N R IG+N +P + K
Sbjct: 130 IYRVFPNGEVQYLHPKDGVYPEKVNAGRSGDNTNMRRIGQNTNPSQIK 177
>gi|159479282|ref|XP_001697722.1| photosystem I reaction center subunit II, 20 kDa [Chlamydomonas
reinhardtii]
gi|2499965|sp|Q39615.1|PSAD_CHLRE RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|18478582|gb|AAL73208.1|AF335592_1 photosystem I subunit [Chlamydomonas reinhardtii]
gi|498824|emb|CAA56122.1| psaD [Chlamydomonas reinhardtii]
gi|1644293|emb|CAA52440.1| PSI reaction center, subunit II [Chlamydomonas reinhardtii]
gi|158274090|gb|EDO99874.1| photosystem I reaction center subunit II, 20 kDa [Chlamydomonas
reinhardtii]
Length = 196
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/133 (75%), Positives = 114/133 (85%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
+T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMRQGPNL
Sbjct: 53 WTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNL 112
Query: 128 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNY 187
LK +KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVN GR G N
Sbjct: 113 LKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNM 172
Query: 188 RSIGKNVSPIEHK 200
R IG+NV+PI+ K
Sbjct: 173 RRIGQNVNPIKVK 185
>gi|145354139|ref|XP_001421350.1| psaD, PSI-D, subunit II, photosystem I protein [Ostreococcus
lucimarinus CCE9901]
gi|144581587|gb|ABO99643.1| psaD, PSI-D, subunit II, photosystem I protein [Ostreococcus
lucimarinus CCE9901]
Length = 192
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 113/137 (82%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
+T P+L+PNTPSPIFGGSTGGLLRKAQVEEFYV+TWE+ KE IFEMPTGGAAIMR+GPNL
Sbjct: 50 WTAPKLNPNTPSPIFGGSTGGLLRKAQVEEFYVLTWEAKKEAIFEMPTGGAAIMRKGPNL 109
Query: 128 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNY 187
LKLARKEQCLAL R+K K+ YRVFP+GEVQYLHPKDGVYPEKVN GR G N
Sbjct: 110 LKLARKEQCLALLNNFRAKMKLDGCIYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANQNM 169
Query: 188 RSIGKNVSPIEHKTELK 204
RSIGKN +P K + K
Sbjct: 170 RSIGKNTNPASIKFQGK 186
>gi|75266871|sp|Q9T4W8.1|PSAD_CYAPA RecName: Full=Photosystem I reaction center subunit II, cyanelle;
AltName: Full=Photosystem I 20 kDa subunit; Short=PSI-D;
Flags: Precursor
gi|6687268|emb|CAB64901.1| photosystem I reaction centre subunit II precursor [Cyanophora
paradoxa]
Length = 220
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 110/138 (79%), Gaps = 1/138 (0%)
Query: 64 APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQ 123
AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR
Sbjct: 70 APKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRA 129
Query: 124 GPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQG 182
G NLL+LARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHPKDGV+PEKVNPGR
Sbjct: 130 GENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVA 189
Query: 183 VGVNYRSIGKNVSPIEHK 200
VG N R IG+N P + K
Sbjct: 190 VGSNKRRIGQNPDPAKLK 207
>gi|411120559|ref|ZP_11392931.1| PsaD protein [Oscillatoriales cyanobacterium JSC-12]
gi|410709228|gb|EKQ66743.1| PsaD protein [Oscillatoriales cyanobacterium JSC-12]
Length = 139
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 100/121 (82%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPT GAA+MRQG NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPTAGAAVMRQGDNLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEH 199
GT+L++K+KI Y+ YRVFPNG++QYLHP DGVYPEKVNPGR V R+IGKN P +
Sbjct: 70 GTQLKTKFKIDYKIYRVFPNGDIQYLHPADGVYPEKVNPGRVAVNSVPRNIGKNPDPAKL 129
Query: 200 K 200
K
Sbjct: 130 K 130
>gi|11467707|ref|NP_050759.1| photosystem I subunit II [Guillardia theta]
gi|6093799|sp|O78502.1|PSAD_GUITH RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|3603032|gb|AAC35693.1| PSI ferredoxin-binding protein II (chloroplast) [Guillardia theta]
Length = 141
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LAR
Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLAR 64
Query: 133 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLALGT++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR GVG SIG
Sbjct: 65 KEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIG 124
Query: 192 KNVSPIEHKTELKKF 206
KN++P + K K F
Sbjct: 125 KNLNPAQIKFTNKSF 139
>gi|149072004|ref|YP_001293570.1| photosystem I subunit II [Rhodomonas salina]
gi|134302955|gb|ABO70759.1| photosystem I subunit II [Rhodomonas salina]
Length = 141
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ PSP F GSTGG LR A+VEE Y ITW SPKEQ+FEMPTGGAAIMRQG NLL LAR
Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAEVEEKYAITWTSPKEQVFEMPTGGAAIMRQGENLLYLAR 64
Query: 133 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLAL T++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVN GR GVG SIG
Sbjct: 65 KEQCLALATQVKNSFKITDYKVYRIFPSGEVQYLHPKDGVFPEKVNAGRVGVGNVSHSIG 124
Query: 192 KNVSPIEHKTELKKFH 207
KN++P + K K F+
Sbjct: 125 KNLNPAQIKFTSKSFN 140
>gi|189095334|ref|YP_001936347.1| photosystem I subunit II [Heterosigma akashiwo]
gi|157694677|gb|ABV65953.1| photosystem I reaction center subunit II [Heterosigma akashiwo]
gi|157777908|gb|ABV70094.1| photosystem I reaction center subunit II [Heterosigma akashiwo]
Length = 139
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 102/128 (79%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ T SPIFGGSTGG LR A++EE YVITW S KEQ+FEMPTGGAAIM QG NLL LAR
Sbjct: 3 LNLQTFSPIFGGSTGGWLRAAEIEEKYVITWSSSKEQLFEMPTGGAAIMLQGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LRS Y+ YR+FPNGE+QYLHPKDGV+PEKVNPGR VG SIGK
Sbjct: 63 KEQCLALGTQLRSFKINDYKIYRLFPNGEIQYLHPKDGVFPEKVNPGRLAVGSRNFSIGK 122
Query: 193 NVSPIEHK 200
N +P+ K
Sbjct: 123 NPNPVSVK 130
>gi|51209954|ref|YP_063618.1| photosystem I subunit II [Gracilaria tenuistipitata var. liui]
gi|50657708|gb|AAT79693.1| photosystem I reaction center subunit II [Gracilaria tenuistipitata
var. liui]
Length = 141
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
+D PSP FGGSTGG LR A++EE Y ITW S +EQIFEMP GGAAIMR+G NLL LAR
Sbjct: 5 IDLKMPSPTFGGSTGGWLRSAEIEEKYAITWTSKQEQIFEMPIGGAAIMREGNNLLYLAR 64
Query: 133 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLAL T+L+ ++KIK ++ YR+FPN EVQYLHPKDGV+PEKVNPGR G+G SIG
Sbjct: 65 KEQCLALSTQLKMQFKIKDFKIYRIFPNSEVQYLHPKDGVFPEKVNPGRVGIGNIDHSIG 124
Query: 192 KNVSPIEHK 200
KN P+ K
Sbjct: 125 KNEDPVNKK 133
>gi|330850834|ref|YP_004376584.1| photosystem I ferredoxin-binding protein [Fistulifera sp. JPCC
DA0580]
gi|328835654|dbj|BAK18950.1| photosystem I ferredoxin-binding protein [Fistulifera sp. JPCC
DA0580]
Length = 139
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/128 (70%), Positives = 99/128 (77%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW SPKEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSPKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRSAVNSRQFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|90994471|ref|YP_536961.1| photosystem I subunit II [Pyropia yezoensis]
gi|122194699|sp|Q1XDK7.1|PSAD_PORYE RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|90819035|dbj|BAE92404.1| Photosystem I reaction centre subunit II [Pyropia yezoensis]
Length = 141
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 70 PPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLK 129
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLY 61
Query: 130 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYR 188
LA+KEQCLALGT+L+SK+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR V
Sbjct: 62 LAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDH 121
Query: 189 SIGKNVSPIEHK 200
SIG+N++P++ K
Sbjct: 122 SIGQNINPVDVK 133
>gi|374249434|ref|YP_005088653.1| psaD gene product [Phaeocystis antarctica]
gi|340008125|gb|AEK26757.1| photosystem I subunit II [Phaeocystis antarctica]
Length = 141
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
LD SP FGGSTGG LR A+ EE Y ITW S KEQIFEMPT G+AIM++G NLL LA+
Sbjct: 5 LDLQIASPTFGGSTGGWLRAAETEEKYAITWTSKKEQIFEMPTSGSAIMQKGENLLYLAK 64
Query: 133 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLALGT+LR+ +KI Y+ YR+FPN EVQYLHPKDGV+PEK+N GR GVG SIG
Sbjct: 65 KEQCLALGTQLRTSFKINDYKIYRIFPNSEVQYLHPKDGVFPEKLNAGRLGVGNVMHSIG 124
Query: 192 KNVSPIEHK 200
KN P+ K
Sbjct: 125 KNAQPVNVK 133
>gi|11465745|ref|NP_053889.1| photosystem I subunit II [Porphyra purpurea]
gi|1709817|sp|P51279.1|PSAD_PORPU RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|1276745|gb|AAC08165.1| Photosystem I reaction centre subunit II (chloroplast) [Porphyra
purpurea]
Length = 141
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 70 PPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLK 129
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLY 61
Query: 130 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYR 188
LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR +
Sbjct: 62 LAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDH 121
Query: 189 SIGKNVSPIEHK 200
SIGKNV+PI K
Sbjct: 122 SIGKNVNPINVK 133
>gi|378787317|gb|AFC39948.1| photosystem I subunit II [Porphyra umbilicalis]
Length = 141
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 70 PPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLK 129
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLY 61
Query: 130 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYR 188
LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR +
Sbjct: 62 LAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRDSINSVDH 121
Query: 189 SIGKNVSPIEHK 200
SIGKNV+P+ K
Sbjct: 122 SIGKNVNPVNVK 133
>gi|118410999|ref|YP_874394.1| photosystem I ferredoxin-binding protein [Phaeodactylum
tricornutum]
gi|116739746|gb|ABK20617.1| photosystem I ferredoxin-binding protein [Phaeodactylum
tricornutum]
Length = 139
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 98/128 (76%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW SPKEQIFEMP GGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSPKEQIFEMPIGGAAIMRSGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTAVNNRDFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|378824501|ref|YP_005089671.1| psaD gene product (chloroplast) [Synedra acus]
gi|371572700|gb|AEX37796.1| photosystem I subunit II (chloroplast) [Synedra acus]
Length = 139
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 97/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSTKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRSAVNSREFSIGK 122
Query: 193 NVSPIEHK 200
N P K
Sbjct: 123 NPEPASVK 130
>gi|443316371|ref|ZP_21045818.1| PsaD [Leptolyngbya sp. PCC 6406]
gi|442784042|gb|ELR93935.1| PsaD [Leptolyngbya sp. PCC 6406]
Length = 142
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA VEE Y ITW S +EQ+FE+PTGGAAIM +G NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAAVEEKYAITWTSTQEQVFELPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 139 LGTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K + Y+ YR++PNGE QYLHP DGV+PEKVN GR+ VG RSIGKN
Sbjct: 69 LGTQLRTKFKPKIVDYKIYRIYPNGETQYLHPADGVFPEKVNEGREAVGSVSRSIGKNPD 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|11467501|ref|NP_043647.1| photosystem I subunit II [Odontella sinensis]
gi|1346824|sp|P49481.1|PSAD_ODOSI RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|1185196|emb|CAA91679.1| PSI, ferredoxin-binding protein II [Odontella sinensis]
Length = 139
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 98/128 (76%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|299830538|ref|YP_003734986.1| photosystem I protein subunit II [Durinskia baltica]
gi|297384902|gb|ADI40201.1| photosystem I protein subunit II [Durinskia baltica]
Length = 139
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 97/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRSAEVEEKYAITWTSSKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR + SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRVAMNSRDFSIGK 122
Query: 193 NVSPIEHK 200
N P K
Sbjct: 123 NPDPASIK 130
>gi|299830333|ref|YP_003734548.1| ferredoxin-binding protein II [Kryptoperidinium foliaceum]
gi|297385035|gb|ADI40333.1| ferredoxin-binding protein II [Kryptoperidinium foliaceum]
Length = 139
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 97/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSSKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR SIGK
Sbjct: 63 KEQCLALGTQLRTFKINNYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRVAANSRDFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|428204410|ref|YP_007082999.1| PsaD [Pleurocapsa sp. PCC 7327]
gi|427981842|gb|AFY79442.1| PsaD [Pleurocapsa sp. PCC 7327]
Length = 142
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/120 (71%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLTKADVEEKYAITWTSPKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
G +LR+K+K K Y+ YR++PNGE+QYLHP DGV+PEKVN GR VG RSIGKN P
Sbjct: 70 GAQLRTKFKPKIENYKIYRIYPNGEIQYLHPADGVFPEKVNEGRVAVGKKDRSIGKNPEP 129
>gi|3334300|sp|O07115.1|PSAD_MASLA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|2160762|gb|AAC64637.1| photosystem I protein PsaD [Fischerella sp. PCC 7605]
Length = 142
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 97/122 (79%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MRQG NLL LARKEQC+A
Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIA 68
Query: 139 LGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
LG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGRQ V N R IG+N P +
Sbjct: 69 LGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAK 128
Query: 199 HK 200
K
Sbjct: 129 LK 130
>gi|428227084|ref|YP_007111181.1| photosystem I protein PsaD [Geitlerinema sp. PCC 7407]
gi|427986985|gb|AFY68129.1| photosystem I protein PsaD [Geitlerinema sp. PCC 7407]
Length = 142
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 99/125 (79%), Gaps = 3/125 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA+VEE Y ITW S K+Q+FEMPTGGAA+M +G NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAEVEEKYAITWTSKKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LG +LR+K+K K Y+ YRVFPNGE+QYLHPKDGV+PEKVN GR V N R IG N
Sbjct: 69 LGAQLRTKFKPKMEDYKIYRVFPNGEIQYLHPKDGVFPEKVNEGRTSVNHNPRKIGDNPQ 128
Query: 196 PIEHK 200
P + K
Sbjct: 129 PAKVK 133
>gi|118411153|ref|YP_874547.1| photosystem I ferredoxin-binding protein [Thalassiosira pseudonana]
gi|224015766|ref|XP_002297531.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|116739900|gb|ABK20770.1| photosystem I ferredoxin-binding protein [Thalassiosira pseudonana]
gi|220967795|gb|EED86171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 97/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSTKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|118488395|gb|ABK96014.1| unknown [Populus trichocarpa]
Length = 97
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 85/88 (96%)
Query: 113 MPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 172
MPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY
Sbjct: 1 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 60
Query: 173 PEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PEKVNPGRQGVG N+RSIGKN SPIE K
Sbjct: 61 PEKVNPGRQGVGQNFRSIGKNASPIEVK 88
>gi|354567816|ref|ZP_08986984.1| photosystem I protein PsaD [Fischerella sp. JSC-11]
gi|353542274|gb|EHC11738.1| photosystem I protein PsaD [Fischerella sp. JSC-11]
Length = 159
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/119 (71%), Positives = 99/119 (83%), Gaps = 2/119 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAAIMRQG NLL LARKEQC+A
Sbjct: 26 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAIMRQGQNLLYLARKEQCIA 85
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG +LR K+KI Y+ YR++PNGE Y+HP DGV+PEKVN GR+ V N R IG+N SP
Sbjct: 86 LGGQLR-KFKITDYKIYRIYPNGETVYIHPADGVFPEKVNQGREKVRYNDRRIGQNPSP 143
>gi|14285687|sp|O96800.1|PSAD_SKECO RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|4210385|emb|CAA10621.1| PSI ferredoxin-binding protein II [Skeletonema costatum]
Length = 139
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 97/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LAR
Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 123 NPNPASIK 130
>gi|71842310|ref|YP_277398.1| photosystem I subunit II [Emiliania huxleyi]
gi|52547770|gb|AAU81920.1| photosystem I subunit II [Emiliania huxleyi]
gi|60101553|gb|AAX13897.1| photosystem I subunit II [Emiliania huxleyi]
gi|336286221|gb|AEI29557.1| photosystem I subunit II [Emiliania huxleyi]
Length = 142
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
T L+ P+P FGGSTGG LR A++EE Y ITW S KEQIFEMPT GAAIM++G NL
Sbjct: 1 MTSDVLNLQIPTPTFGGSTGGWLRAAEIEEKYAITWTSKKEQIFEMPTSGAAIMQKGENL 60
Query: 128 LKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVN 186
L LA+KEQCLAL T+LR+ +KI Y+ YR+FPN EVQYLHPKDGV+PEK+N GR GVG
Sbjct: 61 LYLAKKEQCLALSTQLRTLFKISDYKIYRIFPNSEVQYLHPKDGVFPEKLNEGRIGVGNV 120
Query: 187 YRSIGKNVSPIEHK 200
SIGKN +P+ K
Sbjct: 121 GYSIGKNPNPVNVK 134
>gi|242624263|ref|YP_003002181.1| photosystem I reaction center subunit II [Aureoumbra lagunensis]
gi|239997371|gb|ACS36893.1| photosystem I reaction center subunit II [Aureoumbra lagunensis]
Length = 139
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 96/128 (75%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
LD +PIF GSTGG LR AQVEE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPIFEGSTGGWLRAAQVEEKYAITWGSSKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR VG SIGK
Sbjct: 63 KEQCLALGTQLRTFKITDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRIQVGKRDFSIGK 122
Query: 193 NVSPIEHK 200
N +P+ K
Sbjct: 123 NPNPVTVK 130
>gi|119493634|ref|ZP_01624283.1| photosystem I subunit II [Lyngbya sp. PCC 8106]
gi|119452554|gb|EAW33738.1| photosystem I subunit II [Lyngbya sp. PCC 8106]
Length = 142
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 100/124 (80%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL KA++EE Y ITW SPKEQ+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLSKAEIEEKYAITWTSPKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PEKVN GR G R+IG N P
Sbjct: 70 GTQLRTKFKPKIEDFKIYRIYPNGEMEYLHPKDGVFPEKVNEGRDFYGKIERNIGANPDP 129
Query: 197 IEHK 200
+ K
Sbjct: 130 AKVK 133
>gi|308512626|gb|ADO32968.1| photosystem I 20kDa subunit [Galdieria sulphuraria]
gi|452821473|gb|EME28503.1| [pt] photosystem I subunit II [Galdieria sulphuraria]
Length = 141
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ PSP FGGSTGG LR A+ EE Y ITW S E++FEMPT GAA+MR G NLL AR
Sbjct: 5 LNLKMPSPSFGGSTGGWLRSAENEEKYAITWISKNEEVFEMPTAGAALMRSGENLLYFAR 64
Query: 133 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCL+LGT+L++++KI Y+ YRVFPNGE+QYLHPKDGV+PEKVN GR+ + RSIG
Sbjct: 65 KEQCLSLGTQLKTQFKIDNYKIYRVFPNGEIQYLHPKDGVFPEKVNEGRKAINTLTRSIG 124
Query: 192 KNVSPI 197
KN P+
Sbjct: 125 KNPDPV 130
>gi|403225213|gb|AFR24825.1| photosystem I reaction center subunit II [uncultured Pelagomonas]
Length = 139
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 95/128 (74%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
LD +PIFGGSTGG LR AQ+EE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPIFGGSTGGWLRAAQIEEKYAITWSSAKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRVQANNRQFSIGK 122
Query: 193 NVSPIEHK 200
N +P+ K
Sbjct: 123 NPNPVAVK 130
>gi|434391350|ref|YP_007126297.1| photosystem I protein PsaD [Gloeocapsa sp. PCC 7428]
gi|428263191|gb|AFZ29137.1| photosystem I protein PsaD [Gloeocapsa sp. PCC 7428]
Length = 168
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 101/124 (81%), Gaps = 2/124 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA EE YVITW SPK+Q+FEMPTGG AIM+QGPN L+LARKE C+A
Sbjct: 9 TPIFGGSTGGLLTKAFREEKYVITWTSPKQQVFEMPTGGTAIMQQGPNKLELARKEYCIA 68
Query: 139 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
L G +LR+K++I Y+ YRV+PNGEVQYLHP DGV+PEKVN GRQ VG R+IGKN P
Sbjct: 69 LGGQQLRTKFRITDYKIYRVYPNGEVQYLHPSDGVFPEKVNEGRQKVGYVDRNIGKNPDP 128
Query: 197 IEHK 200
+ K
Sbjct: 129 AKLK 132
>gi|242620038|ref|YP_003002042.1| photosystem I reaction center subunit II [Aureococcus
anophagefferens]
gi|239997283|gb|ACS36806.1| photosystem I reaction center subunit II [Aureococcus
anophagefferens]
Length = 139
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 95/128 (74%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
LD +P+FGGSTGG LR AQ+EE Y ITW S K QIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LDSQIQTPLFGGSTGGWLRAAQIEEKYAITWSSSKSQIFEMPTGGAAIMRTGQNLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
KEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEK N GR SIGK
Sbjct: 63 KEQCLALGTQLRTFKITDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRVQANNRQFSIGK 122
Query: 193 NVSPIEHK 200
N +P+ K
Sbjct: 123 NPNPVAVK 130
>gi|194705220|gb|ACF86694.1| unknown [Zea mays]
Length = 96
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/88 (90%), Positives = 85/88 (96%)
Query: 113 MPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 172
MPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 1 MPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVY 60
Query: 173 PEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PEKVNPGR+GVG N+RSIGKNV+PI+ K
Sbjct: 61 PEKVNPGREGVGQNFRSIGKNVNPIDVK 88
>gi|209524649|ref|ZP_03273196.1| photosystem I protein PsaD [Arthrospira maxima CS-328]
gi|376002651|ref|ZP_09780475.1| Photosystem I reaction center subunit II (Photosystem I 16 kDa
polypeptide) (PSI-D) [Arthrospira sp. PCC 8005]
gi|409990266|ref|ZP_11273666.1| photosystem I protein PsaD [Arthrospira platensis str. Paraca]
gi|423067656|ref|ZP_17056446.1| photosystem I protein PsaD [Arthrospira platensis C1]
gi|209494793|gb|EDZ95101.1| photosystem I protein PsaD [Arthrospira maxima CS-328]
gi|291568537|dbj|BAI90809.1| photosystem I reaction center subunit II [Arthrospira platensis
NIES-39]
gi|375328977|emb|CCE16228.1| Photosystem I reaction center subunit II (Photosystem I 16 kDa
polypeptide) (PSI-D) [Arthrospira sp. PCC 8005]
gi|406710761|gb|EKD05964.1| photosystem I protein PsaD [Arthrospira platensis C1]
gi|409938868|gb|EKN80132.1| photosystem I protein PsaD [Arthrospira platensis str. Paraca]
Length = 142
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KAQVEE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKEQCLA
Sbjct: 9 APKFGGSTGGLLTKAQVEEKYAITWTSTKEQVFEMPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K ++ YR+FPNGE++YLHPKDGV+PEKVN GR+ G R IG N +
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIFPNGEMEYLHPKDGVFPEKVNEGREFNGKIDRKIGDNPN 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|297737029|emb|CBI26230.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/124 (73%), Positives = 100/124 (80%), Gaps = 7/124 (5%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEEKTEAP 60
MATQA LFTP++ + + PWK +SS SFT+PK S+A RT A AEE AP
Sbjct: 1 MATQASLFTPTL----SGDRVTVPWKSSSSLSFTTPKLPKSSVAPRTTIRAMAEE---AP 53
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
TKEAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITW+SPKEQIFEMPTGGAAI
Sbjct: 54 TKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAI 113
Query: 121 MRQG 124
MRQG
Sbjct: 114 MRQG 117
>gi|332711288|ref|ZP_08431220.1| PsaD [Moorea producens 3L]
gi|332349837|gb|EGJ29445.1| PsaD [Moorea producens 3L]
Length = 142
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 97/121 (80%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA+VEE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTKAEVEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K Y+ YRV+PNGE+Q+LHP DGV+PEKVN GR G R+IG N
Sbjct: 69 LGTQLRTKFKPKIEDYKIYRVYPNGEIQFLHPADGVFPEKVNEGRPYAGKIDRNIGSNPE 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|300867532|ref|ZP_07112182.1| photosystem I protein PsaD [Oscillatoria sp. PCC 6506]
gi|300334420|emb|CBN57352.1| photosystem I protein PsaD [Oscillatoria sp. PCC 6506]
Length = 141
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 99/128 (77%), Gaps = 2/128 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIMRQG NLL L RKEQC+AL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPTGGAAIMRQGDNLLYLPRKEQCIAL 69
Query: 140 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
G +LR+K+KI Y+ YR+FP+G +YLHPKDGV+PEKVN GR VG R+IG N +P
Sbjct: 70 GGQQLRAKFKITNYKIYRIFPDGSTEYLHPKDGVFPEKVNEGRPKVGSVERNIGSNPNPA 129
Query: 198 EHKTELKK 205
K KK
Sbjct: 130 TLKFSGKK 137
>gi|428311126|ref|YP_007122103.1| PsaD [Microcoleus sp. PCC 7113]
gi|428252738|gb|AFZ18697.1| PsaD [Microcoleus sp. PCC 7113]
Length = 141
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KAQVEE Y ITW SPK+Q+FEMPTGGAA+M +G NLL L+RKE C+A
Sbjct: 9 APIFGGSTGGLLTKAQVEEKYAITWTSPKQQVFEMPTGGAAVMNEGDNLLYLSRKEYCIA 68
Query: 139 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
L G +LR+K+KI Y+ YR+FPNGE+QYLHP DGV+PEKVN GR VG R+IG+N P
Sbjct: 69 LGGQQLRAKFKINNYKIYRIFPNGEIQYLHPADGVFPEKVNKGRPYVGKVDRNIGRNPEP 128
Query: 197 IEHKTELKK 205
K KK
Sbjct: 129 ATLKFSSKK 137
>gi|254409906|ref|ZP_05023686.1| photosystem I reaction center subunit II [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182942|gb|EDX77926.1| photosystem I reaction center subunit II [Coleofasciculus
chthonoplastes PCC 7420]
Length = 156
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 98/124 (79%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P+FGGSTGGLL KAQVEE Y ITW S K+Q+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 24 PLFGGSTGGLLTKAQVEEKYAITWTSSKKQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 83
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+++K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR VG R IG N P
Sbjct: 84 GTQLRTQFKPKMEDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRPFVGKIDRKIGNNPEP 143
Query: 197 IEHK 200
+ K
Sbjct: 144 VTLK 147
>gi|193875812|gb|ACF24542.1| photosystem I reaction center subunit II [Gymnochlora stellata]
Length = 277
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 104/138 (75%), Gaps = 3/138 (2%)
Query: 45 QRTVRAAAAEEKT-EAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITW 103
+R++R AA+ K + T+ FT P LDPNTP P F G+TGGLLR A +EFY IT+
Sbjct: 53 RRSLRMHAADTKAADTKTETETYTFTAPALDPNTPMPRFQGNTGGLLRSASFQEFYAITF 112
Query: 104 ESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRV--FPNGE 161
ESPKEQIFEMPTGGAA MR+GPNL+K ARKEQCLAL T+LR+K+KI YR+ GE
Sbjct: 113 ESPKEQIFEMPTGGAAEMRKGPNLVKFARKEQCLALLTQLRTKFKINGNIYRIDQAAGGE 172
Query: 162 VQYLHPKDGVYPEKVNPG 179
V +LHPKDG+YPEKV+PG
Sbjct: 173 VTHLHPKDGIYPEKVHPG 190
>gi|307152836|ref|YP_003888220.1| photosystem I protein PsaD [Cyanothece sp. PCC 7822]
gi|306983064|gb|ADN14945.1| photosystem I protein PsaD [Cyanothece sp. PCC 7822]
Length = 141
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 97/129 (75%), Gaps = 3/129 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA +EE Y ITW SPKEQ+FE+PTGGAAIM +G NLL LARKEQC+AL
Sbjct: 9 PKFGGSTGGLLSKANLEEKYAITWTSPKEQVFELPTGGAAIMNEGDNLLYLARKEQCIAL 68
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
G + RSK+K K Y+ YR+FPNGE++YLHP DGV+PEKVN GR G RSIGKN P
Sbjct: 69 GGQFRSKFKPKIDNYKIYRIFPNGEIEYLHPADGVFPEKVNEGRAYNGKKDRSIGKNPEP 128
Query: 197 IEHKTELKK 205
K KK
Sbjct: 129 ATLKFSGKK 137
>gi|443323569|ref|ZP_21052574.1| PsaD [Gloeocapsa sp. PCC 73106]
gi|442786749|gb|ELR96477.1| PsaD [Gloeocapsa sp. PCC 73106]
Length = 142
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL A EE Y ITW S KEQ+FEMPTGGAAIM +G N+L LARKEQCLA
Sbjct: 9 TPKFGGSTGGLLSAADREEKYAITWTSSKEQVFEMPTGGAAIMNEGDNILYLARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LG +LR+K+K K ++ YRVFPNGEVQYLHP DGV+PEKVNPGR+ G RSIGKN
Sbjct: 69 LGGQLRTKFKPKIENFKIYRVFPNGEVQYLHPADGVFPEKVNPGREYNGKIDRSIGKNPE 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|434400342|ref|YP_007134346.1| photosystem I protein PsaD [Stanieria cyanosphaera PCC 7437]
gi|428271439|gb|AFZ37380.1| photosystem I protein PsaD [Stanieria cyanosphaera PCC 7437]
Length = 142
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 96/121 (79%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KAQVEE Y ITW SPKEQ+FEMPTGGAA M +G N+L LARKEQC+A
Sbjct: 9 APQFGGSTGGLLYKAQVEEKYAITWTSPKEQVFEMPTGGAATMNEGDNILYLARKEQCIA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
+G +LR+K+K K Y+ YR++PNGEVQYLHP DGV+PEKVN GR+ G R IG N +
Sbjct: 69 MGAQLRTKFKPKIENYKIYRIYPNGEVQYLHPADGVFPEKVNEGREYNGKIDRKIGDNPN 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|32307484|gb|AAP79147.1| photosystem I protein PsaD [Bigelowiella natans]
Length = 278
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 102/136 (75%), Gaps = 6/136 (4%)
Query: 46 RTVRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWES 105
RT AAA E+ + P FTPP LDPNTP P F G+TGGLLR A +EFY IT+ES
Sbjct: 58 RTPNAAATEKAVDT----EPYVFTPPTLDPNTPMPRFQGNTGGLLRSASFQEFYAITFES 113
Query: 106 PKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRV--FPNGEVQ 163
PK+QIFEMPTGGAA MR+G NL+K ARKEQCLAL T+LR+K+KI YR+ GEV+
Sbjct: 114 PKDQIFEMPTGGAAEMRKGKNLVKFARKEQCLALLTQLRTKFKIDGFIYRINQAKGGEVE 173
Query: 164 YLHPKDGVYPEKVNPG 179
YLHPKDG+YPEKV+PG
Sbjct: 174 YLHPKDGIYPEKVHPG 189
>gi|315320504|ref|YP_004072560.1| photosystem I reaction center subunit II [Thalassiosira oceanica
CCMP1005]
gi|283568977|gb|ADB27514.1| photosystem I reaction center subunit II [Thalassiosira oceanica
CCMP1005]
gi|397582585|gb|EJK52341.1| hypothetical protein THAOC_28388 [Thalassiosira oceanica]
gi|397588302|gb|EJK54217.1| hypothetical protein THAOC_26187 [Thalassiosira oceanica]
gi|397593034|gb|EJK55845.1| hypothetical protein THAOC_24369 [Thalassiosira oceanica]
Length = 139
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 92/124 (74%)
Query: 77 TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQC 136
T P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LARKEQC
Sbjct: 7 TSFPTFGGSTGGWLRAAEVEEKYAITWTSSKEQIFEMPTGGSAIMRNGENLLYLARKEQC 66
Query: 137 LALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LAL T+L++ Y+ YR+FP+GEVQYLHPKDGV PEKVNPGR SIGKN +P
Sbjct: 67 LALSTQLKTFKVNDYKIYRIFPSGEVQYLHPKDGVAPEKVNPGRTAANSRSFSIGKNPNP 126
Query: 197 IEHK 200
K
Sbjct: 127 ASIK 130
>gi|16329280|ref|NP_440008.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|383321020|ref|YP_005381873.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324190|ref|YP_005385043.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490074|ref|YP_005407750.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435340|ref|YP_005650064.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|451813439|ref|YP_007449891.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|131173|sp|P19569.2|PSAD_SYNY3 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|154481|gb|AAA88625.1| photosystem I subunit II [Synechocystis sp.]
gi|1651760|dbj|BAA16688.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|339272372|dbj|BAK48859.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|359270339|dbj|BAL27858.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273510|dbj|BAL31028.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276680|dbj|BAL34197.1| photosystem I subunit II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957150|dbj|BAM50390.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
gi|451779408|gb|AGF50377.1| photosystem I subunit II [Synechocystis sp. PCC 6803]
Length = 141
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 68
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GR+ G R IG+N P
Sbjct: 69 GTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEP 128
Query: 197 I 197
+
Sbjct: 129 V 129
>gi|113477249|ref|YP_723310.1| photosystem I protein PsaD [Trichodesmium erythraeum IMS101]
gi|110168297|gb|ABG52837.1| photosystem I protein PsaD [Trichodesmium erythraeum IMS101]
Length = 142
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL KA+VEE Y ITW S KEQ+FEMPTGGAAIM QG NLL LARKEQCLAL
Sbjct: 10 PIFGGSTGGLLTKAEVEEKYAITWTSSKEQVFEMPTGGAAIMNQGENLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K ++ YRVFP+G +YLHPKDGV+PEKVN GR G R+IG N P
Sbjct: 70 GTQLRTKFKPKIDNFKIYRVFPDGSNEYLHPKDGVFPEKVNEGRPYAGKINRNIGSNPEP 129
>gi|428320585|ref|YP_007118467.1| photosystem I protein PsaD [Oscillatoria nigro-viridis PCC 7112]
gi|428244265|gb|AFZ10051.1| photosystem I protein PsaD [Oscillatoria nigro-viridis PCC 7112]
Length = 154
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 100/128 (78%), Gaps = 2/128 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P+FGGSTGGLL KA VEE Y ITW SPKEQ+FEMP+GGAAIMRQG NLL L RKEQC+AL
Sbjct: 23 PLFGGSTGGLLTKALVEEKYAITWTSPKEQVFEMPSGGAAIMRQGDNLLHLPRKEQCIAL 82
Query: 140 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
G +LR+K+KI Y+ YRVFP+G +YLHPKDGV+PEKVN GR G R+IG N +PI
Sbjct: 83 GGQQLRAKFKITNYKIYRVFPDGSTEYLHPKDGVFPEKVNEGRPYNGKIDRNIGSNPNPI 142
Query: 198 EHKTELKK 205
+ K KK
Sbjct: 143 KVKFTGKK 150
>gi|215400814|ref|YP_002327575.1| PSI reaction center subunit II [Vaucheria litorea]
gi|194441264|gb|ACF70992.1| PSI reaction center subunit II [Vaucheria litorea]
Length = 139
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGG LR A+VEE Y ITW S KEQ FEMPTGGAA+M NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGWLRAAEVEEKYAITWTSSKEQTFEMPTGGAAVMLNDQNLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
GT+L+ K+KI Y+ YR+FPNGEVQ+LHPKDGV+PEKVN GR VG SIGKN +PI
Sbjct: 70 GTQLK-KFKINDYKIYRIFPNGEVQFLHPKDGVFPEKVNVGRLAVGSRNFSIGKNPNPIS 128
Query: 199 HK 200
K
Sbjct: 129 VK 130
>gi|226392|prf||1510177A photosystem II
Length = 146
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGG+TGGLL+ AQ EE Y ITW S KEQ+FE+PTGGAA+M +GPNLL ARKEQ LA
Sbjct: 9 TPVFGGTTGGLLKSAQTEEKYAITWTSTKEQVFELPTGGAAVMHEGPNLLYFARKEQALA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT +R+K+K K Y+ YRVFP G+VQYLHPKDGV+PEKVN GR G R IG+N +
Sbjct: 69 LGTHVRTKFKPKIQSYKIYRVFPGGDVQYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|425438305|ref|ZP_18818710.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9432]
gi|425439799|ref|ZP_18820114.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9717]
gi|440756109|ref|ZP_20935310.1| photosystem I reaction center subunit II [Microcystis aeruginosa
TAIHU98]
gi|389676559|emb|CCH94447.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9432]
gi|389719884|emb|CCH96336.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9717]
gi|440173331|gb|ELP52789.1| photosystem I reaction center subunit II [Microcystis aeruginosa
TAIHU98]
Length = 141
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKEQ LA
Sbjct: 8 APKFGGSTGGLLAKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEQALA 67
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+ R+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GR+ G R+IGKN
Sbjct: 68 LGTQFRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 196 P 196
P
Sbjct: 128 P 128
>gi|334118401|ref|ZP_08492490.1| photosystem I protein PsaD [Microcoleus vaginatus FGP-2]
gi|333459408|gb|EGK88021.1| photosystem I protein PsaD [Microcoleus vaginatus FGP-2]
Length = 141
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAAIMRQG NLL L RKEQC+AL
Sbjct: 10 PIFGGSTGGLLTKALVEEKYAITWTSPKEQVFEMPTGGAAIMRQGDNLLYLPRKEQCIAL 69
Query: 140 -GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
G +LR+K+KI Y+ YRVFP+G +YLHPKDGV+PEKVN GR G R+IG N +P
Sbjct: 70 GGQQLRAKFKITNYKIYRVFPDGNTEYLHPKDGVFPEKVNEGRPYNGKIERNIGSNPNPA 129
Query: 198 EHKTELKK 205
K KK
Sbjct: 130 TLKFTGKK 137
>gi|166365071|ref|YP_001657344.1| photosystem I subunit II [Microcystis aeruginosa NIES-843]
gi|425465442|ref|ZP_18844751.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9809]
gi|166087444|dbj|BAG02152.1| photosystem I subunit II [Microcystis aeruginosa NIES-843]
gi|389832318|emb|CCI24167.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9809]
Length = 141
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKE LA
Sbjct: 8 APKFGGSTGGLLTKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEHALA 67
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GR+ G R+IGKN
Sbjct: 68 LGTQLRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 196 P 196
P
Sbjct: 128 P 128
>gi|428772944|ref|YP_007164732.1| photosystem I protein PsaD [Cyanobacterium stanieri PCC 7202]
gi|428687223|gb|AFZ47083.1| photosystem I protein PsaD [Cyanobacterium stanieri PCC 7202]
Length = 144
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL A EE Y ITW S KEQ+FEMPTGGAAIM +G NL ARKEQCLAL
Sbjct: 12 PKFGGSTGGLLSAADREEKYAITWTSSKEQVFEMPTGGAAIMNEGENLYYFARKEQCLAL 71
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YRV+PNGEVQYLHP DGV+PEKVN GR+ G R+IG+N P
Sbjct: 72 GTQLRTKFKPKMEDYKIYRVYPNGEVQYLHPADGVFPEKVNEGREFHGKKDRNIGRNPEP 131
Query: 197 I 197
+
Sbjct: 132 V 132
>gi|67922724|ref|ZP_00516227.1| Photosystem I protein PsaD [Crocosphaera watsonii WH 8501]
gi|67855434|gb|EAM50690.1| Photosystem I protein PsaD [Crocosphaera watsonii WH 8501]
Length = 142
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA+ EE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKKEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YRV+P+GE+QYLHP DGV+PEKVN GR+ G R IG N P
Sbjct: 70 GTQLRTKFKPRIQDYKIYRVYPSGEIQYLHPADGVFPEKVNEGREYNGKIDRKIGDNPEP 129
Query: 197 I 197
+
Sbjct: 130 V 130
>gi|443326302|ref|ZP_21054961.1| PsaD [Xenococcus sp. PCC 7305]
gi|442794101|gb|ELS03529.1| PsaD [Xenococcus sp. PCC 7305]
Length = 142
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL A+VEE Y ITW S KEQ+FEMPTGGAAIM G NLL LARKEQCLAL
Sbjct: 10 PKFGGSTGGLLTAAEVEEKYAITWTSSKEQVFEMPTGGAAIMNSGENLLYLARKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YRVFPNGE +YLHP DGV+PEKVN GR G R IG N P
Sbjct: 70 GTQLRTKFKPRIQDYKVYRVFPNGETEYLHPADGVFPEKVNEGRPFAGKIDRKIGDNPEP 129
>gi|443312901|ref|ZP_21042515.1| PsaD [Synechocystis sp. PCC 7509]
gi|442777051|gb|ELR87330.1| PsaD [Synechocystis sp. PCC 7509]
Length = 154
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 97/117 (82%), Gaps = 2/117 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA EE Y ITW SPKEQ+FEMPTGG+AIMRQG NLL LARKE +A
Sbjct: 9 TPIFGGSTGGLLTKADREEKYAITWTSPKEQVFEMPTGGSAIMRQGKNLLYLARKEYGIA 68
Query: 139 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKN 193
+ G +LR+K+KI Y+ YR++P+GEV+YLHPKDGV+PEKVNPGR+ V R+IG+N
Sbjct: 69 IGGQQLRTKFKITDYKIYRIYPSGEVEYLHPKDGVFPEKVNPGREKVRYVDRNIGRN 125
>gi|390440137|ref|ZP_10228488.1| Photosystem I reaction center subunit II [Microcystis sp. T1-4]
gi|422303617|ref|ZP_16390968.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9806]
gi|425446474|ref|ZP_18826477.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9443]
gi|425452588|ref|ZP_18832405.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 7941]
gi|425456975|ref|ZP_18836681.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9807]
gi|425462986|ref|ZP_18842449.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9808]
gi|425469696|ref|ZP_18848611.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9701]
gi|443646811|ref|ZP_21129489.1| photosystem I reaction center subunit II [Microcystis aeruginosa
DIANCHI905]
gi|159027390|emb|CAO86874.1| psaD [Microcystis aeruginosa PCC 7806]
gi|389733278|emb|CCI02930.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9443]
gi|389765557|emb|CCI08583.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 7941]
gi|389791373|emb|CCI12799.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9806]
gi|389801795|emb|CCI19084.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9807]
gi|389823827|emb|CCI27714.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9808]
gi|389836421|emb|CCI32613.1| Photosystem I reaction center subunit II [Microcystis sp. T1-4]
gi|389880435|emb|CCI38817.1| Photosystem I reaction center subunit II [Microcystis aeruginosa
PCC 9701]
gi|443335640|gb|ELS50104.1| photosystem I reaction center subunit II [Microcystis aeruginosa
DIANCHI905]
Length = 141
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KA +EE Y ITW S KEQ+FEMPTGGAAIM +G NLL LARKE LA
Sbjct: 8 APKFGGSTGGLLAKADLEEKYAITWTSSKEQVFEMPTGGAAIMNEGENLLYLARKEHALA 67
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+ R+K+K K Y+ YR++P+GEVQYLHP DGV+PEKVN GR+ G R+IGKN
Sbjct: 68 LGTQFRTKFKPKIEDYKIYRIYPSGEVQYLHPADGVFPEKVNAGREFFGKKDRNIGKNPE 127
Query: 196 P 196
P
Sbjct: 128 P 128
>gi|81299811|ref|YP_400019.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 7942]
gi|81168692|gb|ABB57032.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 7942]
Length = 142
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K Y+ YRVFP G+V+YLHPKDGV+PEKVN GR G R IG+N +
Sbjct: 69 LGTQLRTKFKPKIESYKIYRVFPGGDVEYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|428222086|ref|YP_007106256.1| PsaD [Synechococcus sp. PCC 7502]
gi|427995426|gb|AFY74121.1| PsaD [Synechococcus sp. PCC 7502]
Length = 154
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 103/141 (73%), Gaps = 4/141 (2%)
Query: 61 TKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI 120
+E P FTP + P+ +PI+GGSTGGLL A +EE Y+ITW SPKEQ+FE+PTGGAAI
Sbjct: 8 VQETPATFTPGK--PSGKTPIWGGSTGGLLSAAYLEEKYLITWNSPKEQVFELPTGGAAI 65
Query: 121 MRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPG 179
M QG N L LA+KEQ LALGT+LR K+KI Y+ +R FPNG+ YLHPKDGV+PEKVN G
Sbjct: 66 MNQGDNALYLAKKEQALALGTQLR-KFKINNYKVWREFPNGDQVYLHPKDGVFPEKVNAG 124
Query: 180 RQGVGVNYRSIGKNVSPIEHK 200
R V R IG N +PI K
Sbjct: 125 RVAVNSVSRKIGDNPNPISVK 145
>gi|218245261|ref|YP_002370632.1| photosystem I protein PsaD [Cyanothece sp. PCC 8801]
gi|257058294|ref|YP_003136182.1| photosystem I protein PsaD [Cyanothece sp. PCC 8802]
gi|218165739|gb|ACK64476.1| photosystem I protein PsaD [Cyanothece sp. PCC 8801]
gi|256588460|gb|ACU99346.1| photosystem I protein PsaD [Cyanothece sp. PCC 8802]
Length = 142
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
SP FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM +G NLL LARKEQCLA
Sbjct: 9 SPKFGGSTGGLLSKADREEKYAITWTSTTEQVFEMPTGGAAIMNKGENLLYLARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K Y+ YR++P+GE QYLHP DGV+PEKVN GR+ G R IG N
Sbjct: 69 LGTQLRTKFKPKIQDYKIYRIYPSGETQYLHPADGVFPEKVNEGREFNGKKDRKIGDNPE 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|218441455|ref|YP_002379784.1| photosystem I protein PsaD [Cyanothece sp. PCC 7424]
gi|218174183|gb|ACK72916.1| photosystem I protein PsaD [Cyanothece sp. PCC 7424]
Length = 141
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 96/129 (74%), Gaps = 3/129 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA++EE Y ITW SPKEQ+FEMPTGGAAIM +G N+L L+RKEQCLAL
Sbjct: 9 PKFGGSTGGLLSKAKLEEKYAITWTSPKEQVFEMPTGGAAIMNEGDNILYLSRKEQCLAL 68
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
G + R+++K K ++ YR+FPNGEV+YLHP DGV+PEKVN GR G R IG N P
Sbjct: 69 GGQFRTQFKPKIENFKIYRIFPNGEVEYLHPADGVFPEKVNEGRSYFGKKDRKIGNNPEP 128
Query: 197 IEHKTELKK 205
K KK
Sbjct: 129 ATLKFSGKK 137
>gi|162459212|ref|NP_001104945.1| photosystem I subunit d1 [Zea mays]
gi|7677044|gb|AAF67002.1|AF147726_1 ferredoxin-binding subunit [Zea mays]
Length = 108
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/88 (84%), Positives = 81/88 (92%)
Query: 113 MPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVY 172
+ +AIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVY
Sbjct: 13 VAAAASAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVY 72
Query: 173 PEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
PEKVNPGR+GVG N+RSIGKNV+PI+ K
Sbjct: 73 PEKVNPGREGVGQNFRSIGKNVNPIDVK 100
>gi|434384483|ref|YP_007095094.1| PsaD [Chamaesiphon minutus PCC 6605]
gi|428015473|gb|AFY91567.1| PsaD [Chamaesiphon minutus PCC 6605]
Length = 138
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 91/119 (76%), Gaps = 2/119 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAA M G NLL ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLSKADVEEKYAITWNSPKEQVFEMPTGGAATMVSGDNLLNFARKEQCLA 68
Query: 139 LGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG +LR KYKI Y+ YR+ P GE+ LHPKDGV+PEKVN GR+ G R+IG N +P
Sbjct: 69 LGGQLR-KYKINNYKVYRILPKGEITLLHPKDGVFPEKVNAGREFNGKVDRNIGSNPNP 126
>gi|30468164|ref|NP_849051.1| photosystem I subunit II [Cyanidioschyzon merolae strain 10D]
gi|30409264|dbj|BAC76213.1| photosystem I p700 chlorophyll A apoprotein A2 (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 139
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ PSP F GSTGG LR A+ EE Y +TW S ++ IFEMPTGGAA+M G NLL LAR
Sbjct: 2 LNLKMPSPSFLGSTGGWLRCAETEEKYAMTWSSDQQHIFEMPTGGAAVMNSGDNLLYLAR 61
Query: 133 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQ LAL T+LR+++KI+ Y+ YR+FP+GEVQYLHPKDGV P +VN GR+ VG +IG
Sbjct: 62 KEQALALATQLRTQFKIQDYKIYRIFPSGEVQYLHPKDGVLPYQVNKGREQVGRVKSTIG 121
Query: 192 KNVSPIEHKTELKKFHKR 209
KNV+P + K K + R
Sbjct: 122 KNVNPAQVKFTSKATYDR 139
>gi|269101090|ref|YP_003289238.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
gi|266631598|emb|CAV31269.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
gi|270118728|emb|CAT18808.1| Photosystem I reaction center subunit II [Ectocarpus siliculosus]
Length = 132
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 97/129 (75%), Gaps = 2/129 (1%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L P+ PIFGGSTGG LR A+ EE YVITW SPKEQ+FEMPT G A+M G NLL LAR
Sbjct: 3 LYPSQFMPIFGGSTGGWLRSAEFEEKYVITWNSPKEQLFEMPTAGTALMLLGQNLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLALGT+LR K+KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG SIG
Sbjct: 63 KEQCLALGTQLR-KFKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRVPVGKRDFSIG 121
Query: 192 KNVSPIEHK 200
KN +P K
Sbjct: 122 KNPNPASIK 130
>gi|428771597|ref|YP_007163387.1| photosystem I protein PsaD [Cyanobacterium aponinum PCC 10605]
gi|428685876|gb|AFZ55343.1| photosystem I protein PsaD [Cyanobacterium aponinum PCC 10605]
Length = 144
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL A EE Y ITW S EQ+FEMPTGGAAIM +G NLL ARKEQCLAL
Sbjct: 12 PKFGGSTGGLLSAADREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYFARKEQCLAL 71
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YR++P GE QYLHP DGV+PEKVN GR+ G R+IGKN P
Sbjct: 72 GTQLRTKFKPKIEDYKIYRIYPTGETQYLHPADGVFPEKVNEGREFHGKKDRNIGKNPEP 131
Query: 197 I 197
+
Sbjct: 132 V 132
>gi|354553051|ref|ZP_08972358.1| photosystem I protein PsaD [Cyanothece sp. ATCC 51472]
gi|353554881|gb|EHC24270.1| photosystem I protein PsaD [Cyanothece sp. ATCC 51472]
Length = 142
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 93/121 (76%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM +G NLL L+RKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYLSRKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR G R IG N P
Sbjct: 70 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRDYNGKIDRKIGDNPEP 129
Query: 197 I 197
+
Sbjct: 130 V 130
>gi|1916314|gb|AAB51150.1| subunit II of photosystem I [Picea abies]
Length = 102
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 178
AIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP
Sbjct: 1 AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNP 60
Query: 179 GRQGVGVNYRSIGKNVSPIEHK 200
GR+GVGVN RSIGKNV PI+ K
Sbjct: 61 GRKGVGVNLRSIGKNVDPIQVK 82
>gi|126654797|ref|ZP_01726331.1| photosystem I subunit II [Cyanothece sp. CCY0110]
gi|126623532|gb|EAZ94236.1| photosystem I subunit II [Cyanothece sp. CCY0110]
Length = 142
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM G NLL L+RKEQCLAL
Sbjct: 10 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNAGENLLYLSRKEQCLAL 69
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR G R IG N P
Sbjct: 70 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRGYYGKKDRKIGDNPEP 129
Query: 197 I 197
+
Sbjct: 130 V 130
>gi|172036256|ref|YP_001802757.1| photosystem I reaction center subunit II [Cyanothece sp. ATCC
51142]
gi|171697710|gb|ACB50691.1| photosystem I reaction center subunit II [Cyanothece sp. ATCC
51142]
Length = 158
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA+ EE Y ITW S EQ+FEMPTGGAAIM +G NLL L+RKEQCLAL
Sbjct: 26 PKFGGSTGGLLSKAEREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYLSRKEQCLAL 85
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K K Y+ YR++P+GE+QYLHP DGV+PEKVN GR G R IG N P
Sbjct: 86 GTQLRTKFKPKIQDYKIYRIYPSGEIQYLHPADGVFPEKVNEGRDYNGKIDRKIGDNPEP 145
Query: 197 IEHK 200
+ K
Sbjct: 146 VTLK 149
>gi|428774717|ref|YP_007166504.1| photosystem I protein PsaD [Halothece sp. PCC 7418]
gi|428688996|gb|AFZ42290.1| photosystem I protein PsaD [Halothece sp. PCC 7418]
Length = 142
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL A+ EE Y ITW S +EQ+FEMPTGGAAIMR+G N+ ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTAAETEEKYGITWTSSQEQVFEMPTGGAAIMREGENVFYFARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PE VN GR +G R IG N
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIYPNGELEYLHPKDGVFPENVNEGRPYMGKIDRKIGANPD 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|428781645|ref|YP_007173431.1| PsaD [Dactylococcopsis salina PCC 8305]
gi|428695924|gb|AFZ52074.1| PsaD [Dactylococcopsis salina PCC 8305]
Length = 142
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL A+ EE Y ITW S +EQ+FEMPTGGAAIMR+G N+ ARKEQCLA
Sbjct: 9 TPIFGGSTGGLLTAAETEEKYGITWTSSQEQVFEMPTGGAAIMREGENVFYFARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K ++ YR++PNGE++YLHPKDGV+PE VN GR +G R IG N
Sbjct: 69 LGTQLRTKFKPKIEDFKIYRIYPNGELEYLHPKDGVFPENVNEGRPYMGKIDRKIGSNPD 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|220909607|ref|YP_002484918.1| photosystem I protein PsaD [Cyanothece sp. PCC 7425]
gi|219866218|gb|ACL46557.1| photosystem I protein PsaD [Cyanothece sp. PCC 7425]
Length = 140
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P+FGGSTGGLL KA EE Y ITW SP EQ+FEMPTGGAA+MRQG NLL LARKEQC+AL
Sbjct: 10 PLFGGSTGGLLSKATTEEKYAITWTSPVEQVFEMPTGGAAVMRQGDNLLYLARKEQCIAL 69
Query: 140 -GTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
G +LR K Y+ YRVF +GE LHPKDGV+PEKVN GR+ V R+IG+N +P +
Sbjct: 70 GGQQLRPKKITNYKIYRVFADGETVLLHPKDGVFPEKVNAGREAVNSVPRAIGENPNPSQ 129
Query: 199 HKTELKKFHK 208
K KK +
Sbjct: 130 IKFSGKKTYD 139
>gi|254422137|ref|ZP_05035855.1| photosystem I reaction center subunit II [Synechococcus sp. PCC
7335]
gi|196189626|gb|EDX84590.1| photosystem I reaction center subunit II [Synechococcus sp. PCC
7335]
Length = 155
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P FGGSTGGLL A VEE Y ITW S KEQ+FEMPTGGAA M +G NLL+LARKEQCLAL
Sbjct: 8 PKFGGSTGGLLTAAFVEERYAITWTSSKEQVFEMPTGGAATMNEGENLLELARKEQCLAL 67
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
G +LR+K+K K Y+ YR+FPNGE ++HP DGV+PEKVN GR G R IG+N +P
Sbjct: 68 GAQLRTKFKPKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGRGYSGKKDRRIGENPNP 127
>gi|456062032|ref|YP_007476277.1| photosystem I reaction center subunit II (ferredoxin-binding)
(chloroplast) [Pavlova lutheri]
gi|449327219|gb|AGE93775.1| photosystem I reaction center subunit II (ferredoxin-binding)
(chloroplast) [Pavlova lutheri]
Length = 147
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
D + SP FGG TGG L + EE Y +TW E+IFEMPTGGAAIM++G NL+ AR
Sbjct: 5 FDWSATSPTFGGGTGGWLTAGETEEKYAMTWTGKDEKIFEMPTGGAAIMKKGENLIYFAR 64
Query: 133 KEQCLALGTRLRSKYK-IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLAL ++LR+K+K I Y+ YRVF GE+Q+LHPKDG +PEKVN GR GV SIG
Sbjct: 65 KEQCLALSSQLRTKFKVIDYKIYRVFGTGEIQHLHPKDGTFPEKVNEGRIGVNNVNHSIG 124
Query: 192 KNVSPIEHKTELKKF 206
KN+ P + K K F
Sbjct: 125 KNLEPAKIKYSTKDF 139
>gi|11465402|ref|NP_045207.1| photosystem I subunit II [Cyanidium caldarium]
gi|14195056|sp|Q9TLR2.1|PSAD_CYACA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|6466305|gb|AAF12887.1|AF022186_9 unknown [Cyanidium caldarium]
Length = 140
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 5/134 (3%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+
Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAK 64
Query: 133 KEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLALG +L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G +IG
Sbjct: 65 KEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIG 124
Query: 192 KNVSPIE----HKT 201
KN++P E HKT
Sbjct: 125 KNLNPAEVKFTHKT 138
>gi|428215762|ref|YP_007088906.1| PsaD [Oscillatoria acuminata PCC 6304]
gi|428004143|gb|AFY84986.1| PsaD [Oscillatoria acuminata PCC 6304]
Length = 142
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 3/130 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL KA VEE Y ITW S KEQ+FEMP+GGAA+M G NLL L RKE CLA
Sbjct: 9 APKFGGSTGGLLSKALVEEKYAITWTSSKEQVFEMPSGGAAVMNAGENLLYLPRKEHCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+ R+K+K K Y+ YRV+ +GE +YLHPKDGV+PEKVN GR G N R IG N
Sbjct: 69 LGTQFRTKFKPKIEDYKIYRVYASGETEYLHPKDGVFPEKVNEGRAYYGKNDRKIGDNPQ 128
Query: 196 PIEHKTELKK 205
P + K KK
Sbjct: 129 PAKIKFSGKK 138
>gi|158338248|ref|YP_001519425.1| photosystem I protein PsaD [Acaryochloris marina MBIC11017]
gi|158308489|gb|ABW30106.1| photosystem I protein PsaD [Acaryochloris marina MBIC11017]
Length = 139
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL A+ EE Y ITW SPK+Q+FEMPTGGAA+M +G NLL LARKEQCLA
Sbjct: 9 TPLFGGSTGGLLSSAETEEKYAITWTSPKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 139 LGTR-LRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG R LR+K + Y+ YRV P+G LHPKDGV+PEK N GR V RSIG+N +P
Sbjct: 69 LGLRQLRTKKIMDYKIYRVLPDGSNTLLHPKDGVFPEKSNEGRAAVNSVARSIGENPNPG 128
Query: 198 EHKTELKKFH 207
K KK +
Sbjct: 129 AIKYTGKKAY 138
>gi|359457484|ref|ZP_09246047.1| photosystem I protein PsaD [Acaryochloris sp. CCMEE 5410]
Length = 139
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL A+ EE Y ITW SPK+Q+FEMPTGGAA+M +G NLL LARKEQCLA
Sbjct: 9 TPLFGGSTGGLLSSAETEEKYAITWTSPKQQVFEMPTGGAAVMNEGENLLYLARKEQCLA 68
Query: 139 LGTR-LRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG R LR+K + Y+ YRV P+G LHPKDGV+PEK N GR V RSIG+N +P
Sbjct: 69 LGLRQLRTKKIMDYKIYRVLPDGSNTLLHPKDGVFPEKSNEGRTAVNSVARSIGENPNP 127
>gi|317968791|ref|ZP_07970181.1| photosystem I protein PsaD [Synechococcus sp. CB0205]
Length = 140
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 93/120 (77%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S KEQ+FE+PTGGAA M +G NL+ ARKEQCLAL
Sbjct: 8 PKYIGSTGGLLNAAETEEKYAITWTSAKEQVFELPTGGAAHMNEGENLMYFARKEQCLAL 67
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GRQ VG N R IG+N +P
Sbjct: 68 GTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRQMVGHNARRIGQNGNP 127
>gi|427712818|ref|YP_007061442.1| PsaD [Synechococcus sp. PCC 6312]
gi|427376947|gb|AFY60899.1| PsaD [Synechococcus sp. PCC 6312]
Length = 140
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P++ GSTGGLL KA+VEE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ LARKEQCLAL
Sbjct: 10 PLYAGSTGGLLTKAEVEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYLARKEQCLAL 69
Query: 140 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
+LR + YQ YR+FP+GE LHPKDGV+PEKVN GR+ V RSIG+N SP
Sbjct: 70 AAQQLRPRKINNYQIYRIFPDGESVLLHPKDGVFPEKVNAGREAVNSVPRSIGENPSP 127
>gi|60416407|sp|P23076.3|PSAD_SYNP6 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
Length = 142
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+LR+K+K K Y+ YR FP +V YLHPKDGV+PEKVN GR G R IG+N +
Sbjct: 69 LGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPN 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|376403682|ref|YP_005090043.1| psaD gene product (chloroplast) [Fucus vesiculosus]
gi|269991245|emb|CAX12423.1| photosystem I ferredoxin-binding protein [Fucus vesiculosus]
Length = 132
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 75 PNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKE 134
P+ PIFGGSTGG LR A+ EE YVITW S KEQ+FEMPT G A+M G NLL LARKE
Sbjct: 5 PSKYMPIFGGSTGGWLRSAEFEEKYVITWNSEKEQLFEMPTAGTALMLLGQNLLYLARKE 64
Query: 135 QCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKN 193
QCLALGT+LR K KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG SIGKN
Sbjct: 65 QCLALGTQLR-KLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKN 123
Query: 194 VSP 196
+P
Sbjct: 124 PNP 126
>gi|440683479|ref|YP_007158274.1| photosystem I protein PsaD [Anabaena cylindrica PCC 7122]
gi|428680598|gb|AFZ59364.1| photosystem I protein PsaD [Anabaena cylindrica PCC 7122]
Length = 139
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+KA+VEE Y ITW SPK Q+FEMPTGGAA M QG NLL LARKE +A
Sbjct: 9 TPLFGGSTGGLLKKAEVEEKYAITWTSPKAQVFEMPTGGAATMNQGENLLYLARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGR V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNPGRDKVRHVPRRIGQNPSPA 127
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 128 QLKFSGKATH 137
>gi|403066538|ref|YP_006639027.1| photosystem I ferredoxin-binding protein (chloroplast) [Saccharina
japonica]
gi|378787451|gb|AFC40081.1| photosystem I ferredoxin-binding protein (chloroplast) [Saccharina
japonica]
Length = 132
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 132
L P+ P+FGGSTGG LR A+ EE YVITW S EQ+FEMPT G A+M G NLL LAR
Sbjct: 3 LYPSKYMPVFGGSTGGWLRSAEYEEKYVITWNSTTEQLFEMPTAGTALMLLGQNLLYLAR 62
Query: 133 KEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIG 191
KEQCLALGT+LR K KIK Y+ YR+FP GE+Q+LHPKDGV+PE N GR VG SIG
Sbjct: 63 KEQCLALGTQLR-KLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIG 121
Query: 192 KNVSPIEHK 200
KN +P K
Sbjct: 122 KNPNPASIK 130
>gi|116075792|ref|ZP_01473051.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9916]
gi|116067107|gb|EAU72862.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9916]
Length = 143
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 92/128 (71%), Gaps = 3/128 (2%)
Query: 76 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQ 135
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M QG N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNAAETEEKYAITWTSSSAQAFELPTGGAAMMSQGENIMYFARKEQ 66
Query: 136 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
CLALGT+LR+K+K + Y+ YR+FP G+ ++LHP DGV+PEKVN GRQ VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPSDGVFPEKVNEGRQMVGHNPRRIGE 126
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 127 NTNPANIK 134
>gi|5052771|gb|AAD38699.1|AF148503_2 photosystem I accessory protein D [Nostoc sp. PCC 8009]
Length = 139
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M QG NLL LARKEQ +A
Sbjct: 9 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPA 127
Query: 198 EHK 200
+ K
Sbjct: 128 QLK 130
>gi|3914450|sp|P56596.1|PSAD_NOSS8 RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
Length = 138
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M QG NLL LARKEQ +A
Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIA 67
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R IG+N SP
Sbjct: 68 LGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPA 126
Query: 198 EHK 200
+ K
Sbjct: 127 QLK 129
>gi|298492127|ref|YP_003722304.1| photosystem I protein PsaD ['Nostoc azollae' 0708]
gi|298234045|gb|ADI65181.1| photosystem I protein PsaD ['Nostoc azollae' 0708]
Length = 138
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA M +G NLL LARKE +A
Sbjct: 8 TPLFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAARMLKGENLLYLARKEYSIA 67
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR V R IG+N SP
Sbjct: 68 LGAQLR-KFKITDYKIYRILPSGETSFIHPTDGVFPEKVNAGRDKVRHVPRRIGQNPSPA 126
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 127 QLKFSGKATH 136
>gi|443475514|ref|ZP_21065461.1| photosystem I protein PsaD [Pseudanabaena biceps PCC 7429]
gi|443019633|gb|ELS33694.1| photosystem I protein PsaD [Pseudanabaena biceps PCC 7429]
Length = 147
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
Query: 75 PNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKE 134
P +PI+GGSTGGLL A EE Y+I+W+SPKEQ+FEMPTGGAA M +G NLL LA+KE
Sbjct: 13 PKGKTPIWGGSTGGLLNAAFTEEKYLISWDSPKEQVFEMPTGGAATMVKGDNLLYLAKKE 72
Query: 135 QCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKN 193
Q LALGT+LR K+KI Y+ +R FPNG+ YLHP DGV+PEKVN GR R IG N
Sbjct: 73 QALALGTQLR-KFKITNYKIWREFPNGDQVYLHPSDGVFPEKVNAGRVAANSVSRKIGDN 131
Query: 194 VSPIEHK 200
+P+ K
Sbjct: 132 PNPVSVK 138
>gi|254431741|ref|ZP_05045444.1| photosystem I reaction center subunit II [Cyanobium sp. PCC 7001]
gi|197626194|gb|EDY38753.1| photosystem I reaction center subunit II [Cyanobium sp. PCC 7001]
Length = 143
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 91/124 (73%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M +G NL+ ARKEQCLAL
Sbjct: 11 PKYIGSTGGLLNAAETEEKYAITWTSSKAQAFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YR+FP G+ +YLHPKDGV+PEKVN GR VG N R+IG N +P
Sbjct: 71 GTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPIVGHNPRTIGANTNP 130
Query: 197 IEHK 200
K
Sbjct: 131 ANLK 134
>gi|88807860|ref|ZP_01123371.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 7805]
gi|88787899|gb|EAR19055.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 7805]
Length = 143
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 91/128 (71%), Gaps = 3/128 (2%)
Query: 76 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQ 135
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNSAETEEKYAITWTSNSSQAFELPTGGAAMMNAGENIMYFARKEQ 66
Query: 136 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
CLALGT+LR+K+K + Y+ YR+FP G+ +YLHP DGV+PEKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPSDGVFPEKVNEGRAMVGHNPRRIGQ 126
Query: 193 NVSPIEHK 200
N++P K
Sbjct: 127 NINPANIK 134
>gi|427736104|ref|YP_007055648.1| PsaD [Rivularia sp. PCC 7116]
gi|427371145|gb|AFY55101.1| PsaD [Rivularia sp. PCC 7116]
Length = 159
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+KA EE Y ITW SPK+Q+FEMPTGGAA M +G N+L++ARKE +A
Sbjct: 26 TPLFGGSTGGLLKKAVEEEKYAITWTSPKQQVFEMPTGGAATMLEGENMLEIARKEYGIA 85
Query: 139 LGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
LG + R Y+ YR++P+GE QYLHP DGV+PEKVN GR+ V N R IG N S +
Sbjct: 86 LGAQFRKMKITDYKIYRIYPSGETQYLHPADGVFPEKVNEGREKVRFNARKIGDNPSAAK 145
Query: 199 HK 200
K
Sbjct: 146 LK 147
>gi|22299267|ref|NP_682514.1| photosystem I subunit II [Thermosynechococcus elongatus BP-1]
gi|61230060|sp|P0A420.2|PSAD_THEEB RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|61230061|sp|P0A421.2|PSAD_SYNEN RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|61230062|sp|P0A422.2|PSAD_THEVL RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|47576|emb|CAA45306.1| photosystem I subunit II [Synechococcus sp.]
gi|1228070|dbj|BAA04174.1| PsaD [Thermosynechococcus vulcanus]
gi|22295450|dbj|BAC09276.1| photosystem I subunit II [Thermosynechococcus elongatus BP-1]
gi|1589256|prf||2210386A photosystem I reaction center:SUBUNIT=II
Length = 139
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL
Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLAL 68
Query: 140 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
+LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P +
Sbjct: 69 AAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQ 128
Query: 199 HKTELKK 205
K KK
Sbjct: 129 LKFTGKK 135
>gi|15825931|pdb|1JB0|D Chain D, Crystal Structure Of Photosystem I: A Photosynthetic
Reaction Center And Core Antenna System From
Cyanobacteria
gi|321159953|pdb|3PCQ|D Chain D, Femtosecond X-Ray Protein Nanocrystallography
gi|400977464|pdb|4FE1|D Chain D, Improving The Accuracy Of Macromolecular Structure
Refinement At 7 A Resolution
Length = 138
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL
Sbjct: 8 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLAL 67
Query: 140 GT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
+LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P +
Sbjct: 68 AAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQ 127
Query: 199 HKTELKK 205
K KK
Sbjct: 128 LKFTGKK 134
>gi|148238793|ref|YP_001224180.1| photosystem I reaction center subunit II [Synechococcus sp. WH
7803]
gi|147847332|emb|CAK22883.1| Photosystem I reaction center subunit II [Synechococcus sp. WH
7803]
Length = 143
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 90/128 (70%), Gaps = 3/128 (2%)
Query: 76 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQ 135
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNSAETEEKYAITWTSNSAQAFELPTGGAAMMNAGENIMYFARKEQ 66
Query: 136 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
CLALGT+LR+K+K + Y+ YR+FP G+ +YLHP DGV+PEKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEYLHPSDGVFPEKVNEGRAMVGHNPRRIGQ 126
Query: 193 NVSPIEHK 200
N +P K
Sbjct: 127 NTNPANIK 134
>gi|87300937|ref|ZP_01083779.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 5701]
gi|87284808|gb|EAQ76760.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 5701]
Length = 143
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 89/116 (76%), Gaps = 3/116 (2%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y ITW S K Q+FE+PTGGAA M +G N++ +RKEQCLALGT+L
Sbjct: 15 GSTGGLLNSAETEEKYAITWTSSKGQVFELPTGGAAEMNEGENIMYFSRKEQCLALGTQL 74
Query: 144 RSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R+K+K + Y+ YR+FP G+ +YLHPKDGV+PEKVN GR VG N RSIG+N P
Sbjct: 75 RTKFKPRIEDYKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPMVGHNPRSIGQNPDP 130
>gi|87124938|ref|ZP_01080785.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9917]
gi|86167258|gb|EAQ68518.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
RS9917]
Length = 138
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 76 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQ 135
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M +G NL+ ARKEQ
Sbjct: 2 NGQLPQFIGSTGGLLNAAETEEKYAITWTSASAQAFELPTGGAAMMHEGENLMYFARKEQ 61
Query: 136 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
CLALGT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GR VG N R IG
Sbjct: 62 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNDGRTMVGHNPRRIGA 121
Query: 193 NVSP 196
N P
Sbjct: 122 NPDP 125
>gi|434405066|ref|YP_007147951.1| PsaD [Cylindrospermum stagnale PCC 7417]
gi|428259321|gb|AFZ25271.1| PsaD [Cylindrospermum stagnale PCC 7417]
Length = 139
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P++GGSTGGLL KA+ EE Y ITW S KEQ+FE+PTGGAA MR+G NLL LARKEQ +A
Sbjct: 9 TPLYGGSTGGLLSKAEQEEKYAITWTSAKEQVFELPTGGAATMRKGENLLYLARKEQGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVNPGR V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPKGETTLIHPADGVFPEKVNPGRDKVRYVPRRIGQNPSPA 127
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 128 QLKFSGKATH 137
>gi|78780055|ref|YP_398167.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9312]
gi|78713554|gb|ABB50731.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9312]
Length = 140
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I W S KEQ FE+PTGGAAIM +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWNSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RS K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GR+ VG N R IG+N +P
Sbjct: 74 RSFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNP 128
>gi|282898005|ref|ZP_06306000.1| Photosystem I protein PsaD [Raphidiopsis brookii D9]
gi|282898735|ref|ZP_06306722.1| Photosystem I protein PsaD [Cylindrospermopsis raciborskii CS-505]
gi|281196262|gb|EFA71172.1| Photosystem I protein PsaD [Cylindrospermopsis raciborskii CS-505]
gi|281197149|gb|EFA72050.1| Photosystem I protein PsaD [Raphidiopsis brookii D9]
Length = 138
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR G NLL +ARKE +A
Sbjct: 8 TPLFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAATMRTGENLLYIARKEYGIA 67
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE +HP DGV+PEKVN GR+ V R IG+N S
Sbjct: 68 LGAQLR-KFKITDYKVYRILPSGETTLIHPADGVFPEKVNKGREMVRHVPRRIGENPSAA 126
Query: 198 EHKTELKKFH 207
K K H
Sbjct: 127 ALKFSGKATH 136
>gi|126697107|ref|YP_001091993.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9301]
gi|126544150|gb|ABO18392.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9301]
Length = 140
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GR+ VG N R IG+N +P
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNP 128
>gi|318042589|ref|ZP_07974545.1| photosystem I protein PsaD [Synechococcus sp. CB0101]
Length = 140
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M +G N++ ARKEQCLAL
Sbjct: 8 PKYIGSTGGLLNAAETEEKYAITWTSSKVQAFELPTGGAAHMNEGENIMYFARKEQCLAL 67
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YR+FP G+ ++LHPKDGV+PEKVN GR VG N R IG+N +P
Sbjct: 68 GTQLRTKFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRLMVGHNARRIGQNGNP 127
>gi|33863977|ref|NP_895537.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9313]
gi|33635561|emb|CAE21885.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9313]
Length = 142
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 92/123 (74%), Gaps = 2/123 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S Q+FE+PTGGAA M +G NL+ ARKEQCLAL
Sbjct: 11 PKYLGSTGGLLNSAETEEKYAITWSSSTAQVFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 140 GTRLRS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
GT+LR+ K KI+ Y+ YRVFP G+ ++LHPKDGV+PEKVN GR V +N R IG+N +P
Sbjct: 71 GTQLRTFKPKIEDYKIYRVFPGGDTEFLHPKDGVFPEKVNEGRVTVNLNNRRIGENANPA 130
Query: 198 EHK 200
+ K
Sbjct: 131 KLK 133
>gi|91070217|gb|ABE11137.1| photosystem I protein PsaD [uncultured Prochlorococcus marinus
clone HF10-11H11]
Length = 140
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSTKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GR+ VG N R IG+N +P
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNP 128
>gi|123966998|ref|YP_001012079.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9515]
gi|123201364|gb|ABM72972.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9515]
Length = 140
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I+W S KEQ FE+PTGGAA+M +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAISWNSSKEQAFELPTGGAAVMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHKT 201
R K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GR+ VG N R IG+N +P K
Sbjct: 74 RGFKPRIEAFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNPAGLKF 133
Query: 202 ELKK 205
KK
Sbjct: 134 TTKK 137
>gi|75910918|ref|YP_325214.1| photosystem I protein PsaD [Anabaena variabilis ATCC 29413]
gi|92090628|sp|P31089.3|PSAD_ANAVT RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|75704643|gb|ABA24319.1| Photosystem I protein PsaD [Anabaena variabilis ATCC 29413]
Length = 139
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M +G NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGR+ V N RSIG+N +P
Sbjct: 69 LGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPS 127
Query: 198 EHK 200
+ K
Sbjct: 128 QVK 130
>gi|194477072|ref|YP_002049251.1| Photosystem I reaction center subunit II (PsaD) [Paulinella
chromatophora]
gi|171192079|gb|ACB43041.1| Photosystem I reaction center subunit II (PsaD) [Paulinella
chromatophora]
Length = 141
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P F GSTGGLL A+ EE Y ITW S Q+FE+PTGGAA+M +G NL+ ARKEQCLAL
Sbjct: 9 PQFIGSTGGLLNSAETEEKYAITWTSASTQVFELPTGGAAMMNEGENLMYFARKEQCLAL 68
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + Y+ YRVFP G+ +++HP DGV+PEKVN GR V N R IG N +P
Sbjct: 69 GTQLRTKFKPRIENYKIYRVFPGGDAEFIHPSDGVFPEKVNEGRNMVNHNPRRIGTNPNP 128
>gi|124023964|ref|YP_001018271.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9303]
gi|123964250|gb|ABM79006.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9303]
Length = 142
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 91/123 (73%), Gaps = 2/123 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S Q FE+PTGGAA M +G NL+ ARKEQCLAL
Sbjct: 11 PKYLGSTGGLLNSAETEEKYAITWSSSTAQAFELPTGGAAEMNEGENLMYFARKEQCLAL 70
Query: 140 GTRLRS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
GT+LR+ K KI+ Y+ YRVFP G+ ++LHPKDGV+PEKVN GR V VN R IG+N +P
Sbjct: 71 GTQLRTFKPKIEDYKIYRVFPGGDTEFLHPKDGVFPEKVNEGRVMVNVNNRRIGENANPA 130
Query: 198 EHK 200
+ K
Sbjct: 131 KLK 133
>gi|427702932|ref|YP_007046154.1| PsaD [Cyanobium gracile PCC 6307]
gi|427346100|gb|AFY28813.1| PsaD [Cyanobium gracile PCC 6307]
Length = 143
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 91/128 (71%), Gaps = 3/128 (2%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA M +G NL+ ARKEQCLALGT+L
Sbjct: 15 GSTGGLLNSAETEEKYAITWSSTKAQAFELPTGGAAEMHEGDNLMYFARKEQCLALGTQL 74
Query: 144 RSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
R+K+K + Y+ YR++P G+ ++LHPKDGV+PEKVN GR VG RSIG N +P K
Sbjct: 75 RTKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFPEKVNEGRPMVGHTPRSIGANPNPASLK 134
Query: 201 TELKKFHK 208
K H+
Sbjct: 135 FSGKATHE 142
>gi|427717008|ref|YP_007065002.1| photosystem I protein PsaD [Calothrix sp. PCC 7507]
gi|427349444|gb|AFY32168.1| photosystem I protein PsaD [Calothrix sp. PCC 7507]
Length = 139
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA VEE Y ITW SPK+Q+FE+PTGGAA M QG NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAAVEEKYAITWTSPKQQVFELPTGGAATMLQGENLLYIARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE +HP DGV+PEKVNPGR+ V R IG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTLIHPADGVFPEKVNPGREKVRYVPRRIGQNPSPS 127
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 128 QVKFSGKATH 137
>gi|123969317|ref|YP_001010175.1| photosystem I protein PsaD [Prochlorococcus marinus str. AS9601]
gi|123199427|gb|ABM71068.1| Photosystem I protein PsaD [Prochlorococcus marinus str. AS9601]
Length = 140
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAA+M +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAALMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R+ K +I+ ++ YR+FP G++++LHPKDGV+PEKVN GR+ VG N R IG+N +P
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFPEKVNEGREKVGHNPRRIGENPNP 128
>gi|428305396|ref|YP_007142221.1| photosystem I protein PsaD [Crinalium epipsammum PCC 9333]
gi|428246931|gb|AFZ12711.1| photosystem I protein PsaD [Crinalium epipsammum PCC 9333]
Length = 154
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
F QL TP IFGG TGGLL KA+ EE Y ITW SPKEQ+FEMPTGG+AIM QG NL
Sbjct: 13 FMAEQLSGQTP--IFGGGTGGLLTKAETEEKYAITWTSPKEQVFEMPTGGSAIMNQGDNL 70
Query: 128 LKLARKEQCLAL-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGV 185
L LARKE C+AL G +LR+K+KI Y+ YRVFPNGE+ YLHPKDGV+PEKVN GR G
Sbjct: 71 LYLARKEYCIALGGQQLRAKFKINNYKIYRVFPNGEIVYLHPKDGVFPEKVNEGRVYAGK 130
Query: 186 NYRSIGKNVSPIEHK 200
R+IG N P + K
Sbjct: 131 KDRNIGSNPEPAKVK 145
>gi|33866576|ref|NP_898135.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 8102]
gi|33633354|emb|CAE08559.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
WH 8102]
Length = 143
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 76 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQ 135
N P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQ
Sbjct: 7 NGQLPQFIGSTGGLLNAAETEEKYAITWTSNSAQAFELPTGGAAMMNSGENIMYFARKEQ 66
Query: 136 CLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
CLALGT+LR+K+K + Y+ YR+FP G+ ++L+PKDGV EKVN GR VG N R IG+
Sbjct: 67 CLALGTQLRTKFKPRIEDYKIYRIFPGGDTEFLYPKDGVVSEKVNEGRTMVGHNSRRIGQ 126
Query: 193 NVSP 196
NV+P
Sbjct: 127 NVNP 130
>gi|86609695|ref|YP_478457.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558237|gb|ABD03194.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 141
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P+FGGSTGGLL A+ EE YVITW Q+FEMPTGGAA M +G N L ARKEQCLAL
Sbjct: 12 PLFGGSTGGLLSAAETEEKYVITWTGKPGQVFEMPTGGAAEMVEGKNFLTFARKEQCLAL 71
Query: 140 GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
G +LRS YKI YQ +R+ GE +HPKDGV+PEKVN GR+ VG R+IGKN PI
Sbjct: 72 GAQLRSDYKINDYQIFRIPAGGEPVLVHPKDGVFPEKVNEGREPVGKVDRNIGKNKEPIT 131
Query: 199 HK 200
+K
Sbjct: 132 YK 133
>gi|119513056|ref|ZP_01632112.1| photosystem I reaction center subunit II [Nodularia spumigena
CCY9414]
gi|119462298|gb|EAW43279.1| photosystem I reaction center subunit II [Nodularia spumigena
CCY9414]
Length = 139
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL KA+ EE Y ITW SPKEQ+FEMPTGG+A M +G NLL +ARKE +A
Sbjct: 9 TPLFGGSTGGLLTKAREEEKYAITWTSPKEQVFEMPTGGSATMLKGENLLYIARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V RSIG+N SP
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRHVPRSIGENPSPA 127
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 128 KLKFSGKATH 137
>gi|148243186|ref|YP_001228343.1| photosystem I reaction center subunit II [Synechococcus sp. RCC307]
gi|147851496|emb|CAK28990.1| Photosystem I reaction center subunit II [Synechococcus sp. RCC307]
Length = 144
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P F GSTGGLL A+ EE Y ITW S Q FE+PTGGAA+M G N++ ARKEQCLAL
Sbjct: 12 PQFIGSTGGLLNAAETEEKYAITWNSDSAQAFELPTGGAAMMNSGENIMYFARKEQCLAL 71
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+++K + Y+ YR++P G++++LHP DGV+PEKVN GR VG N R IG+N +P
Sbjct: 72 GTQLRTQFKPRIEDYKIYRIYPGGDMEFLHPADGVFPEKVNEGRPMVGHNPRRIGQNTNP 131
>gi|170077305|ref|YP_001733943.1| photosystem I subunit II [Synechococcus sp. PCC 7002]
gi|169884974|gb|ACA98687.1| photosystem I subunit II [Synechococcus sp. PCC 7002]
Length = 142
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NL+ ARKEQCLA
Sbjct: 9 TPKFGGSTGGLLAAAEREEKYAITWSSAKEQVFELPTGGAAVMNEGDNLMYFARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+L++++K K Y+ YRVFP+GE Q+L+P DGV EKVN GR+ G R+IG N
Sbjct: 69 LGTQLKTQFKPKITDYKIYRVFPSGETQFLYPLDGVPSEKVNEGREYKGKVDRNIGSNPE 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|260434254|ref|ZP_05788224.1| photosystem I reaction center subunit II [Synechococcus sp. WH
8109]
gi|260412128|gb|EEX05424.1| photosystem I reaction center subunit II [Synechococcus sp. WH
8109]
Length = 149
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 85 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLR 144
STGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G NL+ ARKEQCLALGT+LR
Sbjct: 22 STGGLLNSAETEEKYAITWTSKTEQAFELPTGGAALMNSGENLMYFARKEQCLALGTQLR 81
Query: 145 SKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
+K+K + Y+ YR++P G+ ++LHPKDGV+ EKVN GR VG N R IG+NV+P K
Sbjct: 82 TKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVGHNPRRIGQNVNPANIK 140
>gi|427727341|ref|YP_007073578.1| PsaD [Nostoc sp. PCC 7524]
gi|427363260|gb|AFY45981.1| PsaD [Nostoc sp. PCC 7524]
Length = 139
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA EE Y ITW SPK+Q+FE+PTGGAA M QG NLL LARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKQQVFELPTGGAATMLQGQNLLYLARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ PNGE ++HP DGV+PEKVN GR+ V RSIG+N +P
Sbjct: 69 LGGQLR-KFKITDYKIYRILPNGETTFIHPADGVFPEKVNAGREKVRHVPRSIGENPNPA 127
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 128 QLKFSGKATH 137
>gi|414076975|ref|YP_006996293.1| photosystem I protein PsaD [Anabaena sp. 90]
gi|413970391|gb|AFW94480.1| photosystem I protein PsaD [Anabaena sp. 90]
Length = 138
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL KA VEE Y ITW SPKEQ+FEMPTGGAA M +G NLL +ARKE +A
Sbjct: 8 TPIFGGSTGGLLTKADVEEKYAITWTSPKEQVFEMPTGGAAKMVKGENLLYIARKEYGIA 67
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GR V R IG+N +P
Sbjct: 68 LGAQLR-KFKITDYKVYRILPGGETTMIHPADGVFPEKVNAGRSMVRHVPRRIGQNPNPA 126
Query: 198 EHKTELKKFH 207
+ K K H
Sbjct: 127 QIKFSGKATH 136
>gi|157414183|ref|YP_001485049.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9215]
gi|254526492|ref|ZP_05138544.1| photosystem I reaction center subunit II [Prochlorococcus marinus
str. MIT 9202]
gi|157388758|gb|ABV51463.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9215]
gi|221537916|gb|EEE40369.1| photosystem I reaction center subunit II [Prochlorococcus marinus
str. MIT 9202]
Length = 140
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I W+S KEQ FE+PTGGAAIM +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAIVWKSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R+ K +I+ ++ YR+FP G++++LHPKDGV+ EKVN GR+ VG N R IG+N +P
Sbjct: 74 RAFKPRIEDFKIYRIFPGGDIEFLHPKDGVFSEKVNEGREKVGHNPRRIGENPNP 128
>gi|78211951|ref|YP_380730.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9605]
gi|78196410|gb|ABB34175.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9605]
Length = 143
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 85 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLR 144
STGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G NL+ ARKEQCLALGT+LR
Sbjct: 16 STGGLLNSAETEEKYAITWTSKTEQAFELPTGGAALMNSGENLMYFARKEQCLALGTQLR 75
Query: 145 SKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHK 200
+K+K + Y+ YR++P G+ ++LHPKDGV+ EKVN GR VG N R IG+NV+P K
Sbjct: 76 TKFKPRIEDYKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVGHNPRRIGQNVNPANIK 134
>gi|427418928|ref|ZP_18909111.1| PsaD protein [Leptolyngbya sp. PCC 7375]
gi|425761641|gb|EKV02494.1| PsaD protein [Leptolyngbya sp. PCC 7375]
Length = 142
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 85/121 (70%), Gaps = 3/121 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGGSTGGLL A+ EE YVITW S KEQ FEMPTGG AIM G N+L LARKEQCLA
Sbjct: 9 TPIFGGSTGGLLSAAEREEKYVITWSSKKEQPFEMPTGGVAIMNTGENMLYLARKEQCLA 68
Query: 139 LGTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
L +L++K+K Y+ YRV P GE YLHP DGV PEKVN GR G R+IG N
Sbjct: 69 LSRQLKTKFKPRITDYKIYRVLPTGETTYLHPADGVPPEKVNEGRGYSGKIDRNIGSNPD 128
Query: 196 P 196
P
Sbjct: 129 P 129
>gi|113953822|ref|YP_729691.1| photosystem I reaction center subunit II [Synechococcus sp. CC9311]
gi|113881173|gb|ABI46131.1| photosystem I reaction center subunit II [Synechococcus sp. CC9311]
Length = 143
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P + GSTGGLL A+ EE Y ITW S EQ FE+PTGGAA+M G N++ ARKEQCLAL
Sbjct: 11 PQYIGSTGGLLNSAETEEKYAITWTSKSEQAFELPTGGAAMMSSGENIMYFARKEQCLAL 70
Query: 140 GTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
GT+LR+K+K + ++ YR+FP G+ ++LHP DGV+PEKVN GR VG N R IG N +P
Sbjct: 71 GTQLRTKFKPRIEDFKIYRIFPGGDTEFLHPLDGVFPEKVNEGRPMVGHNPRRIGANTNP 130
Query: 197 IEHK 200
K
Sbjct: 131 ANIK 134
>gi|33862134|ref|NP_893695.1| photosystem I protein PsaD [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33634352|emb|CAE20037.1| Photosystem I protein PsaD [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 140
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 90/115 (78%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y I+W S KEQ FE+PTGGAAIM +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAISWNSSKEQAFELPTGGAAIMHEGDNLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R K +I+ ++ YR+FP G++++LHPKDGV+ EKVN GR+ VG N R IG+N +P
Sbjct: 74 RGFKPRIENFKIYRIFPGGDIEFLHPKDGVFSEKVNEGREKVGHNPRRIGENPNP 128
>gi|17227825|ref|NP_484373.1| photosystem I reaction center subunit II [Nostoc sp. PCC 7120]
gi|20139396|sp|P58573.1|PSAD_ANASP RecName: Full=Photosystem I reaction center subunit II
gi|17129674|dbj|BAB72287.1| photosystem I reaction center subunit II [Nostoc sp. PCC 7120]
Length = 139
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 92/123 (74%), Gaps = 2/123 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M +G NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V N RSIG+N +P
Sbjct: 69 LGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPS 127
Query: 198 EHK 200
+ K
Sbjct: 128 QVK 130
>gi|159904239|ref|YP_001551583.1| photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9211]
gi|159889415|gb|ABX09629.1| Photosystem I protein PsaD [Prochlorococcus marinus str. MIT 9211]
Length = 141
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 88/115 (76%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA+M +G NL+ ARKEQCLALGT+L
Sbjct: 14 GSTGGLLNSAETEEKYAITWSSKKSQAFELPTGGAAVMNEGENLMYFARKEQCLALGTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
RS K +I+ Y+ YR+FP G+ ++LHPKDGV+PEKVN GR + N R IG+N +P
Sbjct: 74 RSFKPRIEDYKIYRIFPGGDTEFLHPKDGVFPEKVNEGRSIINHNPRRIGQNPNP 128
>gi|186685227|ref|YP_001868423.1| photosystem I protein PsaD [Nostoc punctiforme PCC 73102]
gi|186467679|gb|ACC83480.1| photosystem I protein PsaD [Nostoc punctiforme PCC 73102]
Length = 141
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL+KA+VEE Y ITW SPKEQ+FE+PTGGAA MR+G NLL +ARKE +
Sbjct: 9 TPLFAGSTGGLLKKAEVEEKYAITWTSPKEQVFELPTGGAATMRKGENLLYIARKEYGIF 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG + K KI Y+ YR+ PNGE LHP DGV+PEKVN GR V R IG+N SP
Sbjct: 69 LGGQQLRKLKITDYKVYRILPNGETTLLHPADGVFPEKVNEGRDKVRYVDRRIGQNPSP 127
>gi|131165|sp|P23808.1|PSAD_FREDI RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 16 kDa polypeptide; Short=PSI-D
gi|97734|pir||S16199 photosystem I protein psaD - Calothrix sp. (PCC 7601)
gi|238433|gb|AAB20252.1| photosystem I (PS I) protein D=psaD protein [Fremyella
diplosiphon=Calothrix sp PCC 7601, Peptide, 138 aa]
Length = 138
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 90/119 (75%), Gaps = 2/119 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M+QG NLL LARKE +A
Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIA 67
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GR+ V R IG+N +P
Sbjct: 68 LGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNP 125
>gi|78185496|ref|YP_377931.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9902]
gi|78169790|gb|ABB26887.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
CC9902]
Length = 143
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
T L+ P I STGGLL A+ EE Y ITW S Q FE+PTGGAA+M G NL
Sbjct: 1 MTASALNGQLPQHI--ASTGGLLNSAETEEKYAITWSSNSAQAFELPTGGAAMMNSGDNL 58
Query: 128 LKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG 184
+ ARKEQCLALGT+LR+K+K + ++ YR++P G+ ++LHPKDGV+ EKVN GR VG
Sbjct: 59 MYFARKEQCLALGTQLRTKFKPRIEDFKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVG 118
Query: 185 VNYRSIGKNVSP 196
N R IG+NV P
Sbjct: 119 HNPRRIGQNVDP 130
>gi|116072591|ref|ZP_01469857.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
BL107]
gi|116064478|gb|EAU70238.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp.
BL107]
Length = 143
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
Query: 68 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNL 127
T L+ P I STGGLL A+ EE Y ITW S Q FE+PTGGAA+M G NL
Sbjct: 1 MTASALNGQLPQHI--ASTGGLLNSAETEEKYAITWSSNSAQAFELPTGGAAMMNSGENL 58
Query: 128 LKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG 184
+ ARKEQCLALGT+LR+K+K + ++ YR++P G+ ++LHPKDGV+ EKVN GR VG
Sbjct: 59 MYFARKEQCLALGTQLRTKFKPRIEDFKIYRIYPGGDTEFLHPKDGVFSEKVNEGRPMVG 118
Query: 185 VNYRSIGKNVSP 196
N R IG+NV P
Sbjct: 119 HNPRRIGQNVDP 130
>gi|86605253|ref|YP_474016.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-3-3Ab]
gi|86553795|gb|ABC98753.1| photosystem I reaction center subunit II [Synechococcus sp.
JA-3-3Ab]
Length = 131
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P+FGGSTGGLL A+ EE YVITW Q+FEMPTGGAA M +G N L ARKEQCLAL
Sbjct: 2 PLFGGSTGGLLSAAETEEKYVITWTGKPGQVFEMPTGGAAEMVEGKNYLTFARKEQCLAL 61
Query: 140 GTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
G +L S++KIK YQ +R+ G+ + +HPKDGV+PEKVN GRQ VG +IGKN P+
Sbjct: 62 GAQLISEFKIKDYQIFRIPAGGQPELVHPKDGVFPEKVNEGRQPVGKVDHNIGKNKEPVT 121
Query: 199 HK 200
+K
Sbjct: 122 YK 123
>gi|37523270|ref|NP_926647.1| photosystem I reaction centre subunit II [Gloeobacter violaceus PCC
7421]
gi|68565770|sp|Q7NF26.1|PSAD_GLOVI RecName: Full=Photosystem I reaction center subunit II
gi|35214274|dbj|BAC91642.1| photosystem I reaction centre subunit II [Gloeobacter violaceus PCC
7421]
Length = 144
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 96/143 (67%), Gaps = 10/143 (6%)
Query: 59 APTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGA 118
A KE P G + +P+FGGSTGGLLRKAQ+EE Y+I W S +EQ+FEMPTGGA
Sbjct: 2 ADVKELPFGGS---------TPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGA 52
Query: 119 AIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVN 177
A M G N+L LARKEQC AL +L S +KI+ + YRV+PNGE + P DGV EK N
Sbjct: 53 ATMVAGTNVLYLARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSN 112
Query: 178 PGRQGVGVNYRSIGKNVSPIEHK 200
PGR+ VG R IG N +P++ K
Sbjct: 113 PGREVVGYVPRKIGDNPNPVDVK 135
>gi|427706794|ref|YP_007049171.1| photosystem I protein PsaD [Nostoc sp. PCC 7107]
gi|427359299|gb|AFY42021.1| photosystem I protein PsaD [Nostoc sp. PCC 7107]
Length = 139
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA+ EE Y ITW SPK Q+FE+PTGGAA M QG NLL LARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAKEEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEYGIA 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V R IG+N P
Sbjct: 69 LGGQLR-KFKITDYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRHVPRRIGQNPEP 126
>gi|427724047|ref|YP_007071324.1| photosystem I protein PsaD [Leptolyngbya sp. PCC 7376]
gi|427355767|gb|AFY38490.1| photosystem I protein PsaD [Leptolyngbya sp. PCC 7376]
Length = 142
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P FGGSTGGLL A EE Y ITW S EQ+FE+PTGGAAIM G NL+ ARKEQCLA
Sbjct: 9 TPKFGGSTGGLLSAADREEKYAITWSSKSEQVFELPTGGAAIMNSGDNLMYFARKEQCLA 68
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVS 195
LGT+L+++ K K Y+ YRV+P+GE Q+L+P DG EKVN GR+ G R+IG N
Sbjct: 69 LGTQLKTQLKPKIRDYKIYRVYPSGETQFLYPLDGKPSEKVNEGREYNGKVARNIGSNPE 128
Query: 196 PIEHK 200
P + K
Sbjct: 129 PAKLK 133
>gi|33241182|ref|NP_876124.1| photosystem I protein PsaD [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33238712|gb|AAQ00777.1| Photosystem I reaction center subunit II PsaD [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 141
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y ITW S K Q FE+PTGGAA+M +G N++ ARKEQCLALGT+
Sbjct: 14 GSTGGLLNSAETEEKYAITWTSKKSQAFELPTGGAAMMNEGENIMYFARKEQCLALGTQF 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
R K +I+ ++ YR+FP G+ +YLHPKDGV+PEKVN GR N R IG+N +P
Sbjct: 74 RGFKPRIEDFKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPITNHNPRRIGQNPNP 128
>gi|428209652|ref|YP_007094005.1| photosystem I protein PsaD [Chroococcidiopsis thermalis PCC 7203]
gi|428011573|gb|AFY90136.1| photosystem I protein PsaD [Chroococcidiopsis thermalis PCC 7203]
Length = 142
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+PIFGG TGGLL KA+ EE YVITW SPKEQ+FEMPTGG+AIMRQG N L++ARKE +A
Sbjct: 9 TPIFGGGTGGLLTKAEREEKYVITWTSPKEQVFEMPTGGSAIMRQGKNKLEIARKEYGIA 68
Query: 139 L-GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
L G +LR+K+KI Y+ YRV+PNGE Q +HP DGV+PEKVN GR V R+IG N SP
Sbjct: 69 LGGQQLRAKFKINDYKIYRVYPNGETQMIHPADGVFPEKVNQGRPKVRYVDRNIGSNPSP 128
Query: 197 IEHK 200
+ K
Sbjct: 129 AKLK 132
>gi|284928840|ref|YP_003421362.1| photosystem I reaction center subunit II PsaD [cyanobacterium
UCYN-A]
gi|284809299|gb|ADB95004.1| photosystem I reaction center subunit II (PsaD) [cyanobacterium
UCYN-A]
Length = 142
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 82/124 (66%), Gaps = 3/124 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
PIFGGSTGGLL A +EE Y ITW S EQ+FEMPTGGAAIM G NLL LA KEQCLAL
Sbjct: 10 PIFGGSTGGLLSSAYLEEKYAITWSSGTEQVFEMPTGGAAIMNVGANLLHLATKEQCLAL 69
Query: 140 GTRLRSKYK---IKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSP 196
G +L++K++ Y+ YRVFP+G Q L+P DGV E GR G R IG N P
Sbjct: 70 GKQLQTKFEPIIESYKVYRVFPDGNAQLLYPIDGVASEVAKEGRSYAGKVDRKIGANPEP 129
Query: 197 IEHK 200
+ K
Sbjct: 130 VTLK 133
>gi|301500982|ref|YP_003795447.1| photosystem I subunit II [Alveolata sp. CCMP3155]
gi|300069528|gb|ADJ66635.1| photosystem I subunit II (chloroplast) [Chromerida sp. RM11]
Length = 121
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 85 STGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLR 144
TGG LR EE YVITW SP+ Q+FE+PTGG MRQG NL+ ARKEQC+++G +LR
Sbjct: 10 GTGGWLRTGGEEERYVITWASPRTQLFELPTGGCEFMRQGKNLITFARKEQCISIGKQLR 69
Query: 145 SKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGK 192
+ +KI Y+ +RV PNG+V LHPKDGV+PEKVN GR VG +IGK
Sbjct: 70 TNFKINDYKIFRVLPNGQVVLLHPKDGVFPEKVNTGRVLVGAMEANIGK 118
>gi|428217120|ref|YP_007101585.1| photosystem I protein PsaD [Pseudanabaena sp. PCC 7367]
gi|427988902|gb|AFY69157.1| photosystem I protein PsaD [Pseudanabaena sp. PCC 7367]
Length = 148
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 97/144 (67%), Gaps = 11/144 (7%)
Query: 55 EKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMP 114
E+T+ +EAP P P++GGSTGGLL A EE Y+ITW S KEQ+FEMP
Sbjct: 3 EETQEVQQEAP---------PEAKVPVWGGSTGGLLGSASTEEKYLITWTSKKEQVFEMP 53
Query: 115 TGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYP 173
T GAA M G N+L A+KEQ LALGT+LR K+KI Y+ R FPNG+ +LHPKDGV+P
Sbjct: 54 TAGAATMHAGANILSFAKKEQALALGTQLR-KFKITDYRISREFPNGDTVHLHPKDGVFP 112
Query: 174 EKVNPGRQGVGVNYRSIGKNVSPI 197
E+VN GR+ VG R IG N +PI
Sbjct: 113 ERVNEGREQVGTKMRKIGDNPNPI 136
>gi|435856181|ref|YP_007317065.1| photosystem I reaction center subunit II (chloroplast)
[Nannochloropsis gaditana]
gi|429126105|gb|AFZ64276.1| photosystem I reaction center subunit II (chloroplast)
[Nannochloropsis gaditana]
Length = 136
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLAL 139
P F GSTGG L A+ EE YVI W S +FEMPTGG A M G N+ ARKEQCLAL
Sbjct: 11 PKFEGSTGGWLSAAKNEEKYVIIWTSKDASLFEMPTGGTAKMNAGNNVAYFARKEQCLAL 70
Query: 140 GTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIE 198
GT+LR K+KI Y+ +R++P ++ LHP DGV+PEKVN GR VG SIG N +P
Sbjct: 71 GTQLR-KFKITNYKIFRIYPPLDITLLHPFDGVFPEKVNEGRSPVGKRDASIGGNPNPAS 129
Query: 199 HK 200
K
Sbjct: 130 LK 131
>gi|79657|pir||PL0034 photosystem I chain II - Synechococcus sp. (PCC 6301) (fragment)
Length = 98
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LA
Sbjct: 8 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 67
Query: 139 LGTRLRSKYKIK---YQFYRVFPNGEVQYL 165
LGT+LR+K+K K Y+ Y VFP G+V+YL
Sbjct: 68 LGTQLRTKFKPKIESYKIYDVFPGGDVEYL 97
>gi|72382988|ref|YP_292343.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL2A]
gi|124026729|ref|YP_001015844.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL1A]
gi|72002838|gb|AAZ58640.1| photosystem I protein PsaD [Prochlorococcus marinus str. NATL2A]
gi|123961797|gb|ABM76580.1| Photosystem I protein PsaD [Prochlorococcus marinus str. NATL1A]
Length = 141
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 82/124 (66%), Gaps = 2/124 (1%)
Query: 84 GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRL 143
GSTGGLL A+ EE Y ITW S +FE+PTGGAA+M +G NL+ ARKEQC AL T+L
Sbjct: 14 GSTGGLLNSAETEEKYAITWTSKTSGVFELPTGGAAVMHEGDNLMYFARKEQCFALNTQL 73
Query: 144 RS-KYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEHKT 201
R K +I+ + YR++P G+ + L PKDGV+ EK N GR G N R IG+N +P K
Sbjct: 74 RGFKPRIETSKIYRIYPGGDRELLFPKDGVFSEKPNEGRLKEGYNNRRIGENPNPASLKF 133
Query: 202 ELKK 205
KK
Sbjct: 134 SGKK 137
>gi|428298010|ref|YP_007136316.1| photosystem I protein PsaD [Calothrix sp. PCC 6303]
gi|428234554|gb|AFZ00344.1| photosystem I protein PsaD [Calothrix sp. PCC 6303]
Length = 140
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGG TGGLL KA+VEE Y ITW SPK+Q+FE+PTGG A M +G NLL +ARKE +
Sbjct: 9 APLFGGGTGGLLTKAEVEEKYAITWTSPKKQVFELPTGGVATMNEGENLLYIARKEYGIF 68
Query: 139 LGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPI 197
LG + K KI Y+ YR+ PNGE +HP DG +PEKV GRQ VG R IG+N S
Sbjct: 69 LGGQQLRKMKITDYKIYRILPNGETTKIHPADGNFPEKVTEGRQKVGAIPRRIGENPSAA 128
Query: 198 EHKTELKK 205
+ K KK
Sbjct: 129 KIKFSGKK 136
>gi|148245902|gb|ABQ52912.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245907|gb|ABQ52914.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245909|gb|ABQ52915.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245911|gb|ABQ52916.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245913|gb|ABQ52917.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245915|gb|ABQ52918.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245919|gb|ABQ52920.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245921|gb|ABQ52921.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245925|gb|ABQ52923.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245929|gb|ABQ52925.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
gi|148245935|gb|ABQ52928.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245905|gb|ABQ52913.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKVYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245917|gb|ABQ52919.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPVDGVFPEKV 74
>gi|148245931|gb|ABQ52926.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGETQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245933|gb|ABQ52927.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAI+ +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAILNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245900|gb|ABQ52911.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQAFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245927|gb|ABQ52924.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNGGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|169840510|gb|ACA96900.1| chloroplast photosystem I subunit D-2 [Oenothera grandiflora]
Length = 94
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 74/99 (74%), Gaps = 8/99 (8%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEE-KTEA 59
MATQA +FTPS+ ++ + PWK +SS SF + K + FS RT+RAAAA E TEA
Sbjct: 1 MATQASIFTPSL--NSGDRVAIIPWKASSSVSFNTTKTIKFS---RTIRAAAAAEGSTEA 55
Query: 60 PTKE--APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVE 96
PTKE APVGFTPP+LDP TPSPIF GSTGGLLRKAQVE
Sbjct: 56 PTKEKAAPVGFTPPELDPTTPSPIFAGSTGGLLRKAQVE 94
>gi|148245939|gb|ABQ52930.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
Query: 108 EQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQY 164
EQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y YRV+P+GE+QY
Sbjct: 3 EQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYTIYRVYPSGEIQY 62
Query: 165 LHPKDGVYPEKV 176
LHP DGV+PEKV
Sbjct: 63 LHPADGVFPEKV 74
>gi|148245941|gb|ABQ52931.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFY---RVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Q Y RV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKICRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245923|gb|ABQ52922.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEM TGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMHTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245937|gb|ABQ52929.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K + Y+ Y V+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPRIQDYKIYCVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245943|gb|ABQ52932.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G N L LARKEQCLALGT+LR+K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENPLYLARKEQCLALGTQLRTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|148245898|gb|ABQ52910.1| photosystem I reaction center subunit II [uncultured marine
microorganism]
Length = 74
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 107 KEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQ 163
KEQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+L +K+K + Y+ YRV+P+GE+Q
Sbjct: 2 KEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLWTKFKPRIQDYKIYRVYPSGEIQ 61
Query: 164 YLHPKDGVYPEKV 176
YLHP DGV+PEKV
Sbjct: 62 YLHPADGVFPEKV 74
>gi|226903580|gb|ACO90365.1| PsaD [uncultured virus]
Length = 121
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 97 EFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 153
E Y ITW+S KEQ FE+PTGGAAIM +G N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 42 ETYAITWKSIKEQAFELPTGGAAIMHEGDNIMYFARKEQCLALGTQFKTDIKPKIKDYKI 101
Query: 154 YRVFPNGEVQYLHPKDGV 171
YRV+ NGE+++L+PKDGV
Sbjct: 102 YRVYQNGEIEFLYPKDGV 119
>gi|169840506|gb|ACA96898.1| chloroplast photosystem I subunit D-2 [Oenothera elata subsp.
hookeri]
Length = 84
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 19 KLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEE-KTEAPTKE--APVGFTPPQLDP 75
++ + PWK +SS SF + K + FS RT+RAAAA E TEAPTKE APVGFTPP+LDP
Sbjct: 7 RVAIIPWKASSSVSFNTTKTIKFS---RTIRAAAASEGSTEAPTKEKVAPVGFTPPELDP 63
Query: 76 NTPSPIFGGSTGGLLRKAQVE 96
TPSPIF GSTGGLLRKAQVE
Sbjct: 64 TTPSPIFAGSTGGLLRKAQVE 84
>gi|195549718|gb|ACG50087.1| PsaD [uncultured virus]
Length = 126
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Query: 97 EFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 153
E Y ITW SPKEQ FE+PTGGAA+M +G N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 41 ETYAITWNSPKEQGFELPTGGAALMNEGDNIMYFARKEQCLALGTQFKTDLKPKIKDYKI 100
Query: 154 YRVFPNGEVQYLHPKDGV 171
YR+ +G V++L+PKDGV
Sbjct: 101 YRILKDGTVEFLYPKDGV 118
>gi|169840508|gb|ACA96899.1| chloroplast photosystem I subunit D-2 [Oenothera elata subsp.
hookeri]
Length = 82
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 19 KLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEE-KTEAPTKE--APVGFTPPQLDP 75
++ + PWK +SS SF + K + FS RT+RAAAA E TEAPTKE APVGFTPP+LDP
Sbjct: 5 RVAIIPWKASSSVSFNTTKTIKFS---RTIRAAAASEGSTEAPTKEKVAPVGFTPPELDP 61
Query: 76 NTPSPIFGGSTGGLLRKAQVE 96
TPSPIF GSTGGLLRKAQVE
Sbjct: 62 TTPSPIFAGSTGGLLRKAQVE 82
>gi|169840512|gb|ACA96901.1| chloroplast photosystem I subunit D-2 [Oenothera grandiflora]
Length = 82
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 19 KLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAAAEE-KTEAPTKE--APVGFTPPQLDP 75
++ + PWK +SS SF + K + FS RT+RAAAA E TEAPTKE APVGFTPP+LDP
Sbjct: 5 RVAIIPWKASSSVSFNTTKTIKFS---RTIRAAAAAEGSTEAPTKEKAAPVGFTPPELDP 61
Query: 76 NTPSPIFGGSTGGLLRKAQVE 96
TPSPIF GSTGGLLRKAQVE
Sbjct: 62 TTPSPIFAGSTGGLLRKAQVE 82
>gi|56750552|ref|YP_171253.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 6301]
gi|56685511|dbj|BAD78733.1| photosystem I reaction center subunit II [Synechococcus elongatus
PCC 6301]
Length = 108
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LA
Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 68
Query: 139 L 139
L
Sbjct: 69 L 69
>gi|326511180|dbj|BAJ87604.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 96/206 (46%), Gaps = 50/206 (24%)
Query: 1 MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTFSMAQRTVRAAA-------- 52
MATQA T +IT W P++ P+P T +M + R A
Sbjct: 3 MATQASAATRHLITAA--------WSPSAK-----PRPATLAMPS-SARGPAPLFAAAPD 48
Query: 53 AEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFE 112
P + AP GF PPQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SP+ Q
Sbjct: 49 TPAPAAPPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPRTQAEA 108
Query: 113 MPTG--------------------GAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQ 152
G GAA+ G L+ AR Q AL R ++ +
Sbjct: 109 KKNGDGEEEGPRARVPAPPEAGSPGAALPLVG--GLRRARPPQLAALRARGGAQ-----E 161
Query: 153 FYRVFPNGEVQYLHPKDGVYPEKVNP 178
FP G + +D V+P+ V+P
Sbjct: 162 PRPPFPMGSARRAE-EDHVHPDAVDP 186
>gi|253721896|gb|ACT34029.1| PsaD [uncultured marine virus]
Length = 118
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 97 EFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQF 153
E Y ITW S KE FE+PTGGAA+M +G N++ ARKEQCLALGT+ ++ K K Y+
Sbjct: 41 ETYAITWTSKKEMGFELPTGGAALMNEGDNIMYFARKEQCLALGTQFKTDLKPKIKDYKI 100
Query: 154 YRVFPNGEVQY 164
YR+ +G V++
Sbjct: 101 YRILRDGTVEF 111
>gi|308812229|ref|XP_003083422.1| PSI reaction center, subunit II (ISS) [Ostreococcus tauri]
gi|116055302|emb|CAL57698.1| PSI reaction center, subunit II (ISS) [Ostreococcus tauri]
Length = 82
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Query: 48 VRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEE 97
VRA A+ KTE+ AP +T P+LDPNTPSPIFGGSTGGLLRKAQV
Sbjct: 32 VRAEEAKAKTES---AAPAVWTAPKLDPNTPSPIFGGSTGGLLRKAQVRH 78
>gi|68565661|sp|P84563.1|PSAD_POPEU RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 20 kDa subunit; Short=PSI-D
Length = 29
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 63 EAPVGFTPPQLDPNTPSPIFGGSTGGLLR 91
EAPVGFTPP+LDP+TPSPIFGGSTGGLLR
Sbjct: 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR 29
>gi|131168|sp|P20117.1|PSAD_PEA RecName: Full=Photosystem I reaction center subunit II; AltName:
Full=Photosystem I 21 kDa subunit; Short=PSI-D
Length = 36
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 57 TEAPTKEAPVGFTPPQLDPNTPSPIFG 83
T+ T EAPVGFTP +LDPNT S IFG
Sbjct: 10 TDVATXEAPVGFTPXELDPNTXSXIFG 36
>gi|544747|gb|AAB29525.1| PSI-D2=18.5 kda photosystem I psaD product {N-terminal}
[Nicotiana tabacum, leaves, Peptide Chloroplast
Partial, 34 aa]
Length = 34
Score = 40.4 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 19/20 (95%), Positives = 19/20 (95%)
Query: 65 PVGFTPPQLDPNTPSPIFGG 84
PVGFTPPQLDPNTPS IFGG
Sbjct: 15 PVGFTPPQLDPNTPSXIFGG 34
>gi|478509|pir||PQ0669 photosystem I 17.5K D2 chain - common tobacco (fragment)
gi|544746|gb|AAB29524.1| PSI-D2=17.5 kda photosystem I psaD product {N-terminal}
[Nicotiana sylvestris, leaves, Peptide Chloroplast
Partial, 30 aa]
Length = 30
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/19 (94%), Positives = 18/19 (94%)
Query: 65 PVGFTPPQLDPNTPSPIFG 83
PVGFTPPQLDPNTPS IFG
Sbjct: 12 PVGFTPPQLDPNTPSXIFG 30
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,917,367,663
Number of Sequences: 23463169
Number of extensions: 175568373
Number of successful extensions: 468238
Number of sequences better than 100.0: 262
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 467724
Number of HSP's gapped (non-prelim): 372
length of query: 229
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 91
effective length of database: 9,121,278,045
effective search space: 830036302095
effective search space used: 830036302095
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)